MELO3C025771.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCTTGGATCTAACTCCAATATTCAAATTTTCCCTCACCGACTTAACAAAAATTCCCTTTTCAGATTCTCAAAATCTTCGCAAATTCTTCTCCTCACTACGAAAATGGCGAAAACCATTCATCTCTCTTGTCTTCTTTTCATCTTCCTTTCCCTGTTCATCAATGTCTCTTTCTCTTTGGAACTATCGCACCAACTTCCTCCATCTACGTCTCCTGTAAATTCTCCTCCACTACCATCTCCTACTCCATTCCCTAATGTTCCAGCCAGTTCTCCGGCCGAATCTCCTCTCCATTCTCCTCCTGCGCCTCCTCCTTCAGATCTCCCTCCCACTCCATCTCCAGCGCCTGTTCTTTCTCCTGCACCCACTCCTTCTCATTCTCTAGCGGCCGATAGTGATTCCGGTAATATTACTTCCGGTGGCGGTGGAGAAGACTCCGAAGTCTCTAAAGGCGGGATGAATGGAGGAAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCGGCACTGTGTTTTGTTGGAATTGGAGGATTTGTGTACAAGAAGCGTCAGGATAACATTCGTCGATCTCAGTACGGGAGTGCTGCTAGGTCTTCGTTTTTGTGAGTTATTTGGAATTGAATGGCCATGGTACGGAAATCTCTGCTTAATTAGAAACGGATAGCAGTTCTATTGATTAAACAGCATTATCATTTTATTTTGACTGCGTAGTTTCGTAAACTCGTTTTATTAGAAACGGATAGCAGTCCTATTGTTTAGGAGGAGGTTGTTAGTAGCATTTCGATTTATTAGATGATTTTGAGTAGTAGTGTGATTACTTTTCCATACGATAGTTCTTAGCTTCTTGCTCAATCAGTTCGGCATTGCCGATTTCTTTGTCATTCTGCTTTGTTTCCAAACTTTTCTTTACTATATATAGTGTATCTTCTGCCTGCCTCATTTATCTCTTGTTTAATTGCTCAGAAATTTGAGGAATTATATATTTATAG GCTTGGATCTAACTCCAATATTCAAATTTTCCCTCACCGACTTAACAAAAATTCCCTTTTCAGATTCTCAAAATCTTCGCAAATTCTTCTCCTCACTACGAAAATGGCGAAAACCATTCATCTCTCTTGTCTTCTTTTCATCTTCCTTTCCCTGTTCATCAATGTCTCTTTCTCTTTGGAACTATCGCACCAACTTCCTCCATCTACGTCTCCTGTAAATTCTCCTCCACTACCATCTCCTACTCCATTCCCTAATGTTCCAGCCAGTTCTCCGGCCGAATCTCCTCTCCATTCTCCTCCTGCGCCTCCTCCTTCAGATCTCCCTCCCACTCCATCTCCAGCGCCTGTTCTTTCTCCTGCACCCACTCCTTCTCATTCTCTAGCGGCCGATAGTGATTCCGGTAATATTACTTCCGGTGGCGGTGGAGAAGACTCCGAAGTCTCTAAAGGCGGGATGAATGGAGGAAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCGGCACTGTGTTTTGTTGGAATTGGAGGATTTGTGTACAAGAAGCGTCAGGATAACATTCGTCGATCTCAGTACGGGAGTGCTGCTAGGTCTTCGTTTTTGTGAGTTATTTGGAATTGAATGGCCATGGTACGGAAATCTCTGCTTAATTAGAAACGGATAGCAGTTCTATTGATTAAACAGCATTATCATTTTATTTTGACTGCGTAGTTTCGTAAACTCGTTTTATTAGAAACGGATAGCAGTCCTATTGTTTAGGAGGAGGTTGTTAGTAGCATTTCGATTTATTAGATGATTTTGAGTAGTAGTGTGATTACTTTTCCATACGATAGTTCTTAGCTTCTTGCTCAATCAGTTCGGCATTGCCGATTTCTTTGTCATTCTGCTTTGTTTCCAAACTTTTCTTTACTATATATAGTGTATCTTCTGCCTGCCTCATTTATCTCTTGTTTAATTGCTCAGAAATTTGAGGAATTATATATTTATAG CTTGGATCTAACTCCAATATTCAAATTTTCCCTCACCGACTTAACAAAAATTCCCTTTTCAGATTCTCAAAATCTTCGCAAATTCTTCTCCTCACTACGAAAATGGCGAAAACCATTCATCTCTCTTGTCTTCTTTTCATCTTCCTTTCCCTGTTCATCAATGTCTCTTTCTCTTTGGAACTATCGCACCAACTTCCTCCATCTACGTCTCCTGTAAATTCTCCTCCACTACCATCTCCTACTCCATTCCCTAATGTTCCAGCCAGTTCTCCGGCCGAATCTCCTCTCCATTCTCCTCCTGCGCCTCCTCCTTCAGATCTCCCTCCCACTCCATCTCCAGCGCCTGTTCTTTCTCCTGCACCCACTCCTTCTCATTCTCTAGCGGCCGATAGTGATTCCGGTAATATTACTTCCGGTGGCGGTGGAGAAGACTCCGAAGTCTCTAAAGGCGGGATGAATGGAGGAAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCGGCACTGTGTTTTGTTGGAATTGGAGGATTTGTGTACAAGAAGCGTCAGGATAACATTCGTCGATCTCAGTACGGGAGTGCTGCTAGGTCTTCGTTTTTGTGA LGSNSNIQIFPHRLNKNSLFRFSKSSQILLLTTKMAKTIHLSCLLFIFLSLFINVSFSLELSHQLPPSTSPVNSPPLPSPTPFPNVPASSPAESPLHSPPAPPPSDLPPTPSPAPVLSPAPTPSHSLAADSDSGNITSGGGGEDSEVSKGGMNGGKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL
BLAST of MELO3C025771.2 vs. NCBI nr
Match: XP_008463942.2 (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis melo]) HSP 1 Score: 141.0 bits (354), Expect = 4.5e-30 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of MELO3C025771.2 vs. NCBI nr
