ClCG03G004210 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAACAATATGATGATGATGAACCACTGTGGCTCCACCATGGGCGCTAAGCCTGCATGGCTTCAGGCTCTTATGGCCGACACTTTCTTTGGGAGTTGTTTGCTTCATGAGAACCGCCGCAAGTCCGAGAAGAACGTTTTTTGCTTACATTGTTGTCTCAGTATTTGCCCTCACTGTCTTCCTTCTCACCGTTCTCATCCTCTTCTTCAGGTATATCCTTTTTTTCTTTTTTTTTTTTTCTTTTTTTTTCTTTTAACATTTTTTTTATAAGAAAAAAAATAATAAAGGAAGGAAGAAAATTAAAACTTATCCTACTTTTGGGATTTGGTTGGTTTCCTATTCGTAGACGACTCCATTTTTATCTATCTTTCCTGCCAGACCTTTCTCACTTGTTGCTTTCACTCAATGTGAACATTTGACTCTTTTGTCCCTCTTTTTTTTTTTTTTTTTTCCTCTCTTTTTAATTAATTAAGATTTCAATTAACGAAATTTTAATGGGGGTGTTTGTCAGGTCAGACGATATGTTTATCATGATGTAATTCGATTGGGGGATCTTGAGAAGCTCATCGACTGTTCCCATATTCAGGTATATATTTATTTATTTCTTTCTTCAATTTTGTTGCTTGATTATTGATTTATGTATAATTAAGGGAGATGTGTTTTGATGAATTGAAAATGATTGAAATTTGGCAGCCCTACACCATCAACGGAGCCAAAGTGATATTTTTGAATTACAGGCCACAATCTAGGCCATGCAAGCAAGGCTCCTCCACCAATGCTTGCTTTACATGTGATAGAATTCTCCAAGAACCCTTCCATTTTTGCTCTCTCTCTTGCAAGGTTTTTCCCTTAATCCCCTCCTAATTTCCCTGCATGCATCCCCTTTTTTTTTAATCTCCATCTATAATATGATTCTAACTCTTAGATTACCATGAATTGTTTCCTTAAATAAAGGCTTGGAACTTATCCCTAATATGATTATACTTTTTAGATTGACTAGTAACCTTTTAGGCGTTTCAACTACTTAACCCATGACTAATATAAATCTATATAAGATAAACATGAAATTGTATCAAAATTAATTCACAATTTAAGAAATATCTCGTTTATCTTATAAAGATTATTCCTTTTCAATGTAAGAAAACTCACACATGCTCCTTCGAGATAGTGTATCTTTTGTTGAAAACTATTTAGATTAGATGCATATTGAGTATCACCTATCTATCTATCATAATTTTTTATGTGTCAAATTCTTCTTATTATTTTTCTAAAATATTTTAATTCTTTTTAGACGTGAGTGATTGGAGGAGATGTATAAAAATAGAGTATTATCCTCTTGTGTTTAAATAACACGTGAAATTTCATCTAAAAATAATTTGAAATAAGAGGAATAACTCATGTATTAGTAACTATTCAGGAAGTTATTTTTACCATCTTTTATACATGGACTAAACTTAAATTTGCATTCATATTACTCAAAGGATATAATATTAAATTTACCCTTCACCCATAATTTTAAGTTTTTGAGTCCATTATTATTTGATGTAACATAATTTTATATGTGATCTAGGAAATTTTGTTTTCAAATTACTGTGATCACAAATTAATATTGATAATTCTTGGTACAATTTATATTTATATTTATATTTATATTTTTTAATTTGATTGAGTTGACGGGTGATTTAACAACGGGCAGGTGGATCACATGGTATATCAAGGTGAAGATTTATACGGGATTCTACACAGGTTCGACGAGTCGGATTTCTCGTACTCGCAATTCGAAGGACTTAGAGTGGATGGGCTGGAAGGAATAGACGAAGATGGTCAAATAACACCAAATTCAGTAGTAGAAGACCCATCACAATTCAACAAAGGCTCATCTTCAGCTCCCCCCAACGTCTCATCAGGAACTCACATTTTCAAAAGAAAAAACAAAGGCACCGATTTCCTTCCCGCCGGCATCGTTCTATCTCTCAGCAGCCGAAGAAAGGGCGCCCCTCAAAGGGCTCCTCTTTCTTAAACCCCCAAAATTCAAATACCATATTAACCATTTAAAAAAAAAAAGTAGATTAAAATAAATAATTTAAGCTCGTGTTTTTTTGTTTTTTTGTTTTGTTTTGTTT ATGGCTAACAATATGATGATGATGAACCACTGTGGCTCCACCATGGGCGCTAAGCCTGCATGGCTTCAGGCTCTTATGGCCGACACTTTCTTTGGGAGTTGTTTGCTTCATGAGAACCGCCGCAAGTCCGAGAAGAACGTTTTTTGCTTACATTGTTGTCTCAGTATTTGCCCTCACTGTCTTCCTTCTCACCGTTCTCATCCTCTTCTTCAGGTCAGACGATATGTTTATCATGATGTAATTCGATTGGGGGATCTTGAGAAGCTCATCGACTGTTCCCATATTCAGCCCTACACCATCAACGGAGCCAAAGTGATATTTTTGAATTACAGGCCACAATCTAGGCCATGCAAGCAAGGCTCCTCCACCAATGCTTGCTTTACATGTGATAGAATTCTCCAAGAACCCTTCCATTTTTGCTCTCTCTCTTGCAAGGTGGATCACATGGTATATCAAGGTGAAGATTTATACGGGATTCTACACAGGTTCGACGAGTCGGATTTCTCGTACTCGCAATTCGAAGGACTTAGAGTGGATGGGCTGGAAGGAATAGACGAAGATGGTCAAATAACACCAAATTCAGTAGTAGAAGACCCATCACAATTCAACAAAGGCTCATCTTCAGCTCCCCCCAACGTCTCATCAGGAACTCACATTTTCAAAAGAAAAAACAAAGGCACCGATTTCCTTCCCGCCGGCATCGTTCTATCTCTCAGCAGCCGAAGAAAGGGCGCCCCTCAAAGGGCTCCTCTTTCTTAAACCCCCAAAATTCAAATACCATATTAACCATTTAAAAAAAAAAAGTAGATTAAAATAAATAATTTAAGCTCGTGTTTTTTTGTTTTTTTGTTTTGTTTTGTTT ATGGCTAACAATATGATGATGATGAACCACTGTGGCTCCACCATGGGCGCTAAGCCTGCATGGCTTCAGGCTCTTATGGCCGACACTTTCTTTGGGAGTTGTTTGCTTCATGAGAACCGCCGCAAGTCCGAGAAGAACGTTTTTTGCTTACATTGTTGTCTCAGTATTTGCCCTCACTGTCTTCCTTCTCACCGTTCTCATCCTCTTCTTCAGGTCAGACGATATGTTTATCATGATGTAATTCGATTGGGGGATCTTGAGAAGCTCATCGACTGTTCCCATATTCAGCCCTACACCATCAACGGAGCCAAAGTGATATTTTTGAATTACAGGCCACAATCTAGGCCATGCAAGCAAGGCTCCTCCACCAATGCTTGCTTTACATGTGATAGAATTCTCCAAGAACCCTTCCATTTTTGCTCTCTCTCTTGCAAGGTGGATCACATGGTATATCAAGGTGAAGATTTATACGGGATTCTACACAGGTTCGACGAGTCGGATTTCTCGTACTCGCAATTCGAAGGACTTAGAGTGGATGGGCTGGAAGGAATAGACGAAGATGGTCAAATAACACCAAATTCAGTAGTAGAAGACCCATCACAATTCAACAAAGGCTCATCTTCAGCTCCCCCCAACGTCTCATCAGGAACTCACATTTTCAAAAGAAAAAACAAAGGCACCGATTTCCTTCCCGCCGGCATCGTTCTATCTCTCAGCAGCCGAAGAAAGGGCGCCCCTCAAAGGGCTCCTCTTTCTTAA MANNMMMMNHCGSTMGAKPAWLQALMADTFFGSCLLHENRRKSEKNVFCLHCCLSICPHCLPSHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGSSTNACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYGILHRFDESDFSYSQFEGLRVDGLEGIDEDGQITPNSVVEDPSQFNKGSSSAPPNVSSGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPLS
BLAST of ClCG03G004210 vs. TrEMBL
Match: A0A0A0LUK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G056980 PE=4 SV=1) HSP 1 Score: 474.6 bits (1220), Expect = 7.7e-131 Identity = 235/261 (90.04%), Postives = 240/261 (91.95%), Query Frame = 1
BLAST of ClCG03G004210 vs. TrEMBL
Match: M5WPE5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024886mg PE=4 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 2.4e-100 Identity = 182/240 (75.83%), Postives = 202/240 (84.17%), Query Frame = 1
BLAST of ClCG03G004210 vs. TrEMBL
Match: B9T6S3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0434530 PE=4 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 1.1e-95 Identity = 177/249 (71.08%), Postives = 198/249 (79.52%), Query Frame = 1
BLAST of ClCG03G004210 vs. TrEMBL
Match: A0A061DWT2_THECC (PLATZ transcription factor family protein OS=Theobroma cacao GN=TCM_006017 PE=4 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 2.0e-94 Identity = 177/244 (72.54%), Postives = 204/244 (83.61%), Query Frame = 1
BLAST of ClCG03G004210 vs. TrEMBL
Match: B9GYA0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s07310g PE=4 SV=2) HSP 1 Score: 349.7 bits (896), Expect = 2.9e-93 Identity = 175/248 (70.56%), Postives = 199/248 (80.24%), Query Frame = 1
