Carg06828 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg06828
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	PLATZ transcription factor family protein
Location	Cucurbita_argyrosperma_scaffold_012 : 1252744 .. 1254365 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCAAGCCTGCATGGCTTCAGGCTCTCATGGCCGAGACCTTCTTTGGCACTTGCTTGCTTCATGAGAACCGCCGCAAGTCCGAGAAGAATGTGTTTTGTTTGCATTGTTGTCTTAGTATTTGTCCTCACTGCCTCTCTTCTCACCGTGCTCATCCTCTTCTTCAGGTATTCATCTATTTGATTTTGTTCTTGATTTTTTATGGGTTTTTCACTAATTTTAATGGGGTTTTCGTAATTTTTAATGGGTTTTTGCAAAATTTGTTCTTGATTTGATGGGTTTTTCATGAATTTTAATGGGGTTTTCTCAAAATTTGTTCTTTTTTTGAGGCTGGAAACTTATCCAACTTTTGAGATTTGGTTGGGTTCCTATTCGTGGATGACTCCATTTTTATCCAATCTTCCTGCCAGAGCTCTCTCAGTTGTTGCTTTCGCTCAACTTTTGTCCGTTAGGAATCACGACTCTCGACATAAGCTCTCGTGGGTTTGTTCTTGATTTTTCCAAACATCTTATACTAATGAAAATAGTATTGCTTACTTCTAAACCCATGATCAACTCCATAATTAGCCTATGTGGGACGTACTTTCACTAAATTCTTGTCTTTTAGGAACTATAATTCTACACAATGACACAATGTTGTCCACTTTGAGCCTAAGTTCTCGTGATTTTGCTTTTAGTTTTTCCAAAAGGTCTTATAATACGGATGTATTCTTTACTTGTAAATCTATGATCAACTCCTTAATTAGCTAAAGTGGGACACGTTTTCATATCTCATAGGAACTACGACGGTTCACAATCGTACGATATTATTCGCATAAGTTTTCATAGCTTTACTTTAGATTCCTCATAAGCCTTCGTACCTTGGTACCAATAGAGATAGTATAGTTGACATGGAACTCTTTCTCCTAACAATCCTCGACATTGTCTATTAATTTTGAGATTACAATCATGATTAACAACGGATTAAACGAAATGGGTTTGTGTTCATCAGGTTAGACGATACGTTTACCACGACGTAATTCGATTGGGCGATCTCGAAAAGCTCATAGACTGTTCCCATATTCAGGTAAATTCTCTTCCAAACCAAATTTAACAAATTGGGTTATGATAATTAACCATAAAGTTCCAATCTTTGCAGCCCTACACCATAAACGGAGCCAAAGTTATATTCTTGAATTACAGGCCACAATCAAGGCCATGCAAACAAGGCTCATCAAACGCTTGCTTCACCTGCGACAGAATTCTCCAAGAACCCTTCCATTTTTGCTCTCTTTCTTGCAAAGTGGATCACATGGTGTTCCAAGGCCAAGATTTATGCGAGATCCTCCACAGGTTCGACGAGTCCGATTTCTCTTACTCCCAATTCGAATCCCTTCGAATGGACGGACTAGAGGGTATCGACGACGATGCCGCCGCCGCCGCCGCCGGCGGCGGCTGCGGCGGCACACCGAATTCCATGGTGGAAGAACCACCGCAGTTCAACAAAGCCTCGTCTTGCTCGGAGGGTACTCATATCTTTAAAAGAAAGAACAAAGGCACTGATTTTCTTCCCGCCGGCATCGTTTTGTCGCTCAGTAGTAGAAGGAAGGGCGCCCCTCAAAGGGCGCCGCTTTCTTGA

