Cla016077 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTCCCCACGTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAATCTTTCTCCACCACCCAATGAGGTATTTATTTATCCTTAAGTGAAGCTTAATCAAGTAAAATTATTGAAAGTAAGAAATATAACGACTGTTTATTGCATATATGACATGCAGTTGATCTTGCTTAGAATAGCACAAAATTGCTTTGAGCTGGCAAGAAATCAAGCTGGTTGCTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTCGAGAAGTCCTCATATCCCCGTTGATACAAGATGTAGATAATCTTTCAATACATCCTTACGGGTAATTGCTTTTTATTATCTTATATATGCATATATTATTACTCTTCTAGTTAGTTGTTTATACATATATTAATGGTTAATTAATTACAGGAATTATGTAATTCAATATATGATTCAATTGGATGGAGCAAACATAGGATGGAGGATAATCAATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTATATTATCTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACAAATCAATATGGCAATTATGTTGTCCAGACAGCCATGTCGGTGGCTAAGGTTTGTTTATTTCCATCATTAATGTTTTCATTTTCTCGAAGCATATAATTATCATGTTCATTTAGCAAGTTATTATATACTATTTTTCTAAATGTAATAACATGCCTATATTATTTATCAAGCTGGGAAATGTCCATTAATAGAATGAGATCTTGTAGCATATCGTGTCGTCGGGATATTTAAAGGATCATTTTAGTCTCTAATAACATTTTTTTTTTGATAAAATTGCAGGGAAATGCTCATAGGTTACTTGAAAGAACCATTAAGAGCCATTGGTTTGTTCTTCAATTCCATCCATATGGAAAAAATGTGATTGCATCGGCCAAACGTCATAAAAAGAAGTCCAAATTACAAGAGTTTTAAAGTTGGGTGTATTATATATATATCTTCAAGGACATGTTATTATATATCATTTGTTTCATGTTATATTTGAAGGAATATGCAGCAAAAATAGCTTATCAGGAACATGTTATTTGCACAAAAGTTGCTTTAATTTGTTGGTAACCATTTGTTTTCATAAATTAGTTCTTTGTATTCCTTTATAATTAGTTATTGTTATATATATATATATATATACTAATTCTAGTATCCATCCTCTTTTTTAACGAAGCCACTTCTAATTTTAAAAAGGAGTAAACAAGAAAAAAAACAAATATAAAATCAATAAGGGTAGGTATGGTGACCTAAAAAATAGAAAACAAAGATACTCACGAAAAAAGTAATGTCTAATAAAACTAAAACTTTTGAAATTTAAAAACTAATGTCCCATTTGATAATCAATTTGAATTTTATTAGTTTCTAGTTTTGAAAATTAAAATTATTAAATAGCGAAAATCAAAACATAATAATTTATTAGATAGTGAAATAAATTAAGGAAGTTGGTAATAAAAGTTTGTTGAGAGAAAGGTTTTTAGGTTGAAGAGAATGTGCTCAGAATTCAAGTATATGGGTGATGAAGTGGATGAAGAAAATGGCGAAGAAGCAGAGAATGTATCATTATCTTTATCTATTTACAGTCATCATTAAGAAATTGGATGAGAATTCAAACGTAGTTTGTCTCACATGTTTCATTAGCCACCAACAATCGGTTGTTGTTGGCCGCTATATATATATATATATATATATATATAGCCAAACCTCAACATTGGTCGTCACCTCCCTTCGCCGTCGATTCAATATGTGGGCTTGGGTCAGTTGCCGTTACCACTATATCGTCGACATCAATTTAATCGACTTTCAAAGGAGATCAATTTAATTTGGTTTTAAGAAATTAATAATCGCTTAAGTTTGGATGAGAAAAGATTATTGTTGTAAGATAATAATCCGAAAAATAGTTTCTAATTAAACTTAAACATATCATTGATACAATATTCCATAGAACCTTTGCATGATTGAAGTAATTAAGAAAATCAAAACTTTAGAATGATTTTGTCTTTTGAATGTCAATTTTTAGTTTACCTTTATTTTCTTTGTTCAACTCCAAAATCTATCTTTTGTTATGTGTAAGATGATAATATGCTTATTGCTAGCAAATCTAGAGAAGATTTGAAGAAGGTGAAGCTAGTTGTAAAAAATGAATTTGATATGAAGACTCTAGGTGAATCGAAGAGGATCTTAGTATTGATATCTACAGAAAAAGAAAGAAAAATAATATTCGTAGCCGTCAGTGTACCTACTGTCATAAAATTCTAGAGAGATTTGACTTGGAAGAGCTAATTAAATAAATTATGGTTTACATTTATGAGTCCTAATTAAATTAGTATCTTTCCTTTGTTAGTTATGTTGGTGTCGCTGTATATTTATTCTTCCATGTAAAAATATGTTGATTACATCAATTATTCAATAAAATACATAAAACAACATGCTACTAGAGTTGGATTCTTGTCTTATTCAACTTTAGGTGTCGCCGCTCTATTTGATAGGCCTTTGTCGATCTATTGTCAACTGTGGCAAATCCACGCAGATTTGTCCATTAACACAGTCCCGTCAACGGAGCCAGATCTCCTTAGTCCTGTAAACCTCAAATTTTTCGTGAACAACATTATCGACCTTAGATCCACCACGCACAACTTCATTGACCACAAATCTACCTCCCACATTTGTCATGTAACCCTTTGCTGCCCAAGTTTCTGTCAACGCCTTCCAAGTTTGTTCGATCCCGTTTCACCCAATCCACACCATCATTGTCTAGTGCGTTTTCCGTTTAAGGGTTCCAGATCTACTACGAATACGCTTCAGATTTGTCGTTGTCCACCTCTGTCCTGTCAAGCATCCATCATTAGTCCCATCTCTCGACCTACTTTCGCGCACTTCTCCCAACATGTCGCTCGTGTAGATTTGACCGCCACCGTTCTGCTCGTGAATCCACCATCATGTAGATGCTCTACTTCATCCAGACCTTTTGTTGACGATCAGATTGTACCATCTACTGCCACTACAGACCAGATTCTGCTGTTGATCTCTACTTGA ATGAGTCCCCACGTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAATCTTTCTCCACCACCCAATGAGTTGATCTTGCTTAGAATAGCACAAAATTGCTTTGAGCTGGCAAGAAATCAAGCTGGTTGCTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTCGAGAAGTCCTCATATCCCCGTTGATACAAGATGTAGATAATCTTTCAATACATCCTTACGGGAATTATGTAATTCAATATATGATTCAATTGGATGGAGCAAACATAGGATGGAGGATAATCAATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTATATTATCTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACAAATCAATATGGCAATTATGTTGTCCAGACAGCCATGTCGGTGGCTAAGGGAAATGCTCATAGGTTACTTGAAAGAACCATTAAGAGCCATTGGTTTGTTCTTCAATTCCATCCATATGGAAAAAATGTGATTGCATCGGCCAAACGTGTCGCCGCTCTATTTGATAGGCCTTTGTCGATCTATTGTCAACTGTGGCAAATCCACGCAGATTTGTCCATTAACACAGTCCCGTCAACGGAGCCAGATCTCCTTAGTCCTGTAAACCTCAAATTTTTCGTGAACAACATTATCGACCTTAGATCCACCACGCACAACTTCATTGACCACAAATCTACCTCCCACATTTGTCATGTAACCCTTTGCTGCCCAAGTTTCTGTCAACGCCTTCCAAGTTTGTTCGATCCCGTTTCACCCAATCCACACCATCATTGTCTAGTGCGTTTTCCGTTTAAGGGTTCCAGATCTACTACGAATACGCTTCAGATTTGTCGTTGTCCACCTCTGTCCTGTCAAGCATCCATCATTAGTCCCATCTCTCGACCTACTTTCGCGCACTTCTCCCAACATGTCGCTCGTGTAGATTTGACCGCCACCGTTCTGCTCGTGAATCCACCATCATGTAGATGCTCTACTTCATCCAGACCTTTTGTTGACGATCAGATTGTACCATCTACTGCCACTACAGACCAGATTCTGCTGTTGATCTCTACTTGA ATGAGTCCCCACGTCCTAACTTTGGCTAAAGACTTCCAAGGTGGCCATCAAGTGCTACGGAGCTGCTTCTACAATCTTTCTCCACCACCCAATGAGTTGATCTTGCTTAGAATAGCACAAAATTGCTTTGAGCTGGCAAGAAATCAAGCTGGTTGCTGTATACTCCAAGAGTGCATTGAATATTCCAATGATAAATTAAGACAACTTCGAGAAGTCCTCATATCCCCGTTGATACAAGATGTAGATAATCTTTCAATACATCCTTACGGGAATTATGTAATTCAATATATGATTCAATTGGATGGAGCAAACATAGGATGGAGGATAATCAATGAACTTAAAAACAAATTTGTCGCACTTTCTATGGACAAGTTTGGAAGCAATGTGGTGGAAAAATGTCTATCTTGTTGTGAAGGTGGCTTTGACTATATTATCTATGAAATTTTAGAGAATAACAATGAAAATCAACTCCTTCAAATTTGTACAAATCAATATGGCAATTATGTTGTCCAGACAGCCATGTCGGTGGCTAAGGGAAATGCTCATAGGTTACTTGAAAGAACCATTAAGAGCCATTGGTTTGTTCTTCAATTCCATCCATATGGAAAAAATGTGATTGCATCGGCCAAACGTGTCGCCGCTCTATTTGATAGGCCTTTGTCGATCTATTGTCAACTGTGGCAAATCCACGCAGATTTGTCCATTAACACAGTCCCGTCAACGGAGCCAGATCTCCTTAGTCCTGTAAACCTCAAATTTTTCGTGAACAACATTATCGACCTTAGATCCACCACGCACAACTTCATTGACCACAAATCTACCTCCCACATTTGTCATGTAACCCTTTGCTGCCCAAGTTTCTGTCAACGCCTTCCAAGTTTGTTCGATCCCGTTTCACCCAATCCACACCATCATTGTCTAGTGCGTTTTCCGTTTAAGGGTTCCAGATCTACTACGAATACGCTTCAGATTTGTCGTTGTCCACCTCTGTCCTGTCAAGCATCCATCATTAGTCCCATCTCTCGACCTACTTTCGCGCACTTCTCCCAACATGTCGCTCGTGTAGATTTGACCGCCACCGTTCTGCTCGTGAATCCACCATCATGTAGATGCTCTACTTCATCCAGACCTTTTGTTGACGATCAGATTGTACCATCTACTGCCACTACAGACCAGATTCTGCTGTTGATCTCTACTTGA MSPHVLTLAKDFQGGHQVLRSCFYNLSPPPNELILLRIAQNCFELARNQAGCCILQECIEYSNDKLRQLREVLISPLIQDVDNLSIHPYGNYVIQYMIQLDGANIGWRIINELKNKFVALSMDKFGSNVVEKCLSCCEGGFDYIIYEILENNNENQLLQICTNQYGNYVVQTAMSVAKGNAHRLLERTIKSHWFVLQFHPYGKNVIASAKRVAALFDRPLSIYCQLWQIHADLSINTVPSTEPDLLSPVNLKFFVNNIIDLRSTTHNFIDHKSTSHICHVTLCCPSFCQRLPSLFDPVSPNPHHHCLVRFPFKGSRSTTNTLQICRCPPLSCQASIISPISRPTFAHFSQHVARVDLTATVLLVNPPSCRCSTSSRPFVDDQIVPSTATTDQILLLIST
BLAST of Cla016077 vs. Swiss-Prot
Match: PUM7_ARATH (Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana GN=APUM7 PE=3 SV=2) HSP 1 Score: 126.7 bits (317), Expect = 5.6e-28 Identity = 74/207 (35.75%), Postives = 117/207 (56.52%), Query Frame = 1
BLAST of Cla016077 vs. Swiss-Prot
Match: PUM12_ARATH (Pumilio homolog 12 OS=Arabidopsis thaliana GN=APUM12 PE=2 SV=2) HSP 1 Score: 125.6 bits (314), Expect = 1.3e-27 Identity = 75/204 (36.76%), Postives = 112/204 (54.90%), Query Frame = 1
BLAST of Cla016077 vs. Swiss-Prot
Match: PUM8_ARATH (Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana GN=APUM8 PE=3 SV=2) HSP 1 Score: 122.9 bits (307), Expect = 8.1e-27 Identity = 69/207 (33.33%), Postives = 117/207 (56.52%), Query Frame = 1
BLAST of Cla016077 vs. Swiss-Prot
Match: PUF4_YEAST (Pumilio homology domain family member 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PUF4 PE=1 SV=2) HSP 1 Score: 115.2 bits (287), Expect = 1.7e-24 Identity = 70/214 (32.71%), Postives = 116/214 (54.21%), Query Frame = 1
BLAST of Cla016077 vs. Swiss-Prot
Match: PUM9_ARATH (Pumilio homolog 9 OS=Arabidopsis thaliana GN=APUM9 PE=2 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 5.4e-23 Identity = 71/207 (34.30%), Postives = 108/207 (52.17%), Query Frame = 1
HSP 2 Score: 47.8 bits (112), Expect = 3.3e-04 Identity = 31/161 (19.25%), Postives = 76/161 (47.20%), Query Frame = 1
HSP 3 Score: 43.5 bits (101), Expect = 6.3e-03 Identity = 44/175 (25.14%), Postives = 74/175 (42.29%), Query Frame = 1
BLAST of Cla016077 vs. TrEMBL
Match: A0A0A0K7S4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071550 PE=4 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 1.4e-70 Identity = 133/180 (73.89%), Postives = 154/180 (85.56%), Query Frame = 1
BLAST of Cla016077 vs. TrEMBL
Match: W9SG11_9ROSA (Pumilio-12-like protein OS=Morus notabilis GN=L484_010253 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 2.5e-30 Identity = 78/212 (36.79%), Postives = 128/212 (60.38%), Query Frame = 1
BLAST of Cla016077 vs. TrEMBL
Match: M5XWB3_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024026mg PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 3.2e-30 Identity = 79/208 (37.98%), Postives = 130/208 (62.50%), Query Frame = 1
BLAST of Cla016077 vs. TrEMBL
Match: A0A022RBH3_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a020918mg PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 4.2e-30 Identity = 82/206 (39.81%), Postives = 118/206 (57.28%), Query Frame = 1
BLAST of Cla016077 vs. TrEMBL
Match: A0A067LC35_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16061 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 4.2e-30 Identity = 79/217 (36.41%), Postives = 136/217 (62.67%), Query Frame = 1
BLAST of Cla016077 vs. NCBI nr
Match: gi|700188633|gb|KGN43866.1| (hypothetical protein Csa_7G071550 [Cucumis sativus]) HSP 1 Score: 275.0 bits (702), Expect = 2.0e-70 Identity = 133/180 (73.89%), Postives = 154/180 (85.56%), Query Frame = 1
BLAST of Cla016077 vs. NCBI nr
Match: gi|659110995|ref|XP_008455521.1| (PREDICTED: putative pumilio homolog 8, chloroplastic [Cucumis melo]) HSP 1 Score: 227.6 bits (579), Expect = 3.7e-56 Identity = 106/134 (79.10%), Postives = 120/134 (89.55%), Query Frame = 1
BLAST of Cla016077 vs. NCBI nr
Match: gi|1009135460|ref|XP_015885003.1| (PREDICTED: putative pumilio homolog 8, chloroplastic isoform X2 [Ziziphus jujuba]) HSP 1 Score: 146.0 bits (367), Expect = 1.4e-31 Identity = 80/210 (38.10%), Postives = 129/210 (61.43%), Query Frame = 1
BLAST of Cla016077 vs. NCBI nr
Match: gi|1009135460|ref|XP_015885003.1| (PREDICTED: putative pumilio homolog 8, chloroplastic isoform X2 [Ziziphus jujuba]) HSP 1 Score: 50.4 bits (119), Expect = 8.2e-03 Identity = 45/199 (22.61%), Postives = 85/199 (42.71%), Query Frame = 1
HSP 2 Score: 141.4 bits (355), Expect = 3.5e-30 Identity = 78/212 (36.79%), Postives = 128/212 (60.38%), Query Frame = 1
BLAST of Cla016077 vs. NCBI nr
Match: gi|645226973|ref|XP_008220292.1| (PREDICTED: pumilio homolog 12-like [Prunus mume]) HSP 1 Score: 141.4 bits (355), Expect = 3.5e-30 Identity = 79/208 (37.98%), Postives = 130/208 (62.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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