Csa2G004720 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCATAAATTTCGAATTCTCTTCGTTTTCTTTTTCTCCATTATCAAATTCTCAACGACAATGCCGAGCCGATTCCCCGGAGCCCTATCTCAAGATTGGGAGCCAGTAGTTCTCCACAAGGCGAAGCCAAAAGCTCAGGCCCTTCGTGATCCGAAGGCAGTGAACCAAGCGATCCGATCCGGCGCACCGGTTCAGACAGTGAAGAAATTCGACGCTGGCTTGAACAAGAAAGTCACAGCGGCGCCAGTGAACGCAAGGAAGCTGGAGGAAGGGACCGAACCGGCAGCGCTGGACCGGGTGGCGGTTGAGGTGAGACAGGCGATTCAGAAGGCTCGATTGGAGAAGAAGATGAGCCAAGCAGAACTGGCGAAACAGATTAACGAACGGACTCAGGTTGTGCAAGAATATGAAAATGGGAAGGCGGTGCCGAATCAAGCGGTTTTGGCCAAGATGGAGAAAGTTTTGGGCGTGAAGCTTCGAGGAAGATCGGGGAAATGAGATTTTCGGATTAAAAGCGTTTTCTCAAATTGCGATTTAATGAAGGACTTTGGTGGTTGTTTATAGGATGTGTGAATATTGTGAGAAATGGGATTGAGTGGAAGAAATGAGAGTCGTTGATTTGTAAAGAATGTATGGATCTACGTGGTTTAAGAATTAGTTAAAAATTAATGTTATATACGAAGTACCTTGCGACTTAAAATGTATATTCATTAAAAAAATCTAAAAAATGAAATA ATGCCGAGCCGATTCCCCGGAGCCCTATCTCAAGATTGGGAGCCAGTAGTTCTCCACAAGGCGAAGCCAAAAGCTCAGGCCCTTCGTGATCCGAAGGCAGTGAACCAAGCGATCCGATCCGGCGCACCGGTTCAGACAGTGAAGAAATTCGACGCTGGCTTGAACAAGAAAGTCACAGCGGCGCCAGTGAACGCAAGGAAGCTGGAGGAAGGGACCGAACCGGCAGCGCTGGACCGGGTGGCGGTTGAGGTGAGACAGGCGATTCAGAAGGCTCGATTGGAGAAGAAGATGAGCCAAGCAGAACTGGCGAAACAGATTAACGAACGGACTCAGGTTGTGCAAGAATATGAAAATGGGAAGGCGGTGCCGAATCAAGCGGTTTTGGCCAAGATGGAGAAAGTTTTGGGCGTGAAGCTTCGAGGAAGATCGGGGAAATGA ATGCCGAGCCGATTCCCCGGAGCCCTATCTCAAGATTGGGAGCCAGTAGTTCTCCACAAGGCGAAGCCAAAAGCTCAGGCCCTTCGTGATCCGAAGGCAGTGAACCAAGCGATCCGATCCGGCGCACCGGTTCAGACAGTGAAGAAATTCGACGCTGGCTTGAACAAGAAAGTCACAGCGGCGCCAGTGAACGCAAGGAAGCTGGAGGAAGGGACCGAACCGGCAGCGCTGGACCGGGTGGCGGTTGAGGTGAGACAGGCGATTCAGAAGGCTCGATTGGAGAAGAAGATGAGCCAAGCAGAACTGGCGAAACAGATTAACGAACGGACTCAGGTTGTGCAAGAATATGAAAATGGGAAGGCGGTGCCGAATCAAGCGGTTTTGGCCAAGATGGAGAAAGTTTTGGGCGTGAAGCTTCGAGGAAGATCGGGGAAATGA MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVTAAPVNARKLEEGTEPAALDRVAVEVRQAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGRSGK*
BLAST of Csa2G004720 vs. Swiss-Prot
Match: MBF1C_ARATH (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana GN=MBF1C PE=1 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 2.5e-58 Identity = 119/148 (80.41%), Postives = 128/148 (86.49%), Query Frame = 1
BLAST of Csa2G004720 vs. Swiss-Prot
Match: MBF1B_ARATH (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana GN=MBF1B PE=2 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 1.3e-35 Identity = 73/137 (53.28%), Postives = 102/137 (74.45%), Query Frame = 1
BLAST of Csa2G004720 vs. Swiss-Prot
Match: MBF1A_ARATH (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana GN=MBF1A PE=2 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.2e-33 Identity = 69/137 (50.36%), Postives = 100/137 (72.99%), Query Frame = 1
BLAST of Csa2G004720 vs. Swiss-Prot
Match: EDF1_XENLA (Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis GN=edf1 PE=2 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.3e-22 Identity = 60/132 (45.45%), Postives = 82/132 (62.12%), Query Frame = 1
BLAST of Csa2G004720 vs. Swiss-Prot
Match: EDF1_MOUSE (Endothelial differentiation-related factor 1 OS=Mus musculus GN=Edf1 PE=1 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.1e-21 Identity = 57/132 (43.18%), Postives = 83/132 (62.88%), Query Frame = 1
BLAST of Csa2G004720 vs. TrEMBL
Match: A0A0A0LFV9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G004720 PE=4 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 7.3e-73 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 1
BLAST of Csa2G004720 vs. TrEMBL
Match: F6HH28_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g04080 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 2.4e-60 Identity = 125/146 (85.62%), Postives = 134/146 (91.78%), Query Frame = 1
BLAST of Csa2G004720 vs. TrEMBL
Match: W9QP00_9ROSA (Multiprotein-bridging factor 1c OS=Morus notabilis GN=L484_020825 PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 3.2e-60 Identity = 123/147 (83.67%), Postives = 137/147 (93.20%), Query Frame = 1
BLAST of Csa2G004720 vs. TrEMBL
Match: A0A0D2SNV8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G069500 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 2.1e-59 Identity = 118/145 (81.38%), Postives = 132/145 (91.03%), Query Frame = 1
BLAST of Csa2G004720 vs. TrEMBL
Match: W9QGJ2_9ROSA (Multiprotein-bridging factor 1c OS=Morus notabilis GN=L484_020823 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 2.7e-59 Identity = 122/147 (82.99%), Postives = 135/147 (91.84%), Query Frame = 1
BLAST of Csa2G004720 vs. TAIR10
Match: AT3G24500.1 (AT3G24500.1 multiprotein bridging factor 1C) HSP 1 Score: 226.1 bits (575), Expect = 1.4e-59 Identity = 119/148 (80.41%), Postives = 128/148 (86.49%), Query Frame = 1
BLAST of Csa2G004720 vs. TAIR10
Match: AT3G58680.1 (AT3G58680.1 multiprotein bridging factor 1B) HSP 1 Score: 150.6 bits (379), Expect = 7.5e-37 Identity = 73/137 (53.28%), Postives = 102/137 (74.45%), Query Frame = 1
BLAST of Csa2G004720 vs. TAIR10
Match: AT2G42680.1 (AT2G42680.1 multiprotein bridging factor 1A) HSP 1 Score: 144.1 bits (362), Expect = 7.0e-35 Identity = 69/137 (50.36%), Postives = 100/137 (72.99%), Query Frame = 1
BLAST of Csa2G004720 vs. NCBI nr
Match: gi|449443143|ref|XP_004139340.1| (PREDICTED: multiprotein-bridging factor 1c [Cucumis sativus]) HSP 1 Score: 281.2 bits (718), Expect = 1.0e-72 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 1
BLAST of Csa2G004720 vs. NCBI nr
Match: gi|659071135|ref|XP_008458302.1| (PREDICTED: multiprotein-bridging factor 1c [Cucumis melo]) HSP 1 Score: 273.9 bits (699), Expect = 1.7e-70 Identity = 140/145 (96.55%), Postives = 142/145 (97.93%), Query Frame = 1
BLAST of Csa2G004720 vs. NCBI nr
Match: gi|225445278|ref|XP_002284605.1| (PREDICTED: multiprotein-bridging factor 1c [Vitis vinifera]) HSP 1 Score: 239.6 bits (610), Expect = 3.5e-60 Identity = 125/146 (85.62%), Postives = 134/146 (91.78%), Query Frame = 1
BLAST of Csa2G004720 vs. NCBI nr
Match: gi|703070662|ref|XP_010088841.1| (Multiprotein-bridging factor 1c [Morus notabilis]) HSP 1 Score: 239.2 bits (609), Expect = 4.5e-60 Identity = 123/147 (83.67%), Postives = 137/147 (93.20%), Query Frame = 1
BLAST of Csa2G004720 vs. NCBI nr
Match: gi|719980400|ref|XP_010249785.1| (PREDICTED: multiprotein-bridging factor 1c [Nelumbo nucifera]) HSP 1 Score: 237.3 bits (604), Expect = 1.7e-59 Identity = 125/145 (86.21%), Postives = 132/145 (91.03%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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