mRNA sequence

ATGGCTGCCAAGCCTGCATGGCTTCAGGCTCTCATGGCCGAGACCTTCTTTGGCACTTGCTTGCTTCATGAGAACCGCCGCAAGTCCGAGAAGAATGTGTTTTGTTTGCATTGTTGTCTTAGTATTTGTCCTCACTGCCTCTCTTCTCACCGTGCTCATCCTCTTCTTCAGGTTAGACGATACGTTTACCACGACGTAATTCGATTGGGCGATCTCGAAAAGCTCATAGACTGTTCCCATATTCAGCCCTACACCATAAACGGAGCCAAAGTTATATTCTTGAATTACAGGCCACAATCAAGGCCATGCAAACAAGGCTCATCAAACGCTTGCTTCACCTGCGACAGAATTCTCCAAGAACCCTTCCATTTTTGCTCTCTTTCTTGCAAAGTGGATCACATGGTGTTCCAAGGCCAAGATTTATGCGAGATCCTCCACAGGTTCGACGAGTCCGATTTCTCTTACTCCCAATTCGAATCCCTTCGAATGGACGGACTAGAGGGTATCGACGACGATGCCGCCGCCGCCGCCGCCGGCGGCGGCTGCGGCGGCACACCGAATTCCATGGTGGAAGAACCACCGCAGTTCAACAAAGCCTCGTCTTGCTCGGAGGGTACTCATATCTTTAAAAGAAAGAACAAAGGCACTGATTTTCTTCCCGCCGGCATCGTTTTGTCGCTCAGTAGTAGAAGGAAGGGCGCCCCTCAAAGGGCGCCGCTTTCTTGA

Coding sequence (CDS)

ATGGCTGCCAAGCCTGCATGGCTTCAGGCTCTCATGGCCGAGACCTTCTTTGGCACTTGCTTGCTTCATGAGAACCGCCGCAAGTCCGAGAAGAATGTGTTTTGTTTGCATTGTTGTCTTAGTATTTGTCCTCACTGCCTCTCTTCTCACCGTGCTCATCCTCTTCTTCAGGTTAGACGATACGTTTACCACGACGTAATTCGATTGGGCGATCTCGAAAAGCTCATAGACTGTTCCCATATTCAGCCCTACACCATAAACGGAGCCAAAGTTATATTCTTGAATTACAGGCCACAATCAAGGCCATGCAAACAAGGCTCATCAAACGCTTGCTTCACCTGCGACAGAATTCTCCAAGAACCCTTCCATTTTTGCTCTCTTTCTTGCAAAGTGGATCACATGGTGTTCCAAGGCCAAGATTTATGCGAGATCCTCCACAGGTTCGACGAGTCCGATTTCTCTTACTCCCAATTCGAATCCCTTCGAATGGACGGACTAGAGGGTATCGACGACGATGCCGCCGCCGCCGCCGCCGGCGGCGGCTGCGGCGGCACACCGAATTCCATGGTGGAAGAACCACCGCAGTTCAACAAAGCCTCGTCTTGCTCGGAGGGTACTCATATCTTTAAAAGAAAGAACAAAGGCACTGATTTTCTTCCCGCCGGCATCGTTTTGTCGCTCAGTAGTAGAAGGAAGGGCGCCCCTCAAAGGGCGCCGCTTTCTTGA

Protein sequence

MAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQEPFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDDDAAAAAAGGGCGGTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPLS

Homology

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BLAST of Carg06828 vs. NCBI nr
Match: XP_022954838.1 (uncharacterized protein LOC111456982 [Cucurbita moschata])

HSP 1 Score: 446.4 bits (1147), Expect = 6.0e-122
Identity = 221/241 (91.70%), Postives = 221/241 (91.70%), Query Frame = 0


Query: 1   MAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRR 60
           MAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRR
Sbjct: 10  MAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRR 69

Query: 61  YVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQE 120
           YVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQE
Sbjct: 70  YVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQE 129

Query: 121 PFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDXXXXXXXXXX 180
           PFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGID     XXXX 
Sbjct: 130 PFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGID-DEAAXXXXG 189

Query: 181 XXXXXXXXXXXXXXQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPL 240
                         QFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPL
Sbjct: 190 SCGGTPNSMVEEPQQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPL 249

