MELO3C019305 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGGGCCACTTCATACATTTTTAGAAATGAAAATGAAAATGAAAATGAGCTAGTTTTTACTATATTTTTTTTATTCGGCCTCTAAAGGCCAATTGTAAAATCTGTGTCCTCAATCTATGAGTGTATTTGTAATATCAAAAACTCGATCACAAGCAATCACCAATGCAATGATGAGCAACACGAACACCTTGCTACTGCTTGCTAGAAAAGCACTAACCAATATCCAAACTCCAATTCTTACCTTTCGTTGCTTCTGTTCTCAATCCACCTCCGCTCTCTCATCTTCTCCTTCTGCACCAAGCAATAAGCTCTTCGTAGCAGGTTCACTTCTCTTCCTCCATCCACTTACACAGATGCACCACCCACTTGATTCAGATGCCTTTTACATTCATGAATTTGATCTTGTTTCTTCCTTTTCCTTCCAGGGTTGTCTTGGTCCATGGATGAGAGATCATTGAAAGATGCGTTTTCTTCCTTTGGGGAGGTTACTGAAGGTAATCGTGCATGTTGAGCTTAACCCTTTGATTTACCAGTTGTAGTCTACATGTTCGACGAAATGTCTAGTTGATTTCAGACCTCGGTTCATCACGTGTGCTTCTGGGTCGAAACATTTTGCTTCCTTGACTTTCATAATTCCATGGTTTTTCTTTCTTTAAATTCTAAATTTTGTTTCATTGAAGTTTCTTCTTTTATAATTCTTGTAACGAGAGAGGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGTGTCGATTTGTGATTAAAGATCACTCTTAAAGACTGAAACTTTGCCAGCAAAATAACTTATGGTGGAGATGGAGTTCATTTGATCAATGAGATGAAATTGAATGGTCGATGTGAAACTCTCGCACAATCACTAGAGGAACTTTGATGCCCATTGGTGATCACTCTAAAAACTTCAACAGCAAATATCCTACGGGTTTCATTTATACAGTTGGGATAAACTTCAATGACCACTGAAACTTCAGTGATCATCACTTTACAAATTTTGATATGCAGTAGTGATCACACTGAAACTTCATCAGCAACTGCTTATTGATTTGAGGTCTTATGTTAAGATTTTAATAATTTATATGTTATCTTGACAGTTAGGATAGTGTATGATAAAGACTCAGGTCGATCCAGAGGTTTTGGATTTGTGGATTTCGCAAATGAAAATGATGCACAGTGTGCAAAAGATGCAATGGATGGAAAGGCAAGTCTTTAATTAATAAGTAGTTTGATAAGGTTTAGTCTGTCAACCATAAATTACTGAAAGTGAAAGTCATTGAGTTACTTGCAGGCGGTATTAGGGCGGCCATTGAAGATAAGCTTTGCCCTTGAAAAGGTCCGTGGAGGACCTGTTGCCGTTCCTCGACTTTCAAACATCAACAACCTTGTGGGTCGAAGGTCTTGAAGCTCTTGGTATTTCATCTACATGTTGCATGAATATCTAATCTTGAACTATTCAATTCCTACTTCTAAATTTGATTTAGATCCTTGACTTGGTTTTGCTGGTATTGAAACCAATAGTATGAAGAACCTCAATTTAGTATTGTTTGATAATTACAGAGAAATACAATATCAATTTGGAAGAATTGACGGAACAAAATTCTTGTAGCACTAATCATGATTTATTTTTTATCAAATCATGATAGATAGTTCCCAATTTCTTTTATTAGAAATCTTGTTT AAAAGGGCCACTTCATACATTTTTAGAAATGAAAATGAAAATGAAAATGAGCTAGTTTTTACTATATTTTTTTTATTCGGCCTCTAAAGGCCAATTGTAAAATCTGTGTCCTCAATCTATGAGTGTATTTGTAATATCAAAAACTCGATCACAAGCAATCACCAATGCAATGATGAGCAACACGAACACCTTGCTACTGCTTGCTAGAAAAGCACTAACCAATATCCAAACTCCAATTCTTACCTTTCGTTGCTTCTGTTCTCAATCCACCTCCGCTCTCTCATCTTCTCCTTCTGCACCAAGCAATAAGCTCTTCGTAGCAGGGTTGTCTTGGTCCATGGATGAGAGATCATTGAAAGATGCGTTTTCTTCCTTTGGGGAGGTTACTGAAGTTAGGATAGTGTATGATAAAGACTCAGGTCGATCCAGAGGTTTTGGATTTGTGGATTTCGCAAATGAAAATGATGCACAGTGTGCAAAAGATGCAATGGATGGAAAGGCGGTATTAGGGCGGCCATTGAAGATAAGCTTTGCCCTTGAAAAGGTCCGTGGAGGACCTGTTGCCGTTCCTCGACTTTCAAACATCAACAACCTTGTGGGTCGAAGGTCTTGAAGCTCTTGGTATTTCATCTACATGTTGCATGAATATCTAATCTTGAACTATTCAATTCCTACTTCTAAATTTGATTTAGATCCTTGACTTGGTTTTGCTGGTATTGAAACCAATAGTATGAAGAACCTCAATTTAGTATTGTTTGATAATTACAGAGAAATACAATATCAATTTGGAAGAATTGACGGAACAAAATTCTTGTAGCACTAATCATGATTTATTTTTTATCAAATCATGATAGATAGTTCCCAATTTCTTTTATTAGAAATCTTGTTT ATGAGTGTATTTGTAATATCAAAAACTCGATCACAAGCAATCACCAATGCAATGATGAGCAACACGAACACCTTGCTACTGCTTGCTAGAAAAGCACTAACCAATATCCAAACTCCAATTCTTACCTTTCGTTGCTTCTGTTCTCAATCCACCTCCGCTCTCTCATCTTCTCCTTCTGCACCAAGCAATAAGCTCTTCGTAGCAGGGTTGTCTTGGTCCATGGATGAGAGATCATTGAAAGATGCGTTTTCTTCCTTTGGGGAGGTTACTGAAGTTAGGATAGTGTATGATAAAGACTCAGGTCGATCCAGAGGTTTTGGATTTGTGGATTTCGCAAATGAAAATGATGCACAGTGTGCAAAAGATGCAATGGATGGAAAGGCGGTATTAGGGCGGCCATTGAAGATAAGCTTTGCCCTTGAAAAGGTCCGTGGAGGACCTGTTGCCGTTCCTCGACTTTCAAACATCAACAACCTTGTGGGTCGAAGGTCTTGA MSVFVISKTRSQAITNAMMSNTNTLLLLARKALTNIQTPILTFRCFCSQSTSALSSSPSAPSNKLFVAGLSWSMDERSLKDAFSSFGEVTEVRIVYDKDSGRSRGFGFVDFANENDAQCAKDAMDGKAVLGRPLKISFALEKVRGGPVAVPRLSNINNLVGRRS*
BLAST of MELO3C019305 vs. Swiss-Prot
Match: RBG4_ARATH (Glycine-rich RNA-binding protein 4, mitochondrial OS=Arabidopsis thaliana GN=RBG4 PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.3e-18 Identity = 44/81 (54.32%), Postives = 58/81 (71.60%), Query Frame = 1
BLAST of MELO3C019305 vs. Swiss-Prot
Match: RBG3_ARATH (Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana GN=RBG3 PE=2 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 8.3e-18 Identity = 39/85 (45.88%), Postives = 62/85 (72.94%), Query Frame = 1
BLAST of MELO3C019305 vs. Swiss-Prot
Match: RBG2_ARATH (Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana GN=RBG2 PE=1 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.0e-16 Identity = 38/81 (46.91%), Postives = 57/81 (70.37%), Query Frame = 1
BLAST of MELO3C019305 vs. Swiss-Prot
Match: RBM3_CAPHI (RNA-binding protein 3 OS=Capra hircus GN=RBM3 PE=2 SV=2) HSP 1 Score: 83.6 bits (205), Expect = 2.3e-15 Identity = 40/87 (45.98%), Postives = 59/87 (67.82%), Query Frame = 1
BLAST of MELO3C019305 vs. Swiss-Prot
Match: RBM3_HUMAN (RNA-binding protein 3 OS=Homo sapiens GN=RBM3 PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 3.9e-15 Identity = 39/87 (44.83%), Postives = 59/87 (67.82%), Query Frame = 1
BLAST of MELO3C019305 vs. TrEMBL
Match: A0A0A0LQB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G416100 PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 2.0e-66 Identity = 133/145 (91.72%), Postives = 137/145 (94.48%), Query Frame = 1
BLAST of MELO3C019305 vs. TrEMBL
Match: W9QHY3_9ROSA (Glycine-rich RNA-binding protein 2 OS=Morus notabilis GN=L484_004070 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 1.6e-44 Identity = 99/151 (65.56%), Postives = 116/151 (76.82%), Query Frame = 1
BLAST of MELO3C019305 vs. TrEMBL
Match: D7TEC9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g01210 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 2.6e-42 Identity = 94/134 (70.15%), Postives = 110/134 (82.09%), Query Frame = 1
BLAST of MELO3C019305 vs. TrEMBL
Match: B9SH52_RICCO (Glycine-rich RNA-binding protein, putative OS=Ricinus communis GN=RCOM_1116940 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 5.4e-40 Identity = 85/118 (72.03%), Postives = 102/118 (86.44%), Query Frame = 1
BLAST of MELO3C019305 vs. TrEMBL
Match: A0A059DEB2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01097 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 5.4e-40 Identity = 93/134 (69.40%), Postives = 107/134 (79.85%), Query Frame = 1
BLAST of MELO3C019305 vs. TAIR10
Match: AT3G08000.1 (AT3G08000.1 RNA-binding (RRM/RBD/RNP motifs) family protein) HSP 1 Score: 161.0 bits (406), Expect = 6.3e-40 Identity = 78/99 (78.79%), Postives = 86/99 (86.87%), Query Frame = 1
BLAST of MELO3C019305 vs. TAIR10
Match: AT3G23830.1 (AT3G23830.1 glycine-rich RNA-binding protein 4) HSP 1 Score: 94.4 bits (233), Expect = 7.2e-20 Identity = 44/81 (54.32%), Postives = 58/81 (71.60%), Query Frame = 1
BLAST of MELO3C019305 vs. TAIR10
Match: AT5G61030.1 (AT5G61030.1 glycine-rich RNA-binding protein 3) HSP 1 Score: 91.7 bits (226), Expect = 4.7e-19 Identity = 39/85 (45.88%), Postives = 62/85 (72.94%), Query Frame = 1
BLAST of MELO3C019305 vs. TAIR10
Match: AT4G13850.1 (AT4G13850.1 glycine-rich RNA-binding protein 2) HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17 Identity = 38/81 (46.91%), Postives = 57/81 (70.37%), Query Frame = 1
BLAST of MELO3C019305 vs. TAIR10
Match: AT1G74230.1 (AT1G74230.1 glycine-rich RNA-binding protein 5) HSP 1 Score: 82.0 bits (201), Expect = 3.7e-16 Identity = 40/96 (41.67%), Postives = 63/96 (65.62%), Query Frame = 1
BLAST of MELO3C019305 vs. NCBI nr
Match: gi|659111830|ref|XP_008455929.1| (PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial [Cucumis melo]) HSP 1 Score: 320.1 bits (819), Expect = 2.3e-84 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1
BLAST of MELO3C019305 vs. NCBI nr
Match: gi|449468384|ref|XP_004151901.1| (PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like [Cucumis sativus]) HSP 1 Score: 261.5 bits (667), Expect = 9.7e-67 Identity = 134/146 (91.78%), Postives = 138/146 (94.52%), Query Frame = 1
BLAST of MELO3C019305 vs. NCBI nr
Match: gi|700208100|gb|KGN63219.1| (hypothetical protein Csa_2G416100 [Cucumis sativus]) HSP 1 Score: 260.0 bits (663), Expect = 2.8e-66 Identity = 133/145 (91.72%), Postives = 137/145 (94.48%), Query Frame = 1
BLAST of MELO3C019305 vs. NCBI nr
Match: gi|703073023|ref|XP_010089438.1| (Glycine-rich RNA-binding protein 2 [Morus notabilis]) HSP 1 Score: 187.2 bits (474), Expect = 2.3e-44 Identity = 99/151 (65.56%), Postives = 116/151 (76.82%), Query Frame = 1
BLAST of MELO3C019305 vs. NCBI nr
Match: gi|1009158381|ref|XP_015897259.1| (PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial [Ziziphus jujuba]) HSP 1 Score: 183.0 bits (463), Expect = 4.4e-43 Identity = 92/132 (69.70%), Postives = 111/132 (84.09%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |