Csa4G268100 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAGTTCAGTTGAAAAACAAGAGCATAGAGATGTTGCATTTAAATTAGTTGGGAAATGCATCAAGAAGAGATCTGGTAAACGCAGCTTTGTTGGTGTCAGGCAAAGACCTTCTGGGAAATGGGTAGCAGAGATCAAAGACGCAACTCATGATATCAGAATGTGGTTGGGAACCTTCAACACACCGGAGGAAGCTGCCAGAGCTTACGACGAAGCTGCCTGCCTCCTACGTGGCTCGAATGCTAGAACCAACTTCACTCTCGCTTCCAACTCCTCCTCTGCCCTCTCTTTCAAAATCAGAAACCTTCTCATTCATAAGATCACTTTGAAACGAAGTTCAATCACTGAAACTCATGCTCATGTTGCTCATTCTGAAACAAACCAAGAAATGCACATGTTTGACAATAATGCAGTCTGGAGCAGCTGCAATGGAGAAATTGAGGTGGGTTTTTGTCACTTCACCCATTCATGCTGCGATCTTCCTCTTGGGTTCAATTTTGATATGGATGAGTCTTTGTCTGCACTGAATGGAATCACTCAACATTTAGGAAATGCATATGATGATGCCTTTGACACACCTGCTGCTCACATTGATTATACCGATTTCTCTTCATTTTTCTTTGTACCAACCTGA ATGGAGAGTTCAGTTGAAAAACAAGAGCATAGAGATGTTGCATTTAAATTAGTTGGGAAATGCATCAAGAAGAGATCTGGTAAACGCAGCTTTGTTGGTGTCAGGCAAAGACCTTCTGGGAAATGGGTAGCAGAGATCAAAGACGCAACTCATGATATCAGAATGTGGTTGGGAACCTTCAACACACCGGAGGAAGCTGCCAGAGCTTACGACGAAGCTGCCTGCCTCCTACGTGGCTCGAATGCTAGAACCAACTTCACTCTCGCTTCCAACTCCTCCTCTGCCCTCTCTTTCAAAATCAGAAACCTTCTCATTCATAAGATCACTTTGAAACGAAGTTCAATCACTGAAACTCATGCTCATGTTGCTCATTCTGAAACAAACCAAGAAATGCACATGTTTGACAATAATGCAGTCTGGAGCAGCTGCAATGGAGAAATTGAGGTGGGTTTTTGTCACTTCACCCATTCATGCTGCGATCTTCCTCTTGGGTTCAATTTTGATATGGATGAGTCTTTGTCTGCACTGAATGGAATCACTCAACATTTAGGAAATGCATATGATGATGCCTTTGACACACCTGCTGCTCACATTGATTATACCGATTTCTCTTCATTTTTCTTTGTACCAACCTGA ATGGAGAGTTCAGTTGAAAAACAAGAGCATAGAGATGTTGCATTTAAATTAGTTGGGAAATGCATCAAGAAGAGATCTGGTAAACGCAGCTTTGTTGGTGTCAGGCAAAGACCTTCTGGGAAATGGGTAGCAGAGATCAAAGACGCAACTCATGATATCAGAATGTGGTTGGGAACCTTCAACACACCGGAGGAAGCTGCCAGAGCTTACGACGAAGCTGCCTGCCTCCTACGTGGCTCGAATGCTAGAACCAACTTCACTCTCGCTTCCAACTCCTCCTCTGCCCTCTCTTTCAAAATCAGAAACCTTCTCATTCATAAGATCACTTTGAAACGAAGTTCAATCACTGAAACTCATGCTCATGTTGCTCATTCTGAAACAAACCAAGAAATGCACATGTTTGACAATAATGCAGTCTGGAGCAGCTGCAATGGAGAAATTGAGGTGGGTTTTTGTCACTTCACCCATTCATGCTGCGATCTTCCTCTTGGGTTCAATTTTGATATGGATGAGTCTTTGTCTGCACTGAATGGAATCACTCAACATTTAGGAAATGCATATGATGATGCCTTTGACACACCTGCTGCTCACATTGATTATACCGATTTCTCTTCATTTTTCTTTGTACCAACCTGA MESSVEKQEHRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSSITETHAHVAHSETNQEMHMFDNNAVWSSCNGEIEVGFCHFTHSCCDLPLGFNFDMDESLSALNGITQHLGNAYDDAFDTPAAHIDYTDFSSFFFVPT*
BLAST of Csa4G268100 vs. Swiss-Prot
Match: RA211_ARATH (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2-11 PE=2 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 6.7e-28 Identity = 63/90 (70.00%), Postives = 67/90 (74.44%), Query Frame = 1
BLAST of Csa4G268100 vs. Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 6.5e-15 Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 1
BLAST of Csa4G268100 vs. Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.4e-14 Identity = 38/70 (54.29%), Postives = 45/70 (64.29%), Query Frame = 1
BLAST of Csa4G268100 vs. Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=1 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.9e-14 Identity = 46/97 (47.42%), Postives = 56/97 (57.73%), Query Frame = 1
BLAST of Csa4G268100 vs. Swiss-Prot
Match: WIN1_ARATH (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.2e-14 Identity = 40/69 (57.97%), Postives = 46/69 (66.67%), Query Frame = 1
BLAST of Csa4G268100 vs. TrEMBL
Match: A0A0A0L1N6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G268100 PE=4 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 1.2e-119 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 1
BLAST of Csa4G268100 vs. TrEMBL
Match: A0A067EKK6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023169mg PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.1e-28 Identity = 77/147 (52.38%), Postives = 94/147 (63.95%), Query Frame = 1
BLAST of Csa4G268100 vs. TrEMBL
Match: D7SLK5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g00490 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.4e-27 Identity = 83/164 (50.61%), Postives = 99/164 (60.37%), Query Frame = 1
BLAST of Csa4G268100 vs. TrEMBL
Match: B9GY71_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s21090g PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.8e-27 Identity = 68/101 (67.33%), Postives = 76/101 (75.25%), Query Frame = 1
BLAST of Csa4G268100 vs. TrEMBL
Match: V4TEP9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018044mg PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 3.0e-27 Identity = 76/147 (51.70%), Postives = 93/147 (63.27%), Query Frame = 1
BLAST of Csa4G268100 vs. TAIR10
Match: AT5G19790.1 (AT5G19790.1 related to AP2 11) HSP 1 Score: 125.6 bits (314), Expect = 3.8e-29 Identity = 63/90 (70.00%), Postives = 67/90 (74.44%), Query Frame = 1
BLAST of Csa4G268100 vs. TAIR10
Match: AT4G23750.1 (AT4G23750.1 cytokinin response factor 2) HSP 1 Score: 82.4 bits (202), Expect = 3.6e-16 Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 1
BLAST of Csa4G268100 vs. TAIR10
Match: AT4G34410.1 (AT4G34410.1 redox responsive transcription factor 1) HSP 1 Score: 80.9 bits (198), Expect = 1.1e-15 Identity = 46/97 (47.42%), Postives = 56/97 (57.73%), Query Frame = 1
BLAST of Csa4G268100 vs. TAIR10
Match: AT3G14230.1 (AT3G14230.1 related to AP2 2) HSP 1 Score: 80.1 bits (196), Expect = 1.8e-15 Identity = 39/70 (55.71%), Postives = 44/70 (62.86%), Query Frame = 1
BLAST of Csa4G268100 vs. TAIR10
Match: AT1G15360.1 (AT1G15360.1 Integrase-type DNA-binding superfamily protein) HSP 1 Score: 80.1 bits (196), Expect = 1.8e-15 Identity = 40/69 (57.97%), Postives = 46/69 (66.67%), Query Frame = 1
BLAST of Csa4G268100 vs. NCBI nr
Match: gi|449463881|ref|XP_004149659.1| (PREDICTED: ethylene-responsive transcription factor ERF087 [Cucumis sativus]) HSP 1 Score: 437.2 bits (1123), Expect = 1.7e-119 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 1
BLAST of Csa4G268100 vs. NCBI nr
Match: gi|659098050|ref|XP_008449953.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11 [Cucumis melo]) HSP 1 Score: 404.8 bits (1039), Expect = 9.1e-110 Identity = 195/211 (92.42%), Postives = 200/211 (94.79%), Query Frame = 1
BLAST of Csa4G268100 vs. NCBI nr
Match: gi|641835470|gb|KDO54445.1| (hypothetical protein CISIN_1g023169mg [Citrus sinensis]) HSP 1 Score: 134.0 bits (336), Expect = 3.0e-28 Identity = 77/147 (52.38%), Postives = 94/147 (63.95%), Query Frame = 1
BLAST of Csa4G268100 vs. NCBI nr
Match: gi|568871662|ref|XP_006489001.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11 [Citrus sinensis]) HSP 1 Score: 134.0 bits (336), Expect = 3.0e-28 Identity = 77/147 (52.38%), Postives = 94/147 (63.95%), Query Frame = 1
BLAST of Csa4G268100 vs. NCBI nr
Match: gi|971562154|ref|XP_015167123.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11 [Solanum tuberosum]) HSP 1 Score: 131.3 bits (329), Expect = 1.9e-27 Identity = 77/145 (53.10%), Postives = 98/145 (67.59%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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