CsaV3_1G010140 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G010140
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	PLATZ transcription factor family protein
Location	chr1 : 6304083 .. 6306747 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTATTTAGTGAGTAATAATGAGATGAATTTATATGATAGTACAAAAGACAAAGTGTTTGAGCTTGATTTGTGATAGTAAGAACATTTTGTTTGGAGGATTGCTTGTGTGAATGTTAGGGTGGGGAAGACACAAAGAAAGAAGAAAGTGGAAATACGAAAAGGGGCAGCATAATCAAAATGGATGGAGAGGGAAGAGGGGGAGAAAGCGGGGCAATTCTGAGAATAAAAAAAAGAAGAAGAAAATTCTCGGGTTGCTAAAGTCTGCAATACAACAGAGAGAAAGTATAGTAATAATAAGCAGAACCAAAAAGAAAAAAGGAAAAAGAAAAAGAATAGGTTTATTGGTGGGCAGTATAGCACCATTAACACAACTCCCTAAGTTCCCAACCCCAATTTCCCCTCTACTTAACTTTTGCAATAAAACGACAACCTGACGGTCAAGAAAAACAAACCCCTGCTTCGGTGCTTCCCTTCCGCTCACTCATACACCATTATAACAATTTGTTTTCATTTTGTTTAGATGTATAGAAATGGCGAACTTGATGACGATGATGAACATGAACCAGTGTGGGTCTAAACCTGCATGGCTTCAAGCCCTTATGGCCGACACTTTCTTTGGAACTTGCTTGCTTCATGAGAACCGCCGCAAGTCCGAGAAGAACGTTTTTTGCTTGCATTGTTGTCTTAGTATTTGCCCTCACTGTCTTCCTTCTCACCGTTCTCATCCTCTTCTTCAGGTTTCATTTCTTTTTCTTTTCTTTTAATTTATTTATTATTTTATCTAAATATCCCCACCCCCCACCAAAAAAAAAAAAAAAAAAACTTTATCTTACTTTTGGGATTTGGTTGGTTTCCTATTCGTAGACGACTCCATTTTTATCTATCTTTCCTGCCAAACTCTTCTCACTTGTTGCTTTCACTCAATATTAACATTTTTACTACTTTATCCTATAATTCTCCTTTTTTACTAATTAAATTTAATTAATCAGGTCAGACGATATGTTTATCATGATGTAATTCGATTGGGGGATCTTGAGAAGCTTATTGACTGTTCTCATATTCAGGTATTTTCTTAAAAAAAAGTTTGCTCAATTTTGTTGGTGCTGTTAATTAAGGAGATATGTGTGATTTGAATTTGAATTTCTTTTTATAAAATTTGGCAGCCGTACACTATAAACGGAGCCAAAGTGATATTTTTGAATTACAGGCCACAATCTAGGCCATGCAAAGCAGGCTCTTCAACCAATGCTTGTTTCACTTGTGATAGAATTCTTCAAGAACCCTTCCATTTCTGCTCTCTCTCCTGCAAGGTTTTTTTCTCCCTTTAATTTAACCCCTTTCTTTTTATTTCAAAATTATCATCTATTGTGTTACCATTTTCACTTTTAATTTACCTCTAATTATTGTTTCTTGAAAAATTTTCAATTTATATAATCTATTTGAGTATATTTTTACATTATTCGACTAGTAATGTAATAGCTATTAATGAGTTAGTTAATCAGTAATCTAAAGACAAATACTAGGGTTGTGATGTACCATTGTATAAAATGTAATTTCAGCTTAATAATAATTGTCTTAATTATAAATTTGAGGAATTTTTTTGTGTATCTCATAGTAATTATTAACCAGCAATATATTTTTGCTATCTTTTTTACATCGAATATAGTAAAATTGGAAAATGATATAATATTAAATTTAGTTAATTATTTATTTAGTATGTGTGTTTTAAGAAAAAAAAAATTAAACATTTACTTTTTCAATCCTTTATTTACATTAACAATTTCCGTATTTTTATTTTATTTTATATTTGTTTTGGGTAAATATGCATTTCATTATATACGAGCATAATGTTTACGGCAGAGAAAAGAGAGAAAAAATTCTTTAATGGTATAGAGTTGATTTGAATTGACGGATGATTTAACAACGATCAGGTGGATCACATGGTGTATCAAGGGGAAGATTTATATAGTATTCTACACAGGTTCAACGAATCGGATTTCTCCTACTCTCAATTCGAAGGATTAAGAGTTGATGGACTGGAAGGAATGGAAGAAGATGGTCAAATGACACCAAATTCCGTCGTAGAGGATTCATCACAACACTTCAACAAATCCTCATCTTGTTCCAATATGAACGACTCAGCTCCCACAAATGTGTCATCAGGAACTCACATCTTCAAAAGAAAAAACAAAGGCACCGATTTTCTTCCCGCCGGAATTGTTCTATCTCTCAGCAGCCGAAGAAAAGGCGCCCCTCAAAGGGCTCCTCTCTCTTAACCCCCCCACCCCCATAATTTAGATACCATATTATTACTATTATTATTATTATTATTAACAATTAAAAAAAGTAGATTAAATAAATTATTTAAGTTCGGTTTCTTTCTTTTATTTTATAAATGATTCGGATAATTAATTGTGTTTGTGTTGTGTCGGTTTATATTTTATATAGAAGGGCATTTTCCGGTCAGGGTTGGATTTTTGGCAAGTGAATTATGCGGCGGTGGGGGCGGGTTTTCCCGATAACTTTTACCGGCCTTTTCCCGGTGGGGTTGTTTTGGAGATATTAATTTCTTATTTGTATTGTGTACCCACCAATTTTGTATTAATTCGTGTAATTTTATGGGAACTTGCACGTAAATTATATATTTTGTGCGTCTGGGTTGTT