Query: 241 S 242
           S
Sbjct: 250 S 249

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BLAST of Carg06828 vs. NCBI nr
Match: XP_023542746.1 (uncharacterized protein LOC111802565 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 446.4 bits (1147), Expect = 6.0e-122
Identity = 238/241 (98.76%), Postives = 238/241 (98.76%), Query Frame = 0


Query: 1   MAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRR 60
           MAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRR
Sbjct: 10  MAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRR 69

Query: 61  YVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQE 120
           YVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQE
Sbjct: 70  YVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQE 129

Query: 121 PFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDXXXXXXXXXX 180
           PFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGID XXXXXXXXX
Sbjct: 130 PFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGID-XXXXXXXXX 189

Query: 181 XXXXXXXXXXXXXXQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPL 240
           XXXXXXXXXXXX  QFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPL
Sbjct: 190 XXXXXXXXXXXXPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPL 249

Query: 241 S 242
           S
Sbjct: 250 S 249

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BLAST of Carg06828 vs. NCBI nr
Match: XP_022994454.1 (uncharacterized protein LOC111490171 [Cucurbita maxima])

HSP 1 Score: 444.9 bits (1143), Expect = 1.8e-121
Identity = 222/241 (92.12%), Postives = 222/241 (92.12%), Query Frame = 0


Query: 1   MAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRR 60
           MAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRR
Sbjct: 10  MAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRR 69

Query: 61  YVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQE 120
           YVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQE
Sbjct: 70  YVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQE 129

Query: 121 PFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDXXXXXXXXXX 180
           PFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFE LRMDGLEGID      XXXX
Sbjct: 130 PFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFEGLRMDGLEGID-----DXXXX 189

Query: 181 XXXXXXXXXXXXXXQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPL 240
           XX            QFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPL
Sbjct: 190 XXQMTPNSMVEEPPQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPL 245

Query: 241 S 242
           S
Sbjct: 250 S 245

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BLAST of Carg06828 vs. NCBI nr
Match: XP_022137485.1 (uncharacterized protein LOC111008916 [Momordica charantia])

HSP 1 Score: 419.5 bits (1077), Expect = 7.9e-114
Identity = 207/255 (81.18%), Postives = 212/255 (83.14%), Query Frame = 0


Query: 1   MAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRR 60
           MA KPAWLQALMAETFFGTCLLHENRRKSEKNVFCL+CCLSICPHCL SHR+HPLLQVRR
Sbjct: 19  MAGKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLNCCLSICPHCLPSHRSHPLLQVRR 78

Query: 61  YVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQE 120
           YVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQE
Sbjct: 79  YVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQE 138

Query: 121 PFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDXXXXXXXXXX 180
           PFHFCSLSCKVDHMV+QG+DLC ILHRFDESDFSYSQFE LR+DGLEGID          
Sbjct: 139 PFHFCSLSCKVDHMVYQGEDLCGILHRFDESDFSYSQFEGLRVDGLEGID---------D 198

Query: 181 XXXXXXXXXXXXXXQFNKASSC--------------SEGTHIFKRKNKGTDFLPAGIVLS 240
                         QFNKASSC              S GTHIFKRKNKGTDFLPAGIVLS
Sbjct: 199 DGQMTPNSGVEDPSQFNKASSCSNMSELAPTNNSVVSSGTHIFKRKNKGTDFLPAGIVLS 258

Query: 241 LSSRRKGAPQRAPLS 242
           LSSRRKGAPQRAPLS
Sbjct: 259 LSSRRKGAPQRAPLS 264

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BLAST of Carg06828 vs. NCBI nr
Match: XP_011652401.1 (PREDICTED: uncharacterized protein LOC101205397 [Cucumis sativus] >KGN64462.1 hypothetical protein Csa_1G056980 [Cucumis sativus])

HSP 1 Score: 401.0 bits (1029), Expect = 2.9e-108
Identity = 198/251 (78.88%), Postives = 208/251 (82.87%), Query Frame = 0


Query: 3   AKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRRYV 62
           +KPAWLQALMA+TFFGTCLLHENRRKSEKNVFCLHCCLSICPHCL SHR+HPLLQVRRYV
Sbjct: 15  SKPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLPSHRSHPLLQVRRYV 74

Query: 63  YHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSS-NACFTCDRILQEP 122
           YHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCK GSS NACFTCDRILQEP
Sbjct: 75  YHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSSTNACFTCDRILQEP 134

Query: 123 FHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDXXXXXXXXXXX 182
           FHFCSLSCKVDHMV+QG+DL  ILHRF+ESDFSYSQFE LR+DGLEG++           
Sbjct: 135 FHFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRVDGLEGME--------EDG 194

Query: 183 XXXXXXXXXXXXXQFNKASSC-----------SEGTHIFKRKNKGTDFLPAGIVLSLSSR 242
                         FNK+SSC           S GTHIFKRKNKGTDFLPAGIVLSLSSR
Sbjct: 195 QMTPNSVVEDSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLPAGIVLSLSSR 254

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BLAST of Carg06828 vs. TAIR10
Match: AT1G31040.1 (PLATZ transcription factor family protein)

HSP 1 Score: 274.6 bits (701), Expect = 5.7e-74
Identity = 144/238 (60.50%), Postives = 166/238 (69.75%), Query Frame = 0


Query: 4   KPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRRYVY 63
           KPAWL+ LMAETFF +C +HE RRKSEKNVFCL CCLS+CPHCL SHR+HPLLQVRRYVY
Sbjct: 18  KPAWLEGLMAETFFSSCGIHETRRKSEKNVFCLLCCLSVCPHCLPSHRSHPLLQVRRYVY 77

Query: 64  HDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQEPFH 123
           HDV+RL DLEKLIDCS++QPYTINGAKVIFLN R QSR   + SSN CFTCDRILQEPFH
Sbjct: 78  HDVVRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQSR--AKVSSNVCFTCDRILQEPFH 137

Query: 124 FCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDXXXXXXXXXXXXX 183
           FCSLSCKVD++ +QG DL  IL+R DESDF+   FE LRMDG + +              
Sbjct: 138 FCSLSCKVDYLSYQGDDLSSILYRIDESDFT---FEGLRMDGHDQL-------GEISTME 197

Query: 184 XXXXXXXXXXXQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPLS 242
                 XXXXX                     +++LP  ++ SL +RRKGAP RAP S
Sbjct: 198 DGEDILXXXXXXXXXXXXXXXXXXXXXXXXXXSNYLPGMVLSSLGNRRKGAPHRAPFS 243

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BLAST of Carg06828 vs. TAIR10
Match: AT2G12646.1 (PLATZ transcription factor family protein)

HSP 1 Score: 189.5 bits (480), Expect = 2.4e-48
Identity = 130/257 (50.58%), Postives = 164/257 (63.81%), Query Frame = 0


Query: 4   KPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRRYVY 63
           KPAWL AL AE FF  C  HE  +K+E+NV CL CC S+CPHC+ SHR H LLQVRRYVY
Sbjct: 5   KPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYVY 64

Query: 64  HDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQEPFH 123
           HDV+RL DL+KLIDCS++Q YTIN AKV+F+  RPQ+R  K G+ N C +CDR LQEP+ 
Sbjct: 65  HDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFK-GAGNYCTSCDRSLQEPYI 124

Query: 124 FCSLSCKVDHMVFQGQDLCEIL---HRF--------------DESDFSYSQFESLRMDGL 183
            CSL CKVD ++ + +D+   L   H                D+   +Y    S  +DG 
Sbjct: 125 HCSLGCKVDFVMKRYRDITPFLKPCHTLTLGPDYIIPQDLLTDDEVAAYETPRSTVVDGD 184

Query: 184 EGIDXXXXXXXXXXXXXXXXXXXXXXXXQFNKASS---CSEGTHIFKRKNKGTDFLPAGI 241
           E +  XXXXXXXXXXXXXXXXXXXXXXX     +    C++  + +K  ++  D + A I
Sbjct: 185 ESMSWXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGFCLCAKSANSYKEVSEDPDDISACI 244

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BLAST of Carg06828 vs. TAIR10
Match: AT3G60670.1 (PLATZ transcription factor family protein)

HSP 1 Score: 184.1 bits (466), Expect = 1.0e-46
Identity = 83/152 (54.61%), Postives = 108/152 (71.05%), Query Frame = 0


Query: 5   PAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRRYVYH 64
           PAWL+ L+ + FF  CL HE+ +K+EKN+ C+ CCL+ICPHCLSSH +H LLQ+RRYVY 
Sbjct: 7   PAWLEVLLKDKFFNACLDHEDDKKNEKNILCIDCCLTICPHCLSSHTSHRLLQIRRYVYR 66

Query: 65  DVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQEPFHF 124
           DV+R+ D  KL+DCS IQPYT N +KV+F+N RPQSR  + GS N C TCDR LQ P+ F
Sbjct: 67  DVLRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFR-GSGNICITCDRSLQSPYLF 126

Query: 125 CSLSCKVDHMVFQGQDL------CEILHRFDE 151
           C LSCK+  ++ + + L      C +L   DE
Sbjct: 127 CCLSCKISDVIMRQRGLSGFLRVCNVLDLTDE 157

[Close]

BLAST of Carg06828 vs. TAIR10
Match: AT1G32700.1 (PLATZ transcription factor family protein)

HSP 1 Score: 134.8 bits (338), Expect = 7.0e-32
Identity = 69/153 (45.10%), Postives = 93/153 (60.78%), Query Frame = 0


Query: 5   PAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLS-ICPHCLSSHRAHPLLQVRRYVY 64
           P WL+ L+ E FF  C LH +  KSE N++CL C    +C  CLS H+ H  +Q+RR  Y
Sbjct: 12  PHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDHHAIQIRRSSY 71

Query: 65  HDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQEPFH 124
           HDVIR+ +++K +D + +Q Y IN AKV+FLN RPQ RP K G  N C  C R L + F 
Sbjct: 72  HDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGK-GVINTCEVCYRSLVDSFR 131

Query: 125 FCSLSCKVDHMVFQGQDLCEILHRFDESDFSYS 157
           FCSL CK+  +  + +   E  +   +SD SYS
Sbjct: 132 FCSLGCKISGISKKKRK--EWTNNLSDSDDSYS 161

[Close]

BLAST of Carg06828 vs. TAIR10
Match: AT2G01818.1 (PLATZ transcription factor family protein)

HSP 1 Score: 129.0 bits (323), Expect = 3.9e-30
Identity = 64/138 (46.38%), Postives = 87/138 (63.04%), Query Frame = 0


Query: 3   AKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLS----SHRAHPLLQV 62
           ++  W++ L+   FFG C+ H+  RK+EKNVFC+ C + IC HC +    SH  H  LQ+
Sbjct: 9   SEEVWIETLLNSEFFGICMNHKYLRKNEKNVFCIDCNVEICRHCCNTVTDSHFLHRRLQI 68

Query: 63  RRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQ---SRPCKQGSSNA-CFTC 122
            +YVY DVIRL +++   DCS IQ Y ING K I LN RPQ   +RP  +  + A C TC
Sbjct: 69  CKYVYQDVIRLLEIQNYFDCSEIQTYKINGEKAIHLNSRPQAKDARPSTKAKNGASCVTC 128

Query: 123 DRILQE-PFHFCSLSCKV 132
            R +Q+ P  FCS+SCK+
Sbjct: 129 KRYIQDHPNLFCSISCKI 146

[Close]

BLAST of Carg06828 vs. TrEMBL
Match: tr|A0A0A0LUK6|A0A0A0LUK6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G056980 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.9e-108
Identity = 198/251 (78.88%), Postives = 208/251 (82.87%), Query Frame = 0


Query: 3   AKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRRYV 62
           +KPAWLQALMA+TFFGTCLLHENRRKSEKNVFCLHCCLSICPHCL SHR+HPLLQVRRYV
Sbjct: 15  SKPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLPSHRSHPLLQVRRYV 74

Query: 63  YHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSS-NACFTCDRILQEP 122
           YHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCK GSS NACFTCDRILQEP
Sbjct: 75  YHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSSTNACFTCDRILQEP 134

Query: 123 FHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDXXXXXXXXXXX 182
           FHFCSLSCKVDHMV+QG+DL  ILHRF+ESDFSYSQFE LR+DGLEG++           
Sbjct: 135 FHFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRVDGLEGME--------EDG 194

Query: 183 XXXXXXXXXXXXXQFNKASSC-----------SEGTHIFKRKNKGTDFLPAGIVLSLSSR 242
                         FNK+SSC           S GTHIFKRKNKGTDFLPAGIVLSLSSR
Sbjct: 195 QMTPNSVVEDSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLPAGIVLSLSSR 254

[Close]

BLAST of Carg06828 vs. TrEMBL
Match: tr|M5WPE5|M5WPE5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa024886mg PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 7.3e-92
Identity = 169/239 (70.71%), Postives = 187/239 (78.24%), Query Frame = 0


Query: 4   KPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRRYVY 63
           KPAWL+ LMAETFFG C +HENRRK+EKN+FCLHCCLSICPHCL SHR+HPLLQVRRYVY
Sbjct: 2   KPAWLEGLMAETFFGGCGVHENRRKNEKNIFCLHCCLSICPHCLHSHRSHPLLQVRRYVY 61

Query: 64  HDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQEPFH 123
           HDV+RLGDLEKLIDCS+IQPYTINGAKVIFLN RPQSR CKQGS+N C TCDRILQEPFH
Sbjct: 62  HDVVRLGDLEKLIDCSYIQPYTINGAKVIFLNQRPQSRTCKQGSANICLTCDRILQEPFH 121

Query: 124 FCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDXXXXXXXXXXXXX 183
           FCSLSCKVDH+V+QG+DL  IL+RFDESDF+ SQFE LRMDG E ID             
Sbjct: 122 FCSLSCKVDHLVYQGEDLSGILYRFDESDFTISQFEGLRMDGSEVIDDDGHMIPSSIIED 181

Query: 184 XXXXXXXXXXXQFNKASSCSEGTHIF-KRKNKGTDFLPAGIVLSLSSRRKGAPQRAPLS 242
                      +    S  S+   +  K+K KG+ FLP GIVLSLSSRRKGAPQRAPLS
Sbjct: 182 PLQYRASSCSNEATSDSVMSQEPEVIKKKKKKGSGFLP-GIVLSLSSRRKGAPQRAPLS 239

[Close]

BLAST of Carg06828 vs. TrEMBL
Match: tr|A0A251PJ66|A0A251PJ66_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G115600 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 7.3e-92
Identity = 169/239 (70.71%), Postives = 187/239 (78.24%), Query Frame = 0


Query: 4   KPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRRYVY 63
           KPAWL+ LMAETFFG C +HENRRK+EKN+FCLHCCLSICPHCL SHR+HPLLQVRRYVY
Sbjct: 33  KPAWLEGLMAETFFGGCGVHENRRKNEKNIFCLHCCLSICPHCLHSHRSHPLLQVRRYVY 92

Query: 64  HDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQEPFH 123
           HDV+RLGDLEKLIDCS+IQPYTINGAKVIFLN RPQSR CKQGS+N C TCDRILQEPFH
Sbjct: 93  HDVVRLGDLEKLIDCSYIQPYTINGAKVIFLNQRPQSRTCKQGSANICLTCDRILQEPFH 152

Query: 124 FCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDXXXXXXXXXXXXX 183
           FCSLSCKVDH+V+QG+DL  IL+RFDESDF+ SQFE LRMDG E ID             
Sbjct: 153 FCSLSCKVDHLVYQGEDLSGILYRFDESDFTISQFEGLRMDGSEVIDDDGHMIPSSIIED 212

Query: 184 XXXXXXXXXXXQFNKASSCSEGTHIF-KRKNKGTDFLPAGIVLSLSSRRKGAPQRAPLS 242
                      +    S  S+   +  K+K KG+ FLP GIVLSLSSRRKGAPQRAPLS
Sbjct: 213 PLQYRASSCSNEATSDSVMSQEPEVIKKKKKKGSGFLP-GIVLSLSSRRKGAPQRAPLS 270

[Close]

BLAST of Carg06828 vs. TrEMBL
Match: tr|A0A2I4GQ76|A0A2I4GQ76_9ROSI (uncharacterized protein LOC109002524 OS=Juglans regia OX=51240 GN=LOC109009870 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 2.2e-88
Identity = 166/241 (68.88%), Postives = 183/241 (75.93%), Query Frame = 0


Query: 1   MAAKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRR 60
           M+ KPAWL+ LMAETFFG C +HENRRK+EKNVFCLHCC+SICPHCL SHR+HPLLQVRR
Sbjct: 17  MSMKPAWLEGLMAETFFGGCGVHENRRKNEKNVFCLHCCVSICPHCLPSHRSHPLLQVRR 76

Query: 61  YVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQE 120
           YVYHDV+RLGDLEKLIDCS+IQPYTIN AKVIFLN RPQSR CK GS+N C TCDRILQE
Sbjct: 77  YVYHDVVRLGDLEKLIDCSYIQPYTINSAKVIFLNQRPQSRSCK-GSANICLTCDRILQE 136

Query: 121 PFHFCSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDXXXXXXXXXX 180
           PFHFCSLSCKVDH V+QG+DL  IL+RFDESDF+ SQFE L+MDG E ID          
Sbjct: 137 PFHFCSLSCKVDHKVYQGEDLSSILYRFDESDFAISQFEGLQMDGSEIIDDDGQITTSSI 196

Query: 181 XXXXXXXXXXXXXXQFNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPL 240
                         +    S  S    + K+K KG   LP GIVLSLSSRRKGAPQRAPL
Sbjct: 197 LEEPLQYRSSSCSNEATSNSVISREPEMVKKKKKGHGLLP-GIVLSLSSRRKGAPQRAPL 255

Query: 241 S 242
           S
Sbjct: 257 S 255

[Close]

BLAST of Carg06828 vs. TrEMBL
Match: tr|A0A2N9H291|A0A2N9H291_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33592 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 6.4e-88
Identity = 167/240 (69.58%), Postives = 182/240 (75.83%), Query Frame = 0


Query: 5   PAWLQALMAETFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLSSHRAHPLLQVRRYVYH 64
           PAWL+ LMAETFFG C +HENRRK+EKNVFCLHCCLSICPHCL SH +HPLLQVRRYVYH
Sbjct: 36  PAWLEGLMAETFFGACGVHENRRKNEKNVFCLHCCLSICPHCLPSHASHPLLQVRRYVYH 95

Query: 65  DVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSNACFTCDRILQEPFHF 124
           DV+RLGDLEKLIDCS+IQPYTIN AKVIFLN RPQSR CK GS+N C TCDRILQEPFHF
Sbjct: 96  DVVRLGDLEKLIDCSYIQPYTINSAKVIFLNQRPQSRSCK-GSANICLTCDRILQEPFHF 155

Query: 125 CSLSCKVDHMVFQGQDLCEILHRFDESDFSYSQFESLRMDGLEGIDXXXXXXXXXXXXXX 184
           CSLSCKVDHMV+QG+DL  IL++FDESDF+ SQFE LRMDG E ID              
Sbjct: 156 CSLSCKVDHMVYQGEDLSSILYKFDESDFAISQFEGLRMDGSEIIDDDGQITTTSIVLEE 215

Query: 185 XXXXXXXXXXQ---FNKASSCSEGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPLS 242
                          N   SC  G  + K+K KG  FLP GIVL+LSSRRKGAPQRAPLS
Sbjct: 216 PLPYKGSSCSNEATSNSIISCEPGEEV-KKKKKGRGFLP-GIVLNLSSRRKGAPQRAPLS 272

The following BLAST results are available for this feature:

BLAST of Carg06828 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954838.1	6.0e-122	91.70	uncharacterized protein LOC111456982 [Cucurbita moschata]	[more]
XP_023542746.1	6.0e-122	98.76	uncharacterized protein LOC111802565 [Cucurbita pepo subsp. pepo]	[more]
XP_022994454.1	1.8e-121	92.12	uncharacterized protein LOC111490171 [Cucurbita maxima]	[more]
XP_022137485.1	7.9e-114	81.18	uncharacterized protein LOC111008916 [Momordica charantia]	[more]
XP_011652401.1	2.9e-108	78.88	PREDICTED: uncharacterized protein LOC101205397 [Cucumis sativus] >KGN64462.1 hy...	[more]

BLAST of Carg06828 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31040.1	5.7e-74	60.50	PLATZ transcription factor family protein	[more]
AT2G12646.1	2.4e-48	50.58	PLATZ transcription factor family protein	[more]
AT3G60670.1	1.0e-46	54.61	PLATZ transcription factor family protein	[more]
AT1G32700.1	7.0e-32	45.10	PLATZ transcription factor family protein	[more]
AT2G01818.1	3.9e-30	46.38	PLATZ transcription factor family protein	[more]

BLAST of Carg06828 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg06828 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LUK6\|A0A0A0LUK6_CUCSA	1.9e-108	78.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G056980 PE=4 SV=1	[more]
tr\|M5WPE5\|M5WPE5_PRUPE	7.3e-92	70.71	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa024886mg PE=4 SV=1	[more]
tr\|A0A251PJ66\|A0A251PJ66_PRUPE	7.3e-92	70.71	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G115600 PE=4 SV=1	[more]
tr\|A0A2I4GQ76\|A0A2I4GQ76_9ROSI	2.2e-88	68.88	uncharacterized protein LOC109002524 OS=Juglans regia OX=51240 GN=LOC109009870 P...	[more]
tr\|A0A2N9H291\|A0A2N9H291_FAGSY	6.4e-88	69.58	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33592 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006734	DUF597

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06828-RA	Carg06828-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	Protein of unknown function DUF597	PFAM	PF04640	PLATZ	coord: 59..131 e-value: 4.9E-27 score: 94.3
None	No IPR available	PANTHER	PTHR31065	FAMILY NOT NAMED	coord: 1..241
None	No IPR available	PANTHER	PTHR31065:SF32	SUBFAMILY NOT NAMED	coord: 1..241

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg06828	Cla019334	Watermelon (97103) v1	carwmB0489
Carg06828	Csa1G056980	Cucumber (Chinese Long) v2	carcuB0523
Carg06828	MELO3C002404	Melon (DHL92) v3.5.1	carmeB0499
Carg06828	ClCG03G004210	Watermelon (Charleston Gray)	carwcgB0480
Carg06828	CSPI01G10070	Wild cucumber (PI 183967)	carcpiB0531
Carg06828	Cucsa.134530	Cucumber (Gy14) v1	carcgyB0569
Carg06828	CmaCh13G008460	Cucurbita maxima (Rimu)	carcmaB0689
Carg06828	CmaCh18G002840	Cucurbita maxima (Rimu)	carcmaB0693
Carg06828	Lsi02G005440	Bottle gourd (USVL1VR-Ls)	carlsiB447
Carg06828	Cp4.1LG09g09300	Cucurbita pepo (Zucchini)	carcpeB0694
Carg06828	Cp4.1LG20g02750	Cucurbita pepo (Zucchini)	carcpeB0698
Carg06828	CsGy1G010100	Cucumber (Gy14) v2	carcgybB0500
Carg06828	MELO3C002404.2	Melon (DHL92) v3.6.1	carmedB0504
Carg06828	CsaV3_1G010140	Cucumber (Chinese Long) v3	carcucB0529
Carg06828	Cla97C03G055370	Watermelon (97103) v2	carwmbB0517
Carg06828	BhiUN316G58	Wax gourd	carwgoB0599

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg06828	Carg07639	Silver-seed gourd	carcarB481

The following block(s) are covering this gene:


Gene	Organism	Block
Carg06828	Cucurbita moschata (Rifu)	carcmoB0670
Carg06828	Cucurbita moschata (Rifu)	carcmoB0673