MELO3C028587.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C028587.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Pumilio-like protein
Location	chr01 : 714942 .. 716782 (-)
Sequence length	1212

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTTAATGAAAGATAACGATAATCCAATGATTTCTAATGACGACGCTAATGATAGCGATATTAACGATAATCGTCACTTGTTCAGTGTTCTTCAACAACTTACAACAACACATCTTCATTGGGTGATTATTCATCCACTTGGAAATAAGTTTCTTCTGCATCTTCTTCAACCTCCTCATTGCCATCCAACCTTCATTAATCATCTTCTTCTCTCCTTAACCACTTATTCACGAGACCACTTTCTACCTATCTCTCTTCATTATCTCGGGTTAGTTCTTCATATATATTACTTAATTCTTTTTTATTATTTTCATTTGTAATTAATTCTCCGATGCATATCTAATTGATTCGTTAATCTTCGTCGTTAATCTTTTTGTACTATTATACAGATATCGAGTTGTGGTGACGTTAATCTCTCATCTCAAATACCCTTGTCAACAATGGATGATTGCATTGTTGATGAGTCCGCATGTACTGACTTTGGCTAAAGACTTTCAAGGTGGTCATCGAGTGATAAAGAGTTGCTTCCAAAGCTTTTCCCCACAACCTAATGAGGTAATGAGTCTTTATAATCAATTAAAATCATTGAAAGAAAGAAACAATAAGGGGATCTATATATATACTATCACATGAATGCAGTTGATCTTACTCAGAGTAGCACAAAATTGCTTGGAGTTGGCGAGAGAACAAGCCGGTTGTTGTATACTCCAAGAGTGCATTGAATATTCCAATAATAACTTCAGACAACTTCGAGAAGTTCTAATCACTCCGTTGATAGAAGATGCATATGATCTTTCAAAACATCCTTATGGGTAATTTCATTTCATTATCTTATATGCATGCATAGCTAGGGTTATTGTTTGAATTAATTATTGATTATATGTTAAGTGTTAATTGCAGGAACTATGTTATCCAATTTATGATTCAATTAGATGGAACAAACATAGGATGGAGAGTAATCAAAGAGCTTACACACAAATTTGTAGAACTTTCCATGGACAAGTATGGAAGCAATGTAGTGGAAAAGTGTGTCTGTCTTGTTGTGAAGATATCTCTAACTATGACATTATCTTTGAAATTTTGGAGGGTAACCATCGAGATCGATTCATCCAAATTTGTACAAATCAATATGGGAATTATGTTGTCCAAAAAGCCATGTCTATTGCTAAGGTTTGTTTTTAATTTTCCTCCTTAATTAATATATTCCTTTTCATTTTAATCTAAGAATTAGTGTAATCACAAAAGGTTAACTTATTCCTTAAAAATATTATATACTCGCTCGTTGTGTTTAATGTATAACAACGTAACTATATTTATTGAGAATGTCAAACATAAAGCCAACGGTACACATTGTTGCTAGATATAAGGGGAAAGGTCAACTAATAGAACGAGAGCATATGATCTCACCTCAAGTGAAAAGACAATATTGTATCATTACCTTTCATCGTCAAGATGTTTAAAGAATAATCATTACTCGTCCCTGACAATGTTTTTTTTACATCACAGGGAAGAATTCGTAAGTTGCTTGAAAAAGCCATTAAGCGTCACTGGCTTGTTCTTCAATGTCGTCCATATAGAAGAAATGTAATTTAATTTCATCAACTAAACGTGATAGAAGTCCAAATTATCGGAAGTACTTTTAAAGTAGGAATAGTTTTAGGAATATATTATATACATATAGATTGTTTTTATATATCTATATGTTTGAAGGTTGTTTGGAGTACACATATAATAATTAGCAAAAACAATGCTTATTGGGAAATGTTATTTGTATAGATGTGAGTATGTGAACTATGATTTATTCCTTAGGTTAGGCATATCATTGTTAAAGAATATT

mRNA sequence

ATGTTGTTAATGAAAGATAACGATAATCCAATGATTTCTAATGACGACGCTAATGATAGCGATATTAACGATAATCGTCACTTGTTCAGTGTTCTTCAACAACTTACAACAACACATCTTCATTGGGTGATTATTCATCCACTTGGAAATAAGTTTCTTCTGCATCTTCTTCAACCTCCTCATTGCCATCCAACCTTCATTAATCATCTTCTTCTCTCCTTAACCACTTATTCACGAGACCACTTTCTACCTATCTCTCTTCATTATCTCGGATATCGAGTTGTGGTGACGTTAATCTCTCATCTCAAATACCCTTGTCAACAATGGATGATTGCATTGTTGATGAGTCCGCATGTACTGACTTTGGCTAAAGACTTTCAAGGTGGTCATCGAGTGATAAAGAGTTGCTTCCAAAGCTTTTCCCCACAACCTAATGAGTTGATCTTACTCAGAGTAGCACAAAATTGCTTGGAGTTGGCGAGAGAACAAGCCGGTTGTTGTATACTCCAAGAGTGCATTGAATATTCCAATAATAACTTCAGACAACTTCGAGAAGTTCTAATCACTCCGTTGATAGAAGATGCATATGATCTTTCAAAACATCCTTATGGGAACTATGTTATCCAATTTATGATTCAATTAGATGGAACAAACATAGGATGGAGAGTAATCAAAGAGCTTACACACAAATTTGTAGAACTTTCCATGGACAAGTATGGAAGCAATGTAGTGGAAAAGTGTGTCTGTCTTGTTGTGAAGATATCTCTAACTATGACATTATCTTTGAAATTTTGGAGGGTAACCATCGAGATCGATTCATCCAAATTTGTACAAATCAATATGGGAATTATGTTGTCCAAAAAGCCATGTCTATTGCTAAGGGAAGAATTCGTAAGTTGCTTGAAAAAGCCATTAAGCGTCACTGGCTTGTTCTTCAATGTCGTCCATATAGAAGAAATGTAATTTAATTTCATCAACTAAACGTGATAGAAGTCCAAATTATCGGAAGTACTTTTAAAGTAGGAATAGTTTTAGGAATATATTATATACATATAGATTGTTTTTATATATCTATATGTTTGAAGGTTGTTTGGAGTACACATATAATAATTAGCAAAAACAATGCTTATTGGGAAATGTTATTTGTATAGATGTGAGTATGTGAACTATGATTTATTCCTTAGGTTAGGCATATCATTGTTAAAGAATATT

Coding sequence (CDS)

ATGTTGTTAATGAAAGATAACGATAATCCAATGATTTCTAATGACGACGCTAATGATAGCGATATTAACGATAATCGTCACTTGTTCAGTGTTCTTCAACAACTTACAACAACACATCTTCATTGGGTGATTATTCATCCACTTGGAAATAAGTTTCTTCTGCATCTTCTTCAACCTCCTCATTGCCATCCAACCTTCATTAATCATCTTCTTCTCTCCTTAACCACTTATTCACGAGACCACTTTCTACCTATCTCTCTTCATTATCTCGGATATCGAGTTGTGGTGACGTTAATCTCTCATCTCAAATACCCTTGTCAACAATGGATGATTGCATTGTTGATGAGTCCGCATGTACTGACTTTGGCTAAAGACTTTCAAGGTGGTCATCGAGTGATAAAGAGTTGCTTCCAAAGCTTTTCCCCACAACCTAATGAGTTGATCTTACTCAGAGTAGCACAAAATTGCTTGGAGTTGGCGAGAGAACAAGCCGGTTGTTGTATACTCCAAGAGTGCATTGAATATTCCAATAATAACTTCAGACAACTTCGAGAAGTTCTAATCACTCCGTTGATAGAAGATGCATATGATCTTTCAAAACATCCTTATGGGAACTATGTTATCCAATTTATGATTCAATTAGATGGAACAAACATAGGATGGAGAGTAATCAAAGAGCTTACACACAAATTTGTAGAACTTTCCATGGACAAGTATGGAAGCAATGTAGTGGAAAAGTGTGTCTGTCTTGTTGTGAAGATATCTCTAACTATGACATTATCTTTGAAATTTTGGAGGGTAACCATCGAGATCGATTCATCCAAATTTGTACAAATCAATATGGGAATTATGTTGTCCAAAAAGCCATGTCTATTGCTAAGGGAAGAATTCGTAAGTTGCTTGAAAAAGCCATTAAGCGTCACTGGCTTGTTCTTCAATGTCGTCCATATAGAAGAAATGTAA

Protein sequence

MLLMKDNDNPMISNDDANDSDINDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYGSNVVEKCVCLVVKISLTMTLSLKFWRVTIEIDSSKFVQINMGIMLSKKPCLLLREEFVSCLKKPLSVTGLFFNVVHIEEM

Homology

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BLAST of MELO3C028587.2.1 vs. NCBI nr
Match: XP_008455521.1 (PREDICTED: putative pumilio homolog 8, chloroplastic [Cucumis melo])

HSP 1 Score: 651.4 bits (1679), Expect = 1.6e-183
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MLLMKDNDNPMISNDDANDSDINDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPP 60
           MLLMKDNDNPMISNDDANDSDINDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPP
Sbjct: 1   MLLMKDNDNPMISNDDANDSDINDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPP 60

Query: 61  HCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVL 120
           HCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVL
Sbjct: 61  HCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVL 120

Query: 121 TLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNF 180
           TLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNF
Sbjct: 121 TLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNF 180

Query: 181 RQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYG 240
           RQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYG
Sbjct: 181 RQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYG 240

Query: 241 SNVVEKCVCLVVKISLTMTLSLKFWRVTIEIDSSKFVQINMGIMLSKKPCLLLREEFVSC 300
           SNVVEKCVCLVVKISLTMTLSLKFWRVTIEIDSSKFVQINMGIMLSKKPCLLLREEFVSC
Sbjct: 241 SNVVEKCVCLVVKISLTMTLSLKFWRVTIEIDSSKFVQINMGIMLSKKPCLLLREEFVSC 300

Query: 301 LKKPLSVTGLFFNVVHIEEM 321
           LKKPLSVTGLFFNVVHIEEM
Sbjct: 301 LKKPLSVTGLFFNVVHIEEM 320

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BLAST of MELO3C028587.2.1 vs. NCBI nr
Match: KGN43866.1 (hypothetical protein Csa_7G071550 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 2.1e-45
Identity = 93/110 (84.55%), Postives = 100/110 (90.91%), Query Frame = 0


Query: 146 ELILLRVAQNCLELAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGN 205
           +LI+LRVAQNCLELAR QA CCILQECIEYSNNN RQL+EVLI+PLI+D YDLSKHPYGN
Sbjct: 2   QLIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDLSKHPYGN 61

Query: 206 YVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYGSNVVEKCVCLVVKIS 256
           YVIQFMIQLDGTNIG R+IKELTHKFVELSMDKYGSNVVEKC+     IS
Sbjct: 62  YVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGIS 111

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BLAST of MELO3C028587.2.1 vs. NCBI nr
Match: XP_022148742.1 (pumilio homolog 12-like [Momordica charantia])

HSP 1 Score: 183.3 bits (464), Expect = 1.3e-42
Identity = 102/209 (48.80%), Postives = 138/209 (66.03%), Query Frame = 0


Query: 40  LHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLI 99
           +H +++HPLGN  +  L +   CH  FI  LLLSL    +D FL + LH LG + VV L+
Sbjct: 152 IHELMLHPLGNDVVQTLFR--FCHEYFIKDLLLSLIG-KQDLFLAVCLHSLGQKAVVKLL 211

Query: 100 SHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLEL 159
             L  P  Q + A+++S H + LAK    GH V+ +CF++ S Q NE+ILL +A N LEL
Sbjct: 212 CRLSNPQHQLLFAVVISHHGVALAKSSGPGHDVLINCFRNLSRQDNEMILLEIAHNSLEL 271

Query: 160 AREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNI 219
           A+++ GCCIL  CI Y+      LR VL+TPLI++A  LS H Y N+VIQF+I+LD  NI
Sbjct: 272 AKDKNGCCILPFCILYAEGT---LRGVLVTPLIQEARHLSTHFYANFVIQFLIELDQANI 331

Query: 220 GWRVIKELTHKFVELSMDKYGSNVVEKCV 249
           G RVI+ L +KFVEL + K GS+VVEKC+
Sbjct: 332 GARVIQVLRNKFVELCLSKAGSHVVEKCL 354

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BLAST of MELO3C028587.2.1 vs. NCBI nr
Match: XP_017246437.1 (PREDICTED: pumilio homolog 12-like [Daucus carota subsp. sativus] >KZM99832.1 hypothetical protein DCAR_012806 [Daucus carota subsp. sativus])

HSP 1 Score: 130.2 bits (326), Expect = 1.3e-26
Identity = 73/200 (36.50%), Postives = 116/200 (58.00%), Query Frame = 0


Query: 49  GNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQ 108
           GN F+  L+    C+      ++LS+T  S  HF+ +  +  G R + TL+ H+  P Q 
Sbjct: 220 GNNFVKKLI--GSCNEDQRTMIILSVTK-SVFHFISVCCNPHGTRGIQTLMEHVSSPHQV 279

Query: 109 WMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCI 168
            ++   +SP    LA+D   GH VI+ C   FS + N  I+  +A NC E+A  + GCC+
Sbjct: 280 SLLVAAISPSAAILARD-TNGHHVIQHCLTHFSNEYNLYIINNIASNCFEVATSKTGCCV 339

Query: 169 LQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELT 228
           +Q C+E S    RQ   VL++ +I  A  L++HP+GNYV+Q ++ L   +I   ++++L 
Sbjct: 340 MQLCVEKSLGVHRQ---VLVSEIIATAVHLAEHPFGNYVLQHLLGLKEPDITGSIVRQLQ 399

Query: 229 HKFVELSMDKYGSNVVEKCV 249
             F+ +S +KYGSNVVEKC+
Sbjct: 400 GSFLSISCNKYGSNVVEKCL 412

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BLAST of MELO3C028587.2.1 vs. NCBI nr
Match: XP_015866393.2 (pumilio homolog 12-like [Ziziphus jujuba])

HSP 1 Score: 128.3 bits (321), Expect = 4.8e-26
Identity = 77/215 (35.81%), Postives = 127/215 (59.07%), Query Frame = 0


Query: 39  HLHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTL 98
           +LH +++   GN  +  L++  + +   ++ +L+S+ + +   F  + +   G RVV  L
Sbjct: 67  NLHDLMVQQFGNYLIQKLIEVVNANQ--LSEILVSVIS-NEQRFKEVCIDEHGTRVVQKL 126

Query: 99  ISHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLE 158
           + +LK P QQ++    +S   + L K   G H VI+ CF   SP+ N+ +L  VA NCLE
Sbjct: 127 LGYLKVPEQQFLAMSAVSRITVALTKSSNGNH-VIQKCFAELSPEVNKPLLDEVAANCLE 186

Query: 159 LAREQAGCCILQECIEYS-----NNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQ 218
           +A +++GCCILQ C+ Y+          + ++ L+  +I +A  LS+HPYGNYV+Q +I 
Sbjct: 187 IATDKSGCCILQTCVSYACAAHHAPQTGEAKKRLLAEIISNAQILSEHPYGNYVVQLII- 246

Query: 219 LDGTNIGWRVIKELTHKFVELSMDKYGSNVVEKCV 249
             GT     ++ +L  K+V LSM+K+GSNVVEKC+
Sbjct: 247 APGTLPD--ILTQLRGKYVSLSMNKHGSNVVEKCL 274

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BLAST of MELO3C028587.2.1 vs. TAIR10
Match: AT1G22240.1 (pumilio 8)

HSP 1 Score: 115.2 bits (287), Expect = 7.7e-26
Identity = 68/210 (32.38%), Postives = 116/210 (55.24%), Query Frame = 0


Query: 39  HLHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTL 98
           H+  +++ P GN  +  LL    C+      ++L +T+      + ISL+  G RVV  L
Sbjct: 238 HVVELMMDPFGNYLMQKLLDV--CNEEQRTQIILMVTS-EPGQLIRISLNAYGTRVVQRL 297

Query: 99  ISHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLE 158
           +  +K   Q  ++   + P  L L +D  G H VI+ C Q  S + NE I     + C++
Sbjct: 298 VESIKTRKQISLVKSALRPGFLNLIRDLNGNH-VIQRCLQCLSTEDNEFIFEDATKFCID 357

Query: 159 LAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTN 218
           +A  + GCC+LQ+CI YS+      RE L+T +  ++  L++ PYGNY +QF+++L   +
Sbjct: 358 IATHRHGCCVLQKCIAYSSG---LQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFS 417

Query: 219 IGWRVIKELTHKFVELSMDKYGSNVVEKCV 249
               ++ +L   +VELSM K+ S++VE+C+
Sbjct: 418 AIAAMLAQLKGHYVELSMQKFSSHMVERCL 440

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BLAST of MELO3C028587.2.1 vs. TAIR10
Match: AT1G78160.1 (pumilio 7)

HSP 1 Score: 112.5 bits (280), Expect = 5.0e-25
Identity = 70/210 (33.33%), Postives = 114/210 (54.29%), Query Frame = 0


Query: 39  HLHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTL 98
           H+  +++ P GN  +  LL    C       ++L + T      + ISL+  G RVV  L
Sbjct: 373 HVVELMMDPFGNYLMQKLLDV--CTEEQRTQIVL-VATEEPGQLIRISLNAYGTRVVQRL 432

Query: 99  ISHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLE 158
           +  ++   Q  ++ L + P  L L KD  G H VI+ C Q  S + N+ I     + C E
Sbjct: 433 VETIRSGKQISLVKLALRPGFLDLIKDLNGNH-VIQRCLQCLSTEDNKFIFDAATKFCTE 492

Query: 159 LAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTN 218
           +A  + GCC+LQ+CI YS    RQ RE LI  +  ++  L++ P+GNY +QF+I+L   +
Sbjct: 493 IATHRHGCCVLQKCIAYS---MRQQREKLIAEISRNSLLLAQDPFGNYAVQFVIELRIPS 552

Query: 219 IGWRVIKELTHKFVELSMDKYGSNVVEKCV 249
               ++ +L   +V+LSM K+ S++VE+C+
Sbjct: 553 AVAMMLAQLKGHYVQLSMQKFSSHMVERCL 575

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BLAST of MELO3C028587.2.1 vs. TAIR10
Match: AT1G35730.1 (pumilio 9)

HSP 1 Score: 105.1 bits (261), Expect = 7.9e-23
Identity = 59/179 (32.96%), Postives = 100/179 (55.87%), Query Frame = 0


Query: 70  LLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVLTLAKDFQGG 129
           L++S+ T +    + I L+  G RVV  +I  +K   Q  ++   + P  L L KD  G 
Sbjct: 317 LIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPGFLALVKDLNGN 376

Query: 130 HRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNFRQLREVLIT 189
           H VI+SC Q+  P  NE +L    + C E+A  + GCC+LQ CI   +N+    RE L+ 
Sbjct: 377 H-VIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCI---SNSVGLQRERLVA 436

Query: 190 PLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYGSNVVEKCV 249
            +  ++  LS+ P+GNYV+Q++I    + +  +++ +    + EL+  K+ S+V+EKC+
Sbjct: 437 EISRNSLHLSQDPFGNYVVQYLIDQQVSAV--KLLVQFRMHYAELATQKFSSHVIEKCL 489

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BLAST of MELO3C028587.2.1 vs. TAIR10
Match: AT4G08840.1 (pumilio 11)

HSP 1 Score: 104.4 bits (259), Expect = 1.4e-22
Identity = 66/204 (32.35%), Postives = 113/204 (55.39%), Query Frame = 0


Query: 47  PLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPC 106
           P GN  +  L++   C+      +L+ LT+      + IS++  G RVV  LI  +    
Sbjct: 289 PFGNYLIQKLIEV--CNEEQRTQILIRLTS-KPGLLVKISINNYGTRVVQKLIETVTTKE 348

Query: 107 QQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGC 166
           Q  ++   + P  L+L ++  G H VI +C + FSP  N+ IL    + C+E+A  + GC
Sbjct: 349 QISLVKSALVPGFLSLFRELNGNH-VILNCLKFFSPNDNKFILEAATKFCIEIATTRHGC 408

Query: 167 CILQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQ--LDGTNIGWRVI 226
           C+LQ C+ YS     +  E L+  +  ++  L++ P+GNY++Q++I+  + G N    V+
Sbjct: 409 CVLQRCVSYS---VGEQHEKLVDEISRNSLLLAQDPFGNYLVQYIIEKKVGGVN----VL 468

Query: 227 KELTHKFVELSMDKYGSNVVEKCV 249
            EL   +V+L+  K+GS+VVEKC+
Sbjct: 469 FELRGNYVKLATQKFGSHVVEKCL 481

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BLAST of MELO3C028587.2.1 vs. TAIR10
Match: AT5G56510.1 (pumilio 12)

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-19
Identity = 64/233 (27.47%), Postives = 120/233 (51.50%), Query Frame = 0


Query: 18  NDSDINDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTY 77
           ++ D ND   +F+ +      ++  +++ P GN  +  LL+   C+      ++ S+T  
Sbjct: 300 SEKDGNDIEMIFNEI----IDYISELMMDPFGNYLVQKLLEV--CNEDQRMQIVHSITR- 359

Query: 78  SRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCF 137
                + IS    G R V  ++   K   +  +I   +   ++ L K+  G H V++ C 
Sbjct: 360 KPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKHGIVHLIKNVNGNH-VVQRCL 419

Query: 138 QSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYD 197
           Q   P   + +      +C+ELA ++ GCC+LQ+C+ YS     + ++ L++ +  +A  
Sbjct: 420 QYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEG---EQKQHLVSEIASNALL 479

Query: 198 LSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYGSNVVEKCVCL 251
           LS+ P+GNYV+Q++ +L      + ++++L   + ELSM K  SNVVEKC+ L
Sbjct: 480 LSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSNVVEKCLKL 521

[Close]

BLAST of MELO3C028587.2.1 vs. Swiss-Prot
Match: sp|Q9LM20|PUM8_ARATH (Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APUM8 PE=3 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-24
Identity = 68/210 (32.38%), Postives = 116/210 (55.24%), Query Frame = 0


Query: 39  HLHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTL 98
           H+  +++ P GN  +  LL    C+      ++L +T+      + ISL+  G RVV  L
Sbjct: 238 HVVELMMDPFGNYLMQKLLDV--CNEEQRTQIILMVTS-EPGQLIRISLNAYGTRVVQRL 297

Query: 99  ISHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLE 158
           +  +K   Q  ++   + P  L L +D  G H VI+ C Q  S + NE I     + C++
Sbjct: 298 VESIKTRKQISLVKSALRPGFLNLIRDLNGNH-VIQRCLQCLSTEDNEFIFEDATKFCID 357

Query: 159 LAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTN 218
           +A  + GCC+LQ+CI YS+      RE L+T +  ++  L++ PYGNY +QF+++L   +
Sbjct: 358 IATHRHGCCVLQKCIAYSSG---LQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFS 417

Query: 219 IGWRVIKELTHKFVELSMDKYGSNVVEKCV 249
               ++ +L   +VELSM K+ S++VE+C+
Sbjct: 418 AIAAMLAQLKGHYVELSMQKFSSHMVERCL 440

[Close]

BLAST of MELO3C028587.2.1 vs. Swiss-Prot
Match: sp|Q9C9R6|PUM7_ARATH (Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APUM7 PE=3 SV=2)

HSP 1 Score: 112.5 bits (280), Expect = 8.9e-24
Identity = 70/210 (33.33%), Postives = 114/210 (54.29%), Query Frame = 0


Query: 39  HLHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTL 98
           H+  +++ P GN  +  LL    C       ++L + T      + ISL+  G RVV  L
Sbjct: 373 HVVELMMDPFGNYLMQKLLDV--CTEEQRTQIVL-VATEEPGQLIRISLNAYGTRVVQRL 432

Query: 99  ISHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLE 158
           +  ++   Q  ++ L + P  L L KD  G H VI+ C Q  S + N+ I     + C E
Sbjct: 433 VETIRSGKQISLVKLALRPGFLDLIKDLNGNH-VIQRCLQCLSTEDNKFIFDAATKFCTE 492

Query: 159 LAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTN 218
           +A  + GCC+LQ+CI YS    RQ RE LI  +  ++  L++ P+GNY +QF+I+L   +
Sbjct: 493 IATHRHGCCVLQKCIAYS---MRQQREKLIAEISRNSLLLAQDPFGNYAVQFVIELRIPS 552

Query: 219 IGWRVIKELTHKFVELSMDKYGSNVVEKCV 249
               ++ +L   +V+LSM K+ S++VE+C+
Sbjct: 553 AVAMMLAQLKGHYVQLSMQKFSSHMVERCL 575

[Close]

BLAST of MELO3C028587.2.1 vs. Swiss-Prot
Match: sp|Q1PFN9|PUM9_ARATH (Pumilio homolog 9 OS=Arabidopsis thaliana OX=3702 GN=APUM9 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-21
Identity = 59/179 (32.96%), Postives = 100/179 (55.87%), Query Frame = 0


Query: 70  LLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVLTLAKDFQGG 129
           L++S+ T +    + I L+  G RVV  +I  +K   Q  ++   + P  L L KD  G 
Sbjct: 317 LIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPGFLALVKDLNGN 376

Query: 130 HRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNFRQLREVLIT 189
           H VI+SC Q+  P  NE +L    + C E+A  + GCC+LQ CI   +N+    RE L+ 
Sbjct: 377 H-VIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCI---SNSVGLQRERLVA 436

Query: 190 PLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYGSNVVEKCV 249
            +  ++  LS+ P+GNYV+Q++I    + +  +++ +    + EL+  K+ S+V+EKC+
Sbjct: 437 EISRNSLHLSQDPFGNYVVQYLIDQQVSAV--KLLVQFRMHYAELATQKFSSHVIEKCL 489

[Close]

BLAST of MELO3C028587.2.1 vs. Swiss-Prot
Match: sp|Q9LDW3|PUM11_ARATH (Pumilio homolog 11 OS=Arabidopsis thaliana OX=3702 GN=APUM11 PE=3 SV=2)

HSP 1 Score: 104.4 bits (259), Expect = 2.4e-21
Identity = 66/204 (32.35%), Postives = 113/204 (55.39%), Query Frame = 0


Query: 47  PLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPC 106
           P GN  +  L++   C+      +L+ LT+      + IS++  G RVV  LI  +    
Sbjct: 289 PFGNYLIQKLIEV--CNEEQRTQILIRLTS-KPGLLVKISINNYGTRVVQKLIETVTTKE 348

Query: 107 QQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGC 166
           Q  ++   + P  L+L ++  G H VI +C + FSP  N+ IL    + C+E+A  + GC
Sbjct: 349 QISLVKSALVPGFLSLFRELNGNH-VILNCLKFFSPNDNKFILEAATKFCIEIATTRHGC 408

Query: 167 CILQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQ--LDGTNIGWRVI 226
           C+LQ C+ YS     +  E L+  +  ++  L++ P+GNY++Q++I+  + G N    V+
Sbjct: 409 CVLQRCVSYS---VGEQHEKLVDEISRNSLLLAQDPFGNYLVQYIIEKKVGGVN----VL 468

Query: 227 KELTHKFVELSMDKYGSNVVEKCV 249
            EL   +V+L+  K+GS+VVEKC+
Sbjct: 469 FELRGNYVKLATQKFGSHVVEKCL 481

[Close]

BLAST of MELO3C028587.2.1 vs. Swiss-Prot
Match: sp|Q9LVC3|PUM12_ARATH (Pumilio homolog 12 OS=Arabidopsis thaliana OX=3702 GN=APUM12 PE=2 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 2.5e-18
Identity = 64/233 (27.47%), Postives = 120/233 (51.50%), Query Frame = 0


Query: 18  NDSDINDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTY 77
           ++ D ND   +F+ +      ++  +++ P GN  +  LL+   C+      ++ S+T  
Sbjct: 300 SEKDGNDIEMIFNEI----IDYISELMMDPFGNYLVQKLLEV--CNEDQRMQIVHSITR- 359

Query: 78  SRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCF 137
                + IS    G R V  ++   K   +  +I   +   ++ L K+  G H V++ C 
Sbjct: 360 KPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKHGIVHLIKNVNGNH-VVQRCL 419

Query: 138 QSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYD 197
           Q   P   + +      +C+ELA ++ GCC+LQ+C+ YS     + ++ L++ +  +A  
Sbjct: 420 QYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEG---EQKQHLVSEIASNALL 479

Query: 198 LSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYGSNVVEKCVCL 251
           LS+ P+GNYV+Q++ +L      + ++++L   + ELSM K  SNVVEKC+ L
Sbjct: 480 LSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSNVVEKCLKL 521

[Close]

BLAST of MELO3C028587.2.1 vs. TrEMBL
Match: tr|A0A1S3C139|A0A1S3C139_CUCME (putative pumilio homolog 8, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495672 PE=4 SV=1)

HSP 1 Score: 651.4 bits (1679), Expect = 1.1e-183
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MLLMKDNDNPMISNDDANDSDINDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPP 60
           MLLMKDNDNPMISNDDANDSDINDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPP
Sbjct: 1   MLLMKDNDNPMISNDDANDSDINDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPP 60

Query: 61  HCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVL 120
           HCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVL
Sbjct: 61  HCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVL 120

Query: 121 TLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNF 180
           TLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNF
Sbjct: 121 TLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNF 180

Query: 181 RQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYG 240
           RQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYG
Sbjct: 181 RQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYG 240

Query: 241 SNVVEKCVCLVVKISLTMTLSLKFWRVTIEIDSSKFVQINMGIMLSKKPCLLLREEFVSC 300
           SNVVEKCVCLVVKISLTMTLSLKFWRVTIEIDSSKFVQINMGIMLSKKPCLLLREEFVSC
Sbjct: 241 SNVVEKCVCLVVKISLTMTLSLKFWRVTIEIDSSKFVQINMGIMLSKKPCLLLREEFVSC 300

Query: 301 LKKPLSVTGLFFNVVHIEEM 321
           LKKPLSVTGLFFNVVHIEEM
Sbjct: 301 LKKPLSVTGLFFNVVHIEEM 320

[Close]

BLAST of MELO3C028587.2.1 vs. TrEMBL
Match: tr|A0A0A0K7S4|A0A0A0K7S4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071550 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.4e-45
Identity = 93/110 (84.55%), Postives = 100/110 (90.91%), Query Frame = 0


Query: 146 ELILLRVAQNCLELAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGN 205
           +LI+LRVAQNCLELAR QA CCILQECIEYSNNN RQL+EVLI+PLI+D YDLSKHPYGN
Sbjct: 2   QLIILRVAQNCLELARGQASCCILQECIEYSNNNLRQLQEVLISPLIQDVYDLSKHPYGN 61

Query: 206 YVIQFMIQLDGTNIGWRVIKELTHKFVELSMDKYGSNVVEKCVCLVVKIS 256
           YVIQFMIQLDGTNIG R+IKELTHKFVELSMDKYGSNVVEKC+     IS
Sbjct: 62  YVIQFMIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGIS 111

[Close]

BLAST of MELO3C028587.2.1 vs. TrEMBL
Match: tr|A0A162AE57|A0A162AE57_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_012806 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 8.4e-27
Identity = 73/200 (36.50%), Postives = 116/200 (58.00%), Query Frame = 0


Query: 49  GNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDHFLPISLHYLGYRVVVTLISHLKYPCQQ 108
           GN F+  L+    C+      ++LS+T  S  HF+ +  +  G R + TL+ H+  P Q 
Sbjct: 220 GNNFVKKLI--GSCNEDQRTMIILSVTK-SVFHFISVCCNPHGTRGIQTLMEHVSSPHQV 279

Query: 109 WMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFSPQPNELILLRVAQNCLELAREQAGCCI 168
            ++   +SP    LA+D   GH VI+ C   FS + N  I+  +A NC E+A  + GCC+
Sbjct: 280 SLLVAAISPSAAILARD-TNGHHVIQHCLTHFSNEYNLYIINNIASNCFEVATSKTGCCV 339

Query: 169 LQECIEYSNNNFRQLREVLITPLIEDAYDLSKHPYGNYVIQFMIQLDGTNIGWRVIKELT 228
           +Q C+E S    RQ   VL++ +I  A  L++HP+GNYV+Q ++ L   +I   ++++L 
Sbjct: 340 MQLCVEKSLGVHRQ---VLVSEIIATAVHLAEHPFGNYVLQHLLGLKEPDITGSIVRQLQ 399

Query: 229 HKFVELSMDKYGSNVVEKCV 249
             F+ +S +KYGSNVVEKC+
Sbjct: 400 GSFLSISCNKYGSNVVEKCL 412

[Close]

BLAST of MELO3C028587.2.1 vs. TrEMBL
Match: tr|A0A1R3HUF5|A0A1R3HUF5_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_17055 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 6.0e-25
Identity = 70/228 (30.70%), Postives = 129/228 (56.58%), Query Frame = 0


Query: 22  INDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDH 81
           +ND + +  +  ++    LH +++H   N  +  L +  + +      LL+ L   +   
Sbjct: 210 VNDEKEIDMIFSEV-KDQLHELMVHQFANFLIQKLFEAGNQNQR--TELLVWLVK-NEQS 269

Query: 82  FLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFS 141
           F+ +  H  G R V  ++  +  P Q  ++  ++ P  + L K+   GH +I+ C Q FS
Sbjct: 270 FMDVCTHSTGTRAVQKIMEWISIPNQISILLSVLKPAAVALTKNAH-GHHIIERCLQIFS 329

Query: 142 PQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYDLSKH 201
            +  E ++  + ++CLE+A +++GCC+LQ+C+  S     + +E L+  +  +A+ LS+H
Sbjct: 330 IEEAEPLVDEIVEHCLEIATDKSGCCVLQQCLARSK---EEAKERLLVDITANAFVLSEH 389

Query: 202 PYGNYVIQFMIQL-DGTNIGWRVIKELTHKFVELSMDKYGSNVVEKCV 249
           PYGNYV+QF++ L +  ++   +I +L   +V LSM+KYGSNVVEKC+
Sbjct: 390 PYGNYVVQFVLGLREVPHVRANIIVQLRGSYVTLSMNKYGSNVVEKCL 429

[Close]

BLAST of MELO3C028587.2.1 vs. TrEMBL
Match: tr|A0A1R3GYZ0|A0A1R3GYZ0_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_32563 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 2.3e-24
Identity = 69/228 (30.26%), Postives = 129/228 (56.58%), Query Frame = 0


Query: 22  INDNRHLFSVLQQLTTTHLHWVIIHPLGNKFLLHLLQPPHCHPTFINHLLLSLTTYSRDH 81
           +ND + +  +  ++    LH +++H   N  +  L +  + +      LL+ L   +   
Sbjct: 212 VNDEKEIDMIFSEV-KDQLHELMVHQFANFLIQKLFEAGNENQR--TELLVWLVK-NEQS 271

Query: 82  FLPISLHYLGYRVVVTLISHLKYPCQQWMIALLMSPHVLTLAKDFQGGHRVIKSCFQSFS 141
           F+ +  H  G R V  ++  +  P Q  ++  ++ P  + L K+   GH +I+ C Q FS
Sbjct: 272 FMDVCTHSTGTRAVQKIMEWISTPDQIAILLSVLKPAAVALTKNAH-GHHIIERCLQIFS 331

Query: 142 PQPNELILLRVAQNCLELAREQAGCCILQECIEYSNNNFRQLREVLITPLIEDAYDLSKH 201
            +  E ++  + ++CLE+A +++GCC+LQ+C+  +     + +E L+  +  +A+ LS+H
Sbjct: 332 IEEAEPLVDEIVEHCLEIATDKSGCCVLQQCLARTK---EEAKERLLVDITTNAFVLSEH 391

Query: 202 PYGNYVIQFMIQL-DGTNIGWRVIKELTHKFVELSMDKYGSNVVEKCV 249
           PYGNYV+QF++ L +  ++   +I +L   +V LSM+KYGSNVVEKC+
Sbjct: 392 PYGNYVVQFVLGLREVPHVRANIIVQLRGSYVTLSMNKYGSNVVEKCL 431

The following BLAST results are available for this feature:

BLAST of MELO3C028587.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455521.1	1.6e-183	100.00	PREDICTED: putative pumilio homolog 8, chloroplastic [Cucumis melo]	[more]
KGN43866.1	2.1e-45	84.55	hypothetical protein Csa_7G071550 [Cucumis sativus]	[more]
XP_022148742.1	1.3e-42	48.80	pumilio homolog 12-like [Momordica charantia]	[more]
XP_017246437.1	1.3e-26	36.50	PREDICTED: pumilio homolog 12-like [Daucus carota subsp. sativus] >KZM99832.1 hy...	[more]
XP_015866393.2	4.8e-26	35.81	pumilio homolog 12-like [Ziziphus jujuba]	[more]

BLAST of MELO3C028587.2.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G22240.1	7.7e-26	32.38	pumilio 8	[more]
AT1G78160.1	5.0e-25	33.33	pumilio 7	[more]
AT1G35730.1	7.9e-23	32.96	pumilio 9	[more]
AT4G08840.1	1.4e-22	32.35	pumilio 11	[more]
AT5G56510.1	1.4e-19	27.47	pumilio 12	[more]

BLAST of MELO3C028587.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LM20\|PUM8_ARATH	1.4e-24	32.38	Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APU...	[more]
sp\|Q9C9R6\|PUM7_ARATH	8.9e-24	33.33	Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APU...	[more]
sp\|Q1PFN9\|PUM9_ARATH	1.4e-21	32.96	Pumilio homolog 9 OS=Arabidopsis thaliana OX=3702 GN=APUM9 PE=2 SV=1	[more]
sp\|Q9LDW3\|PUM11_ARATH	2.4e-21	32.35	Pumilio homolog 11 OS=Arabidopsis thaliana OX=3702 GN=APUM11 PE=3 SV=2	[more]
sp\|Q9LVC3\|PUM12_ARATH	2.5e-18	27.47	Pumilio homolog 12 OS=Arabidopsis thaliana OX=3702 GN=APUM12 PE=2 SV=2	[more]

BLAST of MELO3C028587.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C139\|A0A1S3C139_CUCME	1.1e-183	100.00	putative pumilio homolog 8, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10349567...	[more]
tr\|A0A0A0K7S4\|A0A0A0K7S4_CUCSA	1.4e-45	84.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071550 PE=4 SV=1	[more]
tr\|A0A162AE57\|A0A162AE57_DAUCA	8.4e-27	36.50	Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_012806 ...	[more]
tr\|A0A1R3HUF5\|A0A1R3HUF5_COCAP	6.0e-25	30.70	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_17055 PE=4 ...	[more]
tr\|A0A1R3GYZ0\|A0A1R3GYZ0_9ROSI	2.3e-24	30.26	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_32563 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR033133	PUM-HD
IPR011989	ARM-like
IPR001313	Pumilio_RNA-bd_rpt

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005488	binding
molecular_function	GO:0003723	RNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C028587.2	MELO3C028587.2	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C028587.2.1	MELO3C028587.2.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C028587.2.1.exon.5	MELO3C028587.2.1.exon.5	exon
MELO3C028587.2.1.exon.4	MELO3C028587.2.1.exon.4	exon
MELO3C028587.2.1.exon.3	MELO3C028587.2.1.exon.3	exon
MELO3C028587.2.1.exon.2	MELO3C028587.2.1.exon.2	exon
MELO3C028587.2.1.exon.1	MELO3C028587.2.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C028587.2.1.CDS.5	MELO3C028587.2.1.CDS.5	CDS
MELO3C028587.2.1.CDS.4	MELO3C028587.2.1.CDS.4	CDS
MELO3C028587.2.1.CDS.3	MELO3C028587.2.1.CDS.3	CDS
MELO3C028587.2.1.CDS.2	MELO3C028587.2.1.CDS.2	CDS
MELO3C028587.2.1.CDS.1	MELO3C028587.2.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C028587.2.1.three_prime_UTR.1	MELO3C028587.2.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001313	Pumilio RNA-binding repeat	SMART	SM00025	pum_5	coord: 190..224 e-value: 5.6 score: 14.7 coord: 114..150 e-value: 73.0 score: 6.2 coord: 77..112 e-value: 370.0 score: 0.8 coord: 226..261 e-value: 9.0 score: 13.2 coord: 151..188 e-value: 19.0 score: 10.6
IPR001313	Pumilio RNA-binding repeat	PFAM	PF00806	PUF	coord: 195..213 e-value: 1.9E-4 score: 20.9
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 190..225 score: 7.894
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 226..261 score: 8.291
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 73..112 score: 4.768
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 151..189 score: 8.127
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 15..301 e-value: 2.4E-47 score: 163.7
None	No IPR available	PANTHER	PTHR12537:SF64	PUMILIO HOMOLOG 11-RELATED	coord: 40..248
None	No IPR available	PANTHER	PTHR12537	RNA BINDING PROTEIN PUMILIO-RELATED	coord: 40..248
IPR033133	Pumilio homology domain	PROSITE	PS50303	PUM_HD	coord: 1..320 score: 20.238
IPR016024	Armadillo-type fold	SUPERFAMILY	SSF48371	ARM repeat	coord: 35..249