Csa1G056980 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAGGAAAAAGAAAAAGAATAGGTTTATTGGTGGGCAGTATAGCACCATTAACACAACTCCCTAAGTTCCCAACCCCAATTTCCCCTCTACTTAACTTTTGCAATAAAACGACAACCTGACGGTCAAGAAAAACAAACCCCTGCTTCGGTGCTTCCCTTCCGCTCACTCATACACCATTATAACAATTTGTTTTCATTTTGTTTAGATGTATAGAAATGGCGAACTTGATGACGATGATGAACATGAACCAGTGTGGGTCTAAACCTGCATGGCTTCAAGCCCTTATGGCCGACACTTTCTTTGGAACTTGCTTGCTTCATGAGAACCGCCGCAAGTCCGAGAAGAACGTTTTTTGCTTGCATTGTTGTCTTAGTATTTGCCCTCACTGTCTTCCTTCTCACCGTTCTCATCCTCTTCTTCAGGTTTCATTTCTTTTTCTTTTCTTTTAATTTATTTATTATTTTATCTAAATATCCCCACCCCCCACCAAAAAAAAAAAAAAAAAAAACTTTATCTTACTTTTGGGATTTGGTTGGTTTCCTATTCGTAGACGACTCCATTTTTATCTATCTTTCCTGCCAAACTCTTCTCACTTGTTGCTTTCACTCAATATTAACATTTTTACTACTTTATCCTATAATTCTCCTTTTTTACTAATTAAATTTAATTAATCAGGTCAGACGATATGTTTATCATGATGTAATTCGATTGGGGGATCTTGAGAAGCTTATTGACTGTTCTCATATTCAGGTATTTTCTTAAAAAAAAGTTTGCTCAATTTTGTTGGTGCTGTTAATTAAGGAGATATGTGTGATTTGAATTTGAATTTCTTTTTATAAAATTTGGCAGCCGTACACTATAAACGGAGCCAAAGTGATATTTTTGAATTACAGGCCACAATCTAGGCCATGCAAAGCAGGCTCTTCAACCAATGCTTGTTTCACTTGTGATAGAATTCTTCAAGAACCCTTCCATTTCTGCTCTCTCTCCTGCAAGGTTTTTTTCTCCCTTTAATTTAACCCCTTTCTTTTTATTTCAAAATTATCATCTATTGTGTTACCATTTTCACTTTTAATTTACCTCTAATTATTGTTTCTTGAAAAATTTTCAATTTATATAATCTATTTGAGTATATTTTTACATTATTCGACTAGTAATGTAATAGCTATTAATGAGTTAGTTAATCAGTAATCTAAAGACAAATACTAGGGTTGTGATGTACCATTGTATAAAATGTAATTTCAGCTTAATAATAATTGTCTTAATTATAAATTTGAGGAATTTTTTTGTGTATCTCATAGTAATTATTAACCAGCAATATATTTTTGCTATCTTTTTTACATCGAATATAGTAAAATTGGAAAATGATATAATATTAAATTTAGTTAATTATTTATTTAGTATGTGTGTTTTAAGAAAAAAAAAATTAAACATTTACTTTTTCAATCCTTTATTTACATTAACAATTTCCGTATTTTTATTTTATTTTATATTTGTTTTGGGTAAATATGCATTTCATTATATACGAGCATAATGTTTACGGCAGAGAAAAGAGAGAAAAAATTCTTTAATGGTATAGAGTTGATTTGAATTGACGGATGATTTAACAACGATCAGGTGGATCACATGGTGTATCAAGGGGAAGATTTATATAGTATTCTACACAGGTTCAACGAATCGGATTTCTCCTACTCTCAATTCGAAGGATTAAGAGTTGATGGACTGGAAGGAATGGAAGAAGATGGTCAAATGACACCAAATTCCGTCGTAGAGGATTCATCACAACACTTCAACAAATCCTCATCTTGTTCCAATATGAACGACTCAGCTCCCACAAATGTGTCATCAGGAACTCACATCTTCAAAAGAAAAAACAAAGGCACCGATTTTCTTCCCGCCGGAATTGTTCTATCTCTCAGCAGCCGAAGAAAAGGCGCCCCTCAAAGGGCTCCTCTCTCTTAACCCCCCCACCCCCATAATTTAGATACCATATTATTACTATTATTATTATTA ATGGCGAACTTGATGACGATGATGAACATGAACCAGTGTGGGTCTAAACCTGCATGGCTTCAAGCCCTTATGGCCGACACTTTCTTTGGAACTTGCTTGCTTCATGAGAACCGCCGCAAGTCCGAGAAGAACGTTTTTTGCTTGCATTGTTGTCTTAGTATTTGCCCTCACTGTCTTCCTTCTCACCGTTCTCATCCTCTTCTTCAGGTCAGACGATATGTTTATCATGATGTAATTCGATTGGGGGATCTTGAGAAGCTTATTGACTGTTCTCATATTCAGCCGTACACTATAAACGGAGCCAAAGTGATATTTTTGAATTACAGGCCACAATCTAGGCCATGCAAAGCAGGCTCTTCAACCAATGCTTGTTTCACTTGTGATAGAATTCTTCAAGAACCCTTCCATTTCTGCTCTCTCTCCTGCAAGGTGGATCACATGGTGTATCAAGGGGAAGATTTATATAGTATTCTACACAGGTTCAACGAATCGGATTTCTCCTACTCTCAATTCGAAGGATTAAGAGTTGATGGACTGGAAGGAATGGAAGAAGATGGTCAAATGACACCAAATTCCGTCGTAGAGGATTCATCACAACACTTCAACAAATCCTCATCTTGTTCCAATATGAACGACTCAGCTCCCACAAATGTGTCATCAGGAACTCACATCTTCAAAAGAAAAAACAAAGGCACCGATTTTCTTCCCGCCGGAATTGTTCTATCTCTCAGCAGCCGAAGAAAAGGCGCCCCTCAAAGGGCTCCTCTCTCTTAA