MELO3C007952.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C007952.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionF-box protein SKIP23
Locationchr08 : 6443260 .. 6449888 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAAGCATCCAAACATTCCACGTTAATGATTCTCCTCCAAGCTTTAGAACTTATTAAATAAAACATTCCACATTGTTGAACAAAAATAAGAAACGAAAACAAAAACAAAGATGGAGTTAGTGCCATGAACATGGGCTTAATCTCTGAAGCCCATTCCCAACCCTTTCAAAATTCCTAACAAAACCGCCAAAATTACTTATTTACTAAAAGGAAGCCGGAGCAGATTCTTCTCCCTCCCATGGAGGACAACTCTACACGGTGGTCCGATCTCCATACTGAACTTTGGACGGCCATCGTTACTTGCTTGTTTTCCTCCTTTCAACTCCGTTGCTACTCTTCTACTTCTCCACCTCCCTTCTCTTCCCAACCACCTCGACGCCGATCATACATTCGAACACATTTTTCTCGCTCGAAATATAATTAATCGCTTCAGTCTCTCTTCATCACCATTTTATGCAGCAGAGGCGGCGAATATTTGGTTTGCGATTTCTGCGTCCGTTATACCTCTCCAATCTTAAATTCACTTTTGTAACCCTTCCACATGAAATCAATTTACTGGAATTTCGAATTCACGAATTGGCTAAATTGTATATGCTTGTAAATACGGAAGGTGTTTGTGTTTCTGAAATTAGTAAGGTCGTAACGTTCCCTGATTCTTCTTGGATCGATACGAAGAATTGCATCGCTTTTGCGATTTTTGTAGATGGAAAATTAAGATTCACGAAACTTACGGATGAGAAATGGACGATGATTGAGAAACATAATTTTGCCTGCGGTGATGTGATTGCATACGGGGGAAAGTTCTATGCAGTTGATAGAAGAGGAAAAGTTTTCTCGGTCGATTCATCGTCGATGGAATTGTCACAAATTTCTCTTCCGATGAGTGGCTTTGGTAAACAGAAACATCTGGTGGAGTGCGGCGGCGAGGTTTATATGGTAGATCGATTATATGATTTCAGTGACAGTGATGATGATGGTGGTGGTGGTGGTGGTGGTGGTGAGAGTGAGAGTGAGGAAGAGGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAGGCTGATTTCAAAGTGTATTGAGTGGATTTGAATGGAGAATACAATAGAAGGAATTGGAGGAGGTGAAGAATTTGGGGAATGATGCGGGAAGGTAGTTTCTCAACGGCTACAGAATTTGAAGGAATTGAATATATTATCCTCGAAGAAGAATGATGTAGAATGGATTCTGAAATGATGAACGACAAACAATGCTCCATCGTCATCAATTTTGATTAGTACGTTTACTCGCTGTTTCTGTCTTCTTCTACTACGAATTAGGGTTTCTGCATCAATCTTCATCTTCAATTTACAATTTTGGAGTCTAGTTTAGCATGAGAATCAAGATTTCCAAAACCCTAAATGCATTGTCACTTTTTTTAAAATCAATTTTCTAAGCATATGCTATAGATTTATATATATATATGTATATATGTATATGTATATACGTATATGTATATATGTATATATGTATATATATGTGTATATATATTGATGATGATTTTTTCTCTTTATTGAGGTTTTTGTTCTTAAACTTTCTATGCATTTTATATGCTTTATGCTGTTCTGTTTAGATGCTCATGACTTAGATTGAGGAATTTCTAATTCAAATAATTTCAAATAAATTTTGCTCTTTGTTTTCACAAGAAAGAGTGTAATTCATATATATAAAGCCTAATTTTGTAGGATTAGTTCTTCATTACTTTTTTTTTTCTTGAAAACAAATCAATAATATTAAAGGAAATTACTATATATGCAAATAAATACAGTCATTTCTCAACTTTGGAATTATACAATTTAAGATTATTCACAAACTTTTCTAATTTGTTGGAGGGTTGCTTTTTTTTTTCTTTTTTTTTTTTAATTTAAACTTGGTTGGTATTATTAGATAAAGAATTATTATGGTTTTTGAACTATGTAAGAATAACTTAGGGATTCATGTAAAAAAAAAAAAAAAAAGACCGTAACATATACTCCCTGTACTTTATGTTTTATTAATCTTAAATGTCCAATTCTAATATCTATATCCACAAATCTTAAGTCAGTCCTTAAAATTATTTTATGGTAGAATTTTTTTCCAAAAACTTTAGTCTGTTATAATGAAAATTATTTTTATGGATAAAAGTTTAACTTTGAAGTACTGCATTTATTTTATGTTTATTTTATGTTTACTACATTTACGATATATTATTTTAAGTATGAGAGTAATTCAAGGTATTTTAACCCAAAAGTAAAATATAAATAAAATCATTCTACGGATTTGAGGAGCATTGGTGGAAAGTAGTAGTGGGTAGTCGATGTTGTAACCTTGGAAACAATTTAACTATTTTTTAAACCAAATGGCAAAGTGGAATAGCCAGTGATAAAATATTCTCGAAATTTACGATTTTTCTTTTCTAACTTGAAACATGAATGATGATGACAGAGTTCATTCGAGTATAGTGATAGTCGAGAGGAATACCAATGTTATCATTATCTAAGAACTGAATGCTTATACTTACAGGAAGAAACAATCTAAATATAGATTACAATACATAGCAGAAGTTAGGAATGAGTGGGAGTCAAATATTTCTTAAATGCATTTGTAGATTGATGAGCAAAATACTTTTGGCGAAGAATTACATAGGGATAACTTAGGAATGATAATATGTGGGCAGGCTTTGAGATTGATAGAATTTCATACCACACTTGACTGTTTGAGTCCATCTCAATTGAAAACCGTTCTTCACCAGCCTAAAATTATGAAAGTTAAGAACATGTTAGTACATTTAGAGGATCTAGAGTGAGATTAAAAAGTTTTTCGCTTGGAAGAAATGAATGGTGGATTGTGTTGTCTAGAAGATGCAGATAGTCTGAGTGAAGTATTTAGGAATTTTGGGACAGATTGCGATCTTGTTCTTAATAGAAGTCTCTACTTCCTATATGTGTACGAAAAGAGAAACCTGGTTAAAGACTTCATACTTTAGTGTGCATGGACTAAATATTGTAAGTTGGTACCAGACCTGTAAGAAAAACCTAGGAAGCACGGACACTCTAATTTGGCTAGTTTGCATGTCCAATCCTTGTTGGATACATATCGAACACTTGTTTATACAATAGATATGTTATATATTAATGGTACACAATCTAAGTATGTTCATTGTGTTCTTCCTGTGTCCGTGGCCAAGATTTTAAAAATACGACCTTTCACCGGGCTCCTGTCATGTAGCTTTTAAGGGAGAAACTTCCTCTAAGAAAGGAAATTGACGACTATATGAGATCCGATCTGTAATAATTGCATTGAGCAATAATAAAATATGTAATAAAATATGTAGCTTTTAAGGGAGAAACTTTCAATTGACTATACATCCCAGTCGTCAAGGAAAGACATTGACTAAACACTTCAAAATCACACCATTGAGCAATAATTGCATGAAATCCCAACTCTAATTGCACAACTATGGCTGATTATTTGCAAGATAAGTATCTGTAAGTAAGCTAACAAGCAAATGAGGAAGAAAGAGGAAGAAAGAGGAAGAAGGAACGACTAACCAGAAGATGGCCTTGAAGGGTACCACTGCCAAAACTGAAGCATGTCCTACCCTTATTGGTATTTCTATTCTCATTTACATACACAATTTGAAGAGGCAACACCACCCATGGAAGGAACTCCTTGGCACAGACACAAAACTTCACTCCTGGATGAACTGGAGTTGAGGAATCAACAAATGCCCAATTCAATCCAAAATGCCTACAAAAAATTTGAGGTGGATTAAAGGATTCATCTAATAATAGATTACTCTTATCCAATAAGCATATTAGCCATTATCCAACCTCCAGTTCTGAAGAGCTTTCTTCCCTTTTTCATAAGTCTCAACACCAGAACCCACCAAAATACGAGCATGGTTGAGAAGAAAACCTTCTTGTGAGATCCCCTTATCTTCTTGCAGGCAAGAACTGGGATTAGCAGTAGCTCCTCTAAACTTGCTGCTATAGTTGAAGGAACCAGCCCTATTGATCAACATCATGTAATACTCCACTCAGACAAAAAATAACAAACAAACAAACATATACGTATGGAGTTTTTCATTCCGGAGACATATTCTCAATTCCCTACATGATTAATGCCTCTCCTCTTATAAACATATAAAATTTAACCTTCTTCTACTTACATTAAAGTGCATTATCTATAGCAGCCCTAAGATCCTTATTTTTCTCACACTTTGTTTGCTTTCACCGTGAATATTGCACTTGAGTGGAGAAAAAATTAGGATCGTGATAGTTATAATAGATATGTTGCATCCCGAATGCAACACTGCACTTAGACGTAAGCAGAAGGTTAGATTTCATAAGCTCGTAGTTACTGATGATTAATCATGCAGGAAAATGAGAATAAGTCATCCATACAAAAATCTCATCTCCTGTGTGAAACTTTTTCTTGTGAGGGGTGGGGTTTTTCAATCCCATTGTTCTTGCCTTTCAATGCAGGCCTTCTGCTCTTGAGGAGACGGGCGAGACCAACACAAGAACACCATCTTTATCAAAAACAACAGCAACACCCTTCAAATAAAACTAATTAAAACAAACAAACAAACAAACGATCTAGGGTTTTAGTAGTTGCCTTCAGACTAAACTAAAGAGTTCCCATAACAACAAAAAGAAATAGGAACCCTCAAGAACGAAATCTGAAGTGCACTGAGACTTTGTGGTAGATGAAATTTGGGACAAACTGCTAAAAAATTAGAACCTAATAGACGAATAAAATACTACAAAAATCATAATAATTTTGAGGTGCGTCGATTGATTCTTCCGACGAAATAGAAGCAGAAGCAAATAAAAAGTTGAGAGATTGAAGAAGACGTTGGTAAGAAGAGAGGTGGAGTTGAAGAAGAAACATACCCAACAGCAATTACTTTAGCTATCGGAGTTTTTTTGAATCGAAAGCTTAGAAGAGAGCAGCAGAAATTTTAGTTAGCGAAGAAGAGAGCTATGAGTCGACGTGTAGTTCTCAGTAGGTTCAGTCCAGACGACTTGTAGTTCAAAGTTGAGAATTTTTACGCCATCGTTGGTTCCAAAGTCAAAATTTTGGAGTCTTCGTAACAAAAATAGGGTACCGTACTTTTTTTTTTTTAAAAGATATTTAATATATATTTATTTTTAAAAAAATTAATTTTCCAAAAATATCTTTTTTTATTAAATATTTTTCAAATTCTAATTTTTAATTTTTAAAAATACGTTTTCTTATTAAATATATTTTCAATTTCCTTATTAGTAAAATTTTAAATTAAGCCCATTGATTCCTATCATTGATAGAATACATTGATATATGTTGTAAATAATTTAGTTTATTTAACTATGTTTGAAAATGTCCCTATTTTATAAACATTTTAGTAGAATTTTTCTATATTTAAAAAATAGATCTTATTATAATATAATACATGATATGACTATTGTATTTATTTTCTCTTTACAAATTAAGAGTTTTTATATTTTGTAATAATATAATAGTGATATAGCTCAAACCACTAAAACAATGGCCATACGTTGGATCTCTAACTAACATGTCGAATTTTGTCTCCTTTGAGGAAAAGGTAAAATATCCATATTTTACTAATAAATAGATATGTTGTCATTAAAACTTGTCTAATAAAATTGAGCTTTTGCGTCTAAGAGATCAACAAATATTTGGACTCTAATATAATGTTGGATGGTATAGAGTTAATATAGAGTTCCATCTCAAAACTAATTGACAAGAAGATGAATAACTCACGTGAATCTACTAGGTTTCTCTAATGTGAAACTCTCAACATCTCCAACAATTTGAGATTGTAAAATTAAACTTATTCCTGAATAATTTTAACCTATCAAAAGTTATTTTAAACATTTTAAAATCTCCCAAGACATCGTACCTTTAATCTTTAATATATTCCACCTGTATATCTTACAACCATCTAAACTTATTTTAATATGCCAAAGTAACCAATATAACCTTACATATCAAAGCATCCAATACTCCAAGACCAACCACTTATGAATCGATTAATGAAAGTGAAGTTTTTGGAACAATAATTAATCTCACAAGAATTGATCTACACTCTACTCGTAAAGGACAACTAATTTAAAATAAATTTCTAGCATTTGTATTTTTCATATCTACATCAAGAAGAGCAAAAGTAAGACTCTGAACTGATTAACCTATTCCCTTGATGAGTGATCGAGGTGGCTAACTTTGCTGGGTATTAATTAATAACCATGTAATGAAGTGATTAGATATGTATATACTTATCTATAGATGCCTACCGAATTGATATAAACAGAAGGAAAATATAAAAGGATGTTTTAACTTATCCCATCAGCCTCAAATCCTGAAATTTCCGCAAGTTCTGATAGTTCTTTCTCCCCACTCAAAACCTGCAGGAAACATGAATTTGATGATACAAAAAGAAGTACAAACAGCCCAGCCAAGAGAGGAAGGAAGCACAAGGACTTTCATTTATTTTCATGTAACTGCTTGTGGAAGTTTTCTTAGGAATCAAAGACACATATGTTGTACAACCTATAGAATAGATTCTTTTCAAGTAAGGTCGTGCTTGGGGAAGTTTCCTATTGCTCCATAAAC

