MELO3C028587.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C028587.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPumilio-like protein
Locationchr01 : 714942 .. 716782 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTTAATGAAAGATAACGATAATCCAATGATTTCTAATGACGACGCTAATGATAGCGATATTAACGATAATCGTCACTTGTTCAGTGTTCTTCAACAACTTACAACAACACATCTTCATTGGGTGATTATTCATCCACTTGGAAATAAGTTTCTTCTGCATCTTCTTCAACCTCCTCATTGCCATCCAACCTTCATTAATCATCTTCTTCTCTCCTTAACCACTTATTCACGAGACCACTTTCTACCTATCTCTCTTCATTATCTCGGGTTAGTTCTTCATATATATTACTTAATTCTTTTTTATTATTTTCATTTGTAATTAATTCTCCGATGCATATCTAATTGATTCGTTAATCTTCGTCGTTAATCTTTTTGTACTATTATACAGATATCGAGTTGTGGTGACGTTAATCTCTCATCTCAAATACCCTTGTCAACAATGGATGATTGCATTGTTGATGAGTCCGCATGTACTGACTTTGGCTAAAGACTTTCAAGGTGGTCATCGAGTGATAAAGAGTTGCTTCCAAAGCTTTTCCCCACAACCTAATGAGGTAATGAGTCTTTATAATCAATTAAAATCATTGAAAGAAAGAAACAATAAGGGGATCTATATATATACTATCACATGAATGCAGTTGATCTTACTCAGAGTAGCACAAAATTGCTTGGAGTTGGCGAGAGAACAAGCCGGTTGTTGTATACTCCAAGAGTGCATTGAATATTCCAATAATAACTTCAGACAACTTCGAGAAGTTCTAATCACTCCGTTGATAGAAGATGCATATGATCTTTCAAAACATCCTTATGGGTAATTTCATTTCATTATCTTATATGCATGCATAGCTAGGGTTATTGTTTGAATTAATTATTGATTATATGTTAAGTGTTAATTGCAGGAACTATGTTATCCAATTTATGATTCAATTAGATGGAACAAACATAGGATGGAGAGTAATCAAAGAGCTTACACACAAATTTGTAGAACTTTCCATGGACAAGTATGGAAGCAATGTAGTGGAAAAGTGTGTCTGTCTTGTTGTGAAGATATCTCTAACTATGACATTATCTTTGAAATTTTGGAGGGTAACCATCGAGATCGATTCATCCAAATTTGTACAAATCAATATGGGAATTATGTTGTCCAAAAAGCCATGTCTATTGCTAAGGTTTGTTTTTAATTTTCCTCCTTAATTAATATATTCCTTTTCATTTTAATCTAAGAATTAGTGTAATCACAAAAGGTTAACTTATTCCTTAAAAATATTATATACTCGCTCGTTGTGTTTAATGTATAACAACGTAACTATATTTATTGAGAATGTCAAACATAAAGCCAACGGTACACATTGTTGCTAGATATAAGGGGAAAGGTCAACTAATAGAACGAGAGCATATGATCTCACCTCAAGTGAAAAGACAATATTGTATCATTACCTTTCATCGTCAAGATGTTTAAAGAATAATCATTACTCGTCCCTGACAATGTTTTTTTTACATCACAGGGAAGAATTCGTAAGTTGCTTGAAAAAGCCATTAAGCGTCACTGGCTTGTTCTTCAATGTCGTCCATATAGAAGAAATGTAATTTAATTTCATCAACTAAACGTGATAGAAGTCCAAATTATCGGAAGTACTTTTAAAGTAGGAATAGTTTTAGGAATATATTATATACATATAGATTGTTTTTATATATCTATATGTTTGAAGGTTGTTTGGAGTACACATATAATAATTAGCAAAAACAATGCTTATTGGGAAATGTTATTTGTATAGATGTGAGTATGTGAACTATGATTTATTCCTTAGGTTAGGCATATCATTGTTAAAGAATATT

mRNA sequence

ATGTTGTTAATGAAAGATAACGATAATCCAATGATTTCTAATGACGACGCTAATGATAGCGATATTAACGATAATCGTCACTTGTTCAGTGTTCTTCAACAACTTACAACAACACATCTTCATTGGGTGATTATTCATCCACTTGGAAATAAGTTTCTTCTGCATCTTCTTCAACCTCCTCATTGCCATCCAACCTTCATTAATCATCTTCTTCTCTCCTTAACCACTTATTCACGAGACCACTTTCTACCTATCTCTCTTCATTATCTCGGATATCGAGTTGTGGTGACGTTAATCTCTCATCTCAAATACCCTTGTCAACAATGGATGATTGCATTGTTGATGAGTCCGCATGTACTGACTTTGGCTAAAGACTTTCAAGGTGGTCATCGAGTGATAAAGAGTTGCTTCCAAAGCTTTTCCCCACAACCTAATGAGTTGATCTTACTCAGAGTAGCACAAAATTGCTTGGAGTTGGCGAGAGAACAAGCCGGTTGTTGTATACTCCAAGAGTGCATTGAATATTCCAATAATAACTTCAGACAACTTCGAGAAGTTCTAATCACTCCGTTGATAGAAGATGCATATGATCTTTCAAAACATCCTTATGGGAACTATGTTATCCAATTTATGATTCAATTAGATGGAACAAACATAGGATGGAGAGTAATCAAAGAGCTTACACACAAATTTGTAGAACTTTCCATGGACAAGTATGGAAGCAATGTAGTGGAAAAGTGTGTCTGTCTTGTTGTGAAGATATCTCTAACTATGACATTATCTTTGAAATTTTGGAGGGTAACCATCGAGATCGATTCATCCAAATTTGTACAAATCAATATGGGAATTATGTTGTCCAAAAAGCCATGTCTATTGCTAAGGGAAGAATTCGTAAGTTGCTTGAAAAAGCCATTAAGCGTCACTGGCTTGTTCTTCAATGTCGTCCATATAGAAGAAATGTAATTTAATTTCATCAACTAAACGTGATAGAAGTCCAAATTATCGGAAGTACTTTTAAAGTAGGAATAGTTTTAGGAATATATTATATACATATAGATTGTTTTTATATATCTATATGTTTGAAGGTTGTTTGGAGTACACATATAATAATTAGCAAAAACAATGCTTATTGGGAAATGTTATTTGTATAGATGTGAGTATGTGAACTATGATTTATTCCTTAGGTTAGGCATATCATTGTTAAAGAATATT

Coding sequence (CDS)

ATGTTGTTAATGAAAGATAACGATAATCCAATGATTTCTAATGACGACGCTAATGATAGCGATATTAACGATAATCGTCACTTGTTCAGTGTTCTTCAACAACTTACAACAACACATCTTCATTGGGTGATTATTCATCCACTTGGAAATAAGTTTCTTCTGCATCTTCTTCAACCTCCTCATTGCCATCCAACCTTCATTAATCATCTTCTTCTCTCCTTAACCACTTATTCACGAGACCACTTTCTACCTATCTCTCTTCATTATCTCGGATATCGAGTTGTGGTGACGTTAATCTCTCATCTCAAATACCCTTGTCAACAATGGATGATTGCATTGTTGATGAGTCCGCATGTACTGACTTTGGCTAAAGACTTTCAAGGTGGTCATCGAGTGATAAAGAGTTGCTTCCAAAGCTTTTCCCCACAACCTAATGAGTTGATCTTACTCAGAGTAGCACAAAATTGCTTGGAGTTGGCGAGAGAACAAGCCGGTTGTTGTATACTCCAAGAGTGCATTGAATATTCCAATAATAACTTCAGACAACTTCGAGAAGTTCTAATCACTCCGTTGATAGAAGATGCATATGATCTTTCAAAACATCCTTATGGGAACTATGTTATCCAATTTATGATTCAATTAGATGGAACAAACATAGGATGGAGAGTAATCAAAGAGCTTACACACAAATTTGTAGAACTTTCCATGGACAAGTATGGAAGCAATGTAGTGGAAAAGTGTGTCTGTCTTGTTGTGAAGATATCTCTAACTATGACATTATCTTTGAAATTTTGGAGGGTAACCATCGAGATCGATTCATCCAAATTTGTACAAATCAATATGGGAATTATGTTGTCCAAAAAGCCATGTCTATTGCTAAGGGAAGAATTCGTAAGTTGCTTGAAAAAGCCATTAAGCGTCACTGGCTTGTTCTTCAATGTCGTCCATATAGAAGAAATGTAA

Protein sequence

MLLMKDNDNPMISNDDANDSDINDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYGSNVVEKCVCLVVKISLTMTLSLKFWRVTIEIDSSKFVQINMGIMLSKKPCLLLREEFVSCLKKPLSVTGLFFNVVHIEEM
Homology
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BLAST of MELO3C028587.2 vs. NCBI nr
Match: XP_008455521.1 (PREDICTED: putative pumilio homolog 8, chloroplastic [Cucumis melo])

HSP 1 Score: 651.4 bits (1679), Expect = 1.6e-183
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0 

Query: 1   MLLMKDNDNPMISNDDANDSDINDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPP 60
           MLLMKDNDNPMISNDDANDSDINDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPP
Sbjct: 1   MLLMKDNDNPMISNDDANDSDINDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPP 60

Query: 61  HCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVL 120
           HCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVL
Sbjct: 61  HCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVL 120

Query: 121 TLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNF 180
           TLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNF
Sbjct: 121 TLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNF 180

Query: 181 RQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYG 240
           RQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYG
Sbjct: 181 RQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYG 240

Query: 241 SNVVEKCVCLVVKISLTMTLSLKFWRVTIEIDSSKFVQINMGIMLSKKPCLLLREEFVSC 300
           SNVVEKCVCLVVKISLTMTLSLKFWRVTIEIDSSKFVQINMGIMLSKKPCLLLREEFVSC
Sbjct: 241 SNVVEKCVCLVVKISLTMTLSLKFWRVTIEIDSSKFVQINMGIMLSKKPCLLLREEFVSC 300

Query: 301 LKKPLSVTGLFFNVVHIEEM 321
           LKKPLSVTGLFFNVVHIEEM
Sbjct: 301 LKKPLSVTGLFFNVVHIEEM 320

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BLAST of MELO3C028587.2 vs. NCBI nr
Match: KGN43866.1 (hypothetical protein Csa_7G071550 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 2.1e-45
Identity = 93/110 (84.55%), Postives = 100/110 (90.91%), Query Frame = 0 

Query: 146 ELILLRVAQNCLELAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGN 205
           +LI+LRVAQNCLELAR QA CCILQECIEYSNNN RQL+EVLI+PLI+D YDLSKHPYGN
Sbjct: 2   QLIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDLSKHPYGN 61

Query: 206 YVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYGSNVVEKCVCLVVKIS 256
           YVIQFMIQLDGTNIG R+IKELTHKFVELSMDKYGSNVVEKC+     IS
Sbjct: 62  YVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGIS 111

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BLAST of MELO3C028587.2 vs. NCBI nr
Match: XP_022148742.1 (pumilio homolog 12-like [Momordica charantia])

HSP 1 Score: 183.3 bits (464), Expect = 1.3e-42
Identity = 102/209 (48.80%), Postives = 138/209 (66.03%), Query Frame = 0 

Query: 40  LHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLI 99
           +H +++HPLGN  +  L +   CH  FI  LLLSL    +D FL + LH LG + VV L+
Sbjct: 152 IHELMLHPLGNDVVQTLFR--FCHEYFIKDLLLSLIG-KQDLFLAVCLHSLGQKAVVKLL 211

Query: 100 SHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLEL 159
             L  P  Q + A+++S H + LAK    GH V+ +CF++ S Q NE+ILL +A N LEL
Sbjct: 212 CRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLEL 271

Query: 160 AREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNI 219
           A+++ GCCIL  CI Y+      LR VL+TPLI++A  LS H Y N+VIQF+I+LD  NI
Sbjct: 272 AKDKNGCCILPFCILYAEGT---LRGVLVTPLIQEARHLSTHFYANFVIQFLIELDQANI 331

Query: 220 GWRVIKELTHKFVELSMDKYGSNVVEKCV 249
           G RVI+ L +KFVEL + K GS+VVEKC+
Sbjct: 332 GARVIQVLRNKFVELCLSKAGSHVVEKCL 354

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BLAST of MELO3C028587.2 vs. NCBI nr
Match: XP_017246437.1 (PREDICTED: pumilio homolog 12-like [Daucus carota subsp. sativus] >KZM99832.1 hypothetical protein DCAR_012806 [Daucus carota subsp. sativus])

HSP 1 Score: 130.2 bits (326), Expect = 1.3e-26
Identity = 73/200 (36.50%), Postives = 116/200 (58.00%), Query Frame = 0 

Query: 49  GNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQ 108
           GN F+  L+    C+      ++LS+T  S  HF+ +  +  G R + TL+ H+  P Q 
Sbjct: 220 GNNFVKKLI--GSCNEDQRTMIILSVTK-SVFHFISVCCNPHGTRGIQTLMEHVSSPHQV 279

Query: 109 WMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCI 168
            ++   +SP    LA+D   GH VI+ C   FS + N  I+  +A NC E+A  + GCC+
Sbjct: 280 SLLVAAISPSAAILARD-TNGHHVIQHCLTHFSNEYNLYIINNIASNCFEVATSKTGCCV 339

Query: 169 LQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELT 228
           +Q C+E S    RQ   VL++ +I  A  L++HP+GNYV+Q ++ L   +I   ++++L 
Sbjct: 340 MQLCVEKSLGVHRQ---VLVSEIIATAVHLAEHPFGNYVLQHLLGLKEPDITGSIVRQLQ 399

Query: 229 HKFVELSMDKYGSNVVEKCV 249
             F+ +S +KYGSNVVEKC+
Sbjct: 400 GSFLSISCNKYGSNVVEKCL 412

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BLAST of MELO3C028587.2 vs. NCBI nr
Match: XP_015866393.2 (pumilio homolog 12-like [Ziziphus jujuba])

HSP 1 Score: 128.3 bits (321), Expect = 4.8e-26
Identity = 77/215 (35.81%), Postives = 127/215 (59.07%), Query Frame = 0 

Query: 39  HLHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTL 98
           +LH +++   GN  +  L++  + +   ++ +L+S+ + +   F  + +   G RVV  L
Sbjct: 67  NLHDLMVQQFGNYLIQKLIEVVNANQ--LSEILVSVIS-NEQRFKEVCIDEHGTRVVQKL 126

Query: 99  ISHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLE 158
           + +LK P QQ++    +S   + L K   G H VI+ CF   SP+ N+ +L  VA NCLE
Sbjct: 127 LGYLKVPEQQFLAMSAVSRITVALTKSSNGNH-VIQKCFAELSPEVNKPLLDEVAANCLE 186

Query: 159 LAREQAGCCILQECIEYS-----NNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQ 218
           +A +++GCCILQ C+ Y+          + ++ L+  +I +A  LS+HPYGNYV+Q +I 
Sbjct: 187 IATDKSGCCILQTCVSYACAAHHAPQTGEAKKRLLAEIISNAQILSEHPYGNYVVQLII- 246

Query: 219 LDGTNIGWRVIKELTHKFVELSMDKYGSNVVEKCV 249
             GT     ++ +L  K+V LSM+K+GSNVVEKC+
Sbjct: 247 APGTLPD--ILTQLRGKYVSLSMNKHGSNVVEKCL 274

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BLAST of MELO3C028587.2 vs. TAIR10
Match: AT1G22240.1 (pumilio 8)

HSP 1 Score: 115.2 bits (287), Expect = 7.7e-26
Identity = 68/210 (32.38%), Postives = 116/210 (55.24%), Query Frame = 0 

Query: 39  HLHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTL 98
           H+  +++ P GN  +  LL    C+      ++L +T+      + ISL+  G RVV  L
Sbjct: 238 HVVELMMDPFGNYLMQKLLDV--CNEEQRTQIILMVTS-EPGQLIRISLNAYGTRVVQRL 297

Query: 99  ISHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLE 158
           +  +K   Q  ++   + P  L L +D  G H VI+ C Q  S + NE I     + C++
Sbjct: 298 VESIKTRKQISLVKSALRPGFLNLIRDLNGNH-VIQRCLQCLSTEDNEFIFEDATKFCID 357

Query: 159 LAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTN 218
           +A  + GCC+LQ+CI YS+      RE L+T +  ++  L++ PYGNY +QF+++L   +
Sbjct: 358 IATHRHGCCVLQKCIAYSSG---LQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFS 417

Query: 219 IGWRVIKELTHKFVELSMDKYGSNVVEKCV 249
               ++ +L   +VELSM K+ S++VE+C+
Sbjct: 418 AIAAMLAQLKGHYVELSMQKFSSHMVERCL 440

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BLAST of MELO3C028587.2 vs. TAIR10
Match: AT1G78160.1 (pumilio 7)

HSP 1 Score: 112.5 bits (280), Expect = 5.0e-25
Identity = 70/210 (33.33%), Postives = 114/210 (54.29%), Query Frame = 0 

Query: 39  HLHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTL 98
           H+  +++ P GN  +  LL    C       ++L + T      + ISL+  G RVV  L
Sbjct: 373 HVVELMMDPFGNYLMQKLLDV--CTEEQRTQIVL-VATEEPGQLIRISLNAYGTRVVQRL 432

Query: 99  ISHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLE 158
           +  ++   Q  ++ L + P  L L KD  G H VI+ C Q  S + N+ I     + C E
Sbjct: 433 VETIRSGKQISLVKLALRPGFLDLIKDLNGNH-VIQRCLQCLSTEDNKFIFDAATKFCTE 492

Query: 159 LAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTN 218
           +A  + GCC+LQ+CI YS    RQ RE LI  +  ++  L++ P+GNY +QF+I+L   +
Sbjct: 493 IATHRHGCCVLQKCIAYS---MRQQREKLIAEISRNSLLLAQDPFGNYAVQFVIELRIPS 552

Query: 219 IGWRVIKELTHKFVELSMDKYGSNVVEKCV 249
               ++ +L   +V+LSM K+ S++VE+C+
Sbjct: 553 AVAMMLAQLKGHYVQLSMQKFSSHMVERCL 575

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BLAST of MELO3C028587.2 vs. TAIR10
Match: AT1G35730.1 (pumilio 9)

HSP 1 Score: 105.1 bits (261), Expect = 7.9e-23
Identity = 59/179 (32.96%), Postives = 100/179 (55.87%), Query Frame = 0 

Query: 70  LLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVLTLAKDFQGG 129
           L++S+ T +    + I L+  G RVV  +I  +K   Q  ++   + P  L L KD  G 
Sbjct: 317 LIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPGFLALVKDLNGN 376

Query: 130 HRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNFRQLREVLIT 189
           H VI+SC Q+  P  NE +L    + C E+A  + GCC+LQ CI   +N+    RE L+ 
Sbjct: 377 H-VIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCI---SNSVGLQRERLVA 436

Query: 190 PLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYGSNVVEKCV 249
            +  ++  LS+ P+GNYV+Q++I    + +  +++ +    + EL+  K+ S+V+EKC+
Sbjct: 437 EISRNSLHLSQDPFGNYVVQYLIDQQVSAV--KLLVQFRMHYAELATQKFSSHVIEKCL 489

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BLAST of MELO3C028587.2 vs. TAIR10
Match: AT4G08840.1 (pumilio 11)

HSP 1 Score: 104.4 bits (259), Expect = 1.4e-22
Identity = 66/204 (32.35%), Postives = 113/204 (55.39%), Query Frame = 0 

Query: 47  PLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPC 106
           P GN  +  L++   C+      +L+ LT+      + IS++  G RVV  LI  +    
Sbjct: 289 PFGNYLIQKLIEV--CNEEQRTQILIRLTS-KPGLLVKISINNYGTRVVQKLIETVTTKE 348

Query: 107 QQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGC 166
           Q  ++   + P  L+L ++  G H VI +C + FSP  N+ IL    + C+E+A  + GC
Sbjct: 349 QISLVKSALVPGFLSLFRELNGNH-VILNCLKFFSPNDNKFILEAATKFCIEIATTRHGC 408

Query: 167 CILQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQ--LDGTNIGWRVI 226
           C+LQ C+ YS     +  E L+  +  ++  L++ P+GNY++Q++I+  + G N    V+
Sbjct: 409 CVLQRCVSYS---VGEQHEKLVDEISRNSLLLAQDPFGNYLVQYIIEKKVGGVN----VL 468

Query: 227 KELTHKFVELSMDKYGSNVVEKCV 249
            EL   +V+L+  K+GS+VVEKC+
Sbjct: 469 FELRGNYVKLATQKFGSHVVEKCL 481

[Close]
BLAST of MELO3C028587.2 vs. TAIR10
Match: AT5G56510.1 (pumilio 12)

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-19
Identity = 64/233 (27.47%), Postives = 120/233 (51.50%), Query Frame = 0 

Query: 18  NDSDINDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTY 77
           ++ D ND   +F+ +      ++  +++ P GN  +  LL+   C+      ++ S+T  
Sbjct: 300 SEKDGNDIEMIFNEI----IDYISELMMDPFGNYLVQKLLEV--CNEDQRMQIVHSITR- 359

Query: 78  SRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCF 137
                + IS    G R V  ++   K   +  +I   +   ++ L K+  G H V++ C 
Sbjct: 360 KPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKHGIVHLIKNVNGNH-VVQRCL 419

Query: 138 QSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYD 197
           Q   P   + +      +C+ELA ++ GCC+LQ+C+ YS     + ++ L++ +  +A  
Sbjct: 420 QYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEG---EQKQHLVSEIASNALL 479

Query: 198 LSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYGSNVVEKCVCL 251
           LS+ P+GNYV+Q++ +L      + ++++L   + ELSM K  SNVVEKC+ L
Sbjct: 480 LSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSNVVEKCLKL 521

[Close]
BLAST of MELO3C028587.2 vs. Swiss-Prot
Match: sp|Q9LM20|PUM8_ARATH (Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APUM8 PE=3 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-24
Identity = 68/210 (32.38%), Postives = 116/210 (55.24%), Query Frame = 0 

Query: 39  HLHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTL 98
           H+  +++ P GN  +  LL    C+      ++L +T+      + ISL+  G RVV  L
Sbjct: 238 HVVELMMDPFGNYLMQKLLDV--CNEEQRTQIILMVTS-EPGQLIRISLNAYGTRVVQRL 297

Query: 99  ISHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLE 158
           +  +K   Q  ++   + P  L L +D  G H VI+ C Q  S + NE I     + C++
Sbjct: 298 VESIKTRKQISLVKSALRPGFLNLIRDLNGNH-VIQRCLQCLSTEDNEFIFEDATKFCID 357

Query: 159 LAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTN 218
           +A  + GCC+LQ+CI YS+      RE L+T +  ++  L++ PYGNY +QF+++L   +
Sbjct: 358 IATHRHGCCVLQKCIAYSSG---LQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFS 417

Query: 219 IGWRVIKELTHKFVELSMDKYGSNVVEKCV 249
               ++ +L   +VELSM K+ S++VE+C+
Sbjct: 418 AIAAMLAQLKGHYVELSMQKFSSHMVERCL 440

[Close]
BLAST of MELO3C028587.2 vs. Swiss-Prot
Match: sp|Q9C9R6|PUM7_ARATH (Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APUM7 PE=3 SV=2)

HSP 1 Score: 112.5 bits (280), Expect = 8.9e-24
Identity = 70/210 (33.33%), Postives = 114/210 (54.29%), Query Frame = 0 

Query: 39  HLHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTL 98
           H+  +++ P GN  +  LL    C       ++L + T      + ISL+  G RVV  L
Sbjct: 373 HVVELMMDPFGNYLMQKLLDV--CTEEQRTQIVL-VATEEPGQLIRISLNAYGTRVVQRL 432

Query: 99  ISHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLE 158
           +  ++   Q  ++ L + P  L L KD  G H VI+ C Q  S + N+ I     + C E
Sbjct: 433 VETIRSGKQISLVKLALRPGFLDLIKDLNGNH-VIQRCLQCLSTEDNKFIFDAATKFCTE 492

Query: 159 LAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTN 218
           +A  + GCC+LQ+CI YS    RQ RE LI  +  ++  L++ P+GNY +QF+I+L   +
Sbjct: 493 IATHRHGCCVLQKCIAYS---MRQQREKLIAEISRNSLLLAQDPFGNYAVQFVIELRIPS 552

Query: 219 IGWRVIKELTHKFVELSMDKYGSNVVEKCV 249
               ++ +L   +V+LSM K+ S++VE+C+
Sbjct: 553 AVAMMLAQLKGHYVQLSMQKFSSHMVERCL 575

[Close]
BLAST of MELO3C028587.2 vs. Swiss-Prot
Match: sp|Q1PFN9|PUM9_ARATH (Pumilio homolog 9 OS=Arabidopsis thaliana OX=3702 GN=APUM9 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-21
Identity = 59/179 (32.96%), Postives = 100/179 (55.87%), Query Frame = 0 

Query: 70  LLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVLTLAKDFQGG 129
           L++S+ T +    + I L+  G RVV  +I  +K   Q  ++   + P  L L KD  G 
Sbjct: 317 LIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPGFLALVKDLNGN 376

Query: 130 HRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNFRQLREVLIT 189
           H VI+SC Q+  P  NE +L    + C E+A  + GCC+LQ CI   +N+    RE L+ 
Sbjct: 377 H-VIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCI---SNSVGLQRERLVA 436

Query: 190 PLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYGSNVVEKCV 249
            +  ++  LS+ P+GNYV+Q++I    + +  +++ +    + EL+  K+ S+V+EKC+
Sbjct: 437 EISRNSLHLSQDPFGNYVVQYLIDQQVSAV--KLLVQFRMHYAELATQKFSSHVIEKCL 489

[Close]
BLAST of MELO3C028587.2 vs. Swiss-Prot
Match: sp|Q9LDW3|PUM11_ARATH (Pumilio homolog 11 OS=Arabidopsis thaliana OX=3702 GN=APUM11 PE=3 SV=2)

HSP 1 Score: 104.4 bits (259), Expect = 2.4e-21
Identity = 66/204 (32.35%), Postives = 113/204 (55.39%), Query Frame = 0 

Query: 47  PLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPC 106
           P GN  +  L++   C+      +L+ LT+      + IS++  G RVV  LI  +    
Sbjct: 289 PFGNYLIQKLIEV--CNEEQRTQILIRLTS-KPGLLVKISINNYGTRVVQKLIETVTTKE 348

Query: 107 QQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGC 166
           Q  ++   + P  L+L ++  G H VI +C + FSP  N+ IL    + C+E+A  + GC
Sbjct: 349 QISLVKSALVPGFLSLFRELNGNH-VILNCLKFFSPNDNKFILEAATKFCIEIATTRHGC 408

Query: 167 CILQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQ--LDGTNIGWRVI 226
           C+LQ C+ YS     +  E L+  +  ++  L++ P+GNY++Q++I+  + G N    V+
Sbjct: 409 CVLQRCVSYS---VGEQHEKLVDEISRNSLLLAQDPFGNYLVQYIIEKKVGGVN----VL 468

Query: 227 KELTHKFVELSMDKYGSNVVEKCV 249
            EL   +V+L+  K+GS+VVEKC+
Sbjct: 469 FELRGNYVKLATQKFGSHVVEKCL 481

[Close]
BLAST of MELO3C028587.2 vs. Swiss-Prot
Match: sp|Q9LVC3|PUM12_ARATH (Pumilio homolog 12 OS=Arabidopsis thaliana OX=3702 GN=APUM12 PE=2 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 2.5e-18
Identity = 64/233 (27.47%), Postives = 120/233 (51.50%), Query Frame = 0 

Query: 18  NDSDINDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTY 77
           ++ D ND   +F+ +      ++  +++ P GN  +  LL+   C+      ++ S+T  
Sbjct: 300 SEKDGNDIEMIFNEI----IDYISELMMDPFGNYLVQKLLEV--CNEDQRMQIVHSITR- 359

Query: 78  SRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCF 137
                + IS    G R V  ++   K   +  +I   +   ++ L K+  G H V++ C 
Sbjct: 360 KPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKHGIVHLIKNVNGNH-VVQRCL 419

Query: 138 QSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYD 197
           Q   P   + +      +C+ELA ++ GCC+LQ+C+ YS     + ++ L++ +  +A  
Sbjct: 420 QYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEG---EQKQHLVSEIASNALL 479

Query: 198 LSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYGSNVVEKCVCL 251
           LS+ P+GNYV+Q++ +L      + ++++L   + ELSM K  SNVVEKC+ L
Sbjct: 480 LSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSNVVEKCLKL 521

[Close]
BLAST of MELO3C028587.2 vs. TrEMBL
Match: tr|A0A1S3C139|A0A1S3C139_CUCME (putative pumilio homolog 8, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495672 PE=4 SV=1)

HSP 1 Score: 651.4 bits (1679), Expect = 1.1e-183
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0 

Query: 1   MLLMKDNDNPMISNDDANDSDINDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPP 60
           MLLMKDNDNPMISNDDANDSDINDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPP
Sbjct: 1   MLLMKDNDNPMISNDDANDSDINDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPP 60

Query: 61  HCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVL 120
           HCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVL
Sbjct: 61  HCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVL 120

Query: 121 TLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNF 180
           TLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNF
Sbjct: 121 TLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNF 180

Query: 181 RQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYG 240
           RQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYG
Sbjct: 181 RQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYG 240

Query: 241 SNVVEKCVCLVVKISLTMTLSLKFWRVTIEIDSSKFVQINMGIMLSKKPCLLLREEFVSC 300
           SNVVEKCVCLVVKISLTMTLSLKFWRVTIEIDSSKFVQINMGIMLSKKPCLLLREEFVSC
Sbjct: 241 SNVVEKCVCLVVKISLTMTLSLKFWRVTIEIDSSKFVQINMGIMLSKKPCLLLREEFVSC 300

Query: 301 LKKPLSVTGLFFNVVHIEEM 321
           LKKPLSVTGLFFNVVHIEEM
Sbjct: 301 LKKPLSVTGLFFNVVHIEEM 320

[Close]
BLAST of MELO3C028587.2 vs. TrEMBL
Match: tr|A0A0A0K7S4|A0A0A0K7S4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071550 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.4e-45
Identity = 93/110 (84.55%), Postives = 100/110 (90.91%), Query Frame = 0 

Query: 146 ELILLRVAQNCLELAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGN 205
           +LI+LRVAQNCLELAR QA CCILQECIEYSNNN RQL+EVLI+PLI+D YDLSKHPYGN
Sbjct: 2   QLIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDLSKHPYGN 61

Query: 206 YVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYGSNVVEKCVCLVVKIS 256
           YVIQFMIQLDGTNIG R+IKELTHKFVELSMDKYGSNVVEKC+     IS
Sbjct: 62  YVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGIS 111

[Close]
BLAST of MELO3C028587.2 vs. TrEMBL
Match: tr|A0A162AE57|A0A162AE57_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_012806 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 8.4e-27
Identity = 73/200 (36.50%), Postives = 116/200 (58.00%), Query Frame = 0 

Query: 49  GNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQ 108
           GN F+  L+    C+      ++LS+T  S  HF+ +  +  G R + TL+ H+  P Q 
Sbjct: 220 GNNFVKKLI--GSCNEDQRTMIILSVTK-SVFHFISVCCNPHGTRGIQTLMEHVSSPHQV 279

Query: 109 WMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCI 168
            ++   +SP    LA+D   GH VI+ C   FS + N  I+  +A NC E+A  + GCC+
Sbjct: 280 SLLVAAISPSAAILARD-TNGHHVIQHCLTHFSNEYNLYIINNIASNCFEVATSKTGCCV 339

Query: 169 LQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELT 228
           +Q C+E S    RQ   VL++ +I  A  L++HP+GNYV+Q ++ L   +I   ++++L 
Sbjct: 340 MQLCVEKSLGVHRQ---VLVSEIIATAVHLAEHPFGNYVLQHLLGLKEPDITGSIVRQLQ 399

Query: 229 HKFVELSMDKYGSNVVEKCV 249
             F+ +S +KYGSNVVEKC+
Sbjct: 400 GSFLSISCNKYGSNVVEKCL 412

[Close]
BLAST of MELO3C028587.2 vs. TrEMBL
Match: tr|A0A1R3HUF5|A0A1R3HUF5_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_17055 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 6.0e-25
Identity = 70/228 (30.70%), Postives = 129/228 (56.58%), Query Frame = 0 

Query: 22  INDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDH 81
           +ND + +  +  ++    LH +++H   N  +  L +  + +      LL+ L   +   
Sbjct: 210 VNDEKEIDMIFSEV-KDQLHELMVHQFANFLIQKLFEAGNQNQR--TELLVWLVK-NEQS 269

Query: 82  FLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFS 141
           F+ +  H  G R V  ++  +  P Q  ++  ++ P  + L K+   GH +I+ C Q FS
Sbjct: 270 FMDVCTHSTGTRAVQKIMEWISIPNQISILLSVLKPAAVALTKNAH-GHHIIERCLQIFS 329

Query: 142 PQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYDLSKH 201
            +  E ++  + ++CLE+A +++GCC+LQ+C+  S     + +E L+  +  +A+ LS+H
Sbjct: 330 IEEAEPLVDEIVEHCLEIATDKSGCCVLQQCLARSK---EEAKERLLVDITANAFVLSEH 389

Query: 202 PYGNYVIQFMIQL-DGTNIGWRVIKELTHKFVELSMDKYGSNVVEKCV 249
           PYGNYV+QF++ L +  ++   +I +L   +V LSM+KYGSNVVEKC+
Sbjct: 390 PYGNYVVQFVLGLREVPHVRANIIVQLRGSYVTLSMNKYGSNVVEKCL 429

[Close]
BLAST of MELO3C028587.2 vs. TrEMBL
Match: tr|A0A1R3GYZ0|A0A1R3GYZ0_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_32563 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 2.3e-24
Identity = 69/228 (30.26%), Postives = 129/228 (56.58%), Query Frame = 0 

Query: 22  INDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDH 81
           +ND + +  +  ++    LH +++H   N  +  L +  + +      LL+ L   +   
Sbjct: 212 VNDEKEIDMIFSEV-KDQLHELMVHQFANFLIQKLFEAGNENQR--TELLVWLVK-NEQS 271

Query: 82  FLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFS 141
           F+ +  H  G R V  ++  +  P Q  ++  ++ P  + L K+   GH +I+ C Q FS
Sbjct: 272 FMDVCTHSTGTRAVQKIMEWISTPDQIAILLSVLKPAAVALTKNAH-GHHIIERCLQIFS 331

Query: 142 PQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYDLSKH 201
            +  E ++  + ++CLE+A +++GCC+LQ+C+  +     + +E L+  +  +A+ LS+H
Sbjct: 332 IEEAEPLVDEIVEHCLEIATDKSGCCVLQQCLARTK---EEAKERLLVDITTNAFVLSEH 391

Query: 202 PYGNYVIQFMIQL-DGTNIGWRVIKELTHKFVELSMDKYGSNVVEKCV 249
           PYGNYV+QF++ L +  ++   +I +L   +V LSM+KYGSNVVEKC+
Sbjct: 392 PYGNYVVQFVLGLREVPHVRANIIVQLRGSYVTLSMNKYGSNVVEKCL 431

The following BLAST results are available for this feature:
BLAST of MELO3C028587.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455521.11.6e-183100.00PREDICTED: putative pumilio homolog 8, chloroplastic [Cucumis melo][more]
KGN43866.12.1e-4584.55hypothetical protein Csa_7G071550 [Cucumis sativus][more]
XP_022148742.11.3e-4248.80pumilio homolog 12-like [Momordica charantia][more]
XP_017246437.11.3e-2636.50PREDICTED: pumilio homolog 12-like [Daucus carota subsp. sativus] >KZM99832.1 hy... [more]
XP_015866393.24.8e-2635.81pumilio homolog 12-like [Ziziphus jujuba][more]
BLAST of MELO3C028587.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G22240.17.7e-2632.38pumilio 8[more]
AT1G78160.15.0e-2533.33pumilio 7[more]
AT1G35730.17.9e-2332.96pumilio 9[more]
AT4G08840.11.4e-2232.35pumilio 11[more]
AT5G56510.11.4e-1927.47pumilio 12[more]
BLAST of MELO3C028587.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LM20|PUM8_ARATH1.4e-2432.38Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APU... [more]
sp|Q9C9R6|PUM7_ARATH8.9e-2433.33Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APU... [more]
sp|Q1PFN9|PUM9_ARATH1.4e-2132.96Pumilio homolog 9 OS=Arabidopsis thaliana OX=3702 GN=APUM9 PE=2 SV=1[more]
sp|Q9LDW3|PUM11_ARATH2.4e-2132.35Pumilio homolog 11 OS=Arabidopsis thaliana OX=3702 GN=APUM11 PE=3 SV=2[more]
sp|Q9LVC3|PUM12_ARATH2.5e-1827.47Pumilio homolog 12 OS=Arabidopsis thaliana OX=3702 GN=APUM12 PE=2 SV=2[more]
BLAST of MELO3C028587.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C139|A0A1S3C139_CUCME1.1e-183100.00putative pumilio homolog 8, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10349567... [more]
tr|A0A0A0K7S4|A0A0A0K7S4_CUCSA1.4e-4584.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071550 PE=4 SV=1[more]
tr|A0A162AE57|A0A162AE57_DAUCA8.4e-2736.50Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_012806 ... [more]
tr|A0A1R3HUF5|A0A1R3HUF5_COCAP6.0e-2530.70Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_17055 PE=4 ... [more]
tr|A0A1R3GYZ0|A0A1R3GYZ0_9ROSI2.3e-2430.26Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_32563 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR033133PUM-HD
IPR011989ARM-like
IPR001313Pumilio_RNA-bd_rpt
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
molecular_function GO:0005488 binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C028587.2.1MELO3C028587.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001313Pumilio RNA-binding repeatSMARTSM00025pum_5coord: 190..224
e-value: 5.6
score: 14.7
coord: 114..150
e-value: 73.0
score: 6.2
coord: 77..112
e-value: 370.0
score: 0.8
coord: 226..261
e-value: 9.0
score: 13.2
coord: 151..188
e-value: 19.0
score: 10.6
IPR001313Pumilio RNA-binding repeatPFAMPF00806PUFcoord: 195..213
e-value: 1.9E-4
score: 20.9
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 190..225
score: 7.894
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 226..261
score: 8.291
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 73..112
score: 4.768
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 151..189
score: 8.127
IPR011989Armadillo-like helicalGENE3DG3DSA:1.25.10.10coord: 15..301
e-value: 2.4E-47
score: 163.7
NoneNo IPR availablePANTHERPTHR12537:SF64PUMILIO HOMOLOG 11-RELATEDcoord: 40..248
NoneNo IPR availablePANTHERPTHR12537RNA BINDING PROTEIN PUMILIO-RELATEDcoord: 40..248
IPR033133Pumilio homology domainPROSITEPS50303PUM_HDcoord: 1..320
score: 20.238
IPR016024Armadillo-type foldSUPERFAMILYSSF48371ARM repeatcoord: 35..249

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C028587.2Csa7G071550Cucumber (Chinese Long) v2cumedB509
MELO3C028587.2CsGy7G006590Cucumber (Gy14) v2cgybmedB465
MELO3C028587.2Cla016077Watermelon (97103) v1medwmB232
MELO3C028587.2ClCG02G006590Watermelon (Charleston Gray)medwcgB192
MELO3C028587.2CsaV3_7G008000Cucumber (Chinese Long) v3cucmedB536
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C028587.2Cucumber (Gy14) v2cgybmedB087
MELO3C028587.2Cucumber (Gy14) v2cgybmedB236
MELO3C028587.2Cucumber (Gy14) v1cgymedB377
MELO3C028587.2Cucumber (Gy14) v1cgymedB568
MELO3C028587.2Cucumber (Gy14) v1cgymedB639
MELO3C028587.2Cucurbita maxima (Rimu)cmamedB018
MELO3C028587.2Cucurbita maxima (Rimu)cmamedB106
MELO3C028587.2Cucurbita maxima (Rimu)cmamedB331
MELO3C028587.2Cucurbita maxima (Rimu)cmamedB535
MELO3C028587.2Cucurbita maxima (Rimu)cmamedB754
MELO3C028587.2Cucurbita maxima (Rimu)cmamedB809
MELO3C028587.2Cucurbita moschata (Rifu)cmomedB006
MELO3C028587.2Cucurbita moschata (Rifu)cmomedB091
MELO3C028587.2Cucurbita moschata (Rifu)cmomedB317
MELO3C028587.2Cucurbita moschata (Rifu)cmomedB523
MELO3C028587.2Cucurbita moschata (Rifu)cmomedB751
MELO3C028587.2Cucurbita pepo (Zucchini)cpemedB103
MELO3C028587.2Cucurbita pepo (Zucchini)cpemedB220
MELO3C028587.2Cucurbita pepo (Zucchini)cpemedB263
MELO3C028587.2Cucurbita pepo (Zucchini)cpemedB457
MELO3C028587.2Cucurbita pepo (Zucchini)cpemedB715
MELO3C028587.2Cucurbita pepo (Zucchini)cpemedB883
MELO3C028587.2Wild cucumber (PI 183967)cpimedB100
MELO3C028587.2Wild cucumber (PI 183967)cpimedB266
MELO3C028587.2Wild cucumber (PI 183967)cpimedB523
MELO3C028587.2Cucumber (Chinese Long) v2cumedB100
MELO3C028587.2Cucumber (Chinese Long) v2cumedB266
MELO3C028587.2Melon (DHL92) v3.6.1medmedB080
MELO3C028587.2Melon (DHL92) v3.6.1medmedB094
MELO3C028587.2Melon (DHL92) v3.6.1medmedB098
MELO3C028587.2Bottle gourd (USVL1VR-Ls)lsimedB260
MELO3C028587.2Bottle gourd (USVL1VR-Ls)lsimedB306
MELO3C028587.2Bottle gourd (USVL1VR-Ls)lsimedB485
MELO3C028587.2Watermelon (Charleston Gray)medwcgB214
MELO3C028587.2Watermelon (Charleston Gray)medwcgB184
MELO3C028587.2Watermelon (Charleston Gray)medwcgB204
MELO3C028587.2Watermelon (97103) v1medwmB214
MELO3C028587.2Watermelon (97103) v1medwmB215
MELO3C028587.2Watermelon (97103) v1medwmB227
MELO3C028587.2Silver-seed gourdcarmedB0189
MELO3C028587.2Silver-seed gourdcarmedB0196
MELO3C028587.2Silver-seed gourdcarmedB0306
MELO3C028587.2Silver-seed gourdcarmedB0382
MELO3C028587.2Silver-seed gourdcarmedB0463
MELO3C028587.2Cucumber (Chinese Long) v3cucmedB101
MELO3C028587.2Cucumber (Chinese Long) v3cucmedB269
MELO3C028587.2Cucumber (Chinese Long) v3cucmedB275
MELO3C028587.2Watermelon (97103) v2medwmbB160
MELO3C028587.2Watermelon (97103) v2medwmbB166
MELO3C028587.2Watermelon (97103) v2medwmbB178
MELO3C028587.2Watermelon (97103) v2medwmbB179
MELO3C028587.2Watermelon (97103) v2medwmbB190
MELO3C028587.2Wax gourdmedwgoB200
MELO3C028587.2Wax gourdmedwgoB228
MELO3C028587.2Wax gourdmedwgoB264