mRNA sequence

ATGGCGAACTTGATGACGATGATGAACATGAACCAGTGTGGGTCTAAACCTGCATGGCTTCAAGCCCTTATGGCCGACACTTTCTTTGGAACTTGCTTGCTTCATGAGAACCGCCGCAAGTCCGAGAAGAACGTTTTTTGCTTGCATTGTTGTCTTAGTATTTGCCCTCACTGTCTTCCTTCTCACCGTTCTCATCCTCTTCTTCAGGTCAGACGATATGTTTATCATGATGTAATTCGATTGGGGGATCTTGAGAAGCTTATTGACTGTTCTCATATTCAGCCGTACACTATAAACGGAGCCAAAGTGATATTTTTGAATTACAGGCCACAATCTAGGCCATGCAAAGCAGGCTCTTCAACCAATGCTTGTTTCACTTGTGATAGAATTCTTCAAGAACCCTTCCATTTCTGCTCTCTCTCCTGCAAGGTGGATCACATGGTGTATCAAGGGGAAGATTTATATAGTATTCTACACAGGTTCAACGAATCGGATTTCTCCTACTCTCAATTCGAAGGATTAAGAGTTGATGGACTGGAAGGAATGGAAGAAGATGGTCAAATGACACCAAATTCCGTCGTAGAGGATTCATCACAACACTTCAACAAATCCTCATCTTGTTCCAATATGAACGACTCAGCTCCCACAAATGTGTCATCAGGAACTCACATCTTCAAAAGAAAAAACAAAGGCACCGATTTTCTTCCCGCCGGAATTGTTCTATCTCTCAGCAGCCGAAGAAAAGGCGCCCCTCAAAGGGCTCCTCTCTCTTAA

Coding sequence (CDS)

ATGGCGAACTTGATGACGATGATGAACATGAACCAGTGTGGGTCTAAACCTGCATGGCTTCAAGCCCTTATGGCCGACACTTTCTTTGGAACTTGCTTGCTTCATGAGAACCGCCGCAAGTCCGAGAAGAACGTTTTTTGCTTGCATTGTTGTCTTAGTATTTGCCCTCACTGTCTTCCTTCTCACCGTTCTCATCCTCTTCTTCAGGTCAGACGATATGTTTATCATGATGTAATTCGATTGGGGGATCTTGAGAAGCTTATTGACTGTTCTCATATTCAGCCGTACACTATAAACGGAGCCAAAGTGATATTTTTGAATTACAGGCCACAATCTAGGCCATGCAAAGCAGGCTCTTCAACCAATGCTTGTTTCACTTGTGATAGAATTCTTCAAGAACCCTTCCATTTCTGCTCTCTCTCCTGCAAGGTGGATCACATGGTGTATCAAGGGGAAGATTTATATAGTATTCTACACAGGTTCAACGAATCGGATTTCTCCTACTCTCAATTCGAAGGATTAAGAGTTGATGGACTGGAAGGAATGGAAGAAGATGGTCAAATGACACCAAATTCCGTCGTAGAGGATTCATCACAACACTTCAACAAATCCTCATCTTGTTCCAATATGAACGACTCAGCTCCCACAAATGTGTCATCAGGAACTCACATCTTCAAAAGAAAAAACAAAGGCACCGATTTTCTTCCCGCCGGAATTGTTCTATCTCTCAGCAGCCGAAGAAAAGGCGCCCCTCAAAGGGCTCCTCTCTCTTAA

Protein sequence

MANLMTMMNMNQCGSKPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLPSHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSSTNACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRVDGLEGMEEDGQMTPNSVVEDSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAPLS

Homology

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BLAST of CsaV3_1G010140 vs. NCBI nr
Match: XP_011652401.1 (PREDICTED: uncharacterized protein LOC101205397 [Cucumis sativus] >KGN64462.1 hypothetical protein Csa_1G056980 [Cucumis sativus])

HSP 1 Score: 536.6 bits (1381), Expect = 4.7e-149
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MANLMTMMNMNQCGSKPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLP 60
           MANLMTMMNMNQCGSKPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLP
Sbjct: 1   MANLMTMMNMNQCGSKPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLP 60

Query: 61  SHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSS 120
           SHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSS
Sbjct: 61  SHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSS 120

Query: 121 TNACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRVDGLE 180
           TNACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRVDGLE
Sbjct: 121 TNACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRVDGLE 180

Query: 181 GMEEDGQMTPNSVVEDSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLPAGIV 240
           GMEEDGQMTPNSVVEDSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLPAGIV
Sbjct: 181 GMEEDGQMTPNSVVEDSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLPAGIV 240

Query: 241 LSLSSRRKGAPQRAPLS 258
           LSLSSRRKGAPQRAPLS
Sbjct: 241 LSLSSRRKGAPQRAPLS 257

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BLAST of CsaV3_1G010140 vs. NCBI nr
Match: XP_023001010.1 (uncharacterized protein LOC111495276 [Cucurbita maxima])

HSP 1 Score: 463.4 bits (1191), Expect = 5.1e-127
Identity = 222/255 (87.06%), Postives = 237/255 (92.94%), Query Frame = 0


Query: 7   MMNMNQCG----SKPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLPSH 66
           MM +NQCG    +KPAWLQALMA+TFFG CLLHENRRK EKNVFCLHCCLSICPHCLPSH
Sbjct: 1   MMMINQCGATMAAKPAWLQALMAETFFGACLLHENRRKCEKNVFCLHCCLSICPHCLPSH 60

Query: 67  RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSSTN 126
           RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCK G+STN
Sbjct: 61  RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTN 120

Query: 127 ACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRVDGLEGM 186
            CFTCDRILQEPFHFCSLSCKVDHMVYQGEDL  ILHRF+ESDFSY+QFEGLR +GL+G+
Sbjct: 121 VCFTCDRILQEPFHFCSLSCKVDHMVYQGEDLCGILHRFDESDFSYTQFEGLRGEGLKGL 180

Query: 187 EEDGQMTPNSVVEDSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLPAGIVLS 246
           +EDGQ+TPNS+VEDSSQ FN+ SSCSN+ND  PTNVSSGTHIFKRKNK  DFLPAGIVLS
Sbjct: 181 DEDGQITPNSMVEDSSQ-FNEGSSCSNINDLNPTNVSSGTHIFKRKNKSADFLPAGIVLS 240

Query: 247 LSSRRKGAPQRAPLS 258
           LSSRRKGAPQR+PLS
Sbjct: 241 LSSRRKGAPQRSPLS 254

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BLAST of CsaV3_1G010140 vs. NCBI nr
Match: XP_022137485.1 (uncharacterized protein LOC111008916 [Momordica charantia])

HSP 1 Score: 463.0 bits (1190), Expect = 6.7e-127
Identity = 230/264 (87.12%), Postives = 241/264 (91.29%), Query Frame = 0


Query: 4   LMTMMNMNQCG-------SKPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICP 63
           +  MM +N CG        KPAWLQALMA+TFFGTCLLHENRRKSEKNVFCL+CCLSICP
Sbjct: 3   MANMMMINHCGGGGGAMAGKPAWLQALMAETFFGTCLLHENRRKSEKNVFCLNCCLSICP 62

Query: 64  HCLPSHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCK 123
           HCLPSHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCK
Sbjct: 63  HCLPSHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCK 122

Query: 124 AGSSTNACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRV 183
            GSS NACFTCDRILQEPFHFCSLSCKVDHMVYQGEDL  ILHRF+ESDFSYSQFEGLRV
Sbjct: 123 QGSS-NACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLCGILHRFDESDFSYSQFEGLRV 182

Query: 184 DGLEGMEEDGQMTPNSVVEDSSQHFNKSSSCSNMNDSAPTN---VSSGTHIFKRKNKGTD 243
           DGLEG+++DGQMTPNS VED SQ FNK+SSCSNM++ APTN   VSSGTHIFKRKNKGTD
Sbjct: 183 DGLEGIDDDGQMTPNSGVEDPSQ-FNKASSCSNMSELAPTNNSVVSSGTHIFKRKNKGTD 242

Query: 244 FLPAGIVLSLSSRRKGAPQRAPLS 258
           FLPAGIVLSLSSRRKGAPQRAPLS
Sbjct: 243 FLPAGIVLSLSSRRKGAPQRAPLS 264

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BLAST of CsaV3_1G010140 vs. NCBI nr
Match: XP_022924113.1 (uncharacterized protein LOC111431647 [Cucurbita moschata])

HSP 1 Score: 462.6 bits (1189), Expect = 8.7e-127
Identity = 222/255 (87.06%), Postives = 237/255 (92.94%), Query Frame = 0


Query: 7   MMNMNQCG----SKPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLPSH 66
           MM +NQCG    +KPAWLQALMA+TFFG CLLHENRRK EKNVFCLHCCLSICPHCLPSH
Sbjct: 1   MMMINQCGATMAAKPAWLQALMAETFFGACLLHENRRKCEKNVFCLHCCLSICPHCLPSH 60

Query: 67  RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSSTN 126
           RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCK G+STN
Sbjct: 61  RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTN 120

Query: 127 ACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRVDGLEGM 186
            CFTCDRILQEPFHFCSLSCKVDHMVYQGEDL  ILHRF+ESDFSY+QFEGLR +GL+G+
Sbjct: 121 VCFTCDRILQEPFHFCSLSCKVDHMVYQGEDLCGILHRFDESDFSYAQFEGLRGEGLKGL 180

Query: 187 EEDGQMTPNSVVEDSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLPAGIVLS 246
           +EDGQ+TPNS+VEDSSQ FN+ SSCSN+ND  PTNVSSGTHIFKRKNK  DFLPAGIVLS
Sbjct: 181 DEDGQITPNSMVEDSSQ-FNEGSSCSNINDLNPTNVSSGTHIFKRKNKTADFLPAGIVLS 240

Query: 247 LSSRRKGAPQRAPLS 258
           LSSRRKGAPQR+PLS
Sbjct: 241 LSSRRKGAPQRSPLS 254

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BLAST of CsaV3_1G010140 vs. NCBI nr
Match: XP_023520179.1 (uncharacterized protein LOC111783481 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 459.1 bits (1180), Expect = 9.6e-126
Identity = 220/255 (86.27%), Postives = 236/255 (92.55%), Query Frame = 0


Query: 7   MMNMNQCG----SKPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLPSH 66
           MM +NQCG    +KPAWLQALMA+TFFG CLLHENRRK EKNVFCLHCCLSICPHCLPSH
Sbjct: 1   MMMINQCGATMAAKPAWLQALMAETFFGACLLHENRRKCEKNVFCLHCCLSICPHCLPSH 60

Query: 67  RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSSTN 126
           RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCK G+STN
Sbjct: 61  RSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKQGASTN 120

Query: 127 ACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRVDGLEGM 186
            CFTCDRILQEPFHFCSLSCKVDHMVY+GEDL  ILHRF+ESDFSY+QFEGLR +GL+G+
Sbjct: 121 VCFTCDRILQEPFHFCSLSCKVDHMVYRGEDLCGILHRFDESDFSYAQFEGLRGEGLKGL 180

Query: 187 EEDGQMTPNSVVEDSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLPAGIVLS 246
           +EDGQ+TPNS+V+DSSQ FN+ SSCSN ND  PTNVSSGTHIFKRKNK  DFLPAGIVLS
Sbjct: 181 DEDGQITPNSMVDDSSQ-FNEGSSCSNTNDLNPTNVSSGTHIFKRKNKTADFLPAGIVLS 240

Query: 247 LSSRRKGAPQRAPLS 258
           LSSRRKGAPQR+PLS
Sbjct: 241 LSSRRKGAPQRSPLS 254

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BLAST of CsaV3_1G010140 vs. TAIR10
Match: AT1G31040.1 (PLATZ transcription factor family protein)

HSP 1 Score: 283.5 bits (724), Expect = 1.3e-76
Identity = 146/243 (60.08%), Postives = 170/243 (69.96%), Query Frame = 0


Query: 15  SKPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLPSHRSHPLLQVRRYV 74
           +KPAWL+ LMA+TFF +C +HE RRKSEKNVFCL CCLS+CPHCLPSHRSHPLLQVRRYV
Sbjct: 17  TKPAWLEGLMAETFFSSCGIHETRRKSEKNVFCLLCCLSVCPHCLPSHRSHPLLQVRRYV 76

Query: 75  YHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSSTNACFTCDRILQEP 134
           YHDV+RL DLEKLIDCS++QPYTINGAKVIFLN R QSR   A  S+N CFTCDRILQEP
Sbjct: 77  YHDVVRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQSR---AKVSSNVCFTCDRILQEP 136

Query: 135 FHFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRVDGLEGMEEDGQMTPNSVV 194
           FHFCSLSCKVD++ YQG+DL SIL+R +ESDF+   FEGLR+DG +      Q+   S +
Sbjct: 137 FHFCSLSCKVDYLSYQGDDLSSILYRIDESDFT---FEGLRMDGHD------QLGEISTM 196

Query: 195 EDSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRA 254
           ED                                N    +LP  ++ SL +RRKGAP RA
Sbjct: 197 EDGEDILXXXXXXXXXXXXXXXXXXXXXXXXXXSN----YLPGMVLSSLGNRRKGAPHRA 243

Query: 255 PLS 258
           P S
Sbjct: 257 PFS 243

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BLAST of CsaV3_1G010140 vs. TAIR10
Match: AT3G60670.1 (PLATZ transcription factor family protein)

HSP 1 Score: 188.3 bits (477), Expect = 5.7e-48
Identity = 100/245 (40.82%), Postives = 138/245 (56.33%), Query Frame = 0


Query: 12  QCGSKPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLPSHRSHPLLQVR 71
           + G  PAWL+ L+ D FF  CL HE+ +K+EKN+ C+ CCL+ICPHCL SH SH LLQ+R
Sbjct: 2   ESGEFPAWLEVLLKDKFFNACLDHEDDKKNEKNILCIDCCLTICPHCLSSHTSHRLLQIR 61

Query: 72  RYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSSTNACFTCDRIL 131
           RYVY DV+R+ D  KL+DCS IQPYT N +KV+F+N RPQSR  +   S N C TCDR L
Sbjct: 62  RYVYRDVLRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFR--GSGNICITCDRSL 121

Query: 132 QEPFHFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRVDGLEGMEEDGQMTPN 191
           Q P+ FC LSCK+  ++ +   L   L   N  D +           LE    +   + +
Sbjct: 122 QSPYLFCCLSCKISDVIMRQRGLSGFLRVCNVLDLTDEVTTTTPSSTLEPTGSNRTSSES 181

Query: 192 SVVEDSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAP 251
           S  E     + ++ +C+   +      SS +   +R  +          ++  +RRK  P
Sbjct: 182 SGNEGEDMFWCQALACTATTEIVRKKRSSLSTTCRRVTEVVSTTNTEAPVNFLNRRKNPP 241

Query: 252 QRAPL 257
           QRAPL
Sbjct: 242 QRAPL 244

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BLAST of CsaV3_1G010140 vs. TAIR10
Match: AT2G12646.1 (PLATZ transcription factor family protein)

HSP 1 Score: 186.4 bits (472), Expect = 2.2e-47
Identity = 85/143 (59.44%), Postives = 104/143 (72.73%), Query Frame = 0


Query: 16  KPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLPSHRSHPLLQVRRYVY 75
           KPAWL AL A+ FF  C  HE  +K+E+NV CL CC S+CPHC+PSHR H LLQVRRYVY
Sbjct: 5   KPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYVY 64

Query: 76  HDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSSTNACFTCDRILQEPF 135
           HDV+RL DL+KLIDCS++Q YTIN AKV+F+  RPQ+R  K     N C +CDR LQEP+
Sbjct: 65  HDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAG--NYCTSCDRSLQEPY 124

Query: 136 HFCSLSCKVDHMVYQGEDLYSIL 159
             CSL CKVD ++ +  D+   L
Sbjct: 125 IHCSLGCKVDFVMKRYRDITPFL 145

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BLAST of CsaV3_1G010140 vs. TAIR10
Match: AT2G01818.1 (PLATZ transcription factor family protein)

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30
Identity = 64/138 (46.38%), Postives = 85/138 (61.59%), Query Frame = 0


Query: 15  SKPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHC----LPSHRSHPLLQV 74
           S+  W++ L+   FFG C+ H+  RK+EKNVFC+ C + IC HC      SH  H  LQ+
Sbjct: 9   SEEVWIETLLNSEFFGICMNHKYLRKNEKNVFCIDCNVEICRHCCNTVTDSHFLHRRLQI 68

Query: 75  RRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQ---SRPCKAGSSTNACFTC 134
            +YVY DVIRL +++   DCS IQ Y ING K I LN RPQ   +RP     +  +C TC
Sbjct: 69  CKYVYQDVIRLLEIQNYFDCSEIQTYKINGEKAIHLNSRPQAKDARPSTKAKNGASCVTC 128

Query: 135 DRILQE-PFHFCSLSCKV 145
            R +Q+ P  FCS+SCK+
Sbjct: 129 KRYIQDHPNLFCSISCKI 146

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BLAST of CsaV3_1G010140 vs. TAIR10
Match: AT1G32700.1 (PLATZ transcription factor family protein)

HSP 1 Score: 130.2 bits (326), Expect = 1.9e-30
Identity = 65/154 (42.21%), Postives = 92/154 (59.74%), Query Frame = 0


Query: 17  PAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLS-ICPHCLPSHRSHPLLQVRRYVY 76
           P WL+ L+ + FF  C LH +  KSE N++CL C    +C  CL  H+ H  +Q+RR  Y
Sbjct: 12  PHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDHHAIQIRRSSY 71

Query: 77  HDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSSTNACFTCDRILQEPF 136
           HDVIR+ +++K +D + +Q Y IN AKV+FLN RPQ RP K     N C  C R L + F
Sbjct: 72  HDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGK--GVINTCEVCYRSLVDSF 131

Query: 137 HFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYS 170
            FCSL CK+  +  +    ++  +  ++SD SYS
Sbjct: 132 RFCSLGCKISGISKKKRKEWT--NNLSDSDDSYS 161

[Close]

BLAST of CsaV3_1G010140 vs. TrEMBL
Match: tr|A0A0A0LUK6|A0A0A0LUK6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G056980 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 3.1e-149
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MANLMTMMNMNQCGSKPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLP 60
           MANLMTMMNMNQCGSKPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLP
Sbjct: 1   MANLMTMMNMNQCGSKPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLP 60

Query: 61  SHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSS 120
           SHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSS
Sbjct: 61  SHRSHPLLQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSS 120

Query: 121 TNACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRVDGLE 180
           TNACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRVDGLE
Sbjct: 121 TNACFTCDRILQEPFHFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRVDGLE 180

Query: 181 GMEEDGQMTPNSVVEDSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLPAGIV 240
           GMEEDGQMTPNSVVEDSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLPAGIV
Sbjct: 181 GMEEDGQMTPNSVVEDSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLPAGIV 240

Query: 241 LSLSSRRKGAPQRAPLS 258
           LSLSSRRKGAPQRAPLS
Sbjct: 241 LSLSSRRKGAPQRAPLS 257

[Close]

BLAST of CsaV3_1G010140 vs. TrEMBL
Match: tr|M5WPE5|M5WPE5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa024886mg PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 5.6e-98
Identity = 180/242 (74.38%), Postives = 204/242 (84.30%), Query Frame = 0


Query: 16  KPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLPSHRSHPLLQVRRYVY 75
           KPAWL+ LMA+TFFG C +HENRRK+EKN+FCLHCCLSICPHCL SHRSHPLLQVRRYVY
Sbjct: 2   KPAWLEGLMAETFFGGCGVHENRRKNEKNIFCLHCCLSICPHCLHSHRSHPLLQVRRYVY 61

Query: 76  HDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSSTNACFTCDRILQEPF 135
           HDV+RLGDLEKLIDCS+IQPYTINGAKVIFLN RPQSR CK GS+ N C TCDRILQEPF
Sbjct: 62  HDVVRLGDLEKLIDCSYIQPYTINGAKVIFLNQRPQSRTCKQGSA-NICLTCDRILQEPF 121

Query: 136 HFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRVDGLEGMEEDGQMTPNSVVE 195
           HFCSLSCKVDH+VYQGEDL  IL+RF+ESDF+ SQFEGLR+DG E +++DG M P+S++E
Sbjct: 122 HFCSLSCKVDHLVYQGEDLSGILYRFDESDFTISQFEGLRMDGSEVIDDDGHMIPSSIIE 181

Query: 196 DSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAP 255
           D  Q+  ++SSCSN   S          I K+K KG+ FLP GIVLSLSSRRKGAPQRAP
Sbjct: 182 DPLQY--RASSCSNEATSDSVMSQEPEVIKKKKKKGSGFLP-GIVLSLSSRRKGAPQRAP 239

Query: 256 LS 258
           LS
Sbjct: 242 LS 239

[Close]

BLAST of CsaV3_1G010140 vs. TrEMBL
Match: tr|A0A251PJ66|A0A251PJ66_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G115600 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 5.6e-98
Identity = 180/242 (74.38%), Postives = 204/242 (84.30%), Query Frame = 0


Query: 16  KPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLPSHRSHPLLQVRRYVY 75
           KPAWL+ LMA+TFFG C +HENRRK+EKN+FCLHCCLSICPHCL SHRSHPLLQVRRYVY
Sbjct: 33  KPAWLEGLMAETFFGGCGVHENRRKNEKNIFCLHCCLSICPHCLHSHRSHPLLQVRRYVY 92

Query: 76  HDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSSTNACFTCDRILQEPF 135
           HDV+RLGDLEKLIDCS+IQPYTINGAKVIFLN RPQSR CK GS+ N C TCDRILQEPF
Sbjct: 93  HDVVRLGDLEKLIDCSYIQPYTINGAKVIFLNQRPQSRTCKQGSA-NICLTCDRILQEPF 152

Query: 136 HFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRVDGLEGMEEDGQMTPNSVVE 195
           HFCSLSCKVDH+VYQGEDL  IL+RF+ESDF+ SQFEGLR+DG E +++DG M P+S++E
Sbjct: 153 HFCSLSCKVDHLVYQGEDLSGILYRFDESDFTISQFEGLRMDGSEVIDDDGHMIPSSIIE 212

Query: 196 DSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAP 255
           D  Q+  ++SSCSN   S          I K+K KG+ FLP GIVLSLSSRRKGAPQRAP
Sbjct: 213 DPLQY--RASSCSNEATSDSVMSQEPEVIKKKKKKGSGFLP-GIVLSLSSRRKGAPQRAP 270

Query: 256 LS 258
           LS
Sbjct: 273 LS 270

[Close]

BLAST of CsaV3_1G010140 vs. TrEMBL
Match: tr|A0A2I4GQ76|A0A2I4GQ76_9ROSI (uncharacterized protein LOC109002524 OS=Juglans regia OX=51240 GN=LOC109009870 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 6.9e-96
Identity = 178/250 (71.20%), Postives = 208/250 (83.20%), Query Frame = 0


Query: 8   MNMNQCGSKPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLPSHRSHPL 67
           + +N    KPAWL+ LMA+TFFG C +HENRRK+EKNVFCLHCC+SICPHCLPSHRSHPL
Sbjct: 12  VGVNNMSMKPAWLEGLMAETFFGGCGVHENRRKNEKNVFCLHCCVSICPHCLPSHRSHPL 71

Query: 68  LQVRRYVYHDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSSTNACFTC 127
           LQVRRYVYHDV+RLGDLEKLIDCS+IQPYTIN AKVIFLN RPQSR CK   S N C TC
Sbjct: 72  LQVRRYVYHDVVRLGDLEKLIDCSYIQPYTINSAKVIFLNQRPQSRSCK--GSANICLTC 131

Query: 128 DRILQEPFHFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRVDGLEGMEEDGQ 187
           DRILQEPFHFCSLSCKVDH VYQGEDL SIL+RF+ESDF+ SQFEGL++DG E +++DGQ
Sbjct: 132 DRILQEPFHFCSLSCKVDHKVYQGEDLSSILYRFDESDFAISQFEGLQMDGSEIIDDDGQ 191

Query: 188 MTPNSVVEDSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLPAGIVLSLSSRR 247
           +T +S++E+  Q+  +SSSCSN   ++ + +S    + K+K KG   LP GIVLSLSSRR
Sbjct: 192 ITTSSILEEPLQY--RSSSCSN-EATSNSVISREPEMVKKKKKGHGLLP-GIVLSLSSRR 251

Query: 248 KGAPQRAPLS 258
           KGAPQRAPLS
Sbjct: 252 KGAPQRAPLS 255

[Close]

BLAST of CsaV3_1G010140 vs. TrEMBL
Match: tr|A0A1R3HXK1|A0A1R3HXK1_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_16391 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.0e-95
Identity = 179/242 (73.97%), Postives = 204/242 (84.30%), Query Frame = 0


Query: 16  KPAWLQALMADTFFGTCLLHENRRKSEKNVFCLHCCLSICPHCLPSHRSHPLLQVRRYVY 75
           KPAWL+ LM +TFFG C  HE+RRK+EKNVFCL CCLSICPHCLPSHRSHPLLQVRRYVY
Sbjct: 5   KPAWLEGLMGETFFGVCGAHESRRKNEKNVFCLLCCLSICPHCLPSHRSHPLLQVRRYVY 64

Query: 76  HDVIRLGDLEKLIDCSHIQPYTINGAKVIFLNYRPQSRPCKAGSSTNACFTCDRILQEPF 135
           HDV+RLGDLEKLI+CS+IQPYTINGAKVIFLN RPQSR CK   S N CFTCDRILQEPF
Sbjct: 65  HDVVRLGDLEKLIECSYIQPYTINGAKVIFLNQRPQSRSCK--GSANICFTCDRILQEPF 124

Query: 136 HFCSLSCKVDHMVYQGEDLYSILHRFNESDFSYSQFEGLRVDGLEGMEEDGQMTPNSVVE 195
           HFCSLSCKVDHMV QGEDL +ILHR +ESDF++SQFEGLRVDG E ME+D Q+TPNS++E
Sbjct: 125 HFCSLSCKVDHMVDQGEDLSTILHRIDESDFAFSQFEGLRVDGPESMEDD-QITPNSILE 184

Query: 196 DSSQHFNKSSSCSNMNDSAPTNVSSGTHIFKRKNKGTDFLPAGIVLSLSSRRKGAPQRAP 255
           D  Q+  K SSCSN +    + VSS   + ++K KG+ FL  GIVLSL+++RKGAPQRAP
Sbjct: 185 DPLQY--KGSSCSNGSTIGNSQVSS--DVVRKKKKGSGFL-GGIVLSLNNKRKGAPQRAP 238

Query: 256 LS 258
           LS
Sbjct: 245 LS 238

The following BLAST results are available for this feature:

BLAST of CsaV3_1G010140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652401.1	4.7e-149	100.00	PREDICTED: uncharacterized protein LOC101205397 [Cucumis sativus] >KGN64462.1 hy...	[more]
XP_023001010.1	5.1e-127	87.06	uncharacterized protein LOC111495276 [Cucurbita maxima]	[more]
XP_022137485.1	6.7e-127	87.12	uncharacterized protein LOC111008916 [Momordica charantia]	[more]
XP_022924113.1	8.7e-127	87.06	uncharacterized protein LOC111431647 [Cucurbita moschata]	[more]
XP_023520179.1	9.6e-126	86.27	uncharacterized protein LOC111783481 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_1G010140 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31040.1	1.3e-76	60.08	PLATZ transcription factor family protein	[more]
AT3G60670.1	5.7e-48	40.82	PLATZ transcription factor family protein	[more]
AT2G12646.1	2.2e-47	59.44	PLATZ transcription factor family protein	[more]
AT2G01818.1	1.1e-30	46.38	PLATZ transcription factor family protein	[more]
AT1G32700.1	1.9e-30	42.21	PLATZ transcription factor family protein	[more]

BLAST of CsaV3_1G010140 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G010140 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LUK6\|A0A0A0LUK6_CUCSA	3.1e-149	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G056980 PE=4 SV=1	[more]
tr\|M5WPE5\|M5WPE5_PRUPE	5.6e-98	74.38	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa024886mg PE=4 SV=1	[more]
tr\|A0A251PJ66\|A0A251PJ66_PRUPE	5.6e-98	74.38	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G115600 PE=4 SV=1	[more]
tr\|A0A2I4GQ76\|A0A2I4GQ76_9ROSI	6.9e-96	71.20	uncharacterized protein LOC109002524 OS=Juglans regia OX=51240 GN=LOC109009870 P...	[more]
tr\|A0A1R3HXK1\|A0A1R3HXK1_COCAP	2.0e-95	73.97	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_16391 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006734	DUF597

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G010140.1	CsaV3_1G010140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	Protein of unknown function DUF597	PFAM	PF04640	PLATZ	coord: 71..144 e-value: 3.2E-27 score: 94.9
None	No IPR available	PANTHER	PTHR31065:SF32	SUBFAMILY NOT NAMED	coord: 15..257
None	No IPR available	PANTHER	PTHR31065	FAMILY NOT NAMED	coord: 15..257

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G010140	CSPI01G10070	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G010140	Cucsa.134530	Cucumber (Gy14) v1	cgycucB196
CsaV3_1G010140	CmaCh13G008460	Cucurbita maxima (Rimu)	cmacucB0235
CsaV3_1G010140	CmaCh18G002840	Cucurbita maxima (Rimu)	cmacucB0474
CsaV3_1G010140	Cp4.1LG20g02750	Cucurbita pepo (Zucchini)	cpecucB0634
CsaV3_1G010140	Cp4.1LG09g09300	Cucurbita pepo (Zucchini)	cpecucB0031
CsaV3_1G010140	CsGy1G010100	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G010140	Carg06828	Silver-seed gourd	carcucB0529
CsaV3_1G010140	Carg07639	Silver-seed gourd	carcucB1046
CsaV3_1G010140	Cla019334	Watermelon (97103) v1	cucwmB013
CsaV3_1G010140	MELO3C002404	Melon (DHL92) v3.5.1	cucmeB024
CsaV3_1G010140	ClCG03G004210	Watermelon (Charleston Gray)	cucwcgB038
CsaV3_1G010140	Lsi02G005440	Bottle gourd (USVL1VR-Ls)	cuclsiB022
CsaV3_1G010140	MELO3C002404.2	Melon (DHL92) v3.6.1	cucmedB022
CsaV3_1G010140	Cla97C03G055370	Watermelon (97103) v2	cucwmbB030
CsaV3_1G010140	BhiUN316G58	Wax gourd	cucwgoB029

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G010140	Cucurbita moschata (Rifu)	cmocucB0222
CsaV3_1G010140	Cucurbita moschata (Rifu)	cmocucB0457