CmaCh20G004830 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh20G004830
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Unknown protein
Location	Cma_Chr20 : 2336483 .. 2336974 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAATTCATTGCTTTCTGTTGTTGTCTTCTTTTGATGAACGTCGCTTTCTCTTTGGAACAAACGGAGGAAGTTCCGCCATCTTCACCCCCTGAATCTGCTGTAAGTTTTCCTCCACTGTCCTCTCCTATTCCATTTCCTCACGTTCCGGCGAGTTCACCGGTGGAATCGCCTTTGCACTCTCCTCCTGCGCCTCCGCCCTCAGATCTCGTTCCCAGTCCATCTCCTGCGCGTGTTCCTTCTCCGTCACCGAATCTGGCCCCAACGCCAGCGGCCGATAGCGATTTCCGTAACAGCATTTCTAATAACGGTGGAGTAGAGTCAGAATCCTCCAAAGGAGGGATGAATGGAGGAAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCCGCAGCTTGTTTCGTTGGAATAGGAGGAATCGTGTACAAGAAGCGCCAAGACAACATTCGTCGATCTCAGTACGGGAACGCTGCTAGATCTTCGTTCTTATGA

mRNA sequence

ATGGCGAAATTCATTGCTTTCTGTTGTTGTCTTCTTTTGATGAACGTCGCTTTCTCTTTGGAACAAACGGAGGAAGTTCCGCCATCTTCACCCCCTGAATCTGCTGTAAGTTTTCCTCCACTGTCCTCTCCTATTCCATTTCCTCACGTTCCGGCGAGTTCACCGGTGGAATCGCCTTTGCACTCTCCTCCTGCGCCTCCGCCCTCAGATCTCGTTCCCAGTCCATCTCCTGCGCGTGTTCCTTCTCCGTCACCGAATCTGGCCCCAACGCCAGCGGCCGATAGCGATTTCCGTAACAGCATTTCTAATAACGGTGGAGTAGAGTCAGAATCCTCCAAAGGAGGGATGAATGGAGGAAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCCGCAGCTTGTTTCGTTGGAATAGGAGGAATCGTGTACAAGAAGCGCCAAGACAACATTCGTCGATCTCAGTACGGGAACGCTGCTAGATCTTCGTTCTTATGA

Coding sequence (CDS)

ATGGCGAAATTCATTGCTTTCTGTTGTTGTCTTCTTTTGATGAACGTCGCTTTCTCTTTGGAACAAACGGAGGAAGTTCCGCCATCTTCACCCCCTGAATCTGCTGTAAGTTTTCCTCCACTGTCCTCTCCTATTCCATTTCCTCACGTTCCGGCGAGTTCACCGGTGGAATCGCCTTTGCACTCTCCTCCTGCGCCTCCGCCCTCAGATCTCGTTCCCAGTCCATCTCCTGCGCGTGTTCCTTCTCCGTCACCGAATCTGGCCCCAACGCCAGCGGCCGATAGCGATTTCCGTAACAGCATTTCTAATAACGGTGGAGTAGAGTCAGAATCCTCCAAAGGAGGGATGAATGGAGGAAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCCGCAGCTTGTTTCGTTGGAATAGGAGGAATCGTGTACAAGAAGCGCCAAGACAACATTCGTCGATCTCAGTACGGGAACGCTGCTAGATCTTCGTTCTTATGA

Protein sequence

MAKFIAFCCCLLLMNVAFSLEQTEEVPPSSPPESAVSFPPLSSPIPFPHVPASSPVESPLHSPPAPPPSDLVPSPSPARVPSPSPNLAPTPAADSDFRNSISNNGGVESESSKGGMNGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQYGNAARSSFL

Homology

[Close]

BLAST of CmaCh20G004830 vs. TrEMBL
Match: A0A0A0KGE9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G140840 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 7.9e-44
Identity = 113/168 (67.26%), Postives = 125/168 (74.40%), Query Frame = 1


Query: 1   MAKFIAFCCCLLLM-----NVAFSLEQTEEVPPSSPPESAVSFPPLSSPIPFPHVPASSP 60
           M K I   C L +      NV+FSLEQ +++PPS  P   V+ PPL SP P PH PASSP
Sbjct: 1   MVKTIHLSCLLFIFVSLFNNVSFSLEQPQQLPPSPSP---VNSPPLPSPTPLPHAPASSP 60

Query: 61  VESPLHSPPAPPPSDLVPSPSPARVPSPSPNLAPTPAADSDFRNSISNNGGVESESSKGG 120
           VESPLHSPPAPPPSDL  +PSPA +  P  + + +PAADSD  N  S  GG +SE SKGG
Sbjct: 61  VESPLHSPPAPPPSDLPHTPSPAPLLPPVSSPSISPAADSDSSNITSGGGGEDSEVSKGG 120

Query: 121 MNGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQYGNAARSSFL 164
           MNGGKKAGIAVGVIAA CFVGIGG VYKKRQDNIRRSQYGNAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 165

[Close]

BLAST of CmaCh20G004830 vs. TrEMBL
Match: A0A0A0LS26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G084290 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-24
Identity = 82/167 (49.10%), Postives = 102/167 (61.08%), Query Frame = 1


Query: 1   MAKFIAFCCCLL----LMNVAFSLEQTEEVPPSSPPESAVSFPPLSSPIPFPHVPASSPV 60
           MAK  +FCC LL    LM V+ S +   +  P+ PPE+ V  PP  S       P +SP 
Sbjct: 1   MAKVASFCCALLSVLLLMQVSVSADSPAD-SPAPPPETGVDSPPPRSSSGISSPPDASPR 60

Query: 61  ESPLHSPPAPPPSDLVPSPSPARVPSPSPNLAPTPAADSDFRNSISNNGGVESESSKGGM 120
            +P+ SPP+PPPSDL P+ SP+  PS SP  +P P+  SDF  S   N     E SK GM
Sbjct: 61  NAPVRSPPSPPPSDLAPT-SPSPPPSSSPAPSPPPSEASDFGRSSVINEDESDEESKDGM 120

Query: 121 NGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQYGNAARSSFL 164
           +G +K GIA+GV+AA  F+G GG+VYKKRQDNIRRS YG  AR   L
Sbjct: 121 SGAQKFGIAIGVVAAVAFIGFGGVVYKKRQDNIRRSHYGYTARREIL 165

[Close]

BLAST of CmaCh20G004830 vs. TrEMBL
Match: B9SWB6_RICCO (Structural constituent of cell wall, putative OS=Ricinus communis GN=RCOM_0154160 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.5e-23
Identity = 83/177 (46.89%), Postives = 104/177 (58.76%), Query Frame = 1


Query: 3   KFIAFCCCLLLMNVAFSLEQTEEVPPSSPPESAVSFPPLSSPIPFPHVPASS-------- 62
           KF  F   LL +++  +   +   PP S P  +   PP  SP+     P+ S        
Sbjct: 5   KFFIFTFFLLFISIQLAFSASPPSPPDSSPSPSPEQPPSDSPLSPSPAPSPSSNISESPH 64

Query: 63  --PVESPLHSPPAPPPSDLVPSPSPARVPSP-----SPNLAP-TPAADSDFRNSISNNGG 122
             P +SP+ SPPAPPPSDL P+P+PA  PSP     SP  AP T  +D +  N++ ++GG
Sbjct: 65  LPPSDSPISSPPAPPPSDLTPAPTPASTPSPANSPDSPAPAPSTEVSDVNHSNNVESDGG 124

Query: 123 VESESSKGGMNGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQYGNAARSSFL 164
            E  S   G+N GKKAGIAVGVI AA  VG+G +VYKKRQDNIRRSQYG AAR   L
Sbjct: 125 EEKSS---GLNSGKKAGIAVGVIVAAGVVGVGALVYKKRQDNIRRSQYGYAARRELL 178

[Close]

BLAST of CmaCh20G004830 vs. TrEMBL
Match: B9HQ96_POPTR (Hydroxyproline-rich glycoprotein OS=Populus trichocarpa GN=POPTR_0009s01910g PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.2e-22
Identity = 81/166 (48.80%), Postives = 96/166 (57.83%), Query Frame = 1


Query: 11  LLLMNVAFSLEQTEEVPPSSPPESAVSFPP-----LSSPIPFPHVPASSPVESPLHSPPA 70
           L L+ ++ S  +T E  PS  P +  S  P     LS P+P P     SP +SPL SPPA
Sbjct: 13  LFLLQISSSSAETPEQSPSPSPSTEESAAPANSPFLSPPLPSPSPETGSPSDSPLASPPA 72

Query: 71  PPPSDLVPSPSPARVPSPSPNLAPTPAADSDFRNSI--------SNNGGVESESSKGGMN 130
           PPPSD VPS     VP  +P  APT  ++ +  N++        S   G E E    GM+
Sbjct: 73  PPPSDPVPSV----VPGSAPASAPTEGSEINHSNNVEAGSGGEGSGGDGSEGEGESKGMS 132

Query: 131 GGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQYGNAARSSFL 164
           GGKKAGI VGVI AAC VG GG+VYKKRQDNIRRS YG AAR   L
Sbjct: 133 GGKKAGIVVGVIVAACMVGFGGLVYKKRQDNIRRSDYGYAARREIL 174

[Close]

BLAST of CmaCh20G004830 vs. TrEMBL
Match: A0A067DGZ3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031492mg PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.2e-21
Identity = 84/158 (53.16%), Postives = 100/158 (63.29%), Query Frame = 1


Query: 8   CCCLLL-MNVAFSLEQTEEVPPSSPPESAVSFPPLSSPIPFPHVPASSPVESPLHSPPAP 67
           C CLLL ++   SL+     P  SP   A S  P  SP P    P  +P  S + SPPAP
Sbjct: 8   CFCLLLSLHYVVSLDS----PAPSPEHPADS--PAPSPGPVSVSPHHAPEISSISSPPAP 67

Query: 68  PPSDLVPSPSPARVPSPSPNLAPTPAADSDFRNSISNNGGVESESSK-GGMNGGKKAGIA 127
           PPSDL  +PSP+  P+PSP+ AP PA  SD  +S  N  GV S     GGM+GGKKAGIA
Sbjct: 68  PPSDLSSAPSPSP-PAPSPDPAPAPAEVSDLNHSNINADGVGSSGGDDGGMSGGKKAGIA 127

Query: 128 VGVIAAACFVGIGGIVYKKRQDNIRRSQYGNAARSSFL 164
           +GVI  AC V +GG+VYKKRQDNIRR+QYG AAR+  L
Sbjct: 128 LGVILVACVVVVGGLVYKKRQDNIRRAQYGYAARTELL 158

[Close]

BLAST of CmaCh20G004830 vs. TAIR10
Match: AT3G45230.1 (AT3G45230.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 79.3 bits (194), Expect = 2.4e-15
Identity = 65/134 (48.51%), Postives = 78/134 (58.21%), Query Frame = 1


Query: 29  SSPPESAVSFPPLSSPIPFP---HVPASSPVESPLHSPPAPPPSDLVPSPSPARVPSPSP 88
           +SP ES + +   SSP P P   H P+ SP  SP  SPP P  S    SPS +  PSPSP
Sbjct: 51  NSPAESPIEY---SSP-PEPETEHSPSPSPANSPSVSPPLPNDSQ---SPSSSASPSPSP 110

Query: 89  NLAPTPAADSDFRNSISNNGGVESESSKGGMNGGKKAGIAVGVIAAACFVGIGGIVYKKR 148
                 A+D +  +     G      S GGM+GGKK G+A G IAA C VG+ G VYKKR
Sbjct: 111 E-----ASDVNHSDITGIEGEKLPSGSGGGMSGGKKVGVAFGAIAAVCVVGVAGFVYKKR 170

Query: 149 QDNIRRSQYGNAAR 160
           Q+NIRRS+YG AAR
Sbjct: 171 QENIRRSRYGYAAR 172

[Close]

BLAST of CmaCh20G004830 vs. TAIR10
Match: AT2G28440.1 (AT2G28440.1 proline-rich family protein)

HSP 1 Score: 61.6 bits (148), Expect = 5.1e-10
Identity = 64/163 (39.26%), Postives = 79/163 (48.47%), Query Frame = 1


Query: 27  PPSSPPESAVSFPPLSSP-IPFPHVPASSPVESPLH---SPPAPPPSDLVPS----PSPA 86
           PPSS PE+    PP SSP    P  PASSP    L    SPP PPP    PS    P PA
Sbjct: 106 PPSSSPEADSPLPPSSSPEANSPQSPASSPKPESLADSPSPPPPPPQPESPSSPSYPEPA 165

Query: 87  RVPSPS---------------PNLAPTPAADSDFRNSISNNGGVESESSKG---GMNGGK 146
            VP+PS               P+ AP+P          S+  G E    +G   GM+G +
Sbjct: 166 PVPAPSDDDSDDDPEPETEYFPSPAPSPELGMAQDIKASDAAGEELNDERGEDYGMSGLE 225

Query: 147 KAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQYGNAARSSFL 164
           KAGIA+G I     + IG +VYKKR+DN+ R++Y       FL
Sbjct: 226 KAGIAIGTILGVGAIVIGALVYKKRRDNMTRARYTYFTEGEFL 268

[Close]

BLAST of CmaCh20G004830 vs. TAIR10
Match: AT5G60630.1 (AT5G60630.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 48.1 bits (113), Expect = 5.9e-06
Identity = 44/112 (39.29%), Postives = 60/112 (53.57%), Query Frame = 1


Query: 52  ASSPVESPLHSPPAPPPSDLVPSPSPARVPSPSPNLAPTPAADSDFRNSISNNGGVESES 111
           +SS  +S     P+P  S+    PS +++         T + D ++ +S    G   S  
Sbjct: 37  SSSLPQSETEMSPSPTMSNDYDYPSSSQL---------TESNDLNYTDSTRPGGEEASVG 96

Query: 112 SKGGMNGGKKAGIAV-GVIAAACFVGIGGIVYKKRQDNIRRSQYGNAARSSF 163
            + G  GGKK GIAV G IAAA  VG GG V KKR++NIRRS+YG A+   F
Sbjct: 97  GENGGGGGKKTGIAVVGSIAAASMVGFGGYVLKKRRENIRRSRYGYASTEFF 139

[Close]

BLAST of CmaCh20G004830 vs. NCBI nr
Match: gi|659127889|ref|XP_008463942.1| (PREDICTED: classical arabinogalactan protein 5-like [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 3.5e-45
Identity = 116/168 (69.05%), Postives = 130/168 (77.38%), Query Frame = 1


Query: 1   MAKFIAFCCCL-----LLMNVAFSLEQTEEVPPSSPPESAVSFPPLSSPIPFPHVPASSP 60
           MAK I   C L     L +NV+FSLE + ++PPS+ P   V+ PPL SP PFP+VPASSP
Sbjct: 62  MAKTIHLSCLLFIFLSLFINVSFSLELSHQLPPSTSP---VNSPPLPSPTPFPNVPASSP 121

Query: 61  VESPLHSPPAPPPSDLVPSPSPARVPSPSPNLAPTPAADSDFRNSISNNGGVESESSKGG 120
            ESPLHSPPAPPPSDL P+PSPA V SP+P  + + AADSD  N  S  GG +SE SKGG
Sbjct: 122 AESPLHSPPAPPPSDLPPTPSPAPVLSPAPTPSHSLAADSDSGNITSGGGGEDSEVSKGG 181

Query: 121 MNGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQYGNAARSSFL 164
           MNGGKKAGIAVGVIAA CFVGIGG VYKKRQDNIRRSQYG+AARSSFL
Sbjct: 182 MNGGKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL 226

[Close]

BLAST of CmaCh20G004830 vs. NCBI nr
Match: gi|778713182|ref|XP_011656995.1| (PREDICTED: proline-rich receptor-like protein kinase PERK9 [Cucumis sativus])

HSP 1 Score: 184.9 bits (468), Expect = 1.1e-43
Identity = 113/168 (67.26%), Postives = 125/168 (74.40%), Query Frame = 1


Query: 1   MAKFIAFCCCLLLM-----NVAFSLEQTEEVPPSSPPESAVSFPPLSSPIPFPHVPASSP 60
           M K I   C L +      NV+FSLEQ +++PPS  P   V+ PPL SP P PH PASSP
Sbjct: 1   MVKTIHLSCLLFIFVSLFNNVSFSLEQPQQLPPSPSP---VNSPPLPSPTPLPHAPASSP 60

Query: 61  VESPLHSPPAPPPSDLVPSPSPARVPSPSPNLAPTPAADSDFRNSISNNGGVESESSKGG 120
           VESPLHSPPAPPPSDL  +PSPA +  P  + + +PAADSD  N  S  GG +SE SKGG
Sbjct: 61  VESPLHSPPAPPPSDLPHTPSPAPLLPPVSSPSISPAADSDSSNITSGGGGEDSEVSKGG 120

Query: 121 MNGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQYGNAARSSFL 164
           MNGGKKAGIAVGVIAA CFVGIGG VYKKRQDNIRRSQYGNAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 165

[Close]

BLAST of CmaCh20G004830 vs. NCBI nr
Match: gi|778658880|ref|XP_011653442.1| (PREDICTED: classical arabinogalactan protein 9-like [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 2.0e-24
Identity = 82/167 (49.10%), Postives = 102/167 (61.08%), Query Frame = 1


Query: 1   MAKFIAFCCCLL----LMNVAFSLEQTEEVPPSSPPESAVSFPPLSSPIPFPHVPASSPV 60
           MAK  +FCC LL    LM V+ S +   +  P+ PPE+ V  PP  S       P +SP 
Sbjct: 1   MAKVASFCCALLSVLLLMQVSVSADSPAD-SPAPPPETGVDSPPPRSSSGISSPPDASPR 60

Query: 61  ESPLHSPPAPPPSDLVPSPSPARVPSPSPNLAPTPAADSDFRNSISNNGGVESESSKGGM 120
            +P+ SPP+PPPSDL P+ SP+  PS SP  +P P+  SDF  S   N     E SK GM
Sbjct: 61  NAPVRSPPSPPPSDLAPT-SPSPPPSSSPAPSPPPSEASDFGRSSVINEDESDEESKDGM 120

Query: 121 NGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQYGNAARSSFL 164
           +G +K GIA+GV+AA  F+G GG+VYKKRQDNIRRS YG  AR   L
Sbjct: 121 SGAQKFGIAIGVVAAVAFIGFGGVVYKKRQDNIRRSHYGYTARREIL 165

[Close]

BLAST of CmaCh20G004830 vs. NCBI nr
Match: gi|659130679|ref|XP_008465291.1| (PREDICTED: classical arabinogalactan protein 9 [Cucumis melo])

HSP 1 Score: 119.0 bits (297), Expect = 7.7e-24
Identity = 83/172 (48.26%), Postives = 102/172 (59.30%), Query Frame = 1


Query: 1   MAKFIAFCCC----LLLMNVAFSLEQTEEVPPSSPPESAVSFPPLSSPIPFPHVPASSPV 60
           MAK  +FCC     LLLM V+ S +   E  P+ PP++ V  PP  +P      P +SP 
Sbjct: 1   MAKVASFCCAVLSVLLLMQVSVSADSPAE-SPAPPPQTGVDSPPPRAPSSISSPPDASPR 60

Query: 61  ESPLHSPPAPPPSDLVPSPSPARVP-----SPSPNLAPTPAADSDFRNSISNNGGVESES 120
            +P+ SPP+PPPSDL P  SP   P     SP+P+  P+ A+D    N IS N     E 
Sbjct: 61  NAPVSSPPSPPPSDLAPDSSPTSPPPPPSSSPAPSPPPSEASDVSRNNVISEN--ESDEE 120

Query: 121 SKGGMNGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQYGNAARSSFL 164
           SK GM+G KK GIA+GVIAA   +G GG+VYKKRQDNIRRS YG  AR   L
Sbjct: 121 SKDGMSGAKKFGIAIGVIAAVALIGFGGMVYKKRQDNIRRSHYGYTARREIL 169

[Close]

BLAST of CmaCh20G004830 vs. NCBI nr
Match: gi|255578862|ref|XP_002530285.1| (PREDICTED: classical arabinogalactan protein 10 [Ricinus communis])

HSP 1 Score: 115.9 bits (289), Expect = 6.5e-23
Identity = 83/177 (46.89%), Postives = 104/177 (58.76%), Query Frame = 1


Query: 3   KFIAFCCCLLLMNVAFSLEQTEEVPPSSPPESAVSFPPLSSPIPFPHVPASS-------- 62
           KF  F   LL +++  +   +   PP S P  +   PP  SP+     P+ S        
Sbjct: 5   KFFIFTFFLLFISIQLAFSASPPSPPDSSPSPSPEQPPSDSPLSPSPAPSPSSNISESPH 64

Query: 63  --PVESPLHSPPAPPPSDLVPSPSPARVPSP-----SPNLAP-TPAADSDFRNSISNNGG 122
             P +SP+ SPPAPPPSDL P+P+PA  PSP     SP  AP T  +D +  N++ ++GG
Sbjct: 65  LPPSDSPISSPPAPPPSDLTPAPTPASTPSPANSPDSPAPAPSTEVSDVNHSNNVESDGG 124

Query: 123 VESESSKGGMNGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQYGNAARSSFL 164
            E  S   G+N GKKAGIAVGVI AA  VG+G +VYKKRQDNIRRSQYG AAR   L
Sbjct: 125 EEKSS---GLNSGKKAGIAVGVIVAAGVVGVGALVYKKRQDNIRRSQYGYAARRELL 178

The following BLAST results are available for this feature:

BLAST of CmaCh20G004830 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh20G004830 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGE9_CUCSA	7.9e-44	67.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G140840 PE=4 SV=1	[more]
A0A0A0LS26_CUCSA	1.4e-24	49.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G084290 PE=4 SV=1	[more]
B9SWB6_RICCO	4.5e-23	46.89	Structural constituent of cell wall, putative OS=Ricinus communis GN=RCOM_015416...	[more]
B9HQ96_POPTR	2.2e-22	48.80	Hydroxyproline-rich glycoprotein OS=Populus trichocarpa GN=POPTR_0009s01910g PE=...	[more]
A0A067DGZ3_CITSI	3.2e-21	53.16	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031492mg PE=4 SV=1	[more]

BLAST of CmaCh20G004830 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G45230.1	2.4e-15	48.51	hydroxyproline-rich glycoprotein family protein	[more]
AT2G28440.1	5.1e-10	39.26	proline-rich family protein	[more]
AT5G60630.1	5.9e-06	39.29	FUNCTIONS IN: molecular_function unknown	[more]

BLAST of CmaCh20G004830 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659127889\|ref\|XP_008463942.1\|	3.5e-45	69.05	PREDICTED: classical arabinogalactan protein 5-like [Cucumis melo]	[more]
gi\|778713182\|ref\|XP_011656995.1\|	1.1e-43	67.26	PREDICTED: proline-rich receptor-like protein kinase PERK9 [Cucumis sativus]	[more]
gi\|778658880\|ref\|XP_011653442.1\|	2.0e-24	49.10	PREDICTED: classical arabinogalactan protein 9-like [Cucumis sativus]	[more]
gi\|659130679\|ref\|XP_008465291.1\|	7.7e-24	48.26	PREDICTED: classical arabinogalactan protein 9 [Cucumis melo]	[more]
gi\|255578862\|ref\|XP_002530285.1\|	6.5e-23	46.89	PREDICTED: classical arabinogalactan protein 10 [Ricinus communis]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G004830.1	CmaCh20G004830.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh20G004830	Cla008743	Watermelon (97103) v1	cmawmB524
CmaCh20G004830	Csa6G140840	Cucumber (Chinese Long) v2	cmacuB554
CmaCh20G004830	MELO3C025771	Melon (DHL92) v3.5.1	cmameB489
CmaCh20G004830	ClCG02G021140	Watermelon (Charleston Gray)	cmawcgB481
CmaCh20G004830	CSPI06G11460	Wild cucumber (PI 183967)	cmacpiB560
CmaCh20G004830	CmoCh20G005180	Cucurbita moschata (Rifu)	cmacmoB550
CmaCh20G004830	CmoCh02G008920	Cucurbita moschata (Rifu)	cmacmoB553
CmaCh20G004830	Lsi10G012690	Bottle gourd (USVL1VR-Ls)	cmalsiB506
CmaCh20G004830	Cp4.1LG16g05270	Cucurbita pepo (Zucchini)	cmacpeB564
CmaCh20G004830	Cp4.1LG05g08130	Cucurbita pepo (Zucchini)	cmacpeB587
CmaCh20G004830	MELO3C025771.2	Melon (DHL92) v3.6.1	cmamedB568
CmaCh20G004830	CsaV3_1G012810	Cucumber (Chinese Long) v3	cmacucB0649
CmaCh20G004830	CsaV3_6G013900	Cucumber (Chinese Long) v3	cmacucB0666
CmaCh20G004830	Cla97C02G047180	Watermelon (97103) v2	cmawmbB568
CmaCh20G004830	Bhi10G000451	Wax gourd	cmawgoB0692
CmaCh20G004830	CsGy6G011600	Cucumber (Gy14) v2	cgybcmaB790
CmaCh20G004830	Carg22603	Silver-seed gourd	carcmaB0303

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh20G004830	Silver-seed gourd	carcmaB0473
CmaCh20G004830	Cucumber (Chinese Long) v3	cmacucB0656
CmaCh20G004830	Watermelon (97103) v2	cmawmbB565
CmaCh20G004830	Watermelon (97103) v2	cmawmbB594
CmaCh20G004830	Wax gourd	cmawgoB0674
CmaCh20G004830	Cucurbita maxima (Rimu)	cmacmaB261
CmaCh20G004830	Cucurbita maxima (Rimu)	cmacmaB468
CmaCh20G004830	Cucurbita maxima (Rimu)	cmacmaB490
CmaCh20G004830	Cucumber (Gy14) v1	cgycmaB0842
CmaCh20G004830	Cucumber (Gy14) v1	cgycmaB1065
CmaCh20G004830	Cucurbita moschata (Rifu)	cmacmoB544
CmaCh20G004830	Cucurbita moschata (Rifu)	cmacmoB569
CmaCh20G004830	Wild cucumber (PI 183967)	cmacpiB551
CmaCh20G004830	Cucumber (Chinese Long) v2	cmacuB547
CmaCh20G004830	Melon (DHL92) v3.5.1	cmameB520
CmaCh20G004830	Watermelon (Charleston Gray)	cmawcgB476
CmaCh20G004830	Watermelon (97103) v1	cmawmB513
CmaCh20G004830	Bottle gourd (USVL1VR-Ls)	cmalsiB518
CmaCh20G004830	Bottle gourd (USVL1VR-Ls)	cmalsiB524
CmaCh20G004830	Cucumber (Gy14) v2	cgybcmaB388
CmaCh20G004830	Melon (DHL92) v3.6.1	cmamedB597