ClCG02G006590 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG02G006590
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Pumilio family protein
Location	CG_Chr02 : 7584866 .. 7588135 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCTCTTTTTTTTATAGACATCGAGTCGTGGTGAAGTTAATCTCTCGTTTGAGATACCCTTGTCAACAATGGACCATTGCATTGGCGATGAGTCCCCACGTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAATCTTTCTCCACCACCCAATGAGGTATTTATTTATCCTTAAGTGAAGCTTAATCAAGTAAAATTATTGAAAGTAAGAAATATAACGACTGTTTATTGCATATATGACATGCAGTTGATCTTGCTTAGAATAGCACAAAATTGCTTTGAGCTGGCAAGAAATCAAGCTGGTTGCTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTCGAGAAGTCCTCATATCCCCGTTGATACAAGATGTAGATAATCTTTCAATACATCCTTACGGGTAATTGCTTTTTATTATCTTATATATGCATATATTATTACTCTTCTAGTTAGTTGTTTATACATATATTAATGGTTAATTAATTACAGGAATTATGTAATTCAATATATGATTCAATTGGATGGAGCAAACATAGGATGGAGGATAATCAATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTATATTATCTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACAAATCAATATGGCAATTATGTTGTCCAGACAGCCATGTCGGTGGCTAAGGTTTGTTTATTTCCATCATTAATGTTTTCATTTTCTCGAAGCATATAATTATCATGTTCATTTAGCAAGTTATTATATACTATTTTTCTAAATGTAATAACATGCCTATATTATTTATCAAGCTGGGAAATGTCCATTAATAGAATGAGATCTTGTAGCATATCGTGTCGTCGGGATATTTAAAGGATCATTTTAGTCTCTAATAACATTTTTTTTTTGATAAAATTGCAGGGAAATGCTCATAGGTTACTTGAAAGAACCATTAAGAGCCATTGGTTTGTTCTTCAATTCCATCCATATGGAAAAAATGTGATTGCATCGGCCAAACGTCATAAAAAGAAGTCCAAATTACAAGAGTTTTAAAGTTGGGTGTATTATATATATATCTTCAAGGACATGTTATTATATATCATTTGTTTCATGTTATATTTGAAGGAATATGCAGCAAAAATAGCTTATCAGGAACATGTTATTTGCACAAAAGTTGCTTTAATTTGTTGGTAACCATTTGTTTTCATAAATTAGTTCTTTGTATTCCTTTATAATTAGTTATTGTTATATATATATATATATATACTAATTCTAGTATCCATCCTCTTTTTTAACGAAGCCACTTCTAATTTTAAAAAGGAGTAAACAAGAAAAAAAACAAATATAAAATCAATAAGGGTAGGTATGGTGACCTAAAAAATAGAAAACAAAGATACTCACGAAAAAAGTAATGTCTAATAAAACTAAAACTTTTGAAATTTAAAAACTAATGTCCCATTTGATAATCAATTTGAATTTTATTAGTTTCTAGTTTTGAAAATTAAAATTATTAAATAGCGAAAATCAAAACATAATAATTTATTAGATAGTGAAATAAATTAAGGAAGTTGGTAATAAAAGTTTGTTGAGAGAAAGGTTTTTAGGTTGAAGAGAATGTGCTCAGAATTCAAGTATATGGGTGATGAAGTGGATGAAGAAAATGGCGAAGAAGCAGAGAATGTATCATTATCTTTATCTATTTACAGTCATCATTAAGAAATTGGATGAGAATTCAAACGTAGTTTGTCTCACATGTTTCATTAGCCACCAACAATCGGTTGTTGTTGGCCGCTATATATATATATATATATATATATATAGCCAAACCTCAACATTGGTCGTCACCTCCCTTCGCCGTCGATTCAATATGTGGGCTTGGGTCAGTTGCCGTTACCACTATATCGTCGACATCAATTTAATCGACTTTCAAAGGAGATCAATTTAATTTGGTTTTAAGAAATTAATAATCGCTTAAGTTTGGATGAGAAAAGATTATTGTTGTAAGATAATAATCCGAAAAATAGTTTCTAATTAAACTTAAACATATCATTGATACAATATTCCATAGAACCTTTGCATGATTGAAGTAATTAAGAAAATCAAAACTTTAGAATGATTTTGTCTTTTGAATGTCAATTTTTAGTTTACCTTTATTTTCTTTGTTCAACTCCAAAATCTATCTTTTGTTATGTGTAAGATGATAATATGCTTATTGCTAGCAAATCTAGAGAAGATTTGAAGAAGGTGAAGCTAGTTGTAAAAAATGAATTTGATATGAAGACTCTAGGTGAATCGAAGAGGATCTTAGTATTGATATCTACAGAAAAAGAAAGAAAAATAATATTCGTAGCCGTCAGTGTACCTACTGTCATAAAATTCTAGAGAGATTTGACTTGGAAGAGCTAATTAAATAAATTATGGTTTACATTTATGAGTCCTAATTAAATTAGTATCTTTCCTTTGTTAGTTATGTTGGTGTCGCTGTATATTTATTCTTCCATGTAAAAATATGTTGATTACATCAATTATTCAATAAAATACATAAAACAACATGCTACTAGAGTTGGATTCTTGTCTTATTCAACTTTAGGTGTCGCCGCTCTATTTGATAGGCCTTTGTCGATCTATTGTCAACTGTGGCAAATCCACGCAGATTTGTCCATTAACACAGTCCCGTCAACGGAGCCAGATCTCCTTAGTCCTGTAAACCTCAAATTTTTCGTGAACAACATTATCGACCTTAGATCCACCACGCACAACTTCATTGACCACAAATCTACCTCCCACATTTGTCATGTAACCCTTTGCTGCCCAAGTTTCTGTCAACGCCTTCCAAGTTTGTTCGATCCCGTTTCACCCAATCCACACCATCATTGTCTAGTGCGTTTTCCGTTTAAGGGTTCCAGATCTACTACGAATACGCTTCAGATTTGTCGTTGTCCACCTCTGTCCTGTCAAGCATCCATCATTAGTCCCATCTCTCGACCTACTTTCGCGCACTTCTCCCAACATGTCGCTCGTGTAGATTTGACCGCCACCGTTCTGCTCGTGAATCCACCATCATGTAGATGCTCTACTTCATCCAGACCTTTTGTTGACGATCAGATTGTACCATCTACTGCCACTACAGACCAGATTCTGCTGTTGATCTCTACTTGA

mRNA sequence

ATTCTCTTTTTTTTATAGACATCGAGTCGTGGTGAAGTTAATCTCTCGTTTGAGATACCCTTGTCAACAATGGACCATTGCATTGGCGATGAGTCCCCACGTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAATCTTTCTCCACCACCCAATGAGTTGATCTTGCTTAGAATAGCACAAAATTGCTTTGAGCTGGCAAGAAATCAAGCTGGTTGCTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTCGAGAAGTCCTCATATCCCCGTTGATACAAGATGTAGATAATCTTTCAATACATCCTTACGGGAATTATGTAATTCAATATATGATTCAATTGGATGGAGCAAACATAGGATGGAGGATAATCAATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTATATTATCTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACAAATCAATATGGCAATTATGTTGTCCAGACAGCCATGTCGGTGGCTAAGGGAAATGCTCATAGGTTACTTGAAAGAACCATTAAGAGCCATTGGTTTGTTCTTCAATTCCATCCATATGGAAAAAATGTGATTGCATCGGCCAAACGTGTCGCCGCTCTATTTGATAGGCCTTTGTCGATCTATTGTCAACTGTGGCAAATCCACGCAGATTTGTCCATTAACACAGTCCCGTCAACGGAGCCAGATCTCCTTAGTCCTGTAAACCTCAAATTTTTCGTGAACAACATTATCGACCTTAGATCCACCACGCACAACTTCATTGACCACAAATCTACCTCCCACATTTGTCATGTAACCCTTTGCTGCCCAAGTTTCTGTCAACGCCTTCCAAGTTTGTTCGATCCCGTTTCACCCAATCCACACCATCATTGTCTAGTGCGTTTTCCGTTTAAGGGTTCCAGATCTACTACGAATACGCTTCAGATTTGTCGTTGTCCACCTCTGTCCTGTCAAGCATCCATCATTAGTCCCATCTCTCGACCTACTTTCGCGCACTTCTCCCAACATGTCGCTCGTGTAGATTTGACCGCCACCGTTCTGCTCGTGAATCCACCATCATGTAGATGCTCTACTTCATCCAGACCTTTTGTTGACGATCAGATTGTACCATCTACTGCCACTACAGACCAGATTCTGCTGTTGATCTCTACTTGA

Coding sequence (CDS)

ATGAGTCCCCACGTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAATCTTTCTCCACCACCCAATGAGTTGATCTTGCTTAGAATAGCACAAAATTGCTTTGAGCTGGCAAGAAATCAAGCTGGTTGCTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTCGAGAAGTCCTCATATCCCCGTTGATACAAGATGTAGATAATCTTTCAATACATCCTTACGGGAATTATGTAATTCAATATATGATTCAATTGGATGGAGCAAACATAGGATGGAGGATAATCAATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTATATTATCTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACAAATCAATATGGCAATTATGTTGTCCAGACAGCCATGTCGGTGGCTAAGGGAAATGCTCATAGGTTACTTGAAAGAACCATTAAGAGCCATTGGTTTGTTCTTCAATTCCATCCATATGGAAAAAATGTGATTGCATCGGCCAAACGTGTCGCCGCTCTATTTGATAGGCCTTTGTCGATCTATTGTCAACTGTGGCAAATCCACGCAGATTTGTCCATTAACACAGTCCCGTCAACGGAGCCAGATCTCCTTAGTCCTGTAAACCTCAAATTTTTCGTGAACAACATTATCGACCTTAGATCCACCACGCACAACTTCATTGACCACAAATCTACCTCCCACATTTGTCATGTAACCCTTTGCTGCCCAAGTTTCTGTCAACGCCTTCCAAGTTTGTTCGATCCCGTTTCACCCAATCCACACCATCATTGTCTAGTGCGTTTTCCGTTTAAGGGTTCCAGATCTACTACGAATACGCTTCAGATTTGTCGTTGTCCACCTCTGTCCTGTCAAGCATCCATCATTAGTCCCATCTCTCGACCTACTTTCGCGCACTTCTCCCAACATGTCGCTCGTGTAGATTTGACCGCCACCGTTCTGCTCGTGAATCCACCATCATGTAGATGCTCTACTTCATCCAGACCTTTTGTTGACGATCAGATTGTACCATCTACTGCCACTACAGACCAGATTCTGCTGTTGATCTCTACTTGA

Protein sequence

MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSHWFVLQFHPYGKNVIASAKRVAALFDRPLSIYCQLWQIHADLSINTVPSTEPDLLSPVNLKFFVNNIIDLRSTTHNFIDHKSTSHICHVTLCCPSFCQRLPSLFDPVSPNPHHHCLVRFPFKGSRSTTNTLQICRCPPLSCQASIISPISRPTFAHFSQHVARVDLTATVLLVNPPSCRCSTSSRPFVDDQIVPSTATTDQILLLIST

Homology

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BLAST of ClCG02G006590 vs. Swiss-Prot
Match: PUM7_ARATH (Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana GN=APUM7 PE=3 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 5.6e-28
Identity = 74/207 (35.75%), Postives = 117/207 (56.52%), Query Frame = 1


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           + P  L L KD  G H V++ C   LS   N+ I     + C E+A ++ GCC+LQ+CI 
Sbjct: 446 LRPGFLDLIKDLNGNH-VIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIA 505

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
           YS   +RQ RE LI+ + ++   L+  P+GNY +Q++I+L   +    ++ +LK  +V L
Sbjct: 506 YS---MRQQREKLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQL 565

Query: 121 SMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGN 180
           SM KF S++VE+CL  C      I+ E++   + +QLLQ   + Y N+V+Q A++  KG 
Sbjct: 566 SMQKFSSHMVERCLMHCPESRPQIVRELVSVPHFDQLLQ---DPYANFVIQAALAATKGP 625

Query: 181 AHRLLERTIKSHWFVLQFHPYGKNVIA 208
            H  L   I+ H  +L+ +PY K + +
Sbjct: 626 LHASLVEVIRPH-SILRNNPYCKRIFS 644

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BLAST of ClCG02G006590 vs. Swiss-Prot
Match: PUM12_ARATH (Pumilio homolog 12 OS=Arabidopsis thaliana GN=APUM12 PE=2 SV=2)