Match: XP_011656995.1 (PREDICTED: proline-rich receptor-like protein kinase PERK9 [Cucumis sativus] >KGN46836.1 hypothetical protein Csa_6G140840 [Cucumis sativus]) HSP 1 Score: 127.9 bits (320), Expect = 3.9e-26 Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 0
BLAST of MELO3C025771.2 vs. NCBI nr
Match: XP_022986136.1 (proline-rich receptor-like protein kinase PERK12 [Cucurbita maxima]) HSP 1 Score: 108.2 bits (269), Expect = 3.2e-20 Identity = 58/70 (82.86%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of MELO3C025771.2 vs. NCBI nr
Match: XP_022995398.1 (lysine-rich arabinogalactan protein 18-like [Cucurbita maxima]) HSP 1 Score: 104.8 bits (260), Expect = 3.5e-19 Identity = 55/65 (84.62%), Postives = 60/65 (92.31%), Query Frame = 0
BLAST of MELO3C025771.2 vs. NCBI nr
Match: XP_022958106.1 (lysine-rich arabinogalactan protein 18-like [Cucurbita moschata]) HSP 1 Score: 95.9 bits (237), Expect = 1.6e-16 Identity = 47/52 (90.38%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of MELO3C025771.2 vs. TAIR10
Match: AT3G45230.1 (hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 72.0 bits (175), Expect = 4.6e-13 Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 0
BLAST of MELO3C025771.2 vs. TAIR10
Match: AT2G28440.1 (proline-rich family protein) HSP 1 Score: 43.9 bits (102), Expect = 1.3e-04 Identity = 27/65 (41.54%), Postives = 38/65 (58.46%), Query Frame = 0
BLAST of MELO3C025771.2 vs. TAIR10
Match: AT5G60630.1 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 43.1 bits (100), Expect = 2.3e-04 Identity = 20/34 (58.82%), Postives = 25/34 (73.53%), Query Frame = 0
BLAST of MELO3C025771.2 vs. TrEMBL
Match: tr|A0A1S3CKF5|A0A1S3CKF5_CUCME (pollen-specific leucine-rich repeat extensin-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103501947 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 3.0e-30 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of MELO3C025771.2 vs. TrEMBL
Match: tr|A0A0A0KGE9|A0A0A0KGE9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G140840 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 2.6e-26 Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 0
BLAST of MELO3C025771.2 vs. TrEMBL
Match: tr|A0A2P5FTY5|A0A2P5FTY5_9ROSA (Hydroxyproline-rich glycoprotein family protein OS=Trema orientalis OX=63057 GN=TorRG33x02_030090 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 7.8e-15 Identity = 45/58 (77.59%), Postives = 47/58 (81.03%), Query Frame = 0
BLAST of MELO3C025771.2 vs. TrEMBL
Match: tr|A0A2P5R992|A0A2P5R992_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD19718 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.2e-12 Identity = 41/59 (69.49%), Postives = 45/59 (76.27%), Query Frame = 0
BLAST of MELO3C025771.2 vs. TrEMBL
Match: tr|A0A2P5DU49|A0A2P5DU49_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_031340 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.2e-12 Identity = 45/69 (65.22%), Postives = 50/69 (72.46%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |