Bhi01G001315 (gene) Wax gourd

Overview
NameBhi01G001315
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionPentatricopeptide repeat-containing protein 11
Locationchr1 : 37654154 .. 37655608 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAATTTCCTCTCCGCCCATCAAATGTTCGAAGATTCTCAATCGGTTGTTCGATTTCTCGTTTCCCGCAAAGGCAAGGACTCGGCGGCTTCGGTCTTTGCAGCGGTTCTTGAAATTTCAGGTACGCGTTGTTCGAATTTTGTATTTGATGCTTTGATGATTGCGTATTCGGATTCCGGGTTCGTCTCCGATGCGATTCAGTGTTTTAGGTTGGTTAGGAAGAGCAATTTTCAAATCCCGTTTCATGGTTGTGGGTACTTGCTTGATAAAATGACGAATTCGAACTCCCCTGTTATGATCTGGACGTTTTATTCGGAAATTTTGGATTCTGGGTTCCCGCCTAAAGTCAAGTACTTCAATATTTTGATCAATAAGTTCTGTAAAGAGGGAAGTATTAGAGATGCCAGGTTGATTTTTGATGAAATTGGGAAGCGGGGCTTGCGGCCTACAACTGTTAGTTTCAATACCTTGATTAACGGGTTCTGTAAATCTAGAAATTTAGATGAGGGGTTTAGGTTGAAGAAGATCATGGAAGAGAATAGGATATATCCTGATGTCTTCACTTATAGTGTTCTGATTCATGGGTTATGCAAGGAAGGTAGGTTAGATGATGCAGAACGACTGTTTGATGAAATGCAACAAAGAGGATTGAGACCAAACGACGTTACATTCACCGCATTGATTGACGGGCAATGCAGGAGCGGGCGAGTTGACTCAGCCATGAACACTTATCAGCAAATGTTAACCATGGGAGTGAAACCAGATTTGGTTATGTACAATACACTCTTAAATGGCCTTTGCAAGGTTGGGGAAGTAAATGAAGCTAGGAAACTAATTGATGAAATGAAAATGGTGGGGTTGAAACCTGATAAAATCACTTACACTACACTCATAGATGGTTACTGCAAAGAGGGAGATTTAGAATCAGCCATGGAGATTAGGAAAGGGATGAATGAAGAAGGGGTTGTGCTTGATAATGTAGCATTCACAGCCCTTATTTCAGGTTTGTGTAGAGATGGAAAGGTCAAGGATGCAGAGAGGACCTTGAGGGAGATGACGGAAGCCGGAATGAAACCCGACGATGCCACGTATACTATGGTGATTGACGGGTATTGCAAGAAAGGCGATGTTAAGACGGGGTTCAAGCTGCTGAAAGAGATGCAGACCAATGGCCATAACCCTGGTGTCATAACTTATAATGTGCTTATGAATGGACTTTGCAAGCAAGGACAGATGAAGAATGCAAATATGCTATTGGAAGCAATGCTTAATTTAGGAGTAACTCCAGATGACATTACATACAACATTCTTTTGGAAGGGCACTGTAAAAATGGAAGACCAGAAGATTTGCTTAAACTCAGAAATGAGAAAGGACTCGTAGTAGATTATGCATGTTATACTTCTTTAGTTGGCGAATACGATAAATGCATAAAGGATCGTCGAAAGAGGTGA

mRNA sequence

ATGGCTAATTTCCTCTCCGCCCATCAAATGTTCGAAGATTCTCAATCGGTTGTTCGATTTCTCGTTTCCCGCAAAGGCAAGGACTCGGCGGCTTCGGTCTTTGCAGCGGTTCTTGAAATTTCAGGTACGCGTTGTTCGAATTTTGTATTTGATGCTTTGATGATTGCGTATTCGGATTCCGGGTTCGTCTCCGATGCGATTCAGTGTTTTAGGTTGGTTAGGAAGAGCAATTTTCAAATCCCGTTTCATGGTTGTGGGTACTTGCTTGATAAAATGACGAATTCGAACTCCCCTGTTATGATCTGGACGTTTTATTCGGAAATTTTGGATTCTGGGTTCCCGCCTAAAGTCAAGTACTTCAATATTTTGATCAATAAGTTCTGTAAAGAGGGAAGTATTAGAGATGCCAGGTTGATTTTTGATGAAATTGGGAAGCGGGGCTTGCGGCCTACAACTGTTAGTTTCAATACCTTGATTAACGGGTTCTGTAAATCTAGAAATTTAGATGAGGGGTTTAGGTTGAAGAAGATCATGGAAGAGAATAGGATATATCCTGATGTCTTCACTTATAGTGTTCTGATTCATGGGTTATGCAAGGAAGGTAGGTTAGATGATGCAGAACGACTGTTTGATGAAATGCAACAAAGAGGATTGAGACCAAACGACGTTACATTCACCGCATTGATTGACGGGCAATGCAGGAGCGGGCGAGTTGACTCAGCCATGAACACTTATCAGCAAATGTTAACCATGGGAGTGAAACCAGATTTGGTTATGTACAATACACTCTTAAATGGCCTTTGCAAGGTTGGGGAAGTAAATGAAGCTAGGAAACTAATTGATGAAATGAAAATGGTGGGGTTGAAACCTGATAAAATCACTTACACTACACTCATAGATGGTTACTGCAAAGAGGGAGATTTAGAATCAGCCATGGAGATTAGGAAAGGGATGAATGAAGAAGGGGTTGTGCTTGATAATGTAGCATTCACAGCCCTTATTTCAGGTTTGTGTAGAGATGGAAAGGTCAAGGATGCAGAGAGGACCTTGAGGGAGATGACGGAAGCCGGAATGAAACCCGACGATGCCACGTATACTATGGTGATTGACGGGTATTGCAAGAAAGGCGATGTTAAGACGGGGTTCAAGCTGCTGAAAGAGATGCAGACCAATGGCCATAACCCTGGTGTCATAACTTATAATGTGCTTATGAATGGACTTTGCAAGCAAGGACAGATGAAGAATGCAAATATGCTATTGGAAGCAATGCTTAATTTAGGAGTAACTCCAGATGACATTACATACAACATTCTTTTGGAAGGGCACTGTAAAAATGGAAGACCAGAAGATTTGCTTAAACTCAGAAATGAGAAAGGACTCGTAGTAGATTATGCATGTTATACTTCTTTAGTTGGCGAATACGATAAATGCATAAAGGATCGTCGAAAGAGGTGA

Coding sequence (CDS)

ATGGCTAATTTCCTCTCCGCCCATCAAATGTTCGAAGATTCTCAATCGGTTGTTCGATTTCTCGTTTCCCGCAAAGGCAAGGACTCGGCGGCTTCGGTCTTTGCAGCGGTTCTTGAAATTTCAGGTACGCGTTGTTCGAATTTTGTATTTGATGCTTTGATGATTGCGTATTCGGATTCCGGGTTCGTCTCCGATGCGATTCAGTGTTTTAGGTTGGTTAGGAAGAGCAATTTTCAAATCCCGTTTCATGGTTGTGGGTACTTGCTTGATAAAATGACGAATTCGAACTCCCCTGTTATGATCTGGACGTTTTATTCGGAAATTTTGGATTCTGGGTTCCCGCCTAAAGTCAAGTACTTCAATATTTTGATCAATAAGTTCTGTAAAGAGGGAAGTATTAGAGATGCCAGGTTGATTTTTGATGAAATTGGGAAGCGGGGCTTGCGGCCTACAACTGTTAGTTTCAATACCTTGATTAACGGGTTCTGTAAATCTAGAAATTTAGATGAGGGGTTTAGGTTGAAGAAGATCATGGAAGAGAATAGGATATATCCTGATGTCTTCACTTATAGTGTTCTGATTCATGGGTTATGCAAGGAAGGTAGGTTAGATGATGCAGAACGACTGTTTGATGAAATGCAACAAAGAGGATTGAGACCAAACGACGTTACATTCACCGCATTGATTGACGGGCAATGCAGGAGCGGGCGAGTTGACTCAGCCATGAACACTTATCAGCAAATGTTAACCATGGGAGTGAAACCAGATTTGGTTATGTACAATACACTCTTAAATGGCCTTTGCAAGGTTGGGGAAGTAAATGAAGCTAGGAAACTAATTGATGAAATGAAAATGGTGGGGTTGAAACCTGATAAAATCACTTACACTACACTCATAGATGGTTACTGCAAAGAGGGAGATTTAGAATCAGCCATGGAGATTAGGAAAGGGATGAATGAAGAAGGGGTTGTGCTTGATAATGTAGCATTCACAGCCCTTATTTCAGGTTTGTGTAGAGATGGAAAGGTCAAGGATGCAGAGAGGACCTTGAGGGAGATGACGGAAGCCGGAATGAAACCCGACGATGCCACGTATACTATGGTGATTGACGGGTATTGCAAGAAAGGCGATGTTAAGACGGGGTTCAAGCTGCTGAAAGAGATGCAGACCAATGGCCATAACCCTGGTGTCATAACTTATAATGTGCTTATGAATGGACTTTGCAAGCAAGGACAGATGAAGAATGCAAATATGCTATTGGAAGCAATGCTTAATTTAGGAGTAACTCCAGATGACATTACATACAACATTCTTTTGGAAGGGCACTGTAAAAATGGAAGACCAGAAGATTTGCTTAAACTCAGAAATGAGAAAGGACTCGTAGTAGATTATGCATGTTATACTTCTTTAGTTGGCGAATACGATAAATGCATAAAGGATCGTCGAAAGAGGTGA

Protein sequence

MANFLSAHQMFEDSQSVVRFLVSRKGKDSAASVFAAVLEISGTRCSNFVFDALMIAYSDSGFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKMTNSNSPVMIWTFYSEILDSGFPPKVKYFNILINKFCKEGSIRDARLIFDEIGKRGLRPTTVSFNTLINGFCKSRNLDEGFRLKKIMEENRIYPDVFTYSVLIHGLCKEGRLDDAERLFDEMQQRGLRPNDVTFTALIDGQCRSGRVDSAMNTYQQMLTMGVKPDLVMYNTLLNGLCKVGEVNEARKLIDEMKMVGLKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGLCRDGKVKDAERTLREMTEAGMKPDDATYTMVIDGYCKKGDVKTGFKLLKEMQTNGHNPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGRPEDLLKLRNEKGLVVDYACYTSLVGEYDKCIKDRRKR
Homology
[Close]
BLAST of Bhi01G001315 vs. TAIR10
Match: AT1G09680.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 162.5 bits (410), Expect = 6.3e-40
Identity = 77/137 (56.20%), Postives = 100/137 (72.99%), Query Frame = 0 

Query: 1   MANFLSAHQMFEDSQSVVRFLVSRKGKDSAASVFAAVLEISGTRCSNFVFDALMIAYSDS 60
           +A FL+ H+MF ++QS++  +VSRKGK+SA+SVF +++E+  T    F+ DALMI Y+D 
Sbjct: 124 LARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDL 183

Query: 61  GFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKMTNSNSPVMIWTFYSEILDSGFPPKVKYF 120
           GF+ DAIQCFRL RK  F +P  GCG LLD+M   N    IW FY EILD+GFP  V  F
Sbjct: 184 GFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVF 243

Query: 121 NILINKFCKEGSIRDAR 138
           NIL+NKFCKEG+I DA+
Sbjct: 244 NILMNKFCKEGNISDAQ 260

[Close]
BLAST of Bhi01G001315 vs. TAIR10
Match: AT5G25630.2 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 42.7 bits (99), Expect = 7.3e-04
Identity = 28/116 (24.14%), Postives = 56/116 (48.28%), Query Frame = 0 

Query: 24  RKGKDSAASVFAAVLEISGTRCSNFVFDALMIAYSDSGFVSDAIQCFRLVRKSNFQIPFH 83
           +K   S +S+ + V E SGT+  +  F+A++ A+S+SG + DA+Q    +++        
Sbjct: 93  QKQYGSISSIVSEV-EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTS 152

Query: 84  GCGYLLDKMTNSNSPVMIWTFYSEILDSG---FPPKVKYFNILINKFCKEGSIRDA 137
               L+     +  P         +L+ G     P ++ FN+L+  +CK+  + +A
Sbjct: 153 TYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEA 207

[Close]
BLAST of Bhi01G001315 vs. Swiss-Prot
Match: sp|O04491|PPR26_ARATH (Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana OX=3702 GN=At1g09680 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.1e-38
Identity = 77/137 (56.20%), Postives = 100/137 (72.99%), Query Frame = 0 

Query: 1   MANFLSAHQMFEDSQSVVRFLVSRKGKDSAASVFAAVLEISGTRCSNFVFDALMIAYSDS 60
           +A FL+ H+MF ++QS++  +VSRKGK+SA+SVF +++E+  T    F+ DALMI Y+D 
Sbjct: 124 LARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDL 183

Query: 61  GFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKMTNSNSPVMIWTFYSEILDSGFPPKVKYF 120
           GF+ DAIQCFRL RK  F +P  GCG LLD+M   N    IW FY EILD+GFP  V  F
Sbjct: 184 GFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVF 243

Query: 121 NILINKFCKEGSIRDAR 138
           NIL+NKFCKEG+I DA+
Sbjct: 244 NILMNKFCKEGNISDAQ 260

[Close]
BLAST of Bhi01G001315 vs. TrEMBL
Match: tr|A0A0A0L668|A0A0A0L668_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G188330 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.3e-58
Identity = 112/129 (86.82%), Postives = 122/129 (94.57%), Query Frame = 0 

Query: 1   MANFLSAHQMFEDSQSVVRFLVSRKGKDSAASVFAAVLEISGTRCSNFVFDALMIAYSDS 60
           MANFLSAHQMF++ QS++RFLVSRKGKDSAASVFAA+L+ +GTRCSNFVFDALMIAY DS
Sbjct: 121 MANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDS 180

Query: 61  GFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKMTNSNSPVMIWTFYSEILDSGFPPKVKYF 120
           GFVSDAIQCFRLVR SNFQIPFHGCGYLLDKM NSNSPV IWTFYSEIL+ GFPPKV+Y+
Sbjct: 181 GFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYY 240

Query: 121 NILINKFCK 130
           NILINKFCK
Sbjct: 241 NILINKFCK 249


HSP 2 Score: 59.3 bits (142), Expect = 2.7e-05
Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 0 

Query: 451 LLKLRNEKGLVVDYACYTSLVGEYDKCIKDRRKR 485
           LLKLRNEKGL+VDYA YTSLV EY+K +KDR+KR
Sbjct: 496 LLKLRNEKGLIVDYAYYTSLVSEYNKSLKDRQKR 529

[Close]
BLAST of Bhi01G001315 vs. TrEMBL
Match: tr|A0A1S3C629|A0A1S3C629_CUCME (putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucumis melo OX=3656 GN=LOC103496868 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 5.3e-57
Identity = 111/122 (90.98%), Postives = 117/122 (95.90%), Query Frame = 0 

Query: 1   MANFLSAHQMFEDSQSVVRFLVSRKGKDSAASVFAAVLEISGTRCSNFVFDALMIAYSDS 60
           MANFLSAHQMFE+ QS++RFLVSRKGKDSAASVFAA+L+I+GTRCSNFVFDALMIAY DS
Sbjct: 107 MANFLSAHQMFEECQSIIRFLVSRKGKDSAASVFAAILDIAGTRCSNFVFDALMIAYWDS 166

Query: 61  GFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKMTNSNSPVMIWTFYSEILDSGFPPKVKYF 120
           GFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKM NSNSPV IWTFYSEILDSGFPP VKYF
Sbjct: 167 GFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKMMNSNSPVTIWTFYSEILDSGFPPNVKYF 226

Query: 121 NI 123
           NI
Sbjct: 227 NI 228

[Close]
BLAST of Bhi01G001315 vs. TrEMBL
Match: tr|M5XHR3|M5XHR3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G166000 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.2e-45
Identity = 92/137 (67.15%), Postives = 112/137 (81.75%), Query Frame = 0 

Query: 1   MANFLSAHQMFEDSQSVVRFLVSRKGKDSAASVFAAVLEISGTRCSNFVFDALMIAYSDS 60
           MA+FL AHQM+  +QS++R +VSRKGK++A+SVFA++LE  GT  SN+VFDALM AY D 
Sbjct: 122 MAHFLCAHQMYPQAQSLLRIVVSRKGKETASSVFASILETRGTHQSNYVFDALMNAYVDC 181

Query: 61  GFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKMTNSNSPVMIWTFYSEILDSGFPPKVKYF 120
           GFVSDA QCFRL+RK NF+IPFH CG LLDKM   NSPV+ W FY EILDSGFPPKV  F
Sbjct: 182 GFVSDACQCFRLLRKHNFRIPFHACGCLLDKMLKLNSPVVAWGFYLEILDSGFPPKVYNF 241

Query: 121 NILINKFCKEGSIRDAR 138
           N+L++K CKEG IR+A+
Sbjct: 242 NVLMHKLCKEGEIREAQ 258

[Close]
BLAST of Bhi01G001315 vs. TrEMBL
Match: tr|A0A1Q3AY41|A0A1Q3AY41_CEPFO (PPR domain-containing protein/PPR_1 domain-containing protein/PPR_2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_04003 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 2.8e-42
Identity = 86/137 (62.77%), Postives = 109/137 (79.56%), Query Frame = 0 

Query: 1   MANFLSAHQMFEDSQSVVRFLVSRKGKDSAASVFAAVLEISGTRCSNFVFDALMIAYSDS 60
           M +FL A QM   + S++RF+VSRKGK SA+SVF ++LE  GT  SN+VFDALMIAY++S
Sbjct: 1   MTHFLIARQMLPQALSLLRFVVSRKGKGSASSVFDSLLETRGTHFSNYVFDALMIAYTES 60

Query: 61  GFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKMTNSNSPVMIWTFYSEILDSGFPPKVKYF 120
           GF+ DAIQCFRLV+K NF++PF GCG LLDKM  +NSPVM+W FY EILD G+ P V  F
Sbjct: 61  GFIIDAIQCFRLVKKHNFRVPFSGCGCLLDKMLKTNSPVMVWGFYLEILDCGYLPNVYVF 120

Query: 121 NILINKFCKEGSIRDAR 138
           N+L++KFC EG I+DA+
Sbjct: 121 NVLMHKFCTEGKIKDAQ 137

[Close]
BLAST of Bhi01G001315 vs. TrEMBL
Match: tr|A0A0B0N0W6|A0A0B0N0W6_GOSAR (Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_25233 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 2.2e-39
Identity = 83/137 (60.58%), Postives = 105/137 (76.64%), Query Frame = 0 

Query: 1   MANFLSAHQMFEDSQSVVRFLVSRKGKDSAASVFAAVLEISGTRCSNFVFDALMIAYSDS 60
           M++FL AH M   ++ ++ FLVSRKGKDSA+S+FA+VLE  GT   +FVFD+LMIAY+D 
Sbjct: 100 MSHFLVAHNMLPQARFLLNFLVSRKGKDSASSIFASVLETKGTYQCDFVFDSLMIAYTDL 159

Query: 61  GFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKMTNSNSPVMIWTFYSEILDSGFPPKVKYF 120
           GFVSDAIQCFRLVRK   ++PF GC YL D+M   +SP++   FY EILD GFPP V  F
Sbjct: 160 GFVSDAIQCFRLVRKHKLRVPFRGCKYLFDRMMKISSPIVSLGFYMEILDYGFPPNVYSF 219

Query: 121 NILINKFCKEGSIRDAR 138
           NIL+NK C+EG I+DA+
Sbjct: 220 NILMNKLCREGLIKDAQ 236

[Close]
BLAST of Bhi01G001315 vs. NCBI nr
Match: XP_023526542.1 (putative pentatricopeptide repeat-containing protein At1g09680 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253.1 bits (645), Expect = 2.0e-63
Identity = 122/137 (89.05%), Postives = 129/137 (94.16%), Query Frame = 0 

Query: 1   MANFLSAHQMFEDSQSVVRFLVSRKGKDSAASVFAAVLEISGTRCSNFVFDALMIAYSDS 60
           MANFL AHQMFE+SQS+VRFLVSRKGKDSAAS+FAA+LEI+ TRCSNFVFDALMIAYSDS
Sbjct: 138 MANFLCAHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 197

Query: 61  GFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKMTNSNSPVMIWTFYSEILDSGFPPKVKYF 120
           GF+SDAIQCFRLVRK NFQIPF GC YLLDKM NSNSPV IWTFY EILDSGFPPKVKYF
Sbjct: 198 GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 257

Query: 121 NILINKFCKEGSIRDAR 138
           NILINKFCK+GSIRDAR
Sbjct: 258 NILINKFCKQGSIRDAR 274

[Close]
BLAST of Bhi01G001315 vs. NCBI nr
Match: XP_022934877.1 (putative pentatricopeptide repeat-containing protein At1g09680 [Cucurbita moschata])

HSP 1 Score: 251.5 bits (641), Expect = 5.7e-63
Identity = 121/137 (88.32%), Postives = 128/137 (93.43%), Query Frame = 0 

Query: 1   MANFLSAHQMFEDSQSVVRFLVSRKGKDSAASVFAAVLEISGTRCSNFVFDALMIAYSDS 60
           MANFL  HQMFE+SQS+VRFLVSRKGKDSAAS+FAA+LEI+ TRCSNFVFDALMIAYSDS
Sbjct: 111 MANFLCVHQMFEESQSIVRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 170

Query: 61  GFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKMTNSNSPVMIWTFYSEILDSGFPPKVKYF 120
           GF+SDAIQCFRLVRK NFQIPF GC YLLDKM NSNSPV IWTFY EILDSGFPPKVKYF
Sbjct: 171 GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 230

Query: 121 NILINKFCKEGSIRDAR 138
           NILINKFCK+GSIRDAR
Sbjct: 231 NILINKFCKQGSIRDAR 247

[Close]
BLAST of Bhi01G001315 vs. NCBI nr
Match: XP_022983327.1 (putative pentatricopeptide repeat-containing protein At1g09680 [Cucurbita maxima])

HSP 1 Score: 251.1 bits (640), Expect = 7.5e-63
Identity = 120/137 (87.59%), Postives = 128/137 (93.43%), Query Frame = 0 

Query: 1   MANFLSAHQMFEDSQSVVRFLVSRKGKDSAASVFAAVLEISGTRCSNFVFDALMIAYSDS 60
           MANFL  HQMFE+SQS++RFLVSRKGKDSAAS+FAA+LEI+ TRCSNFVFDALMIAYSDS
Sbjct: 111 MANFLCTHQMFEESQSIIRFLVSRKGKDSAASIFAAILEITDTRCSNFVFDALMIAYSDS 170

Query: 61  GFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKMTNSNSPVMIWTFYSEILDSGFPPKVKYF 120
           GF+SDAIQCFRLVRK NFQIPF GC YLLDKM NSNSPV IWTFY EILDSGFPPKVKYF
Sbjct: 171 GFISDAIQCFRLVRKRNFQIPFRGCEYLLDKMMNSNSPVTIWTFYLEILDSGFPPKVKYF 230

Query: 121 NILINKFCKEGSIRDAR 138
           NILINKFCK+GSIRDAR
Sbjct: 231 NILINKFCKQGSIRDAR 247

[Close]
BLAST of Bhi01G001315 vs. NCBI nr
Match: KGN57460.1 (hypothetical protein Csa_3G188330 [Cucumis sativus])

HSP 1 Score: 236.5 bits (602), Expect = 1.9e-58
Identity = 112/129 (86.82%), Postives = 122/129 (94.57%), Query Frame = 0 

Query: 1   MANFLSAHQMFEDSQSVVRFLVSRKGKDSAASVFAAVLEISGTRCSNFVFDALMIAYSDS 60
           MANFLSAHQMF++ QS++RFLVSRKGKDSAASVFAA+L+ +GTRCSNFVFDALMIAY DS
Sbjct: 121 MANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDS 180

Query: 61  GFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKMTNSNSPVMIWTFYSEILDSGFPPKVKYF 120
           GFVSDAIQCFRLVR SNFQIPFHGCGYLLDKM NSNSPV IWTFYSEIL+ GFPPKV+Y+
Sbjct: 181 GFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYY 240

Query: 121 NILINKFCK 130
           NILINKFCK
Sbjct: 241 NILINKFCK 249


HSP 2 Score: 59.3 bits (142), Expect = 4.2e-05
Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 0 

Query: 451 LLKLRNEKGLVVDYACYTSLVGEYDKCIKDRRKR 485
           LLKLRNEKGL+VDYA YTSLV EY+K +KDR+KR
Sbjct: 496 LLKLRNEKGLIVDYAYYTSLVSEYNKSLKDRQKR 529

[Close]
BLAST of Bhi01G001315 vs. NCBI nr
Match: XP_004140820.2 (PREDICTED: putative pentatricopeptide repeat-containing protein At1g09680 [Cucumis sativus])

HSP 1 Score: 236.5 bits (602), Expect = 1.9e-58
Identity = 112/129 (86.82%), Postives = 122/129 (94.57%), Query Frame = 0 

Query: 1   MANFLSAHQMFEDSQSVVRFLVSRKGKDSAASVFAAVLEISGTRCSNFVFDALMIAYSDS 60
           MANFLSAHQMF++ QS++RFLVSRKGKDSAASVFAA+L+ +GTRCSNFVFDALMIAY DS
Sbjct: 121 MANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDS 180

Query: 61  GFVSDAIQCFRLVRKSNFQIPFHGCGYLLDKMTNSNSPVMIWTFYSEILDSGFPPKVKYF 120
           GFVSDAIQCFRLVR SNFQIPFHGCGYLLDKM NSNSPV IWTFYSEIL+ GFPPKV+Y+
Sbjct: 181 GFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYY 240

Query: 121 NILINKFCK 130
           NILINKFCK
Sbjct: 241 NILINKFCK 249

The following BLAST results are available for this feature:
BLAST of Bhi01G001315 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G09680.16.3e-4056.20Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G25630.27.3e-0424.14Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Bhi01G001315 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O04491|PPR26_ARATH1.1e-3856.20Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis th... [more]
BLAST of Bhi01G001315 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L668|A0A0A0L668_CUCSA1.3e-5886.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G188330 PE=4 SV=1[more]
tr|A0A1S3C629|A0A1S3C629_CUCME5.3e-5790.98putative pentatricopeptide repeat-containing protein At1g09680 OS=Cucumis melo O... [more]
tr|M5XHR3|M5XHR3_PRUPE1.2e-4567.15Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G166000 PE=4 SV=1[more]
tr|A0A1Q3AY41|A0A1Q3AY41_CEPFO2.8e-4262.77PPR domain-containing protein/PPR_1 domain-containing protein/PPR_2 domain-conta... [more]
tr|A0A0B0N0W6|A0A0B0N0W6_GOSAR2.2e-3960.58Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_25233 PE=4 SV=1[more]
BLAST of Bhi01G001315 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023526542.12.0e-6389.05putative pentatricopeptide repeat-containing protein At1g09680 [Cucurbita pepo s... [more]
XP_022934877.15.7e-6388.32putative pentatricopeptide repeat-containing protein At1g09680 [Cucurbita moscha... [more]
XP_022983327.17.5e-6387.59putative pentatricopeptide repeat-containing protein At1g09680 [Cucurbita maxima... [more]
KGN57460.11.9e-5886.82hypothetical protein Csa_3G188330 [Cucumis sativus][more]
XP_004140820.21.9e-5886.82PREDICTED: putative pentatricopeptide repeat-containing protein At1g09680 [Cucum... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M001315Bhi01M001315mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 249..318
e-value: 1.7E-25
score: 91.6
coord: 319..390
e-value: 2.2E-21
score: 78.2
coord: 179..248
e-value: 1.0E-25
score: 92.3
coord: 87..178
e-value: 2.4E-18
score: 68.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 391..482
e-value: 3.8E-21
score: 77.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 17..313
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 216..248
e-value: 1.2E-9
score: 37.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 326..374
e-value: 7.2E-16
score: 58.0
coord: 150..199
e-value: 4.3E-17
score: 61.9
coord: 255..304
e-value: 2.9E-19
score: 68.9
coord: 395..444
e-value: 6.9E-17
score: 61.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 49..77
e-value: 0.75
score: 10.1
coord: 120..148
e-value: 5.8E-4
score: 19.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 364..396
e-value: 2.6E-9
score: 34.7
coord: 153..187
e-value: 3.9E-8
score: 31.0
coord: 258..291
e-value: 3.6E-10
score: 37.4
coord: 433..456
e-value: 1.3E-4
score: 19.9
coord: 398..431
e-value: 1.4E-7
score: 29.3
coord: 188..221
e-value: 1.6E-12
score: 44.8
coord: 328..361
e-value: 8.7E-9
score: 33.0
coord: 120..151
e-value: 6.2E-6
score: 24.1
coord: 223..256
e-value: 3.8E-8
score: 31.0
coord: 293..326
e-value: 9.0E-9
score: 33.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 116..150
score: 10.698
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 361..395
score: 12.551
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 431..461
score: 7.651
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 221..255
score: 12.474
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 81..115
score: 5.108
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 46..80
score: 7.859
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 256..290
score: 13.548
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 151..185
score: 11.301
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 396..430
score: 11.904
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 186..220
score: 15.795
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 326..360
score: 12.912
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 291..325
score: 12.496
NoneNo IPR availablePANTHERPTHR24015:SF923SUBFAMILY NOT NAMEDcoord: 1..484
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..484