HSP 1 Score: 125.6 bits (314), Expect = 1.3e-27
Identity = 75/204 (36.76%), Postives = 112/204 (54.90%), Query Frame = 1


Query: 5   VLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSND 64
           ++ L K+  G H V R C   L P   + +      +C ELA ++ GCC+LQ+C+ YS  
Sbjct: 394 IVHLIKNVNGNHVVQR-CLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEG 453

Query: 65  KLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDK 124
           + +Q    L+S +  +   LS  P+GNYV+QY+ +L      + I+ +L+  +  LSM K
Sbjct: 454 EQKQH---LVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQK 513

Query: 125 FGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRL 184
             SNVVEKCL   +      I  I E  N  +L Q+  + YGNYV+Q A+  +KGN H L
Sbjct: 514 CSSNVVEKCLKLADDKHRARI--IRELINYGRLDQVMLDPYGNYVIQAALKQSKGNVHAL 573

Query: 185 LERTIKSHWFVLQFHPYGKNVIAS 209
           L   IK +   L+ +PYGK V+++
Sbjct: 574 LVDAIKLNISSLRTNPYGKKVLSA 591

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BLAST of ClCG02G006590 vs. Swiss-Prot
Match: PUM8_ARATH (Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana GN=APUM8 PE=3 SV=2)

HSP 1 Score: 122.9 bits (307), Expect = 8.1e-27
Identity = 69/207 (33.33%), Postives = 117/207 (56.52%), Query Frame = 1


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           + P  L L +D  G H V++ C   LS   NE I     + C ++A ++ GCC+LQ+CI 
Sbjct: 311 LRPGFLNLIRDLNGNH-VIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIA 370

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
           YS+   R   E L++ + ++   L+  PYGNY +Q++++L   +    ++ +LK  +V L
Sbjct: 371 YSSGLQR---EKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVEL 430

Query: 121 SMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGN 180
           SM KF S++VE+CL+ C      I+ E++   + + L+Q   + Y N+V+Q A++V KG+
Sbjct: 431 SMQKFSSHMVERCLTHCPESRPQIVRELISVPHFDILIQ---DPYANFVIQAALAVTKGS 490

Query: 181 AHRLLERTIKSHWFVLQFHPYGKNVIA 208
            H  L   I+ H  +L+ +PY K + +
Sbjct: 491 LHATLVEVIRPH-SILRNNPYCKRIFS 509

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BLAST of ClCG02G006590 vs. Swiss-Prot
Match: PUF4_YEAST (Pumilio homology domain family member 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PUF4 PE=1 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 1.7e-24
Identity = 70/214 (32.71%), Postives = 116/214 (54.21%), Query Frame = 1


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           + P+ + L+KD  G H V++ C   L P   + I   I+ +C ++A ++ GCC+LQ C++
Sbjct: 673 LRPYTVQLSKDLNGNH-VIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLD 732

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGW----RIINELKNK 120
           +      +  + L   L+  VD L++ P+GNYV+QY+I  +     +    +I++ LK +
Sbjct: 733 HGTT---EQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPR 792

Query: 121 FVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSV 180
            + LS+ KFGSNV+EK L       + +I EIL N  E  +  +  + YGNYV+QTA+ +
Sbjct: 793 AIELSIHKFGSNVIEKILKTAIVS-EPMILEILNNGGETGIQSLLNDSYGNYVLQTALDI 852

Query: 181 A-KGNAH---RLLERTIKSHWFVLQFHPYGKNVI 207
           + K N +   RL E         ++  P+GK +I
Sbjct: 853 SHKQNDYLYKRLSEIVAPLLVGPIRNTPHGKRII 881

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BLAST of ClCG02G006590 vs. Swiss-Prot
Match: PUM9_ARATH (Pumilio homolog 9 OS=Arabidopsis thaliana GN=APUM9 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 5.4e-23
Identity = 71/207 (34.30%), Postives = 108/207 (52.17%), Query Frame = 1


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           + P  L L KD  G H V++SC   L P  NE +L    + C E+A ++ GCC+LQ CI 
Sbjct: 362 LKPGFLALVKDLNGNH-VIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCIS 421

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
            S   +   RE L++ + ++  +LS  P+GNYV+QY+I    + +  +++ + +  +  L
Sbjct: 422 NS---VGLQRERLVAEISRNSLHLSQDPFGNYVVQYLIDQQVSAV--KLLVQFRMHYAEL 481

Query: 121 SMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGN 180
           +  KF S+V+EKCL         I+ E+L   N   LLQ   + Y NYV+QTA+SV KG 
Sbjct: 482 ATQKFSSHVIEKCLRKYPESRAEIVRELLCVPNFEYLLQ---DPYANYVIQTALSVTKGP 541

Query: 181 AHRLLERTIKSHWFVLQFHPYGKNVIA 208
               L   +   +  L   PY K + +
Sbjct: 542 VRAKLVAKV-YRYGKLHSSPYCKKIFS 558

HSP 2 Score: 47.8 bits (112), Expect = 3.3e-04
Identity = 31/161 (19.25%), Postives = 76/161 (47.20%), Query Frame = 1


Query: 45  LARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGAN 104
           +A++Q GC +LQ+ +E       + + +L++ +I  V  LS+ P+GNY++Q +  +    
Sbjct: 257 MAKDQIGCRVLQKLVEEGT--FHEAKVILLA-IIDHVVELSMDPFGNYIVQKLFDVSDEE 316

Query: 105 IGWRIINELKN---KFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQIC 164
               I++ L +   + + + ++ +G+ VV+K +   +         ++++  +   L + 
Sbjct: 317 QRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQ---IALVKSGLKPGFLALV 376

Query: 165 TNQYGNYVVQTAMSVAKGNAHRLLERTIKSHWFVLQFHPYG 203
            +  GN+V+Q+ +     N +  +      +   +  H +G
Sbjct: 377 KDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHG 411

HSP 3 Score: 43.5 bits (101), Expect = 6.3e-03
Identity = 44/175 (25.14%), Postives = 74/175 (42.29%), Query Frame = 1


Query: 62  SNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALS 121
           SN+ L  + E+  S  +   D +     G  V+Q +++    +    I+  + +  V LS
Sbjct: 240 SNNDLVSMVEIYGSVNLMAKDQI-----GCRVLQKLVEEGTFHEAKVILLAIIDHVVELS 299

