MELO3C032020.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C032020.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Pentatricopeptide repeat-containing family protein
Location	chr06 : 13995491 .. 13997263 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAACAATTCTTCCTTCAAACTCTCCATTTCCCTCTCCAAACCTTCCTTCCGCTACTCCACATGGCATTCTCCACCACCGCCGGCAGCGGTGGCTGACCCTTTACTCGCCGCCGTCTCCACAGCCATCAACAACGCCCAAACAAAGCCTCTCGCCTCTTCTCTCCGCCGCCTCCTCCCTTCCTTCAAACCCCACCATTTTATCGACCTCATCAACCATAATCCTTTCTCTCTTTCCCCTCTCTCTCTCTTCTCATTCTTCAATTGGCTCTCTTCTATGCCCACCTTTCGCCACACTTCTCAATCCTACTGCGCTATGGCCAATTTCCTCTCTGCCCATCAAATGTTCGAAGAATGTCAATCGATTATACGATTTCTTGTCTCCCGCAAAGGCAAGGACTCGGCGGCTTCCGTCTTTGCAGCGATTCTTGACATTGCAGGTACGCGTTGTTCGAATTTTGTTTTTGATGCTTTGATGATTGCATATTGGGATTCCGGATTCGTTTCCGATGCTATTCAGTGTTTTAGGTTGGTTAGGAAGAGCAATTTTCAAATCCCGTTTCATGGTTGTGGGTACTTGCTTGATAAAATGATGAATTCGAACTCCCCTGTTACAATTTGGACGTTTTATTCAGAAATTTTGGATTCTGGGTTCCCGCCTAATGTGAAGTATTTCAATATTTTGATCAATAAGTTCTGTAAAGAGGGAAGTACTAGAGATGCCAAGTTGATTTTTGATGAAATTAGGAAGTGGGGTTTGCGTCCTACAACTGTTAGTTTCAATACCTTGATTAATGGGCTCTGTAAATCTAGAAATTTAGATGAGGGGTTTAGGTTGAAGAAGATCATGGAAGAGAATAGAATATATCCTGATGTTTTCACTTACAGCGTTCTGATTCATAGATTATGTAAGGAAGGTAGGTTAGATAATGCAGAACAACTGTTTGATGAAATGCAGAAGAGAGGATTGAGACCAAACGGCGTTACGTTCACCGCATTGATTGACGGGCAATGTAAGAGGAGACAAATTGACTCAGCTATGAACACTTACCACCAAATGTTAACCATGGGAGTGAAACCAGATTTGGTTATGTACAATACACTCTTATATGGCCTTTGCAAGGTTGGGGATGTTAATAAAGCTAGGAAGCTAATTGATGAAATGAGAATGGTGGGGATGAAACCTGATAAGATCTCTTACACCACACTCATAGATGGTTATTGCAAAGAGGGAGATTTAGAATCAGCCTTGGAGATTAGGAAAGGGATGAATGAAGAAGGGGTTGTGCTGGATAATGTAGCATTCACAGCCCTTATTTCAGGTTTCTGTAGAGATGGAAGGGTGAGGGATGCAGAGAGGACCTTGAGGGAGATGATGGAAGCCGGTATGAAACCCGATGATGCCACATATACTATGGTAATTGATGGGTATTGCAAGAAAGGCGATGTAAAGACGGGGTTTAAGATGCTGAAAGAGATGCAAATCAACGGCCATAAGCCTGGTGTCATAACTTATAATGTGCTTATGAATGGACTTTGCAAGCAAGGACAGATGAAGAATGCACATATGCTATTGGAAGCAATGCTTAATTTAGGAGTAACTCCAGATGACATTACATACAACATTCTTTTGGAAGGGCACTGTAAAAATGGAAAAGCAGAAGATTTGCTTAAACTCAGAAATGAGAAAGGACTCATAATAGATTACGCGTATTATACTTCTTTAGTCGGTGAATACGATAAATCCTTAAAGGATCGTCAAAAGAGGTGA

mRNA sequence

ATGGCCAACAATTCTTCCTTCAAACTCTCCATTTCCCTCTCCAAACCTTCCTTCCGCTACTCCACATGGCATTCTCCACCACCGCCGGCAGCGGTGGCTGACCCTTTACTCGCCGCCGTCTCCACAGCCATCAACAACGCCCAAACAAAGCCTCTCGCCTCTTCTCTCCGCCGCCTCCTCCCTTCCTTCAAACCCCACCATTTTATCGACCTCATCAACCATAATCCTTTCTCTCTTTCCCCTCTCTCTCTCTTCTCATTCTTCAATTGGCTCTCTTCTATGCCCACCTTTCGCCACACTTCTCAATCCTACTGCGCTATGGCCAATTTCCTCTCTGCCCATCAAATGTTCGAAGAATGTCAATCGATTATACGATTTCTTGTCTCCCGCAAAGGCAAGGACTCGGCGGCTTCCGTCTTTGCAGCGATTCTTGACATTGCAGGTACGCGTTGTTCGAATTTTGTTTTTGATGCTTTGATGATTGCATATTGGGATTCCGGATTCGTTTCCGATGCTATTCAGTGTTTTAGGTTGGTTAGGAAGAGCAATTTTCAAATCCCGTTTCATGGTTGTGGGTACTTGCTTGATAAAATGATGAATTCGAACTCCCCTGTTACAATTTGGACGTTTTATTCAGAAATTTTGGATTCTGGGTTCCCGCCTAATGTGAAGTATTTCAATATTTTGATCAATAAGTTCTGTAAAGAGGGAAGTACTAGAGATGCCAAGTTGATTTTTGATGAAATTAGGAAGTGGGGTTTGCGTCCTACAACTGTTAGTTTCAATACCTTGATTAATGGGCTCTGTAAATCTAGAAATTTAGATGAGGGGTTTAGGTTGAAGAAGATCATGGAAGAGAATAGAATATATCCTGATGTTTTCACTTACAGCGTTCTGATTCATAGATTATGTAAGGAAGGTAGGTTAGATAATGCAGAACAACTGTTTGATGAAATGCAGAAGAGAGGATTGAGACCAAACGGCGTTACGTTCACCGCATTGATTGACGGGCAATGTAAGAGGAGACAAATTGACTCAGCTATGAACACTTACCACCAAATGTTAACCATGGGAGTGAAACCAGATTTGGTTATGTACAATACACTCTTATATGGCCTTTGCAAGGTTGGGGATGTTAATAAAGCTAGGAAGCTAATTGATGAAATGAGAATGGTGGGGATGAAACCTGATAAGATCTCTTACACCACACTCATAGATGGTTATTGCAAAGAGGGAGATTTAGAATCAGCCTTGGAGATTAGGAAAGGGATGAATGAAGAAGGGGTTGTGCTGGATAATGTAGCATTCACAGCCCTTATTTCAGGTTTCTGTAGAGATGGAAGGGTGAGGGATGCAGAGAGGACCTTGAGGGAGATGATGGAAGCCGGTATGAAACCCGATGATGCCACATATACTATGGTAATTGATGGGTATTGCAAGAAAGGCGATGTAAAGACGGGGTTTAAGATGCTGAAAGAGATGCAAATCAACGGCCATAAGCCTGGTGTCATAACTTATAATGTGCTTATGAATGGACTTTGCAAGCAAGGACAGATGAAGAATGCACATATGCTATTGGAAGCAATGCTTAATTTAGGAGTAACTCCAGATGACATTACATACAACATTCTTTTGGAAGGGCACTGTAAAAATGGAAAAGCAGAAGATTTGCTTAAACTCAGAAATGAGAAAGGACTCATAATAGATTACGCGTATTATACTTCTTTAGTCGGTGAATACGATAAATCCTTAAAGGATCGTCAAAAGAGGTGA

Coding sequence (CDS)

ATGGCCAACAATTCTTCCTTCAAACTCTCCATTTCCCTCTCCAAACCTTCCTTCCGCTACTCCACATGGCATTCTCCACCACCGCCGGCAGCGGTGGCTGACCCTTTACTCGCCGCCGTCTCCACAGCCATCAACAACGCCCAAACAAAGCCTCTCGCCTCTTCTCTCCGCCGCCTCCTCCCTTCCTTCAAACCCCACCATTTTATCGACCTCATCAACCATAATCCTTTCTCTCTTTCCCCTCTCTCTCTCTTCTCATTCTTCAATTGGCTCTCTTCTATGCCCACCTTTCGCCACACTTCTCAATCCTACTGCGCTATGGCCAATTTCCTCTCTGCCCATCAAATGTTCGAAGAATGTCAATCGATTATACGATTTCTTGTCTCCCGCAAAGGCAAGGACTCGGCGGCTTCCGTCTTTGCAGCGATTCTTGACATTGCAGGTACGCGTTGTTCGAATTTTGTTTTTGATGCTTTGATGATTGCATATTGGGATTCCGGATTCGTTTCCGATGCTATTCAGTGTTTTAGGTTGGTTAGGAAGAGCAATTTTCAAATCCCGTTTCATGGTTGTGGGTACTTGCTTGATAAAATGATGAATTCGAACTCCCCTGTTACAATTTGGACGTTTTATTCAGAAATTTTGGATTCTGGGTTCCCGCCTAATGTGAAGTATTTCAATATTTTGATCAATAAGTTCTGTAAAGAGGGAAGTACTAGAGATGCCAAGTTGATTTTTGATGAAATTAGGAAGTGGGGTTTGCGTCCTACAACTGTTAGTTTCAATACCTTGATTAATGGGCTCTGTAAATCTAGAAATTTAGATGAGGGGTTTAGGTTGAAGAAGATCATGGAAGAGAATAGAATATATCCTGATGTTTTCACTTACAGCGTTCTGATTCATAGATTATGTAAGGAAGGTAGGTTAGATAATGCAGAACAACTGTTTGATGAAATGCAGAAGAGAGGATTGAGACCAAACGGCGTTACGTTCACCGCATTGATTGACGGGCAATGTAAGAGGAGACAAATTGACTCAGCTATGAACACTTACCACCAAATGTTAACCATGGGAGTGAAACCAGATTTGGTTATGTACAATACACTCTTATATGGCCTTTGCAAGGTTGGGGATGTTAATAAAGCTAGGAAGCTAATTGATGAAATGAGAATGGTGGGGATGAAACCTGATAAGATCTCTTACACCACACTCATAGATGGTTATTGCAAAGAGGGAGATTTAGAATCAGCCTTGGAGATTAGGAAAGGGATGAATGAAGAAGGGGTTGTGCTGGATAATGTAGCATTCACAGCCCTTATTTCAGGTTTCTGTAGAGATGGAAGGGTGAGGGATGCAGAGAGGACCTTGAGGGAGATGATGGAAGCCGGTATGAAACCCGATGATGCCACATATACTATGGTAATTGATGGGTATTGCAAGAAAGGCGATGTAAAGACGGGGTTTAAGATGCTGAAAGAGATGCAAATCAACGGCCATAAGCCTGGTGTCATAACTTATAATGTGCTTATGAATGGACTTTGCAAGCAAGGACAGATGAAGAATGCACATATGCTATTGGAAGCAATGCTTAATTTAGGAGTAACTCCAGATGACATTACATACAACATTCTTTTGGAAGGGCACTGTAAAAATGGAAAAGCAGAAGATTTGCTTAAACTCAGAAATGAGAAAGGACTCATAATAGATTACGCGTATTATACTTCTTTAGTCGGTGAATACGATAAATCCTTAAAGGATCGTCAAAAGAGGTGA

Protein sequence

MANNSSFKLSISLSKPSFRYSTWHSPPPPAAVADPLLAAVSTAINNAQTKPLASSLRRLLPSFKPHHFIDLINHNPFSLSPLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQMFEECQSIIRFLVSRKGKDSAASVFAAILDIAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKMMNSNSPVTIWTFYSEILDSGFPPNVKYFNILINKFCKEGSTRDAKLIFDEIRKWGLRPTTVSFNTLINGLCKSRNLDEGFRLKKIMEENRIYPDVFTYSVLIHRLCKEGRLDNAEQLFDEMQKRGLRPNGVTFTALIDGQCKRRQIDSAMNTYHQMLTMGVKPDLVMYNTLLYGLCKVGDVNKARKLIDEMRMVGMKPDKISYTTLIDGYCKEGDLESALEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMMEAGMKPDDATYTMVIDGYCKKGDVKTGFKMLKEMQINGHKPGVITYNVLMNGLCKQGQMKNAHMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKGLIIDYAYYTSLVGEYDKSLKDRQKR

Homology

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BLAST of MELO3C032020.2 vs. NCBI nr
Match: XP_008457121.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At1g09680 [Cucumis melo])

HSP 1 Score: 460.3 bits (1183), Expect = 9.9e-126
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MANNSSFKLSISLSKPSFRYSTWHSPPPPAAVADPLLAAVSTAINNAQTKPLASSLRRLL 60
           MANNSSFKLSISLSKPSFRYSTWHSPPPPAAVADPLLAAVSTAINNAQTKPLASSLRRLL
Sbjct: 1   MANNSSFKLSISLSKPSFRYSTWHSPPPPAAVADPLLAAVSTAINNAQTKPLASSLRRLL 60

Query: 61  PSFKPHHFIDLINHNPFSLSPLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQMFEEC 120
           PSFKPHHFIDLINHNPFSLSPLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQMFEEC
Sbjct: 61  PSFKPHHFIDLINHNPFSLSPLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQMFEEC 120

Query: 121 QSIIRFLVSRKGKDSAASVFAAILDIAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVR 180
           QSIIRFLVSRKGKDSAASVFAAILDIAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVR
Sbjct: 121 QSIIRFLVSRKGKDSAASVFAAILDIAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVR 180

Query: 181 KSNFQIPFHGCGYLLDKMMNSNSPVTIWTFYSEILDSGFPPNVKYFNI 229
           KSNFQIPFHGCGYLLDKMMNSNSPVTIWTFYSEILDSGFPPNVKYFNI
Sbjct: 181 KSNFQIPFHGCGYLLDKMMNSNSPVTIWTFYSEILDSGFPPNVKYFNI 228

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BLAST of MELO3C032020.2 vs. NCBI nr
Match: KGN57460.1 (hypothetical protein Csa_3G188330 [Cucumis sativus])

HSP 1 Score: 424.5 bits (1090), Expect = 6.0e-115
Identity = 210/228 (92.11%), Postives = 218/228 (95.61%), Query Frame = 0


Query: 1   MANNSSFKLSISLSKPSFRYSTWHSPPPPAAVADPLLAAVSTAINNAQTKPLASSLRRLL 60
           M NNSSFK SISLSKPSF YSTWHSPPP AA+ADP+LAAVSTAINNAQTKPLASSLRRLL
Sbjct: 15  MPNNSSFKHSISLSKPSFLYSTWHSPPPLAALADPVLAAVSTAINNAQTKPLASSLRRLL 74

Query: 61  PSFKPHHFIDLINHNPFSLSPLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQMFEEC 120
           PSFKPHHFIDLIN NPFSLSP SLFSFFNWLSS+PTFRHTSQSYCAMANFLSAHQMF+EC
Sbjct: 75  PSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQEC 134

Query: 121 QSIIRFLVSRKGKDSAASVFAAILDIAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVR 180
           QSIIRFLVSRKGKDSAASVFAAILD AGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVR
Sbjct: 135 QSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVR 194

Query: 181 KSNFQIPFHGCGYLLDKMMNSNSPVTIWTFYSEILDSGFPPNVKYFNI 229
            SNFQIPFHGCGYLLDKM+NSNSPVTIWTFYSEIL+ GFPP V+Y+NI
Sbjct: 195 NSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNI 242

HSP 2 Score: 66.2 bits (160), Expect = 4.1e-07
Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 0


Query: 557 LLKLRNEKGLIIDYAYYTSLVGEYDKSLKDRQKR 591
           LLKLRNEKGLI+DYAYYTSLV EY+KSLKDRQKR
Sbjct: 496 LLKLRNEKGLIVDYAYYTSLVSEYNKSLKDRQKR 529

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BLAST of MELO3C032020.2 vs. NCBI nr
Match: XP_004140820.2 (PREDICTED: putative pentatricopeptide repeat-containing protein At1g09680 [Cucumis sativus])

HSP 1 Score: 424.5 bits (1090), Expect = 6.0e-115
Identity = 210/228 (92.11%), Postives = 218/228 (95.61%), Query Frame = 0


Query: 1   MANNSSFKLSISLSKPSFRYSTWHSPPPPAAVADPLLAAVSTAINNAQTKPLASSLRRLL 60
           M NNSSFK SISLSKPSF YSTWHSPPP AA+ADP+LAAVSTAINNAQTKPLASSLRRLL
Sbjct: 15  MPNNSSFKHSISLSKPSFLYSTWHSPPPLAALADPVLAAVSTAINNAQTKPLASSLRRLL 74

Query: 61  PSFKPHHFIDLINHNPFSLSPLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQMFEEC 120
           PSFKPHHFIDLIN NPFSLSP SLFSFFNWLSS+PTFRHTSQSYCAMANFLSAHQMF+EC
Sbjct: 75  PSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQEC 134

Query: 121 QSIIRFLVSRKGKDSAASVFAAILDIAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVR 180
           QSIIRFLVSRKGKDSAASVFAAILD AGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVR
Sbjct: 135 QSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVR 194

Query: 181 KSNFQIPFHGCGYLLDKMMNSNSPVTIWTFYSEILDSGFPPNVKYFNI 229
            SNFQIPFHGCGYLLDKM+NSNSPVTIWTFYSEIL+ GFPP V+Y+NI
Sbjct: 195 NSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNI 242

[Close]

BLAST of MELO3C032020.2 vs. NCBI nr
Match: XP_022934877.1 (putative pentatricopeptide repeat-containing protein At1g09680 [Cucurbita moschata])

HSP 1 Score: 396.7 bits (1018), Expect = 1.3e-106
Identity = 202/232 (87.07%), Postives = 211/232 (90.95%), Query Frame = 0


Query: 1   MANNSSFKL---SISL-SKPSFRYSTWHSPPPPAAVADPLLAAVSTAINNAQTKPLASSL 60
           MA NS+FKL   S SL SKPSFRYSTWHSP PPAA ADP+LAAVSTAINN +TKPLASSL
Sbjct: 1   MAANSTFKLSNFSNSLPSKPSFRYSTWHSPLPPAAAADPVLAAVSTAINNVETKPLASSL 60

Query: 61  RRLLPSFKPHHFIDLINHNPFSLSPLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQM 120
           RRLLPSFKPHHFIDLINHNPFSLSP+SLFSFFNWLSS+PTFRHT QSYCAMANFL  HQM
Sbjct: 61  RRLLPSFKPHHFIDLINHNPFSLSPVSLFSFFNWLSSVPTFRHTLQSYCAMANFLCVHQM 120

Query: 121 FEECQSIIRFLVSRKGKDSAASVFAAILDIAGTRCSNFVFDALMIAYWDSGFVSDAIQCF 180
           FEE QSI+RFLVSRKGKDSAAS+FAAIL+I  TRCSNFVFDALMIAY DSGF+SDAIQCF
Sbjct: 121 FEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDSGFISDAIQCF 180

Query: 181 RLVRKSNFQIPFHGCGYLLDKMMNSNSPVTIWTFYSEILDSGFPPNVKYFNI 229
           RLVRK NFQIPF GC YLLDKMMNSNSPVTIWTFY EILDSGFPP VKYFNI
Sbjct: 181 RLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYFNI 232

[Close]

BLAST of MELO3C032020.2 vs. NCBI nr
Match: XP_023526542.1 (putative pentatricopeptide repeat-containing protein At1g09680 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396.7 bits (1018), Expect = 1.3e-106
Identity = 202/232 (87.07%), Postives = 211/232 (90.95%), Query Frame = 0


Query: 1   MANNSSFKL---SISL-SKPSFRYSTWHSPPPPAAVADPLLAAVSTAINNAQTKPLASSL 60
           MA NS+FKL   S SL SKPSFRYSTWHSP PPAA  DP+LAAVSTAINN +TKPLASSL
Sbjct: 28  MAANSTFKLSNFSNSLPSKPSFRYSTWHSPLPPAAAGDPVLAAVSTAINNVETKPLASSL 87

Query: 61  RRLLPSFKPHHFIDLINHNPFSLSPLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQM 120
           RRLLPSFKPHHFIDLINHNPFSLSP+SLFSFFNWLSS+PTFRHT QSYCAMANFL AHQM
Sbjct: 88  RRLLPSFKPHHFIDLINHNPFSLSPVSLFSFFNWLSSVPTFRHTLQSYCAMANFLCAHQM 147

Query: 121 FEECQSIIRFLVSRKGKDSAASVFAAILDIAGTRCSNFVFDALMIAYWDSGFVSDAIQCF 180
           FEE QSI+RFLVSRKGKDSAAS+FAAIL+I  TRCSNFVFDALMIAY DSGF+SDAIQCF
Sbjct: 148 FEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDSGFISDAIQCF 207

Query: 181 RLVRKSNFQIPFHGCGYLLDKMMNSNSPVTIWTFYSEILDSGFPPNVKYFNI 229
           RLVRK NFQIPF GC YLLDKMMNSNSPVTIWTFY EILDSGFPP VKYFNI
Sbjct: 208 RLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYFNI 259

