CU092635 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU092635
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPLATZ transcription factor family protein
LocationChr1 : 6272164 .. 6272663 (-)
Sequence length250
The following sequences are available for this feature:

transcribed_cluster sequence

TTTTAGATGTATAGAAATGGCGAACTTGATGACGATGATGAACATGAACCAGTGTGGGTCTAAACCTGCATGGCTTCAAGCCCTTATGGCCGACACTTTCTTTGGAACTTGCTTGCTTCATGAGAACCGACCGACAAGTCCGAGAAGAACGTTTTTTGCTTGCATTGTTGTCTTAGTATTTGCCCTCACTGTCTTCCTTCTCACCGTTCTCATCCTCTTCTTCAGGTCAAGACGATATGTTTATCATGAT
BLAST of CU092635 vs. TrEMBL
Match: A0A0A0LUK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G056980 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 7.9e-16
Identity = 47/78 (60.26%), Postives = 49/78 (62.82%), Query Frame = 2

Query: 17  MANLMTMMNMNQCGSKPAWLQALMADTFFGTCLLHENRPTSPRRTFFACXXXXXXXXXXX 76
           MANLMTMMNMNQCGSKPAWLQALMADTFFGTCLLHENR  S  +  F             
Sbjct: 1   MANLMTMMNMNQCGSKPAWLQALMADTFFGTCLLHENRRKS-EKNVFCLHCCLSICPHCL 60

Query: 77  XXXXXXXXXRSRRYVYHD 136
                    + RRYVYHD
Sbjct: 61  PSHRSHPLLQVRRYVYHD 77

Query: 137 196
           
Sbjct: 121 77

Query: 197 251
           
Sbjct: 181 77

BLAST of CU092635 vs. TrEMBL
Match: A0A0B2SU02_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_026401 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 5.9e-11
Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = 1

Query: 19  GELDDDDEHEPVWV*TCMASSPYGRHFLWNLLAS*EPTDKSEKNVFCLHCCLSICPHCLP 78
           G+++ +   +P W+   MA + +G   +       +   K+EKNVFCLHCCLSICPHCL 
Sbjct: 16  GDMNMNMNEKPAWLERLMAETFFGACGVH------QDRRKNEKNVFCLHCCLSICPHCLS 75

Query: 79  SHRSHPLLQVK 138
           SHRSHPLLQV+
Sbjct: 76  SHRSHPLLQVR 80

Query: 139 198
           
Sbjct: 136 80

Query: 199 232
           
Sbjct: 196 80

BLAST of CU092635 vs. TrEMBL
Match: I1MGV8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G158600 PE=4 SV=2)

HSP 1 Score: 74.7 bits (182), Expect = 5.9e-11
Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = 1

Query: 19  GELDDDDEHEPVWV*TCMASSPYGRHFLWNLLAS*EPTDKSEKNVFCLHCCLSICPHCLP 78
           G+++ +   +P W+   MA + +G   +       +   K+EKNVFCLHCCLSICPHCL 
Sbjct: 21  GDMNMNMNEKPAWLERLMAETFFGACGVH------QDRRKNEKNVFCLHCCLSICPHCLS 80

Query: 79  SHRSHPLLQVK 138
           SHRSHPLLQV+
Sbjct: 81  SHRSHPLLQVR 85

Query: 139 198
           
Sbjct: 141 85

Query: 199 232
           
Sbjct: 201 85

BLAST of CU092635 vs. TrEMBL
Match: V7AZ47_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G241300g PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 5.9e-11
Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 1

Query: 34  DDEHEPVWV*TCMASSPYGRHFLWNLLAS*EPTDKSEKNVFCLHCCLSICPHCLPSHRSH 93
           D   +P W+   MA + +G   +       E   K+EKNVFCLHCCLSICPHCL SHRSH
Sbjct: 19  DMNEKPAWLERLMAETFFGACGVH------EDRRKNEKNVFCLHCCLSICPHCLSSHRSH 78

Query: 94  PLLQVK 153
           PLLQV+
Sbjct: 79  PLLQVR 78

Query: 154 213
           
Sbjct: 139 78

Query: 214 232
           
Sbjct: 199 78

BLAST of CU092635 vs. TrEMBL
Match: B9GYA0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s07310g PE=4 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 7.7e-11
Identity = 40/77 (51.95%), Postives = 47/77 (61.04%), Query Frame = 1

Query: 28  DDDDEH---------EPVWV*TCMASSPYGRHFLWNLLAS*EPTDKSEKNVFCLHCCLSI 87
           DDDDE          +P W+   MA + +G   +       E   K+EKNVFCL CCLSI
Sbjct: 29  DDDDEMMMMMSSKSMKPAWLEGLMAETFFGGCGVH------ESRRKNEKNVFCLLCCLSI 88

Query: 88  CPHCLPSHRSHPLLQVK 147
           CPHCLPSHRSHPLLQV+
Sbjct: 89  CPHCLPSHRSHPLLQVR 99

Query: 148 207
           
Sbjct: 149 99

Query: 208 232
           
Sbjct: 209 99

BLAST of CU092635 vs. NCBI nr
Match: gi|778658266|ref|XP_011652401.1| (PREDICTED: uncharacterized protein LOC101205397 [Cucumis sativus])

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-15
Identity = 47/78 (60.26%), Postives = 49/78 (62.82%), Query Frame = 2

Query: 17  MANLMTMMNMNQCGSKPAWLQALMADTFFGTCLLHENRPTSPRRTFFACXXXXXXXXXXX 76
           MANLMTMMNMNQCGSKPAWLQALMADTFFGTCLLHENR  S  +  F             
Sbjct: 1   MANLMTMMNMNQCGSKPAWLQALMADTFFGTCLLHENRRKS-EKNVFCLHCCLSICPHCL 60

Query: 77  XXXXXXXXXRSRRYVYHD 136
                    + RRYVYHD
Sbjct: 61  PSHRSHPLLQVRRYVYHD 77

Query: 137 196
           
Sbjct: 121 77

Query: 197 251
           
Sbjct: 181 77

BLAST of CU092635 vs. NCBI nr
Match: gi|922528093|ref|XP_013596776.1| (PREDICTED: uncharacterized protein LOC106304939 [Brassica oleracea var. oleracea])

HSP 1 Score: 79.7 bits (195), Expect = 2.6e-12
Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 1

Query: 7   MYRNGELDDDDEHEPVWV*TCMASSP------YGRHFLWNLLAS*EPTDKSEKNVFCLHC 66
           M R G+ ++++E E + +     + P       G  F ++     E   KSEKNVFCL C
Sbjct: 1   MVREGQDEEEEEEEEMMMMVAATTKPAWLKGLIGETF-FSSCGIHESRRKSEKNVFCLLC 60

Query: 67  CLSICPHCLPSHRSHPLLQVK 126
           CLS+CPHCLPSHRSHPLLQV+
Sbjct: 61  CLSVCPHCLPSHRSHPLLQVR 80

Query: 127 186
           
Sbjct: 121 80

Query: 187 232
           
Sbjct: 181 80

BLAST of CU092635 vs. NCBI nr
Match: gi|356558252|ref|XP_003547421.1| (PREDICTED: uncharacterized protein LOC100806558 [Glycine max])

HSP 1 Score: 78.6 bits (192), Expect = 5.8e-12
Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = 1

Query: 19  GELDDDDEHEPVWV*TCMASSPYGRHFLWNLLAS*EPTDKSEKNVFCLHCCLSICPHCLP 78
           G+++ +   +P W+   MA + +G   +       +   K+EKNVFCLHCCLSICPHCL 
Sbjct: 21  GDMNMNMNEKPAWLERLMAETFFGACGVH------QDRRKNEKNVFCLHCCLSICPHCLS 80

Query: 79  SHRSHPLLQVK 138
           SHRSHPLLQV+
Sbjct: 81  SHRSHPLLQVR 85

Query: 139 198
           
Sbjct: 141 85

Query: 199 232
           
Sbjct: 201 85

BLAST of CU092635 vs. NCBI nr
Match: gi|734435397|gb|KHN47712.1| (hypothetical protein glysoja_026401 [Glycine soja])

HSP 1 Score: 78.6 bits (192), Expect = 5.8e-12
Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = 1

Query: 19  GELDDDDEHEPVWV*TCMASSPYGRHFLWNLLAS*EPTDKSEKNVFCLHCCLSICPHCLP 78
           G+++ +   +P W+   MA + +G   +       +   K+EKNVFCLHCCLSICPHCL 
Sbjct: 16  GDMNMNMNEKPAWLERLMAETFFGACGVH------QDRRKNEKNVFCLHCCLSICPHCLS 75

Query: 79  SHRSHPLLQVK 138
           SHRSHPLLQV+
Sbjct: 76  SHRSHPLLQVR 80

Query: 139 198
           
Sbjct: 136 80

Query: 199 232
           
Sbjct: 196 80

BLAST of CU092635 vs. NCBI nr
Match: gi|743864204|ref|XP_011031859.1| (PREDICTED: uncharacterized protein LOC105130858 [Populus euphratica])

HSP 1 Score: 78.2 bits (191), Expect = 7.6e-12
Identity = 40/76 (52.63%), Postives = 47/76 (61.84%), Query Frame = 1

Query: 28  DDDDE--------HEPVWV*TCMASSPYGRHFLWNLLAS*EPTDKSEKNVFCLHCCLSIC 87
           DDDDE         +P W+   MA + +G   +       E   K+EKNVFCL CCLSIC
Sbjct: 29  DDDDEMMMMMSSKSKPAWLEGLMAETFFGGCGVH------ENRRKNEKNVFCLLCCLSIC 88

Query: 88  PHCLPSHRSHPLLQVK 147
           PHCLPSHRSHPLLQV+
Sbjct: 89  PHCLPSHRSHPLLQVR 98

Query: 148 207
           
Sbjct: 149 98

Query: 208 232
           
Sbjct: 209 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LUK6_CUCSA7.9e-1660.26Uncharacterized protein OS=Cucumis sativus GN=Csa_1G056980 PE=4 SV=1[more]
A0A0B2SU02_GLYSO5.9e-1149.30Uncharacterized protein OS=Glycine soja GN=glysoja_026401 PE=4 SV=1[more]
I1MGV8_SOYBN5.9e-1149.30Uncharacterized protein OS=Glycine max GN=GLYMA_15G158600 PE=4 SV=2[more]
V7AZ47_PHAVU5.9e-1154.55Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G241300g PE=4 SV=1[more]
B9GYA0_POPTR7.7e-1151.95Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s07310g PE=4 SV=2[more]
Match NameE-valueIdentityDescription
gi|778658266|ref|XP_011652401.1|1.1e-1560.26PREDICTED: uncharacterized protein LOC101205397 [Cucumis sativus][more]
gi|922528093|ref|XP_013596776.1|2.6e-1246.91PREDICTED: uncharacterized protein LOC106304939 [Brassica oleracea var. oleracea... [more]
gi|356558252|ref|XP_003547421.1|5.8e-1249.30PREDICTED: uncharacterized protein LOC100806558 [Glycine max][more]
gi|734435397|gb|KHN47712.1|5.8e-1249.30hypothetical protein glysoja_026401 [Glycine soja][more]
gi|743864204|ref|XP_011031859.1|7.6e-1252.63PREDICTED: uncharacterized protein LOC105130858 [Populus euphratica][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G056980Csa1G056980gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0037725H0037725EST
H0059732H0059732EST