BLAST of ClCG03G004210 vs. TAIR10
Match: AT1G31040.1 (AT1G31040.1 PLATZ transcription factor family protein) HSP 1 Score: 300.1 bits (767), Expect = 1.3e-81 Identity = 154/251 (61.35%), Postives = 178/251 (70.92%), Query Frame = 1
BLAST of ClCG03G004210 vs. TAIR10
Match: AT2G12646.1 (AT2G12646.1 PLATZ transcription factor family protein) HSP 1 Score: 195.3 bits (495), Expect = 4.6e-50 Identity = 109/255 (42.75%), Postives = 141/255 (55.29%), Query Frame = 1
BLAST of ClCG03G004210 vs. TAIR10
Match: AT3G60670.1 (AT3G60670.1 PLATZ transcription factor family protein) HSP 1 Score: 189.5 bits (480), Expect = 2.5e-48 Identity = 106/259 (40.93%), Postives = 141/259 (54.44%), Query Frame = 1
BLAST of ClCG03G004210 vs. TAIR10
Match: AT1G43000.1 (AT1G43000.1 PLATZ transcription factor family protein) HSP 1 Score: 129.8 bits (325), Expect = 2.4e-30 Identity = 86/235 (36.60%), Postives = 117/235 (49.79%), Query Frame = 1
BLAST of ClCG03G004210 vs. TAIR10
Match: AT1G32700.1 (AT1G32700.1 PLATZ transcription factor family protein) HSP 1 Score: 129.8 bits (325), Expect = 2.4e-30 Identity = 82/233 (35.19%), Postives = 109/233 (46.78%), Query Frame = 1
BLAST of ClCG03G004210 vs. NCBI nr
Match: gi|778658266|ref|XP_011652401.1| (PREDICTED: uncharacterized protein LOC101205397 [Cucumis sativus]) HSP 1 Score: 474.6 bits (1220), Expect = 1.1e-130 Identity = 235/261 (90.04%), Postives = 240/261 (91.95%), Query Frame = 1
BLAST of ClCG03G004210 vs. NCBI nr
Match: gi|645238880|ref|XP_008225885.1| (PREDICTED: uncharacterized protein LOC103325490 [Prunus mume]) HSP 1 Score: 374.0 bits (959), Expect = 2.0e-100 Identity = 184/246 (74.80%), Postives = 203/246 (82.52%), Query Frame = 1
BLAST of ClCG03G004210 vs. NCBI nr
Match: gi|595912437|ref|XP_007214443.1| (hypothetical protein PRUPE_ppa024886mg [Prunus persica]) HSP 1 Score: 373.2 bits (957), Expect = 3.5e-100 Identity = 182/240 (75.83%), Postives = 202/240 (84.17%), Query Frame = 1
BLAST of ClCG03G004210 vs. NCBI nr
Match: gi|1009109597|ref|XP_015891012.1| (PREDICTED: uncharacterized protein LOC107425516 [Ziziphus jujuba]) HSP 1 Score: 363.6 bits (932), Expect = 2.8e-97 Identity = 180/243 (74.07%), Postives = 203/243 (83.54%), Query Frame = 1
BLAST of ClCG03G004210 vs. NCBI nr
Match: gi|658040977|ref|XP_008356101.1| (PREDICTED: uncharacterized protein LOC103419784 [Malus domestica]) HSP 1 Score: 359.8 bits (922), Expect = 4.0e-96 Identity = 174/241 (72.20%), Postives = 200/241 (82.99%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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