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BLAST of MELO3C032020.2 vs. TAIR10
Match: AT1G09680.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 210.3 bits (534), Expect = 3.2e-54
Identity = 112/226 (49.56%), Postives = 146/226 (64.60%), Query Frame = 0


Query: 14  SKPSFRYSTWHSPPPPAAV---ADPLLAAVSTAINNAQTKPL--------ASSLRRLLPS 73
           S+ SF  STW+S    +A     DP+L  +S AI ++   P           S+R++LPS
Sbjct: 20  SRASFLLSTWYSQESVSAADNDDDPVLVKLSVAIRDSYKDPPLEFSSFTDCPSIRKVLPS 79

Query: 74  FKPHHFIDLINHNPFSLSPLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQMFEECQS 133
              HH +DLINHNP SL   S+F+FF ++SS P FR T ++Y  +A FL+ H+MF E QS
Sbjct: 80  LSVHHVVDLINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQS 139

Query: 134 IIRFLVSRKGKDSAASVFAAILDIAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRKS 193
           +I  +VSRKGK+SA+SVF +++++  T    F+ DALMI Y D GF+ DAIQCFRL RK 
Sbjct: 140 LIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKH 199

Query: 194 NFQIPFHGCGYLLDKMMNSNSPVTIWTFYSEILDSGFPPNVKYFNI 229
            F +P  GCG LLD+MM  N   TIW FY EILD+GFP NV  FNI
Sbjct: 200 RFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNI 245

[Close]

BLAST of MELO3C032020.2 vs. TAIR10
Match: AT2G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 53.1 bits (126), Expect = 6.6e-07
Identity = 34/118 (28.81%), Postives = 55/118 (46.61%), Query Frame = 0


Query: 81  PLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQMFEECQSIIRFLVSRKGKDSAASVF 140
           P   F FF W  +   F+H+ +SYC +A+ L   +M+ +  S+++ +V  K   +   VF
Sbjct: 122 PKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSK---ADCDVF 181

Query: 141 AAILDIAGTRCSNF-VFDALMIAYWDSGFVSDAIQCFRLVRKSNFQIPFHGCGYLLDK 198
             +          F VFDAL     D G + +AIQCF  +++         C  LL +
Sbjct: 182 DVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHR 236

[Close]

BLAST of MELO3C032020.2 vs. TAIR10
Match: AT5G38730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 51.6 bits (122), Expect = 1.9e-06
Identity = 33/129 (25.58%), Postives = 60/129 (46.51%), Query Frame = 0


Query: 81  PLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQMFEECQSIIRFLVSRKGKDSAASVF 140
           P   +SFF W  S+P+ +H+ QS   M   L+ H+ F+    ++  L  R+   S   + 
Sbjct: 60  PSLSWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLR 119

Query: 141 AAILDIA-GTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKMM 200
           + +  ++      + VF  LMI Y  +G ++D+I  F  +R    +     C  LL+ ++
Sbjct: 120 SLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLV 179

Query: 201 NSNSPVTIW 209
                 T+W
Sbjct: 180 KQRLTDTVW 188

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BLAST of MELO3C032020.2 vs. Swiss-Prot
Match: sp|O04491|PPR26_ARATH (Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana OX=3702 GN=At1g09680 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 5.8e-53
Identity = 112/226 (49.56%), Postives = 146/226 (64.60%), Query Frame = 0


Query: 14  SKPSFRYSTWHSPPPPAAV---ADPLLAAVSTAINNAQTKPL--------ASSLRRLLPS 73
           S+ SF  STW+S    +A     DP+L  +S AI ++   P           S+R++LPS
Sbjct: 20  SRASFLLSTWYSQESVSAADNDDDPVLVKLSVAIRDSYKDPPLEFSSFTDCPSIRKVLPS 79

Query: 74  FKPHHFIDLINHNPFSLSPLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQMFEECQS 133
              HH +DLINHNP SL   S+F+FF ++SS P FR T ++Y  +A FL+ H+MF E QS
Sbjct: 80  LSVHHVVDLINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQS 139

Query: 134 IIRFLVSRKGKDSAASVFAAILDIAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRKS 193
           +I  +VSRKGK+SA+SVF +++++  T    F+ DALMI Y D GF+ DAIQCFRL RK 
Sbjct: 140 LIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKH 199

Query: 194 NFQIPFHGCGYLLDKMMNSNSPVTIWTFYSEILDSGFPPNVKYFNI 229
            F +P  GCG LLD+MM  N   TIW FY EILD+GFP NV  FNI
Sbjct: 200 RFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNI 245

[Close]

BLAST of MELO3C032020.2 vs. Swiss-Prot
Match: sp|P0C894|PP143_ARATH (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.2e-05
Identity = 34/118 (28.81%), Postives = 55/118 (46.61%), Query Frame = 0


Query: 81  PLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQMFEECQSIIRFLVSRKGKDSAASVF 140
           P   F FF W  +   F+H+ +SYC +A+ L   +M+ +  S+++ +V  K   +   VF
Sbjct: 122 PKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSK---ADCDVF 181

Query: 141 AAILDIAGTRCSNF-VFDALMIAYWDSGFVSDAIQCFRLVRKSNFQIPFHGCGYLLDK 198
             +          F VFDAL     D G + +AIQCF  +++         C  LL +
Sbjct: 182 DVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHR 236

[Close]

BLAST of MELO3C032020.2 vs. Swiss-Prot
Match: sp|Q9FKR3|PP404_ARATH (Pentatricopeptide repeat-containing protein At5g38730 OS=Arabidopsis thaliana OX=3702 GN=At5g38730 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 3.5e-05
Identity = 33/129 (25.58%), Postives = 60/129 (46.51%), Query Frame = 0


Query: 81  PLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQMFEECQSIIRFLVSRKGKDSAASVF 140
           P   +SFF W  S+P+ +H+ QS   M   L+ H+ F+    ++  L  R+   S   + 
Sbjct: 60  PSLSWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLR 119

Query: 141 AAILDIA-GTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKMM 200
           + +  ++      + VF  LMI Y  +G ++D+I  F  +R    +     C  LL+ ++
Sbjct: 120 SLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLV 179

Query: 201 NSNSPVTIW 209
                 T+W
Sbjct: 180 KQRLTDTVW 188

[Close]

BLAST of MELO3C032020.2 vs. TrEMBL
Match: tr|A0A1S3C629|A0A1S3C629_CUCME (putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucumis melo OX=3656 GN=LOC103496868 PE=4 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 6.5e-126
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MANNSSFKLSISLSKPSFRYSTWHSPPPPAAVADPLLAAVSTAINNAQTKPLASSLRRLL 60
           MANNSSFKLSISLSKPSFRYSTWHSPPPPAAVADPLLAAVSTAINNAQTKPLASSLRRLL
Sbjct: 1   MANNSSFKLSISLSKPSFRYSTWHSPPPPAAVADPLLAAVSTAINNAQTKPLASSLRRLL 60

Query: 61  PSFKPHHFIDLINHNPFSLSPLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQMFEEC 120
           PSFKPHHFIDLINHNPFSLSPLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQMFEEC
Sbjct: 61  PSFKPHHFIDLINHNPFSLSPLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQMFEEC 120

Query: 121 QSIIRFLVSRKGKDSAASVFAAILDIAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVR 180
           QSIIRFLVSRKGKDSAASVFAAILDIAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVR
Sbjct: 121 QSIIRFLVSRKGKDSAASVFAAILDIAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVR 180

Query: 181 KSNFQIPFHGCGYLLDKMMNSNSPVTIWTFYSEILDSGFPPNVKYFNI 229
           KSNFQIPFHGCGYLLDKMMNSNSPVTIWTFYSEILDSGFPPNVKYFNI
Sbjct: 181 KSNFQIPFHGCGYLLDKMMNSNSPVTIWTFYSEILDSGFPPNVKYFNI 228

[Close]

BLAST of MELO3C032020.2 vs. TrEMBL
Match: tr|A0A0A0L668|A0A0A0L668_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G188330 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 4.0e-115
Identity = 210/228 (92.11%), Postives = 218/228 (95.61%), Query Frame = 0


Query: 1   MANNSSFKLSISLSKPSFRYSTWHSPPPPAAVADPLLAAVSTAINNAQTKPLASSLRRLL 60
           M NNSSFK SISLSKPSF YSTWHSPPP AA+ADP+LAAVSTAINNAQTKPLASSLRRLL
Sbjct: 15  MPNNSSFKHSISLSKPSFLYSTWHSPPPLAALADPVLAAVSTAINNAQTKPLASSLRRLL 74

Query: 61  PSFKPHHFIDLINHNPFSLSPLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQMFEEC 120
           PSFKPHHFIDLIN NPFSLSP SLFSFFNWLSS+PTFRHTSQSYCAMANFLSAHQMF+EC
Sbjct: 75  PSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQEC 134

Query: 121 QSIIRFLVSRKGKDSAASVFAAILDIAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVR 180
           QSIIRFLVSRKGKDSAASVFAAILD AGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVR
Sbjct: 135 QSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVR 194

Query: 181 KSNFQIPFHGCGYLLDKMMNSNSPVTIWTFYSEILDSGFPPNVKYFNI 229
            SNFQIPFHGCGYLLDKM+NSNSPVTIWTFYSEIL+ GFPP V+Y+NI
Sbjct: 195 NSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNI 242

HSP 2 Score: 66.2 bits (160), Expect = 2.7e-07
Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 0


Query: 557 LLKLRNEKGLIIDYAYYTSLVGEYDKSLKDRQKR 591
           LLKLRNEKGLI+DYAYYTSLV EY+KSLKDRQKR
Sbjct: 496 LLKLRNEKGLIVDYAYYTSLVSEYNKSLKDRQKR 529

[Close]

BLAST of MELO3C032020.2 vs. TrEMBL
Match: tr|A0A2P5EU75|A0A2P5EU75_9ROSA (Pentatricopeptide repeat OS=Trema orientalis OX=63057 GN=TorRG33x02_151670 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.9e-69
Identity = 140/222 (63.06%), Postives = 169/222 (76.13%), Query Frame = 0


Query: 1   MANNSSFKLSISLSKPSF-RYSTWHSPPPPAAVADPLLAAVSTAINNAQTKPLASSLRRL 60
           M NN S  L    ++ SF   +TW+SPP P    DP+L A+S AINN+QTKPL SSL+ L
Sbjct: 1   MRNNHSLSLGRIRNRNSFSTTATWYSPPLPPRHGDPVLLAISEAINNSQTKPLESSLKGL 60

Query: 61  LPSFKPHHFIDLINHNPFSLSPLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQMFEE 120
           LPS    H I+LIN NP SLSPLSL SFFNWL++ PTFRHT  SYCAMA+FL A ++   
Sbjct: 61  LPSLTARHLINLINFNPHSLSPLSLLSFFNWLTTQPTFRHTLHSYCAMAHFLCASRLDPH 120

Query: 121 CQSIIRFLVSRKGKDSAASVFAAILDIAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLV 180
            QS++RFLVSRKGKDSA+SVFAAI++  GT  SN VFD+L++AY DSGF+SDAIQCFRLV
Sbjct: 121 AQSLLRFLVSRKGKDSASSVFAAIVETRGTYQSNAVFDSLIMAYADSGFLSDAIQCFRLV 180

Query: 181 RKSNFQIPFHGCGYLLDKMMNSNSPVTIWTFYSEILDSGFPP 222
            K N+++P HGC YLL KMM SNSP ++W FYSEILD G+PP
Sbjct: 181 AKHNYRVPCHGCEYLLGKMMKSNSPGSVWLFYSEILDCGYPP 222

[Close]

BLAST of MELO3C032020.2 vs. TrEMBL
Match: tr|M5XHR3|M5XHR3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G166000 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 2.9e-65
Identity = 132/210 (62.86%), Postives = 157/210 (74.76%), Query Frame = 0


Query: 21  STWHSPPPPAAVADPLLAAVSTAINNA--QTKPLASSLRRLLPSFKPHHFIDLINHNPFS 80
           + W++ PP     DP L+A+S AI      ++PL SSLR+LLPS      I+LIN NP S
Sbjct: 34  TAWYNQPPTPHNEDPKLSAISDAIKTTTQNSQPLDSSLRKLLPSLTARDVINLINLNPHS 93

Query: 81  LSPLSLFSFFNWLSSMPTFRHTSQSYCAMANFLSAHQMFEECQSIIRFLVSRKGKDSAAS 140
           LSPLSL SFFNWLSS PTFRH  QSYC MA+FL AHQM+ + QS++R +VSRKGK++A+S
Sbjct: 94  LSPLSLLSFFNWLSSHPTFRHNIQSYCTMAHFLCAHQMYPQAQSLLRIVVSRKGKETASS 153

Query: 141 VFAAILDIAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKM 200
           VFA+IL+  GT  SN+VFDALM AY D GFVSDA QCFRL+RK NF+IPFH CG LLDKM
Sbjct: 154 VFASILETRGTHQSNYVFDALMNAYVDCGFVSDACQCFRLLRKHNFRIPFHACGCLLDKM 213

Query: 201 MNSNSPVTIWTFYSEILDSGFPPNVKYFNI 229
           +  NSPV  W FY EILDSGFPP V  FN+
Sbjct: 214 LKLNSPVVAWGFYLEILDSGFPPKVYNFNV 243

[Close]

BLAST of MELO3C032020.2 vs. TrEMBL
Match: tr|A0A2I4EAX4|A0A2I4EAX4_9ROSI (putative pentatricopeptide repeat-containing protein At1g09680 OS=Juglans regia OX=51240 GN=LOC108987931 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 8.4e-65
Identity = 126/194 (64.95%), Postives = 149/194 (76.80%), Query Frame = 0


Query: 34  DPLLAAVSTAINNAQTKPLASSLRRLLPSFKPHHFIDLINHNPFSLSPLSLFSFFNWLSS 93
           DPLL+A+S AI N + KP  SSL++LLPS   +H I+LIN NP SL P SL SFF+WLSS
Sbjct: 44  DPLLSAISEAILNTKGKPGDSSLKKLLPSLTANHIINLINLNPHSLPPHSLLSFFDWLSS 103

Query: 94  MPTFRHTSQSYCAMANFLSAHQMFEECQSIIRFLVSRKGKDSAASVFAAILDIAGTRCSN 153
            PTFRHT  SYC M +FLS+H M  + QS++RF+VSRKGKDSA SVFA +++  GT  S+
Sbjct: 104 QPTFRHTLHSYCTMIHFLSSHNMLPQAQSLLRFVVSRKGKDSACSVFACVIETKGTNYSS 163

Query: 154 FVFDALMIAYWDSGFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKMMNSNSPVTIWTFYSE 213
           FVFDALM AY D+GFVSDAIQCFRL+RK  F +PF GCGYLLDKMM SNSP + W FY E
Sbjct: 164 FVFDALMYAYADNGFVSDAIQCFRLIRKHKFGVPFRGCGYLLDKMMKSNSPASAWAFYME 223

Query: 214 ILDSGFPPNVKYFN 228
           ILD G+PP V  FN
Sbjct: 224 ILDCGYPPTVYNFN 237

The following BLAST results are available for this feature:

BLAST of MELO3C032020.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457121.1	9.9e-126	100.00	PREDICTED: putative pentatricopeptide repeat-containing protein At1g09680 [Cucum...	[more]
KGN57460.1	6.0e-115	92.11	hypothetical protein Csa_3G188330 [Cucumis sativus]	[more]
XP_004140820.2	6.0e-115	92.11	PREDICTED: putative pentatricopeptide repeat-containing protein At1g09680 [Cucum...	[more]
XP_022934877.1	1.3e-106	87.07	putative pentatricopeptide repeat-containing protein At1g09680 [Cucurbita moscha...	[more]
XP_023526542.1	1.3e-106	87.07	putative pentatricopeptide repeat-containing protein At1g09680 [Cucurbita pepo s...	[more]

BLAST of MELO3C032020.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09680.1	3.2e-54	49.56	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G02150.1	6.6e-07	28.81	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G38730.1	1.9e-06	25.58	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of MELO3C032020.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O04491\|PPR26_ARATH	5.8e-53	49.56	Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis th...	[more]
sp\|P0C894\|PP143_ARATH	1.2e-05	28.81	Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th...	[more]
sp\|Q9FKR3\|PP404_ARATH	3.5e-05	25.58	Pentatricopeptide repeat-containing protein At5g38730 OS=Arabidopsis thaliana OX...	[more]

BLAST of MELO3C032020.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C629\|A0A1S3C629_CUCME	6.5e-126	100.00	putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucumis melo O...	[more]
tr\|A0A0A0L668\|A0A0A0L668_CUCSA	4.0e-115	92.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G188330 PE=4 SV=1	[more]
tr\|A0A2P5EU75\|A0A2P5EU75_9ROSA	1.9e-69	63.06	Pentatricopeptide repeat OS=Trema orientalis OX=63057 GN=TorRG33x02_151670 PE=4 ...	[more]
tr\|M5XHR3\|M5XHR3_PRUPE	2.9e-65	62.86	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G166000 PE=4 SV=1	[more]
tr\|A0A2I4EAX4\|A0A2I4EAX4_9ROSI	8.4e-65	64.95	putative pentatricopeptide repeat-containing protein At1g09680 OS=Juglans regia ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0009451	RNA modification
biological_process	GO:0008150	biological_process
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C032020.2.1	MELO3C032020.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 425..495 e-value: 2.3E-21 score: 78.1 coord: 285..355 e-value: 1.1E-22 score: 82.4 coord: 199..284 e-value: 4.6E-19 score: 70.6 coord: 356..424 e-value: 2.5E-23 score: 84.6 coord: 496..565 e-value: 1.6E-19 score: 72.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 45..198 e-value: 1.7E-6 score: 29.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 506..529 coord: 124..365
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 256..305 e-value: 1.2E-15 score: 57.3 coord: 432..480 e-value: 1.7E-15 score: 56.8 coord: 361..410 e-value: 2.7E-16 score: 59.4 coord: 501..550 e-value: 5.0E-17 score: 61.7
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 218..249 e-value: 2.0E-6 score: 27.3 coord: 322..354 e-value: 3.8E-6 score: 26.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 504..537 e-value: 4.0E-8 score: 30.9 coord: 329..362 e-value: 2.3E-7 score: 28.6 coord: 294..327 e-value: 1.5E-10 score: 38.6 coord: 434..467 e-value: 6.9E-10 score: 36.5 coord: 226..257 e-value: 2.4E-6 score: 25.3 coord: 364..397 e-value: 9.7E-10 score: 36.0 coord: 259..293 e-value: 4.7E-8 score: 30.7 coord: 470..502 e-value: 3.5E-9 score: 34.3 coord: 399..432 e-value: 2.2E-8 score: 31.8 coord: 539..562 e-value: 0.0014 score: 16.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 362..396 score: 12.923
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 397..431 score: 12.211
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 152..186 score: 7.366
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 222..256 score: 11.312
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 537..567 score: 7.256
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 187..221 score: 5.031
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 467..501 score: 12.375
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 432..466 score: 13.285
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 292..326 score: 14.94
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 257..291 score: 11.213
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 502..536 score: 12.101
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 327..361 score: 11.367
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 100..134 score: 5.064
None	No IPR available	PANTHER	PTHR24015:SF923	SUBFAMILY NOT NAMED	coord: 18..590
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 18..590
None	No IPR available	SUPERFAMILY	SSF81901	HCP-like	coord: 333..542

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C032020.2	Csa3G188330	Cucumber (Chinese Long) v2	cumedB238
MELO3C032020.2	CSPI03G17770	Wild cucumber (PI 183967)	cpimedB239
MELO3C032020.2	Cucsa.108580	Cucumber (Gy14) v1	cgymedB144
MELO3C032020.2	CmaCh14G008690	Cucurbita maxima (Rimu)	cmamedB274
MELO3C032020.2	CmoCh14G008860	Cucurbita moschata (Rifu)	cmomedB261
MELO3C032020.2	Lsi05G002720	Bottle gourd (USVL1VR-Ls)	lsimedB384
MELO3C032020.2	Cp4.1LG03g05680	Cucurbita pepo (Zucchini)	cpemedB694
MELO3C032020.2	CsGy3G017740	Cucumber (Gy14) v2	cgybmedB215
MELO3C032020.2	Cla013136	Watermelon (97103) v1	medwmB448
MELO3C032020.2	ClCG05G010640	Watermelon (Charleston Gray)	medwcgB417
MELO3C032020.2	Cla97C05G092980	Watermelon (97103) v2	medwmbB424
MELO3C032020.2	Bhi01G001315	Wax gourd	medwgoB531
MELO3C032020.2	Carg24241	Silver-seed gourd	carmedB0185
MELO3C032020.2	CsaV3_3G017850	Cucumber (Chinese Long) v3	cucmedB246

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C032020.2	Silver-seed gourd	carmedB0771
MELO3C032020.2	Cucurbita maxima (Rimu)	cmamedB496
MELO3C032020.2	Cucurbita moschata (Rifu)	cmomedB483
MELO3C032020.2	Cucurbita pepo (Zucchini)	cpemedB630