mRNA sequence

CCAAAGCATCCAAACATTCCACGTTAATGATTCTCCTCCAAGCTTTAGAACTTATTAAATAAAACATTCCACATTGTTGAACAAAAATAAGAAACGAAAACAAAAACAAAGATGGAGTTAGTGCCATGAACATGGGCTTAATCTCTGAAGCCCATTCCCAACCCTTTCAAAATTCCTAACAAAACCGCCAAAATTACTTATTTACTAAAAGGAAGCCGGAGCAGATTCTTCTCCCTCCCATGGAGGACAACTCTACACGGTGGTCCGATCTCCATACTGAACTTTGGACGGCCATCGTTACTTGCTTGTTTTCCTCCTTTCAACTCCGTTGCTACTCTTCTACTTCTCCACCTCCCTTCTCTTCCCAACCACCTCGACGCCGATCATACATTCGAACACATTTTTCTCGCTCGAAATATAATTAATCGCTTCAGTCTCTCTTCATCACCATTTTATGCAGCAGAGGCGGCGAATATTTGGTTTGCGATTTCTGCGTCCGTTATACCTCTCCAATCTTAAATTCACTTTTGTAACCCTTCCACATGAAATCAATTTACTGGAATTTCGAATTCACGAATTGGCTAAATTGTATATGCTTGTAAATACGGAAGGTGTTTGTGTTTCTGAAATTAGTAAGGTCGTAACGTTCCCTGATTCTTCTTGGATCGATACGAAGAATTGCATCGCTTTTGCGATTTTTGTAGATGGAAAATTAAGATTCACGAAACTTACGGATGAGAAATGGACGATGATTGAGAAACATAATTTTGCCTGCGGTGATGTGATTGCATACGGGGGAAAGTTCTATGCAGTTGATAGAAGAGGAAAAGTTTTCTCGGTCGATTCATCGTCGATGGAATTGTCACAAATTTCTCTTCCGATGAGTGGCTTTGGTAAACAGAAACATCTGGTGGAGTGCGGCGGCGAGGTTTATATGGTAGATCGATTATATGATTTCAGTGACAGTGATGATGATGGTGGTGGTGGTGGTGGTGGTGGTGAGAGTGAGAGTGAGGAAGAGGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAGGCTGATTTCAAAGTGTATTGAGTGGATTTGAATGGAGAATACAATAGAAGGAATTGGAGGAGGTGAAGAATTTGGGGAATGATGCGGGAAGGTAGTTTCTCAACGGCTACAGAATTTGAAGGAATTGAATATATTATCCTCGAAGAAGAATGATGTAGAATGGATTCTGAAATGATGAACGACAAACAATGCTCCATCGTCATCAATTTTGATTAGAAACATGAATTTGATGATACAAAAAGAAGTACAAACAGCCCAGCCAAGAGAGGAAGGAAGCACAAGGACTTTCATTTATTTTCATGTAACTGCTTGTGGAAGTTTTCTTAGGAATCAAAGACACATATGTTGTACAACCTATAGAATAGATTCTTTTCAAGTAAGGTCGTGCTTGGGGAAGTTTCCTATTGCTCCATAAAC

Coding sequence (CDS)

ATGCAGCAGAGGCGGCGAATATTTGGTTTGCGATTTCTGCGTCCGTTATACCTCTCCAATCTTAAATTCACTTTTGTAACCCTTCCACATGAAATCAATTTACTGGAATTTCGAATTCACGAATTGGCTAAATTGTATATGCTTGTAAATACGGAAGGTGTTTGTGTTTCTGAAATTAGTAAGGTCGTAACGTTCCCTGATTCTTCTTGGATCGATACGAAGAATTGCATCGCTTTTGCGATTTTTGTAGATGGAAAATTAAGATTCACGAAACTTACGGATGAGAAATGGACGATGATTGAGAAACATAATTTTGCCTGCGGTGATGTGATTGCATACGGGGGAAAGTTCTATGCAGTTGATAGAAGAGGAAAAGTTTTCTCGGTCGATTCATCGTCGATGGAATTGTCACAAATTTCTCTTCCGATGAGTGGCTTTGGTAAACAGAAACATCTGGTGGAGTGCGGCGGCGAGGTTTATATGGTAGATCGATTATATGATTTCAGTGACAGTGATGATGATGGTGGTGGTGGTGGTGGTGGTGGTGAGAGTGAGAGTGAGGAAGAGGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAGGCTGATTTCAAAGTGTATTGA

Protein sequence

MQQRRRIFGLRFLRPLYLSNLKFTFVTLPHEINLLEFRIHELAKLYMLVNTEGVCVSEISKVVTFPDSSWIDTKNCIAFAIFVDGKLRFTKLTDEKWTMIEKHNFACGDVIAYGGKFYAVDRRGKVFSVDSSSMELSQISLPMSGFGKQKHLVECGGEVYMVDRLYDFSDSDDDGGGGGGGGESESEEEEDEEEEEEEEEADFKVY
Homology
[Close]
BLAST of MELO3C007952.2 vs. NCBI nr
Match: XP_016899307.1 (PREDICTED: F-box protein SKIP23-like [Cucumis melo])

HSP 1 Score: 345.5 bits (885), Expect = 1.2e-91
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1   MQQRRRIFGLRFLRPLYLSNLKFTFVTLPHEINLLEFRIHELAKLYMLVNTEGVCVSEIS 60
           MQQRRRIFGLRFLRPLYLSNLKFTFVTLPHEINLLEFRIHELAKLYMLVNTEGVCVSEIS
Sbjct: 1   MQQRRRIFGLRFLRPLYLSNLKFTFVTLPHEINLLEFRIHELAKLYMLVNTEGVCVSEIS 60

Query: 61  KVVTFPDSSWIDTKNCIAFAIFVDGKLRFTKLTDEKWTMIEKHNFACGDVIAYGGKFYAV 120
           KVVTFPDSSWIDTKNCIAFAIFVDGKLRFTKLTDEKWTMIEKHNFACGDVIAYGGKFYAV
Sbjct: 61  KVVTFPDSSWIDTKNCIAFAIFVDGKLRFTKLTDEKWTMIEKHNFACGDVIAYGGKFYAV 120

Query: 121 DRRGKVFSVDSSSMELSQISLPMSGFGKQKHLVECGGEVYMVDRLYDFS 170
           DRRGKVFSVDSSSMELSQISLPMSGFGKQKHLVECGGEVYMVDRLYDFS
Sbjct: 121 DRRGKVFSVDSSSMELSQISLPMSGFGKQKHLVECGGEVYMVDRLYDFS 169

[Close]
BLAST of MELO3C007952.2 vs. NCBI nr
Match: KGN48968.1 (hypothetical protein Csa_6G507410 [Cucumis sativus])

HSP 1 Score: 273.5 bits (698), Expect = 6.0e-70
Identity = 135/149 (90.60%), Postives = 136/149 (91.28%), Query Frame = 0 

Query: 10  LRFLRPLYLSNLKFTFVTLPHEINLLEFRIHELAKLYMLVNTEGVCVSEISKVVTFPDSS 69
           LRFLRPLYLSN KFTF  LPHEIN LEFRI ELAKLYMLVNTEGVCVSEI KVV FPDS 
Sbjct: 36  LRFLRPLYLSNFKFTFEALPHEINSLEFRIRELAKLYMLVNTEGVCVSEIRKVVMFPDSP 95

Query: 70  WIDTKNCIAFAIFVDGKLRFTKLTDEKWTMIEKHNFACGDVIAYGGKFYAVDRRGKVFSV 129
           WIDTKNCI FAIFVDGKL FTKLTDEKWTMIEKHNFA GDVI Y GKFYAVDRRG+VFSV
Sbjct: 96  WIDTKNCIVFAIFVDGKLGFTKLTDEKWTMIEKHNFARGDVIVYRGKFYAVDRRGEVFSV 155

Query: 130 DSSSMELSQISLPMSGFGKQKHLVECGGE 159
           DSSSMELSQISLPMSGFGKQKHLVECGGE
Sbjct: 156 DSSSMELSQISLPMSGFGKQKHLVECGGE 184

[Close]
BLAST of MELO3C007952.2 vs. NCBI nr
Match: XP_004134837.2 (PREDICTED: putative F-box protein At1g65770 [Cucumis sativus] >KGN48969.1 hypothetical protein Csa_6G507420 [Cucumis sativus])

HSP 1 Score: 164.5 bits (415), Expect = 3.9e-37
Identity = 86/158 (54.43%), Postives = 102/158 (64.56%), Query Frame = 0 

Query: 10  LRFLRPLYLSNLKFTFVTLPHEINLLEFRIHELAKLYMLVNTEGVCVSEISKVVTFPDSS 69
           +RFL PL     K     L  E+NLL+F I+E+AK Y L  T G  V  I+KVV FPDS 
Sbjct: 125 MRFLHPLSTRYAKCNSDLLRKEVNLLDFGIYEVAKSYTLGYTNGSLVPRITKVVMFPDSP 184

Query: 70  WIDTKNCIAFAIFVDGKLRFTKLTDEKWTMIEKHNFACGDVIAYGGKFYAVDRRGKVFSV 129
           WID K C   AI+  GKL F K  D KWT+I+  NF   DVI Y G+FYAVDR G +F +
Sbjct: 185 WIDVKKCTILAIYAGGKLGFAKHGDNKWTLIDHCNFHYDDVIVYKGQFYAVDRWGTIFWI 244

Query: 130 DSSSMELSQISLPMSGFGKQKHLVECGGEVYMVDRLYD 168
           D SSM+L Q S P+ GFG QKHLVEC GE+Y+VDR  D
Sbjct: 245 D-SSMKLVQFSPPLCGFGNQKHLVECNGELYVVDRFLD 281

[Close]
BLAST of MELO3C007952.2 vs. NCBI nr
Match: XP_016899202.1 (PREDICTED: putative F-box protein At1g65770 [Cucumis melo])

HSP 1 Score: 163.7 bits (413), Expect = 6.7e-37
Identity = 85/158 (53.80%), Postives = 101/158 (63.92%), Query Frame = 0 

Query: 10  LRFLRPLYLSNLKFTFVTLPHEINLLEFRIHELAKLYMLVNTEGVCVSEISKVVTFPDSS 69
           +RFL PL     K        E+NLL+F I+E+AK Y L  T G  V  I+KVV FPDS 
Sbjct: 122 MRFLHPLSTRYAKCNSDLFRKEVNLLDFGIYEVAKSYTLGYTNGSPVPRITKVVMFPDSP 181

Query: 70  WIDTKNCIAFAIFVDGKLRFTKLTDEKWTMIEKHNFACGDVIAYGGKFYAVDRRGKVFSV 129
           WID K C   A++  GKL F K  D+KWT+I+  NF   DVI Y G+FYAVDR G VF +
Sbjct: 182 WIDVKKCTILAVYAGGKLGFAKHGDDKWTLIDHRNFHYDDVIVYKGQFYAVDRWGTVFWI 241

Query: 130 DSSSMELSQISLPMSGFGKQKHLVECGGEVYMVDRLYD 168
           D SSM L Q S P+ GFG QKHLVEC GE+Y+VDR  D
Sbjct: 242 D-SSMRLVQFSPPLCGFGNQKHLVECNGELYVVDRFLD 278

[Close]
BLAST of MELO3C007952.2 vs. NCBI nr
Match: XP_022926986.1 (putative F-box protein At1g65770 isoform X1 [Cucurbita moschata])

HSP 1 Score: 158.7 bits (400), Expect = 2.1e-35
Identity = 82/158 (51.90%), Postives = 100/158 (63.29%), Query Frame = 0 

Query: 10  LRFLRPLYLSNLKFTFVTLPHEINLLEFRIHELAKLYMLVNTEGVCVSEISKVVTFPDSS 69
           +RFL PL    +K+       E+NLL+FRI+E+AK Y L  T G  V  I+KVV FPD  
Sbjct: 114 MRFLHPLSTRYVKYDNEVFRKEVNLLDFRIYEVAKSYTLGYTNGALVPRITKVVMFPDCP 173

Query: 70  WIDTKNCIAFAIFVDGKLRFTKLTDEKWTMIEKHNFACGDVIAYGGKFYAVDRRGKVFSV 129
           WID K C   A++  GKL F K  D KWT+I+  NF   DVI Y G+FYAVDR G +F +
Sbjct: 174 WIDVKYCTIVAVYAGGKLGFAKHGDYKWTLIDDRNFHYDDVIVYKGQFYAVDRWGTIFWI 233

Query: 130 DSSSMELSQISLPMSGFGKQKHLVECGGEVYMVDRLYD 168
           D SSM L Q S P+ GFG QKHLVE   E+Y+VDR  D
Sbjct: 234 D-SSMRLVQFSPPLCGFGNQKHLVESDDELYVVDRFLD 270

[Close]
BLAST of MELO3C007952.2 vs. TAIR10
Match: AT2G17036.1 (F-box family protein with a domain of unknown function (DUF295))

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-12
Identity = 47/162 (29.01%), Postives = 80/162 (49.38%), Query Frame = 0 

Query: 10  LRFLRPLYLSNLKFTFVTLPHEINLLEFRIHELAKLYMLVNTEGVCVS-------EISKV 69
           +  L+PL  S   F    LP   ++ +F + EL +   L + +  CV        E+ K 
Sbjct: 103 MTLLKPLSSSRNYFP-QHLPRIFDMSKFTVRELCREVKLYHPDYYCVPGHTALELELGKT 162

Query: 70  VTFPDSSWIDTKNCIAFAIFVDGKLRFTKLTDEKWTMIEKH-NFACGDVIAYGGKFYAVD 129
           V      +++    +   I   GKL   +  D +WT+I  +    C D+I + G+F+A+D
Sbjct: 163 VV----KYLNDDKFVLLTILEYGKLAVFRSWDREWTVINDYIPSRCQDLIMFDGRFFAID 222

Query: 130 RRGKVFSVDSSSMELSQISLPMSGFGKQKHLVECGGEVYMVD 164
             G+   VD SS +L+  + P+ G G +K L+E  GE+++VD
Sbjct: 223 YNGRTVVVDYSSFKLTLAANPLIGGGDKKFLIESCGEMFLVD 259

[Close]
BLAST of MELO3C007952.2 vs. TAIR10
Match: AT2G17030.1 (F-box family protein with a domain of unknown function (DUF295))

HSP 1 Score: 69.3 bits (168), Expect = 3.1e-12
Identity = 44/140 (31.43%), Postives = 72/140 (51.43%), Query Frame = 0 

Query: 29  PHEINLLEFRIHELAKLYML--VNTEGVCVSEI---SKVVTFPDSSWIDTKNCIAFAIFV 88
           P  +++ +F++ EL + + L   NT G  V  +     VV + D         +   I V
Sbjct: 124 PRVLDMSKFKVRELGREFKLHYFNTVGDIVESLYLEKAVVKYLDCD--GDYKFVLLTIHV 183

Query: 89  DGKLRFTKLTDEKWTMIEKHNFACGDVIAYGGKFYAVDRRGKVFSVDSSSMELSQISLPM 148
            GKL   +  D  WT+I        DV+ + G+F+AVD  G+   VD SS++L+ ++ P+
Sbjct: 184 SGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFAVDNNGRTVVVDYSSLKLTLVASPV 243

Query: 149 SGFGKQKHLVECGGEVYMVD 164
            G G +K L+E  GE+ +VD
Sbjct: 244 FG-GDKKFLIESCGEMLLVD 260

[Close]
BLAST of MELO3C007952.2 vs. TAIR10
Match: AT2G16365.1 (F-box family protein)

HSP 1 Score: 49.3 bits (116), Expect = 3.3e-06
Identity = 34/102 (33.33%), Postives = 59/102 (57.84%), Query Frame = 0 

Query: 71  IDTKNCIAFAIFVDGK---LRFTKLTDEKWTMIEKH--NFACGDVIAYGGKFYAVDR--R 130
           +D+++   FA+   G+   L   +  +  WT + +H   +A  D++A+ GKFYAVD   R
Sbjct: 642 LDSEDSRDFAVLFAGRMCNLVMYRSRNMSWTQVVEHPEKYAYQDLVAFKGKFYAVDSSGR 701

Query: 131 GKVFSVDSSSMELSQI-SLPMSGFGKQKHLVECGGEVYMVDR 165
           G+VF V+  S E+++I S+  S    ++ LV+ G E+ +V R
Sbjct: 702 GRVFVVE-LSFEVTEIPSVGGSQQSSKESLVQSGEELLLVQR 742

[Close]
BLAST of MELO3C007952.2 vs. TAIR10
Match: AT5G55150.1 (Protein of unknown function (DUF295))

HSP 1 Score: 41.6 bits (96), Expect = 6.9e-04
Identity = 21/75 (28.00%), Postives = 40/75 (53.33%), Query Frame = 0 

Query: 59  ISKVVTFPDSSWIDTKNCIAFAIFVDGKLRFTKLTDEKWTMIEKHNFACGDVIAYGGKFY 118
           I K V+   +S +D +  +      D KL F +  D++WT +E    +  D++   G F+
Sbjct: 140 IKKAVS--STSLLDDEWVVLVIYNTDRKLAFCRRGDKQWTDLESVASSVDDIVFCNGVFF 199

Query: 119 AVDRRGKVFSVDSSS 134
           A+DR G+++  + S+
Sbjct: 200 AIDRLGEIYHCELSA 212

[Close]
BLAST of MELO3C007952.2 vs. TAIR10
Match: AT5G24040.1 (Protein of unknown function (DUF295))

HSP 1 Score: 41.2 bits (95), Expect = 9.0e-04
Identity = 40/148 (27.03%), Postives = 72/148 (48.65%), Query Frame = 0 

Query: 32  INLLEFRIHELAKLYMLVNTEGV----CVSEISKVVTFPDSSWIDTKNCIAFAIFVDGKL 91
           I+LL  +I ELA+ ++   +E      C+S+  + + F   +    +  I   +  +G L
Sbjct: 120 IDLLNCQIFELAQEHVACYSEWFELFECISKCEERIGFMGLNREKNEYMILGKLSFNG-L 179

Query: 92  RFTKLTDEKWTMIE--KHNFACGDVIAYGGKFYAVDRRGKVFSVDSS-SMELSQISLPMS 151
              +  D +WT +E    +F  G ++ + GKFYA+DR GK   VD +  +   Q S P  
Sbjct: 180 AMYRSVDNRWTELEITPDSFFEG-IVPFKGKFYAIDRTGKTTVVDPTLEVNTFQRSRPCD 239

Query: 152 GFGKQKHLVECGGEVYMVDRL----YDF 169
              +++ L+  G ++ +V+      YDF
Sbjct: 240 K-TRKRWLLMTGDKLILVEMCTKSRYDF 264

[Close]
BLAST of MELO3C007952.2 vs. Swiss-Prot
Match: sp|Q6DR20|FB110_ARATH (F-box protein At2g17036 OS=Arabidopsis thaliana OX=3702 GN=At2g17036 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.9e-11
Identity = 47/162 (29.01%), Postives = 80/162 (49.38%), Query Frame = 0 

Query: 10  LRFLRPLYLSNLKFTFVTLPHEINLLEFRIHELAKLYMLVNTEGVCVS-------EISKV 69
           +  L+PL  S   F    LP   ++ +F + EL +   L + +  CV        E+ K 
Sbjct: 104 MTLLKPLSSSRNYFP-QHLPRIFDMSKFTVRELCREVKLYHPDYYCVPGHTALELELGKT 163

Query: 70  VTFPDSSWIDTKNCIAFAIFVDGKLRFTKLTDEKWTMIEKH-NFACGDVIAYGGKFYAVD 129
           V      +++    +   I   GKL   +  D +WT+I  +    C D+I + G+F+A+D
Sbjct: 164 VV----KYLNDDKFVLLTILEYGKLAVFRSWDREWTVINDYIPSRCQDLIMFDGRFFAID 223

Query: 130 RRGKVFSVDSSSMELSQISLPMSGFGKQKHLVECGGEVYMVD 164
             G+   VD SS +L+  + P+ G G +K L+E  GE+++VD
Sbjct: 224 YNGRTVVVDYSSFKLTLAANPLIGGGDKKFLIESCGEMFLVD 260

[Close]
BLAST of MELO3C007952.2 vs. Swiss-Prot
Match: sp|Q3EBZ2|SKI23_ARATH (F-box protein SKIP23 OS=Arabidopsis thaliana OX=3702 GN=SKIP23 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.6e-11
Identity = 44/140 (31.43%), Postives = 72/140 (51.43%), Query Frame = 0 

Query: 29  PHEINLLEFRIHELAKLYML--VNTEGVCVSEI---SKVVTFPDSSWIDTKNCIAFAIFV 88
           P  +++ +F++ EL + + L   NT G  V  +     VV + D         +   I V
Sbjct: 124 PRVLDMSKFKVRELGREFKLHYFNTVGDIVESLYLEKAVVKYLDCD--GDYKFVLLTIHV 183

Query: 89  DGKLRFTKLTDEKWTMIEKHNFACGDVIAYGGKFYAVDRRGKVFSVDSSSMELSQISLPM 148
            GKL   +  D  WT+I        DV+ + G+F+AVD  G+   VD SS++L+ ++ P+
Sbjct: 184 SGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFAVDNNGRTVVVDYSSLKLTLVASPV 243

Query: 149 SGFGKQKHLVECGGEVYMVD 164
            G G +K L+E  GE+ +VD
Sbjct: 244 FG-GDKKFLIESCGEMLLVD 260

[Close]
BLAST of MELO3C007952.2 vs. Swiss-Prot
Match: sp|Q84V03|FB348_ARATH (F-box protein At2g16365 OS=Arabidopsis thaliana OX=3702 GN=At2g16365 PE=2 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 6.0e-05
Identity = 34/102 (33.33%), Postives = 59/102 (57.84%), Query Frame = 0 

Query: 71  IDTKNCIAFAIFVDGK---LRFTKLTDEKWTMIEKH--NFACGDVIAYGGKFYAVDR--R 130
           +D+++   FA+   G+   L   +  +  WT + +H   +A  D++A+ GKFYAVD   R
Sbjct: 642 LDSEDSRDFAVLFAGRMCNLVMYRSRNMSWTQVVEHPEKYAYQDLVAFKGKFYAVDSSGR 701

Query: 131 GKVFSVDSSSMELSQI-SLPMSGFGKQKHLVECGGEVYMVDR 165
           G+VF V+  S E+++I S+  S    ++ LV+ G E+ +V R
Sbjct: 702 GRVFVVE-LSFEVTEIPSVGGSQQSSKESLVQSGEELLLVQR 742

[Close]
BLAST of MELO3C007952.2 vs. TrEMBL
Match: tr|A0A1S4DTH9|A0A1S4DTH9_CUCME (F-box protein SKIP23-like OS=Cucumis melo OX=3656 GN=LOC107990462 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 8.2e-92
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 

Query: 1   MQQRRRIFGLRFLRPLYLSNLKFTFVTLPHEINLLEFRIHELAKLYMLVNTEGVCVSEIS 60
           MQQRRRIFGLRFLRPLYLSNLKFTFVTLPHEINLLEFRIHELAKLYMLVNTEGVCVSEIS
Sbjct: 1   MQQRRRIFGLRFLRPLYLSNLKFTFVTLPHEINLLEFRIHELAKLYMLVNTEGVCVSEIS 60

Query: 61  KVVTFPDSSWIDTKNCIAFAIFVDGKLRFTKLTDEKWTMIEKHNFACGDVIAYGGKFYAV 120
           KVVTFPDSSWIDTKNCIAFAIFVDGKLRFTKLTDEKWTMIEKHNFACGDVIAYGGKFYAV
Sbjct: 61  KVVTFPDSSWIDTKNCIAFAIFVDGKLRFTKLTDEKWTMIEKHNFACGDVIAYGGKFYAV 120

Query: 121 DRRGKVFSVDSSSMELSQISLPMSGFGKQKHLVECGGEVYMVDRLYDFS 170
           DRRGKVFSVDSSSMELSQISLPMSGFGKQKHLVECGGEVYMVDRLYDFS
Sbjct: 121 DRRGKVFSVDSSSMELSQISLPMSGFGKQKHLVECGGEVYMVDRLYDFS 169

[Close]
BLAST of MELO3C007952.2 vs. TrEMBL
Match: tr|A0A0A0KHE7|A0A0A0KHE7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507410 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 3.9e-70
Identity = 135/149 (90.60%), Postives = 136/149 (91.28%), Query Frame = 0 

Query: 10  LRFLRPLYLSNLKFTFVTLPHEINLLEFRIHELAKLYMLVNTEGVCVSEISKVVTFPDSS 69
           LRFLRPLYLSN KFTF  LPHEIN LEFRI ELAKLYMLVNTEGVCVSEI KVV FPDS 
Sbjct: 36  LRFLRPLYLSNFKFTFEALPHEINSLEFRIRELAKLYMLVNTEGVCVSEIRKVVMFPDSP 95

Query: 70  WIDTKNCIAFAIFVDGKLRFTKLTDEKWTMIEKHNFACGDVIAYGGKFYAVDRRGKVFSV 129
           WIDTKNCI FAIFVDGKL FTKLTDEKWTMIEKHNFA GDVI Y GKFYAVDRRG+VFSV
Sbjct: 96  WIDTKNCIVFAIFVDGKLGFTKLTDEKWTMIEKHNFARGDVIVYRGKFYAVDRRGEVFSV 155

Query: 130 DSSSMELSQISLPMSGFGKQKHLVECGGE 159
           DSSSMELSQISLPMSGFGKQKHLVECGGE
Sbjct: 156 DSSSMELSQISLPMSGFGKQKHLVECGGE 184

[Close]
BLAST of MELO3C007952.2 vs. TrEMBL
Match: tr|A0A0A0KJJ1|A0A0A0KJJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507420 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.6e-37
Identity = 86/158 (54.43%), Postives = 102/158 (64.56%), Query Frame = 0 

Query: 10  LRFLRPLYLSNLKFTFVTLPHEINLLEFRIHELAKLYMLVNTEGVCVSEISKVVTFPDSS 69
           +RFL PL     K     L  E+NLL+F I+E+AK Y L  T G  V  I+KVV FPDS 
Sbjct: 125 MRFLHPLSTRYAKCNSDLLRKEVNLLDFGIYEVAKSYTLGYTNGSLVPRITKVVMFPDSP 184

Query: 70  WIDTKNCIAFAIFVDGKLRFTKLTDEKWTMIEKHNFACGDVIAYGGKFYAVDRRGKVFSV 129
           WID K C   AI+  GKL F K  D KWT+I+  NF   DVI Y G+FYAVDR G +F +
Sbjct: 185 WIDVKKCTILAIYAGGKLGFAKHGDNKWTLIDHCNFHYDDVIVYKGQFYAVDRWGTIFWI 244

Query: 130 DSSSMELSQISLPMSGFGKQKHLVECGGEVYMVDRLYD 168
           D SSM+L Q S P+ GFG QKHLVEC GE+Y+VDR  D
Sbjct: 245 D-SSMKLVQFSPPLCGFGNQKHLVECNGELYVVDRFLD 281

[Close]
BLAST of MELO3C007952.2 vs. TrEMBL
Match: tr|A0A1S4DT77|A0A1S4DT77_CUCME (putative F-box protein At1g65770 OS=Cucumis melo OX=3656 GN=LOC103485361 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 4.4e-37
Identity = 85/158 (53.80%), Postives = 101/158 (63.92%), Query Frame = 0 

Query: 10  LRFLRPLYLSNLKFTFVTLPHEINLLEFRIHELAKLYMLVNTEGVCVSEISKVVTFPDSS 69
           +RFL PL     K        E+NLL+F I+E+AK Y L  T G  V  I+KVV FPDS 
Sbjct: 122 MRFLHPLSTRYAKCNSDLFRKEVNLLDFGIYEVAKSYTLGYTNGSPVPRITKVVMFPDSP 181

Query: 70  WIDTKNCIAFAIFVDGKLRFTKLTDEKWTMIEKHNFACGDVIAYGGKFYAVDRRGKVFSV 129
           WID K C   A++  GKL F K  D+KWT+I+  NF   DVI Y G+FYAVDR G VF +
Sbjct: 182 WIDVKKCTILAVYAGGKLGFAKHGDDKWTLIDHRNFHYDDVIVYKGQFYAVDRWGTVFWI 241

Query: 130 DSSSMELSQISLPMSGFGKQKHLVECGGEVYMVDRLYD 168
           D SSM L Q S P+ GFG QKHLVEC GE+Y+VDR  D
Sbjct: 242 D-SSMRLVQFSPPLCGFGNQKHLVECNGELYVVDRFLD 278

[Close]
BLAST of MELO3C007952.2 vs. TrEMBL
Match: tr|A0A0A0KGT9|A0A0A0KGT9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507430 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.2e-31
Identity = 79/159 (49.69%), Postives = 104/159 (65.41%), Query Frame = 0 

Query: 10  LRFLRPLYLSNLKFTFVTLPHEINLLEFRIHELAKLYMLVNTEGVCVSEISKVVTFPDSS 69
           LRFL PL    +K        E+NLL+FRIHE+AK Y+L +T G  +  I+KVV FPDS+
Sbjct: 115 LRFLTPLSTDWVKSRNQVFRKEVNLLDFRIHEVAKSYILRSTIG-GILFINKVVVFPDSA 174

Query: 70  WIDT-KNCIAFAIFVDGKLRFTKLTDEKWTMIEKHNFACGDVIAYGGKFYAVDRRGKVFS 129
           WID  K  I  A+ ++GKL +TK+ D KWT+I   NF   D+I Y G+ Y VDR G VF 
Sbjct: 175 WIDVKKTSIIVAVNIEGKLGYTKVGDYKWTLIGSPNFCFADLIVYEGEIYTVDRLGTVFL 234

Query: 130 VDSSSMELSQISLPMSGFGKQKHLVECGGEVYMVDRLYD 168
           +D SSM+L QIS  +     +KHL+ECGGE+Y+VDR  +
Sbjct: 235 ID-SSMKLVQISPELGVISNEKHLIECGGEIYVVDRFLE 271

The following BLAST results are available for this feature:
BLAST of MELO3C007952.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016899307.11.2e-91100.00PREDICTED: F-box protein SKIP23-like [Cucumis melo][more]
KGN48968.16.0e-7090.60hypothetical protein Csa_6G507410 [Cucumis sativus][more]
XP_004134837.23.9e-3754.43PREDICTED: putative F-box protein At1g65770 [Cucumis sativus] >KGN48969.1 hypoth... [more]
XP_016899202.16.7e-3753.80PREDICTED: putative F-box protein At1g65770 [Cucumis melo][more]
XP_022926986.12.1e-3551.90putative F-box protein At1g65770 isoform X1 [Cucurbita moschata][more]
BLAST of MELO3C007952.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G17036.11.1e-1229.01F-box family protein with a domain of unknown function (DUF295)[more]
AT2G17030.13.1e-1231.43F-box family protein with a domain of unknown function (DUF295)[more]
AT2G16365.13.3e-0633.33F-box family protein[more]
AT5G55150.16.9e-0428.00Protein of unknown function (DUF295)[more]
AT5G24040.19.0e-0427.03Protein of unknown function (DUF295)[more]
BLAST of MELO3C007952.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q6DR20|FB110_ARATH1.9e-1129.01F-box protein At2g17036 OS=Arabidopsis thaliana OX=3702 GN=At2g17036 PE=2 SV=1[more]
sp|Q3EBZ2|SKI23_ARATH5.6e-1131.43F-box protein SKIP23 OS=Arabidopsis thaliana OX=3702 GN=SKIP23 PE=1 SV=1[more]
sp|Q84V03|FB348_ARATH6.0e-0533.33F-box protein At2g16365 OS=Arabidopsis thaliana OX=3702 GN=At2g16365 PE=2 SV=2[more]
BLAST of MELO3C007952.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4DTH9|A0A1S4DTH9_CUCME8.2e-92100.00F-box protein SKIP23-like OS=Cucumis melo OX=3656 GN=LOC107990462 PE=4 SV=1[more]
tr|A0A0A0KHE7|A0A0A0KHE7_CUCSA3.9e-7090.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507410 PE=4 SV=1[more]
tr|A0A0A0KJJ1|A0A0A0KJJ1_CUCSA2.6e-3754.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507420 PE=4 SV=1[more]
tr|A0A1S4DT77|A0A1S4DT77_CUCME4.4e-3753.80putative F-box protein At1g65770 OS=Cucumis melo OX=3656 GN=LOC103485361 PE=4 SV... [more]
tr|A0A0A0KGT9|A0A0A0KGT9_CUCSA1.2e-3149.69Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507430 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006284 base-excision repair
biological_process GO:0032508 DNA duplex unwinding
biological_process GO:0006260 DNA replication
biological_process GO:0000724 double-strand break repair via homologous recombination
biological_process GO:0016567 protein ubiquitination
biological_process GO:0008150 biological_process
cellular_component GO:0005694 chromosome
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0043140 ATP-dependent 3'-5' DNA helicase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0009378 four-way junction helicase activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C007952.2.1MELO3C007952.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 189..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..206
NoneNo IPR availablePANTHERPTHR13710:SF86SUBFAMILY NOT NAMEDcoord: 10..169
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 10..169

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C007952.2Csa6G507410Cucumber (Chinese Long) v2cumedB483
MELO3C007952.2CSPI06G32260Wild cucumber (PI 183967)cpimedB493
MELO3C007952.2Cucsa.044040Cucumber (Gy14) v1cgymedB024
MELO3C007952.2CmaCh07G003980Cucurbita maxima (Rimu)cmamedB907
MELO3C007952.2CmoCh07G003920Cucurbita moschata (Rifu)cmomedB896
MELO3C007952.2Cp4.1LG19g08480Cucurbita pepo (Zucchini)cpemedB531
MELO3C007952.2Cp4.1LG10g10380Cucurbita pepo (Zucchini)cpemedB080
MELO3C007952.2CsGy6G031810Cucumber (Gy14) v2cgybmedB440
MELO3C007952.2Carg07928Silver-seed gourdcarmedB0653
MELO3C007952.2CsaV3_6G047610Cucumber (Chinese Long) v3cucmedB505
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C007952.2Cucumber (Gy14) v2cgybmedB227
MELO3C007952.2Cucumber (Gy14) v1cgymedB534
MELO3C007952.2Cucurbita maxima (Rimu)cmamedB362
MELO3C007952.2Cucurbita maxima (Rimu)cmamedB703
MELO3C007952.2Cucurbita moschata (Rifu)cmomedB348
MELO3C007952.2Cucurbita moschata (Rifu)cmomedB590
MELO3C007952.2Cucurbita moschata (Rifu)cmomedB694
MELO3C007952.2Cucurbita pepo (Zucchini)cpemedB249
MELO3C007952.2Cucurbita pepo (Zucchini)cpemedB325
MELO3C007952.2Wild cucumber (PI 183967)cpimedB254
MELO3C007952.2Cucumber (Chinese Long) v2cumedB252
MELO3C007952.2Melon (DHL92) v3.6.1medmedB150
MELO3C007952.2Bottle gourd (USVL1VR-Ls)lsimedB163
MELO3C007952.2Bottle gourd (USVL1VR-Ls)lsimedB477
MELO3C007952.2Watermelon (Charleston Gray)medwcgB504
MELO3C007952.2Watermelon (Charleston Gray)medwcgB509
MELO3C007952.2Watermelon (97103) v1medwmB541
MELO3C007952.2Watermelon (97103) v1medwmB559
MELO3C007952.2Silver-seed gourdcarmedB0362
MELO3C007952.2Silver-seed gourdcarmedB0418
MELO3C007952.2Cucumber (Chinese Long) v3cucmedB258
MELO3C007952.2Watermelon (97103) v2medwmbB505
MELO3C007952.2Watermelon (97103) v2medwmbB512
MELO3C007952.2Wax gourdmedwgoB625
MELO3C007952.2Wax gourdmedwgoB658