CmaCh20G000110 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTCATGCCGCCATTATAAAACCAATGCCCATCACTTCTTCCTTCATCTCAATTCCATTCGTAAACTTTGCAATGCAGATGGAGGGTTCAGTTGAGAAACAACAGCATAAAGAGGTTTCAGTTTCAGGCAGCAAAATTGGGAAATGCAAGGACAGATCTCGTAGACGCAGCTTCGTTGGTGTCAGACAAAGGCCCTCTGGGAAATGGGTGGCAGAGATCAAAGACACAACCCATGATATCAGAATGTGGTTGGGAACCTTCAAGACAGCGGAAGAGGCTGCCACAGCATACGATGAAGCCGCCCGCCTCCTCCGTGGTGCCAATACTCGTACCAACTTCGCAACCCATCTCAAATCCACCTCCGCCCTCTCTTTCAAAATTAGAAATCTCCTCAACCAAAAGATCAGTTTGAAACGAAGCTCCTCCAAAACCAGCCCCACCAAACTCGGTCCAATCACTGAAATTGAGGGTGCTCATTCTGGGCTCTCCTTCTCCACTGCCACAAACCAAGAGATACATAAGACGTTTGATAATGCAGACTGGAGCAGCGCCTGCAGTGGAGAAGTTGAGGCGCTTGGTCTTCGTCAGTTCAGCCATTCGTGGTGGCATCTTCCTCTTGGGTTGAACTTGGAAATGGATGAGCCTCCTGATCCATTACTGAGCCACCAAGATAGACAAGTGGCAGAGATGTCATGTGATTCAGAGCAATTAGATCTAACATCCATACCTATGTGTGCAGTGAATGGAATGAGTGAATATTTAGGAACTACATATGATGCCTTTGATTCTGTGGGTCAGATATTCTGCCCAAGTTGATTATACCCCGCTTTAATTAATTCCCTTTCTACTGCTATTTGAATGCAGATGATAAGGCAAAAGAAAATCAAACAAGCAGGCAGCACCCAATGCGCTCATACATGTACAACTTTTTCATATTATAAAAACACATGTACAACTTGTGATATTGTCTATCACAATATCAATCCATCCACAACTCAAGAAAAGATAGAATTACAGTCGAAACACTGGCGTACATATTCCTGATTTCATACAAAGAGCCACAAAGATAAGTAATGGAAATTTACTCCAAGACAAAACAGAATCGCTTATGGAAATGAAAACGGCAGGCTTTTGA ATGCCTCATGCCGCCATTATAAAACCAATGCCCATCACTTCTTCCTTCATCTCAATTCCATTCGTAAACTTTGCAATGCAGATGGAGGGTTCAGTTGAGAAACAACAGCATAAAGAGGTTTCAGTTTCAGGCAGCAAAATTGGGAAATGCAAGGACAGATCTCGTAGACGCAGCTTCGTTGGTGTCAGACAAAGGCCCTCTGGGAAATGGGTGGCAGAGATCAAAGACACAACCCATGATATCAGAATGTGGTTGGGAACCTTCAAGACAGCGGAAGAGGCTGCCACAGCATACGATGAAGCCGCCCGCCTCCTCCGTGGTGCCAATACTCGTACCAACTTCGCAACCCATCTCAAATCCACCTCCGCCCTCTCTTTCAAAATTAGAAATCTCCTCAACCAAAAGATCAGTTTGAAACGAAGCTCCTCCAAAACCAGCCCCACCAAACTCGGTCCAATCACTGAAATTGAGGGTGCTCATTCTGGGCTCTCCTTCTCCACTGCCACAAACCAAGAGATACATAAGACGTTTGATAATGCAGACTGGAGCAGCGCCTGCAGTGGAGAAGTTGAGGCGCTTGGTCTTCGTCAGTTCAGCCATTCGTGGTGGCATCTTCCTCTTGGGTTGAACTTGGAAATGGATGAGCCTCCTGATCCATTACTGAGCCACCAAGATAGACAAGTGGCAGAGATGTCATGTGATTCAGAGCAATTAGATCTAACATCCATACCTATGTGTGCAGTGAATGGAATGAGTGAATATTTAGGAACTACATATGATGCCTTTGATTCTGTGGATGATAAGGCAAAAGAAAATCAAACAAGCAGGCAGCACCCAATGCGCTCATACATTCGAAACACTGGCGTACATATTCCTGATTTCATACAAAGAGCCACAAAGATAAGTAATGGAAATTTACTCCAAGACAAAACAGAATCGCTTATGGAAATGAAAACGGCAGGCTTTTGA ATGCCTCATGCCGCCATTATAAAACCAATGCCCATCACTTCTTCCTTCATCTCAATTCCATTCGTAAACTTTGCAATGCAGATGGAGGGTTCAGTTGAGAAACAACAGCATAAAGAGGTTTCAGTTTCAGGCAGCAAAATTGGGAAATGCAAGGACAGATCTCGTAGACGCAGCTTCGTTGGTGTCAGACAAAGGCCCTCTGGGAAATGGGTGGCAGAGATCAAAGACACAACCCATGATATCAGAATGTGGTTGGGAACCTTCAAGACAGCGGAAGAGGCTGCCACAGCATACGATGAAGCCGCCCGCCTCCTCCGTGGTGCCAATACTCGTACCAACTTCGCAACCCATCTCAAATCCACCTCCGCCCTCTCTTTCAAAATTAGAAATCTCCTCAACCAAAAGATCAGTTTGAAACGAAGCTCCTCCAAAACCAGCCCCACCAAACTCGGTCCAATCACTGAAATTGAGGGTGCTCATTCTGGGCTCTCCTTCTCCACTGCCACAAACCAAGAGATACATAAGACGTTTGATAATGCAGACTGGAGCAGCGCCTGCAGTGGAGAAGTTGAGGCGCTTGGTCTTCGTCAGTTCAGCCATTCGTGGTGGCATCTTCCTCTTGGGTTGAACTTGGAAATGGATGAGCCTCCTGATCCATTACTGAGCCACCAAGATAGACAAGTGGCAGAGATGTCATGTGATTCAGAGCAATTAGATCTAACATCCATACCTATGTGTGCAGTGAATGGAATGAGTGAATATTTAGGAACTACATATGATGCCTTTGATTCTGTGGATGATAAGGCAAAAGAAAATCAAACAAGCAGGCAGCACCCAATGCGCTCATACATTCGAAACACTGGCGTACATATTCCTGATTTCATACAAAGAGCCACAAAGATAAGTAATGGAAATTTACTCCAAGACAAAACAGAATCGCTTATGGAAATGAAAACGGCAGGCTTTTGA MPHAAIIKPMPITSSFISIPFVNFAMQMEGSVEKQQHKEVSVSGSKIGKCKDRSRRRSFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAATAYDEAARLLRGANTRTNFATHLKSTSALSFKIRNLLNQKISLKRSSSKTSPTKLGPITEIEGAHSGLSFSTATNQEIHKTFDNADWSSACSGEVEALGLRQFSHSWWHLPLGLNLEMDEPPDPLLSHQDRQVAEMSCDSEQLDLTSIPMCAVNGMSEYLGTTYDAFDSVDDKAKENQTSRQHPMRSYIRNTGVHIPDFIQRATKISNGNLLQDKTESLMEMKTAGF
BLAST of CmaCh20G000110 vs. Swiss-Prot
Match: RA211_ARATH (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2-11 PE=2 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 7.0e-29 Identity = 96/231 (41.56%), Postives = 118/231 (51.08%), Query Frame = 1
BLAST of CmaCh20G000110 vs. Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 7.5e-15 Identity = 47/103 (45.63%), Postives = 63/103 (61.17%), Query Frame = 1
BLAST of CmaCh20G000110 vs. Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=1 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.9e-14 Identity = 62/189 (32.80%), Postives = 95/189 (50.26%), Query Frame = 1
BLAST of CmaCh20G000110 vs. Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.9e-14 Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 1
BLAST of CmaCh20G000110 vs. Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=1 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 3.2e-13 Identity = 55/164 (33.54%), Postives = 81/164 (49.39%), Query Frame = 1
BLAST of CmaCh20G000110 vs. TrEMBL
Match: A0A0A0L1N6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G268100 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 4.0e-47 Identity = 126/239 (52.72%), Postives = 152/239 (63.60%), Query Frame = 1
BLAST of CmaCh20G000110 vs. TrEMBL
Match: A0A0D2VJP1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G244500 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 4.3e-33 Identity = 109/242 (45.04%), Postives = 141/242 (58.26%), Query Frame = 1
BLAST of CmaCh20G000110 vs. TrEMBL
Match: A0A059D8K7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03605 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 5.6e-33 Identity = 105/248 (42.34%), Postives = 139/248 (56.05%), Query Frame = 1
BLAST of CmaCh20G000110 vs. TrEMBL
Match: V7CXD8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G111800g PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.8e-32 Identity = 107/272 (39.34%), Postives = 151/272 (55.51%), Query Frame = 1
BLAST of CmaCh20G000110 vs. TrEMBL
Match: D7SLK5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g00490 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 3.1e-31 Identity = 117/267 (43.82%), Postives = 149/267 (55.81%), Query Frame = 1
BLAST of CmaCh20G000110 vs. TAIR10
Match: AT5G19790.1 (AT5G19790.1 related to AP2 11) HSP 1 Score: 129.4 bits (324), Expect = 3.9e-30 Identity = 96/231 (41.56%), Postives = 118/231 (51.08%), Query Frame = 1
BLAST of CmaCh20G000110 vs. TAIR10
Match: AT2G47520.1 (AT2G47520.1 Integrase-type DNA-binding superfamily protein) HSP 1 Score: 82.8 bits (203), Expect = 4.2e-16 Identity = 47/103 (45.63%), Postives = 63/103 (61.17%), Query Frame = 1
BLAST of CmaCh20G000110 vs. TAIR10
Match: AT1G53910.1 (AT1G53910.1 related to AP2 12) HSP 1 Score: 80.9 bits (198), Expect = 1.6e-15 Identity = 62/189 (32.80%), Postives = 95/189 (50.26%), Query Frame = 1
BLAST of CmaCh20G000110 vs. TAIR10
Match: AT2G33710.2 (AT2G33710.2 Integrase-type DNA-binding superfamily protein) HSP 1 Score: 80.1 bits (196), Expect = 2.7e-15 Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 1
BLAST of CmaCh20G000110 vs. TAIR10
Match: AT3G14230.1 (AT3G14230.1 related to AP2 2) HSP 1 Score: 77.4 bits (189), Expect = 1.8e-14 Identity = 55/164 (33.54%), Postives = 81/164 (49.39%), Query Frame = 1
BLAST of CmaCh20G000110 vs. NCBI nr
Match: gi|449463881|ref|XP_004149659.1| (PREDICTED: ethylene-responsive transcription factor ERF087 [Cucumis sativus]) HSP 1 Score: 196.8 bits (499), Expect = 5.7e-47 Identity = 126/239 (52.72%), Postives = 152/239 (63.60%), Query Frame = 1
BLAST of CmaCh20G000110 vs. NCBI nr
Match: gi|659098050|ref|XP_008449953.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11 [Cucumis melo]) HSP 1 Score: 196.8 bits (499), Expect = 5.7e-47 Identity = 127/239 (53.14%), Postives = 151/239 (63.18%), Query Frame = 1
BLAST of CmaCh20G000110 vs. NCBI nr
Match: gi|823258168|ref|XP_012461789.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Gossypium raimondii]) HSP 1 Score: 151.0 bits (380), Expect = 3.6e-33 Identity = 119/280 (42.50%), Postives = 152/280 (54.29%), Query Frame = 1
BLAST of CmaCh20G000110 vs. NCBI nr
Match: gi|763816522|gb|KJB83374.1| (hypothetical protein B456_013G244500 [Gossypium raimondii]) HSP 1 Score: 150.2 bits (378), Expect = 6.1e-33 Identity = 109/242 (45.04%), Postives = 141/242 (58.26%), Query Frame = 1
BLAST of CmaCh20G000110 vs. NCBI nr
Match: gi|702278702|ref|XP_010044941.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11 [Eucalyptus grandis]) HSP 1 Score: 149.8 bits (377), Expect = 8.0e-33 Identity = 105/248 (42.34%), Postives = 139/248 (56.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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