ATGGCGAACTTGATGACGATGATGAACATGAACCAGTGTGGGTCTAAACCTGCATGGCTTCAAGCCCTTATGGCCGACACTTTCTTTGGAACTTGCTTGCTTCATGAGAACCGCCGCAAGTCCGAGAAGAACGTTTTTTGCTTGCATTGTTGTCTTAGTATTTGCCCTCACTGTCTTCCTTCTCACCGTTCTCATCCTCTTCTTCAGGTCAGACGATATGTTTATCATGATGTAATTCGATTGGGGGATCTTGAGAAGCTTATTGACTGTTCTCATATTCAGCCGTACACTATAAACGGAGCCAAAGTGATATTTTTGAATTACAGGCCACAATCTAGGCCATGCAAAGCAGGCTCTTCAACCAATGCTTGTTTCACTTGTGATAGAATTCTTCAAGAACCCTTCCATTTCTGCTCTCTCTCCTGCAAGGTGGATCACATGGTGTATCAAGGGGAAGATTTATATAGTATTCTACACAGGTTCAACGAATCGGATTTCTCCTACTCTCAATTCGAAGGATTAAGAGTTGATGGACTGGAAGGAATGGAAGAAGATGGTCAAATGACACCAAATTCCGTCGTAGAGGATTCATCACAACACTTCAACAAATCCTCATCTTGTTCCAATATGAACGACTCAGCTCCCACAAATGTGTCATCAGGAACTCACATCTTCAAAAGAAAAAACAAAGGCACCGATTTTCTTCCCGCCGGAATTGTTCTATCTCTCAGCAGCCGAAGAAAAGGCGCCCCTCAAAGGGCTCCTCTCTCTTAA MANLMTMMNMNQCGSKPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLPSHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSSTNACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRVDGLEGMEEDGQMTPNSVVEDSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPLS*
BLAST of Csa1G056980 vs. TrEMBL
Match: A0A0A0LUK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G056980 PE=4 SV=1) HSP 1 Score: 540.8 bits (1392), Expect = 9.0e-151 Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 1
BLAST of Csa1G056980 vs. TrEMBL
Match: M5WPE5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024886mg PE=4 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 4.7e-99 Identity = 180/242 (74.38%), Postives = 204/242 (84.30%), Query Frame = 1
BLAST of Csa1G056980 vs. TrEMBL
Match: B9T6S3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0434530 PE=4 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 1.8e-95 Identity = 176/251 (70.12%), Postives = 202/251 (80.48%), Query Frame = 1
BLAST of Csa1G056980 vs. TrEMBL
Match: A0A061DWT2_THECC (PLATZ transcription factor family protein OS=Theobroma cacao GN=TCM_006017 PE=4 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 1.0e-93 Identity = 173/242 (71.49%), Postives = 202/242 (83.47%), Query Frame = 1
BLAST of Csa1G056980 vs. TrEMBL
Match: V4UCJ2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016385mg PE=4 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 9.5e-92 Identity = 175/253 (69.17%), Postives = 205/253 (81.03%), Query Frame = 1
BLAST of Csa1G056980 vs. TAIR10
Match: AT1G31040.1 (AT1G31040.1 PLATZ transcription factor family protein) HSP 1 Score: 298.5 bits (763), Expect = 3.9e-81 Identity = 151/251 (60.16%), Postives = 177/251 (70.52%), Query Frame = 1
BLAST of Csa1G056980 vs. TAIR10
Match: AT2G12646.1 (AT2G12646.1 PLATZ transcription factor family protein) HSP 1 Score: 202.6 bits (514), Expect = 2.9e-52 Identity = 111/255 (43.53%), Postives = 145/255 (56.86%), Query Frame = 1
BLAST of Csa1G056980 vs. TAIR10
Match: AT3G60670.1 (AT3G60670.1 PLATZ transcription factor family protein) HSP 1 Score: 191.0 bits (484), Expect = 8.9e-49 Identity = 100/245 (40.82%), Postives = 136/245 (55.51%), Query Frame = 1
BLAST of Csa1G056980 vs. TAIR10
Match: AT1G76590.1 (AT1G76590.1 PLATZ transcription factor family protein) HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30 Identity = 87/248 (35.08%), Postives = 123/248 (49.60%), Query Frame = 1
BLAST of Csa1G056980 vs. TAIR10
Match: AT1G32700.1 (AT1G32700.1 PLATZ transcription factor family protein) HSP 1 Score: 128.6 bits (322), Expect = 5.4e-30 Identity = 65/154 (42.21%), Postives = 90/154 (58.44%), Query Frame = 1
BLAST of Csa1G056980 vs. NCBI nr
Match: gi|778658266|ref|XP_011652401.1| (PREDICTED: uncharacterized protein LOC101205397 [Cucumis sativus]) HSP 1 Score: 540.8 bits (1392), Expect = 1.3e-150 Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 1
BLAST of Csa1G056980 vs. NCBI nr
Match: gi|645238880|ref|XP_008225885.1| (PREDICTED: uncharacterized protein LOC103325490 [Prunus mume]) HSP 1 Score: 369.0 bits (946), Expect = 6.7e-99 Identity = 181/242 (74.79%), Postives = 204/242 (84.30%), Query Frame = 1
BLAST of Csa1G056980 vs. NCBI nr
Match: gi|595912437|ref|XP_007214443.1| (hypothetical protein PRUPE_ppa024886mg [Prunus persica]) HSP 1 Score: 369.0 bits (946), Expect = 6.7e-99 Identity = 180/242 (74.38%), Postives = 204/242 (84.30%), Query Frame = 1
BLAST of Csa1G056980 vs. NCBI nr
Match: gi|1009109597|ref|XP_015891012.1| (PREDICTED: uncharacterized protein LOC107425516 [Ziziphus jujuba]) HSP 1 Score: 365.2 bits (936), Expect = 9.7e-98 Identity = 180/249 (72.29%), Postives = 208/249 (83.53%), Query Frame = 1
BLAST of Csa1G056980 vs. NCBI nr
Match: gi|255586620|ref|XP_002533942.1| (PREDICTED: uncharacterized protein LOC8263599 [Ricinus communis]) HSP 1 Score: 357.1 bits (915), Expect = 2.6e-95 Identity = 176/251 (70.12%), Postives = 202/251 (80.48%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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