Query: 122 MDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNA 181
           MD FG+ +V+K     +     +I  +L  +N  +L++IC N YG  VVQ  +   K   
Sbjct: 300 MDPFGNYIVQKLFDVSDEEQRTLIVSVL-TSNPRELIRICLNTYGTRVVQKMIETVKTKQ 359

Query: 182 H-RLLERTIKSHWFVLQFHPYGKNVIASAKRVAALFDRPLSI-----YCQLWQIH 231
              L++  +K  +  L     G +VI S  +     D    +     YC    IH
Sbjct: 360 QIALVKSGLKPGFLALVKDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIH 408

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BLAST of ClCG02G006590 vs. TrEMBL
Match: A0A0A0K7S4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071550 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.4e-70
Identity = 133/180 (73.89%), Postives = 154/180 (85.56%), Query Frame = 1


Query: 32  ELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGN 91
           +LI+LR+AQNC ELAR QA CCILQECIEYSN+ LRQL+EVLISPLIQDV +LS HPYGN
Sbjct: 2   QLIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDLSKHPYGN 61

Query: 92  YVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILEN 151
           YVIQ+MIQLDG NIG RII EL +KFV LSMDK+GSNVVEKCLSCCEG  + II+EILE 
Sbjct: 62  YVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGISNDIIFEILEG 121

Query: 152 NNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSHWFVLQFHPYGKNVIASAKR 211
           N  ++L+QICTNQYGN+VVQT MS+AKG   +LLE+ IKSHW VLQ H YG+NVI+S +R
Sbjct: 122 NGRDRLIQICTNQYGNFVVQTVMSIAKGKIRKLLEKAIKSHWLVLQQHLYGRNVISSIRR 181

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BLAST of ClCG02G006590 vs. TrEMBL
Match: W9SG11_9ROSA (Pumilio-12-like protein OS=Morus notabilis GN=L484_010253 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.5e-30
Identity = 78/212 (36.79%), Postives = 128/212 (60.38%), Query Frame = 1


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           MSP+ +  +K   G H V++ C  + S   N  +L  +A NC E+A +++GCC+LQ+C+E
Sbjct: 301 MSPYAVPFSKSPNGQH-VIQYCLRHFSDEDNAHLLNEVADNCIEVATDKSGCCVLQQCVE 360

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
            S+     +R+ L+  +I+    LS   YGNYV+QY++ +    +  R+  +L++ F++L
Sbjct: 361 NSHG---HVRDRLVDEIIEMAILLSEDRYGNYVVQYILGMKSPEMTTRLFIQLRSSFMSL 420

Query: 121 SMDKFGSNVVEKCL-SCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKG 180
           S+ K+GSNVVEKCL  C E     II E+L N N   LL   T+ YGNYV+Q+++SV+KG
Sbjct: 421 SLGKYGSNVVEKCLRECDEFQASKIIKELLRNPNAPMLL---TDPYGNYVIQSSLSVSKG 480

Query: 181 NAHRLLERTIKSHWFVLQFHPYGKNVIASAKR 212
              R L   +  +   ++ + YG+ ++A  +R
Sbjct: 481 EVRRELLNLVDRYAQTMRSNLYGRKILAWLER 505

[Close]

BLAST of ClCG02G006590 vs. TrEMBL
Match: M5XWB3_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024026mg PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 3.2e-30
Identity = 79/208 (37.98%), Postives = 130/208 (62.50%), Query Frame = 1


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           +SP V+ L+K+  G H V+  C  + S   NE +L  +A NC  +A++++GCC+LQ+C+E
Sbjct: 257 LSPGVVALSKNSNGQH-VIEHCLEHFSVQDNEHLLHVVANNCCGIAKDKSGCCVLQKCVE 316

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
           +SN K    RE L++ +      L++  YGNYV+Q+++ L    I   ++ +L+  +++L
Sbjct: 317 HSNGK---NRERLVAAITAKAIVLAVDRYGNYVLQHLLGLRMPQITENLLRQLRGSYMSL 376

Query: 121 SMDKFGSNVVEKC-LSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKG 180
           S +K+GSNVVEKC L   E     II+E+L N N + LL    + +GNYV+QTA+SV+KG
Sbjct: 377 SCNKYGSNVVEKCLLDSGEEQSSQIIFELLTNRNISMLL---LHPFGNYVIQTALSVSKG 436

Query: 181 NAHRLLERTIKSHWFVLQFHPYGKNVIA 208
             H  L   ++ +  V++ + YG+ V+A
Sbjct: 437 VYHDALLNLVQLNSHVMRGNYYGQKVLA 457

[Close]

BLAST of ClCG02G006590 vs. TrEMBL
Match: A0A022RBH3_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a020918mg PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.2e-30
Identity = 82/206 (39.81%), Postives = 118/206 (57.28%), Query Frame = 1


Query: 6   LTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDK 65
           + L +   G H V++ C  +  P  NE+IL  IA NC  +A +++GCC+LQ C+  +   
Sbjct: 337 IELTRSMNGQH-VIQHCLKSFPPQDNEIILQVIADNCLAIASDRSGCCVLQPCVSSAQG- 396

Query: 66  LRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKF 125
             + R  +I+ L      LS  PYGNYV+QYM+ +    +  +I+ +L   FV LSMDK+
Sbjct: 397 --ETRNRMIANLTAYALLLSTDPYGNYVVQYMVDMPKVKV--QILTQLSGNFVPLSMDKY 456

Query: 126 GSNVVEKCLSCCEGG-FDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRL 185
           GSNVVEKCL    G     I+ EI+ + N  QLLQ   + YGNYV Q+A+  +KG A   
Sbjct: 457 GSNVVEKCLKGYNGNQLLSILNEIMNSPNFVQLLQ---DPYGNYVAQSALICSKGAARDA 516

Query: 186 LERTIKSHWFVLQFHPYGKNVIASAK 211
           L   I S++  L  HP+GK V+  A+
Sbjct: 517 LTERIHSNYAFLHSHPHGKRVLERAR 533

[Close]

BLAST of ClCG02G006590 vs. TrEMBL
Match: A0A067LC35_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16061 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.2e-30
Identity = 79/217 (36.41%), Postives = 136/217 (62.67%), Query Frame = 1


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           +SP  + LAKD  G H V++ C  + S   N+ +L  +A+NCFE+A +++GCC+LQ+C+E
Sbjct: 305 LSPGAVALAKDMNG-HHVIKHCLEHFSDEDNKYLLNMVAENCFEIATDKSGCCVLQQCVE 364

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
            S+    + R+ L++ +I +   L+   YGNYV+Q+++ L  ++I   ++ +L+  + AL
Sbjct: 365 CSHG---EPRDRLVAEIILNALPLAEDRYGNYVVQHILGLRVSHITANLLRQLEGSYAAL 424

Query: 121 SMDKFGSNVVEKCL-SCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKG 180
           + +K+GSNVVEK L    E     II+E+L ++N + LL    + +GNYV+Q+A+SV+KG
Sbjct: 425 ACNKYGSNVVEKFLFETREEQSTQIIWELLRSSNASMLL---VDPFGNYVIQSALSVSKG 484

Query: 181 NAHRLLERTIKSHWFVLQFHPYGKNVIASAKRVAALF 217
              R L   I+ H   ++ + YGK V+A  ++   L+
Sbjct: 485 AVLRALLELIQIHIPRMRSNIYGKKVLAWLQKERMLY 514

[Close]

BLAST of ClCG02G006590 vs. TAIR10
Match: AT1G78160.1 (AT1G78160.1 pumilio 7)

HSP 1 Score: 126.7 bits (317), Expect = 3.2e-29
Identity = 74/207 (35.75%), Postives = 117/207 (56.52%), Query Frame = 1


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           + P  L L KD  G H V++ C   LS   N+ I     + C E+A ++ GCC+LQ+CI 
Sbjct: 446 LRPGFLDLIKDLNGNH-VIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIA 505

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
           YS   +RQ RE LI+ + ++   L+  P+GNY +Q++I+L   +    ++ +LK  +V L
Sbjct: 506 YS---MRQQREKLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQL 565

Query: 121 SMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGN 180
           SM KF S++VE+CL  C      I+ E++   + +QLLQ   + Y N+V+Q A++  KG 
Sbjct: 566 SMQKFSSHMVERCLMHCPESRPQIVRELVSVPHFDQLLQ---DPYANFVIQAALAATKGP 625

Query: 181 AHRLLERTIKSHWFVLQFHPYGKNVIA 208
            H  L   I+ H  +L+ +PY K + +
Sbjct: 626 LHASLVEVIRPH-SILRNNPYCKRIFS 644

[Close]

BLAST of ClCG02G006590 vs. TAIR10
Match: AT5G56510.1 (AT5G56510.1 pumilio 12)

HSP 1 Score: 125.6 bits (314), Expect = 7.1e-29
Identity = 75/204 (36.76%), Postives = 112/204 (54.90%), Query Frame = 1


Query: 5   VLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSND 64
           ++ L K+  G H V R C   L P   + +      +C ELA ++ GCC+LQ+C+ YS  
Sbjct: 394 IVHLIKNVNGNHVVQR-CLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEG 453

Query: 65  KLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDK 124
           + +Q    L+S +  +   LS  P+GNYV+QY+ +L      + I+ +L+  +  LSM K
Sbjct: 454 EQKQH---LVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQK 513

Query: 125 FGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRL 184
             SNVVEKCL   +      I  I E  N  +L Q+  + YGNYV+Q A+  +KGN H L
Sbjct: 514 CSSNVVEKCLKLADDKHRARI--IRELINYGRLDQVMLDPYGNYVIQAALKQSKGNVHAL 573

Query: 185 LERTIKSHWFVLQFHPYGKNVIAS 209
           L   IK +   L+ +PYGK V+++
Sbjct: 574 LVDAIKLNISSLRTNPYGKKVLSA 591

[Close]

BLAST of ClCG02G006590 vs. TAIR10
Match: AT1G22240.1 (AT1G22240.1 pumilio 8)

HSP 1 Score: 122.9 bits (307), Expect = 4.6e-28
Identity = 69/207 (33.33%), Postives = 117/207 (56.52%), Query Frame = 1


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           + P  L L +D  G H V++ C   LS   NE I     + C ++A ++ GCC+LQ+CI 
Sbjct: 311 LRPGFLNLIRDLNGNH-VIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIA 370

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
           YS+   R   E L++ + ++   L+  PYGNY +Q++++L   +    ++ +LK  +V L
Sbjct: 371 YSSGLQR---EKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVEL 430

Query: 121 SMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGN 180
           SM KF S++VE+CL+ C      I+ E++   + + L+Q   + Y N+V+Q A++V KG+
Sbjct: 431 SMQKFSSHMVERCLTHCPESRPQIVRELISVPHFDILIQ---DPYANFVIQAALAVTKGS 490

Query: 181 AHRLLERTIKSHWFVLQFHPYGKNVIA 208
            H  L   I+ H  +L+ +PY K + +
Sbjct: 491 LHATLVEVIRPH-SILRNNPYCKRIFS 509

[Close]

BLAST of ClCG02G006590 vs. TAIR10
Match: AT1G35730.1 (AT1G35730.1 pumilio 9)

HSP 1 Score: 110.2 bits (274), Expect = 3.1e-24
Identity = 71/207 (34.30%), Postives = 108/207 (52.17%), Query Frame = 1


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           + P  L L KD  G H V++SC   L P  NE +L    + C E+A ++ GCC+LQ CI 
Sbjct: 362 LKPGFLALVKDLNGNH-VIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCIS 421

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
            S   +   RE L++ + ++  +LS  P+GNYV+QY+I    + +  +++ + +  +  L
Sbjct: 422 NS---VGLQRERLVAEISRNSLHLSQDPFGNYVVQYLIDQQVSAV--KLLVQFRMHYAEL 481

Query: 121 SMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGN 180
           +  KF S+V+EKCL         I+ E+L   N   LLQ   + Y NYV+QTA+SV KG 
Sbjct: 482 ATQKFSSHVIEKCLRKYPESRAEIVRELLCVPNFEYLLQ---DPYANYVIQTALSVTKGP 541

Query: 181 AHRLLERTIKSHWFVLQFHPYGKNVIA 208
               L   +   +  L   PY K + +
Sbjct: 542 VRAKLVAKV-YRYGKLHSSPYCKKIFS 558

HSP 2 Score: 47.8 bits (112), Expect = 1.9e-05
Identity = 31/161 (19.25%), Postives = 76/161 (47.20%), Query Frame = 1


Query: 45  LARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGAN 104
           +A++Q GC +LQ+ +E       + + +L++ +I  V  LS+ P+GNY++Q +  +    
Sbjct: 257 MAKDQIGCRVLQKLVEEGT--FHEAKVILLA-IIDHVVELSMDPFGNYIVQKLFDVSDEE 316

Query: 105 IGWRIINELKN---KFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQIC 164
               I++ L +   + + + ++ +G+ VV+K +   +         ++++  +   L + 
Sbjct: 317 QRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQ---IALVKSGLKPGFLALV 376

Query: 165 TNQYGNYVVQTAMSVAKGNAHRLLERTIKSHWFVLQFHPYG 203
            +  GN+V+Q+ +     N +  +      +   +  H +G
Sbjct: 377 KDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHG 411

HSP 3 Score: 43.5 bits (101), Expect = 3.5e-04
Identity = 44/175 (25.14%), Postives = 74/175 (42.29%), Query Frame = 1


Query: 62  SNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALS 121
           SN+ L  + E+  S  +   D +     G  V+Q +++    +    I+  + +  V LS
Sbjct: 240 SNNDLVSMVEIYGSVNLMAKDQI-----GCRVLQKLVEEGTFHEAKVILLAIIDHVVELS 299

Query: 122 MDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNA 181
           MD FG+ +V+K     +     +I  +L  +N  +L++IC N YG  VVQ  +   K   
Sbjct: 300 MDPFGNYIVQKLFDVSDEEQRTLIVSVL-TSNPRELIRICLNTYGTRVVQKMIETVKTKQ 359

Query: 182 H-RLLERTIKSHWFVLQFHPYGKNVIASAKRVAALFDRPLSI-----YCQLWQIH 231
              L++  +K  +  L     G +VI S  +     D    +     YC    IH
Sbjct: 360 QIALVKSGLKPGFLALVKDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIH 408

[Close]

BLAST of ClCG02G006590 vs. TAIR10
Match: AT4G08840.1 (AT4G08840.1 pumilio 11)

HSP 1 Score: 109.8 bits (273), Expect = 4.0e-24
Identity = 67/205 (32.68%), Postives = 107/205 (52.20%), Query Frame = 1


Query: 3   PHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYS 62
           P  L+L ++  G H +L +C    SP  N+ IL    + C E+A  + GCC+LQ C+ YS
Sbjct: 356 PGFLSLFRELNGNHVIL-NCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYS 415

Query: 63  NDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSM 122
              + +  E L+  + ++   L+  P+GNY++QY+I+     +   ++ EL+  +V L+ 
Sbjct: 416 ---VGEQHEKLVDEISRNSLLLAQDPFGNYLVQYIIEKKVGGVN--VLFELRGNYVKLAT 475

Query: 123 DKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAH 182
            KFGS+VVEKCL         I+ E++   N   LLQ   + Y NYV+Q A+S  KG   
Sbjct: 476 QKFGSHVVEKCLRYYPESRSQIVNELVSVLNFGYLLQ---DPYANYVIQCALSKTKGFVR 535

Query: 183 RLLERTIKSHWFVLQFHPYGKNVIA 208
             L   ++  +  L+  PY K + +
Sbjct: 536 ASLVEKVR-RYENLKMTPYCKRIFS 550

HSP 2 Score: 45.1 bits (105), Expect = 1.2e-04
Identity = 29/95 (30.53%), Postives = 52/95 (54.74%), Query Frame = 1


Query: 45  LARNQAGCCILQECIEYSN--DKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDG 104
           +A++Q GC +LQ+ ++  N  D +   +EV     I +V  L   P+GNY+IQ +I++  
Sbjct: 249 MAKDQLGCRLLQKFVDEGNFVDVMIIFKEV-----INNVIELGTDPFGNYLIQKLIEVCN 308

Query: 105 ANIGWRIINELKNK---FVALSMDKFGSNVVEKCL 135
                +I+  L +K    V +S++ +G+ VV+K +
Sbjct: 309 EEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLI 338

[Close]

BLAST of ClCG02G006590 vs. NCBI nr
Match: gi|700188633|gb|KGN43866.1| (hypothetical protein Csa_7G071550 [Cucumis sativus])

HSP 1 Score: 275.0 bits (702), Expect = 2.0e-70
Identity = 133/180 (73.89%), Postives = 154/180 (85.56%), Query Frame = 1


Query: 32  ELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGN 91
           +LI+LR+AQNC ELAR QA CCILQECIEYSN+ LRQL+EVLISPLIQDV +LS HPYGN
Sbjct: 2   QLIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDLSKHPYGN 61

Query: 92  YVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILEN 151
           YVIQ+MIQLDG NIG RII EL +KFV LSMDK+GSNVVEKCLSCCEG  + II+EILE 
Sbjct: 62  YVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGISNDIIFEILEG 121

Query: 152 NNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSHWFVLQFHPYGKNVIASAKR 211
           N  ++L+QICTNQYGN+VVQT MS+AKG   +LLE+ IKSHW VLQ H YG+NVI+S +R
Sbjct: 122 NGRDRLIQICTNQYGNFVVQTVMSIAKGKIRKLLEKAIKSHWLVLQQHLYGRNVISSIRR 181

[Close]

BLAST of ClCG02G006590 vs. NCBI nr
Match: gi|659110995|ref|XP_008455521.1| (PREDICTED: putative pumilio homolog 8, chloroplastic [Cucumis melo])

HSP 1 Score: 227.6 bits (579), Expect = 3.7e-56
Identity = 106/134 (79.10%), Postives = 120/134 (89.55%), Query Frame = 1


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           MSPHVLTLAKDFQGGH+V++SCF + SP PNELILLR+AQNC ELAR QAGCCILQECIE
Sbjct: 115 MSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIE 174

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
           YSN+  RQLREVLI+PLI+D  +LS HPYGNYVIQ+MIQLDG NIGWR+I EL +KFV L
Sbjct: 175 YSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVEL 234

Query: 121 SMDKFGSNVVEKCL 135
           SMDK+GSNVVEKC+
Sbjct: 235 SMDKYGSNVVEKCV 248

[Close]

BLAST of ClCG02G006590 vs. NCBI nr
Match: gi|1009135460|ref|XP_015885003.1| (PREDICTED: putative pumilio homolog 8, chloroplastic isoform X2 [Ziziphus jujuba])

HSP 1 Score: 146.0 bits (367), Expect = 1.4e-31
Identity = 80/210 (38.10%), Postives = 129/210 (61.43%), Query Frame = 1


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           + P  + L K    GH V++ C  N S   NE +L  +  NC+ +A +++GCC+LQ+CI+
Sbjct: 350 LGPGAVALTKS-TNGHHVIQYCLKNFSEKDNEYLLNEVVDNCYGIATDKSGCCVLQQCIK 409

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
           YS     +LRE+L++ ++ +   L+   YGNYV+QY++ L    +   I+ +LK  F +L
Sbjct: 410 YSQG---ELRELLVAEIVTNAMLLAEDRYGNYVVQYLLDLRIPQVTASILRQLKGSFSSL 469

Query: 121 SMDKFGSNVVEKCLSCCEGGFD---YIIYEILENNNENQLLQICTNQYGNYVVQTAMSVA 180
           S +K+GSNVVEKCL     G D    II E++ + N + LL    + YGNYV+Q+A+SV+
Sbjct: 470 SCNKYGSNVVEKCLLVT--GPDQSALIIMELITSPNPSMLL---LDPYGNYVIQSALSVS 529

Query: 181 KGNAHRLLERTIKSHWFVLQFHPYGKNVIA 208
           KG  H+ LE  ++ +  +++ + YGK V+A
Sbjct: 530 KGIIHKALENLVQMNSPMMRSNLYGKKVLA 550

[Close]

BLAST of ClCG02G006590 vs. NCBI nr
Match: gi|1009135460|ref|XP_015885003.1| (PREDICTED: putative pumilio homolog 8, chloroplastic isoform X2 [Ziziphus jujuba])

HSP 1 Score: 50.4 bits (119), Expect = 8.2e-03
Identity = 45/199 (22.61%), Postives = 85/199 (42.71%), Query Frame = 1


Query: 45  LARNQAGCCILQECIEYS-NDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGA 104
           +A++Q GC ILQ  +E S N+++     ++   +I+ V +L I PYGNYV+Q +++L   
Sbjct: 245 MAKDQYGCRILQRTMESSTNEEIN----IIFLEVIEHVGDLMIDPYGNYVVQKLVELCNE 304

Query: 105 NIGWRI---INELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYII---------YEILEN 164
                I   +  +  + V + ++  G+  V+K L     G    I           + ++
Sbjct: 305 EQRTHILLVLTRIDFRLVTICLNMHGTRAVQKLLESLTKGHQISIVMKALGPGAVALTKS 364

Query: 165 NNENQLLQIC------------------------TNQYGNYVVQTAMSVAKGNAHRLLER 207
            N + ++Q C                        T++ G  V+Q  +  ++G    LL  
Sbjct: 365 TNGHHVIQYCLKNFSEKDNEYLLNEVVDNCYGIATDKSGCCVLQQCIKYSQGELRELLVA 424

HSP 2 Score: 141.4 bits (355), Expect = 3.5e-30
Identity = 78/212 (36.79%), Postives = 128/212 (60.38%), Query Frame = 1


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           MSP+ +  +K   G H V++ C  + S   N  +L  +A NC E+A +++GCC+LQ+C+E
Sbjct: 301 MSPYAVPFSKSPNGQH-VIQYCLRHFSDEDNAHLLNEVADNCIEVATDKSGCCVLQQCVE 360

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
            S+     +R+ L+  +I+    LS   YGNYV+QY++ +    +  R+  +L++ F++L
Sbjct: 361 NSHG---HVRDRLVDEIIEMAILLSEDRYGNYVVQYILGMKSPEMTTRLFIQLRSSFMSL 420

Query: 121 SMDKFGSNVVEKCL-SCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKG 180
           S+ K+GSNVVEKCL  C E     II E+L N N   LL   T+ YGNYV+Q+++SV+KG
Sbjct: 421 SLGKYGSNVVEKCLRECDEFQASKIIKELLRNPNAPMLL---TDPYGNYVIQSSLSVSKG 480

Query: 181 NAHRLLERTIKSHWFVLQFHPYGKNVIASAKR 212
              R L   +  +   ++ + YG+ ++A  +R
Sbjct: 481 EVRRELLNLVDRYAQTMRSNLYGRKILAWLER 505

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BLAST of ClCG02G006590 vs. NCBI nr
Match: gi|645226973|ref|XP_008220292.1| (PREDICTED: pumilio homolog 12-like [Prunus mume])

HSP 1 Score: 141.4 bits (355), Expect = 3.5e-30
Identity = 79/208 (37.98%), Postives = 130/208 (62.50%), Query Frame = 1


Query: 1   MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIE 60
           +SP V+ L+K+  G H V+  C  + S   NE +L  +A NC  +A++++GCC+LQ+C+E
Sbjct: 269 LSPGVVALSKNSNGQH-VIEHCLEHFSVQDNEHLLHVVANNCCGIAKDKSGCCVLQKCVE 328

Query: 61  YSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVAL 120
           +SN K    RE L++ +      L++  YGNYV+Q+++ L    I   ++ +L+  +++L
Sbjct: 329 HSNGK---NREHLVAAITAKAIVLAVDRYGNYVLQHLLGLRMPQITENLLRQLRGSYMSL 388

Query: 121 SMDKFGSNVVEKC-LSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKG 180
           S +K+GSNVVEKC L   E     II+E+L N N + LL    + +GNYV+QTA+SV+KG
Sbjct: 389 SCNKYGSNVVEKCLLDSGEEQSSQIIFELLTNRNVSMLL---LHPFGNYVIQTALSVSKG 448

Query: 181 NAHRLLERTIKSHWFVLQFHPYGKNVIA 208
             H  L   ++ +  V++ + YG+ V+A
Sbjct: 449 VYHDALFNLVQLNSHVMRGNYYGQKVLA 469

The following BLAST results are available for this feature:

BLAST of ClCG02G006590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PUM7_ARATH	5.6e-28	35.75	Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana GN=APUM7 PE=3 ...	[more]
PUM12_ARATH	1.3e-27	36.76	Pumilio homolog 12 OS=Arabidopsis thaliana GN=APUM12 PE=2 SV=2	[more]
PUM8_ARATH	8.1e-27	33.33	Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana GN=APUM8 PE=3 ...	[more]
PUF4_YEAST	1.7e-24	32.71	Pumilio homology domain family member 4 OS=Saccharomyces cerevisiae (strain ATCC...	[more]
PUM9_ARATH	5.4e-23	34.30	Pumilio homolog 9 OS=Arabidopsis thaliana GN=APUM9 PE=2 SV=1	[more]

BLAST of ClCG02G006590 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7S4_CUCSA	1.4e-70	73.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071550 PE=4 SV=1	[more]
W9SG11_9ROSA	2.5e-30	36.79	Pumilio-12-like protein OS=Morus notabilis GN=L484_010253 PE=4 SV=1	[more]
M5XWB3_PRUPE	3.2e-30	37.98	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024026mg PE=4 S...	[more]
A0A022RBH3_ERYGU	4.2e-30	39.81	Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a020918mg...	[more]
A0A067LC35_JATCU	4.2e-30	36.41	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16061 PE=4 SV=1	[more]

BLAST of ClCG02G006590 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78160.1	3.2e-29	35.75	pumilio 7	[more]
AT5G56510.1	7.1e-29	36.76	pumilio 12	[more]
AT1G22240.1	4.6e-28	33.33	pumilio 8	[more]
AT1G35730.1	3.1e-24	34.30	pumilio 9	[more]
AT4G08840.1	4.0e-24	32.68	pumilio 11	[more]

BLAST of ClCG02G006590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700188633\|gb\|KGN43866.1\|	2.0e-70	73.89	hypothetical protein Csa_7G071550 [Cucumis sativus]	[more]
gi\|659110995\|ref\|XP_008455521.1\|	3.7e-56	79.10	PREDICTED: putative pumilio homolog 8, chloroplastic [Cucumis melo]	[more]
gi\|1009135460\|ref\|XP_015885003.1\|	1.4e-31	38.10	PREDICTED: putative pumilio homolog 8, chloroplastic isoform X2 [Ziziphus jujuba...	[more]
gi\|1009135460\|ref\|XP_015885003.1\|	8.2e-03	22.61	PREDICTED: putative pumilio homolog 8, chloroplastic isoform X2 [Ziziphus jujuba...	[more]
gi\|645226973\|ref\|XP_008220292.1\|	3.5e-30	37.98	PREDICTED: pumilio homolog 12-like [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001313	Pumilio_RNA-bd_rpt
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0005488	binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G006590.1	ClCG02G006590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001313	Pumilio RNA-binding repeat	PFAM	PF00806	PUF	coord: 155..173 score: 8.4E-5coord: 78..99 score: 1.1E-4coord: 112..137 score: 5.
IPR001313	Pumilio RNA-binding repeat	SMART	SM00025	pum_5	coord: 112..147 score: 0.003coord: 37..72 score: 6.0coord: 76..111 score: 1.7coord: 152..186 score:
IPR001313	Pumilio RNA-binding repeat	PROFILE	PS50302	PUM	coord: 76..111 score: 8.454coord: 37..75 score: 8.804coord: 152..190 score: 8.244coord: 112..147 score: 8
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 2..211 score: 1.8
IPR016024	Armadillo-type fold	unknown	SSF48371	ARM repeat	coord: 3..207 score: 2.01
None	No IPR available	PANTHER	PTHR12537	RNA BINDING PROTEIN PUMILIO-RELATED	coord: 2..205 score: 2.8
None	No IPR available	PANTHER	PTHR12537:SF13	SUPPRESSOR PROTEIN MPT5	coord: 2..205 score: 2.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG02G006590	Cla016077	Watermelon (97103) v1	wcgwmB198
ClCG02G006590	Cla97C02G033580	Watermelon (97103) v2	wcgwmbB138
ClCG02G006590	Lsi03G005560	Bottle gourd (USVL1VR-Ls)	lsiwcgB233
ClCG02G006590	MELO3C028587.2	Melon (DHL92) v3.6.1	medwcgB192

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG02G006590	Melon (DHL92) v3.6.1	medwcgB274
ClCG02G006590	Silver-seed gourd	carwcgB0181
ClCG02G006590	Silver-seed gourd	carwcgB0288
ClCG02G006590	Silver-seed gourd	carwcgB0368
ClCG02G006590	Silver-seed gourd	carwcgB0445
ClCG02G006590	Cucumber (Chinese Long) v3	cucwcgB145
ClCG02G006590	Cucumber (Chinese Long) v3	cucwcgB572
ClCG02G006590	Watermelon (97103) v2	wcgwmbB159
ClCG02G006590	Watermelon (97103) v2	wcgwmbB168
ClCG02G006590	Wax gourd	wcgwgoB281
ClCG02G006590	Watermelon (Charleston Gray)	wcgwcgB139
ClCG02G006590	Cucumber (Gy14) v1	cgywcgB396
ClCG02G006590	Cucurbita maxima (Rimu)	cmawcgB101
ClCG02G006590	Cucurbita maxima (Rimu)	cmawcgB293
ClCG02G006590	Cucurbita maxima (Rimu)	cmawcgB460
ClCG02G006590	Cucurbita maxima (Rimu)	cmawcgB643
ClCG02G006590	Cucurbita moschata (Rifu)	cmowcgB088
ClCG02G006590	Cucurbita moschata (Rifu)	cmowcgB459
ClCG02G006590	Cucurbita moschata (Rifu)	cmowcgB645
ClCG02G006590	Wild cucumber (PI 183967)	cpiwcgB576
ClCG02G006590	Cucumber (Chinese Long) v2	cuwcgB133
ClCG02G006590	Cucumber (Chinese Long) v2	cuwcgB547
ClCG02G006590	Melon (DHL92) v3.5.1	mewcgB197
ClCG02G006590	Melon (DHL92) v3.5.1	mewcgB283
ClCG02G006590	Watermelon (97103) v1	wcgwmB180
ClCG02G006590	Cucurbita pepo (Zucchini)	cpewcgB233
ClCG02G006590	Cucurbita pepo (Zucchini)	cpewcgB378
ClCG02G006590	Cucurbita pepo (Zucchini)	cpewcgB590
ClCG02G006590	Bottle gourd (USVL1VR-Ls)	lsiwcgB430
ClCG02G006590	Cucumber (Gy14) v2	cgybwcgB507