MELO3C025580 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C025580
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Putative CCR4-associated factor 1-11-like protein
Location	chr12 : 13943018 .. 13944220 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATTAATCTCTCCTCTCTTCTTCTTCTTTTCCATCCGTATTCCTTCAATTCTCTCACTACTTCAATTCTACTTCTTCTTCTTTTTTTTTCTTTTTTAAAAAAAAACAATATAACTTAATTTAATTTAAATTTTCATCATATTCAGCCATGCTTATCCACGATCTCAACATCAACCACCAATCCATCCACAAACCCATCCAAATTCGTGAAGTTTGGGCTTCCAATCTCGATTCCGAATTTCGTTTGATCAGCGATCTCATCGATCGATTCCCTTGCGTTTCAATGGACACGGAGTTCCCCGGAGTCATCTTCCCCCAACAAACCAAACCCAAATTTCCAAATCACCCCTCCTATCACTACCAATTCCTCAAATCCAACGTCGACGTCCTCCATCTCATCCAGATCGGAATCACTCTCTCCGATTCCGACGGAAACTTGCCGGATCTGGGAACCGGCGACACCCGATTTATCTGGGAGTTCAACTTTAAGGACTTTGACGTGGCGCGTGACCCCCACGCTCCGGACTCCATCGAGCTTCTCCGCCGTCAGGGCATCGACTTCGAGAGGAACCGAGAGGAAGGGATCGATTCGTCACGCTTCGCGGAGTTGATGATGTCATCGGGACTCGTCTGTAACGAGTCAGTGAGTTGGGTGACGTTTCACAGTGCCTATGATTTTGGGTATTTGGTTAAGATTTTAACCCAGCAAAAGCTTCCGAAAGGGTTAGAAGAATTCCTCGGCGTCGTTAGGGTTTTCTTCGGGGATAACGTGTACGATATGAAGTACATGATGCGGTTCTGCCAGAGTCTATACGGGGGTTTGGACCGGATAGCGAAAACTATGAATGTGAACCGGGCGGTGGGAAAGTGCCATCAAGCCGGGTCAGATAGCTTGCTGACGTGGCATGCCTTTCAAAAGATGAGAGATACTTTTTTTGTAGAGAATGAAATGCACAAACATGCTGGGGTTTTGTACGGTTTAGAGGTCTTCTAATCTAAATCTAAAAATGTACCGTAAATAAATTTAATTTTAAAATTATATACCCATATATTATTTGTTTTTTATTTATTTATTTTCTAAATAGTTGGCCCATTTTCCATTTTTTTATTTAATTTGAAATGTAAAGTGTATGGAAGGGTGGGAAGGTAATCTCAATTCAAAATATAATTACACAATAAGTAAATATTATAGGGCTGGCTTTG

mRNA sequence

ATATTAATCTCTCCTCTCTTCTTCTTCTTTTCCATCCGTATTCCTTCAATTCTCTCACTACTTCAATTCTACTTCTTCTTCTTTTTTTTTCTTTTTTAAAAAAAAACAATATAACTTAATTTAATTTAAATTTTCATCATATTCAGCCATGCTTATCCACGATCTCAACATCAACCACCAATCCATCCACAAACCCATCCAAATTCGTGAAGTTTGGGCTTCCAATCTCGATTCCGAATTTCGTTTGATCAGCGATCTCATCGATCGATTCCCTTGCGTTTCAATGGACACGGAGTTCCCCGGAGTCATCTTCCCCCAACAAACCAAACCCAAATTTCCAAATCACCCCTCCTATCACTACCAATTCCTCAAATCCAACGTCGACGTCCTCCATCTCATCCAGATCGGAATCACTCTCTCCGATTCCGACGGAAACTTGCCGGATCTGGGAACCGGCGACACCCGATTTATCTGGGAGTTCAACTTTAAGGACTTTGACGTGGCGCGTGACCCCCACGCTCCGGACTCCATCGAGCTTCTCCGCCGTCAGGGCATCGACTTCGAGAGGAACCGAGAGGAAGGGATCGATTCGTCACGCTTCGCGGAGTTGATGATGTCATCGGGACTCGTCTGTAACGAGTCAGTGAGTTGGGTGACGTTTCACAGTGCCTATGATTTTGGGTATTTGGTTAAGATTTTAACCCAGCAAAAGCTTCCGAAAGGGTTAGAAGAATTCCTCGGCGTCGTTAGGGTTTTCTTCGGGGATAACGTGTACGATATGAAGTACATGATGCGGTTCTGCCAGAGTCTATACGGGGGTTTGGACCGGATAGCGAAAACTATGAATGTGAACCGGGCGGTGGGAAAGTGCCATCAAGCCGGGTCAGATAGCTTGCTGACGTGGCATGCCTTTCAAAAGATGAGAGATACTTTTTTTGTAGAGAATGAAATGCACAAACATGCTGGGGTTTTGTACGGTTTAGAGGTCTTCTAATCTAAATCTAAAAATGTACCGTAAATAAATTTAATTTTAAAATTATATACCCATATATTATTTGTTTTTTATTTATTTATTTTCTAAATAGTTGGCCCATTTTCCATTTTTTTATTTAATTTGAAATGTAAAGTGTATGGAAGGGTGGGAAGGTAATCTCAATTCAAAATATAATTACACAATAAGTAAATATTATAGGGCTGGCTTTG

Coding sequence (CDS)

ATGCTTATCCACGATCTCAACATCAACCACCAATCCATCCACAAACCCATCCAAATTCGTGAAGTTTGGGCTTCCAATCTCGATTCCGAATTTCGTTTGATCAGCGATCTCATCGATCGATTCCCTTGCGTTTCAATGGACACGGAGTTCCCCGGAGTCATCTTCCCCCAACAAACCAAACCCAAATTTCCAAATCACCCCTCCTATCACTACCAATTCCTCAAATCCAACGTCGACGTCCTCCATCTCATCCAGATCGGAATCACTCTCTCCGATTCCGACGGAAACTTGCCGGATCTGGGAACCGGCGACACCCGATTTATCTGGGAGTTCAACTTTAAGGACTTTGACGTGGCGCGTGACCCCCACGCTCCGGACTCCATCGAGCTTCTCCGCCGTCAGGGCATCGACTTCGAGAGGAACCGAGAGGAAGGGATCGATTCGTCACGCTTCGCGGAGTTGATGATGTCATCGGGACTCGTCTGTAACGAGTCAGTGAGTTGGGTGACGTTTCACAGTGCCTATGATTTTGGGTATTTGGTTAAGATTTTAACCCAGCAAAAGCTTCCGAAAGGGTTAGAAGAATTCCTCGGCGTCGTTAGGGTTTTCTTCGGGGATAACGTGTACGATATGAAGTACATGATGCGGTTCTGCCAGAGTCTATACGGGGGTTTGGACCGGATAGCGAAAACTATGAATGTGAACCGGGCGGTGGGAAAGTGCCATCAAGCCGGGTCAGATAGCTTGCTGACGTGGCATGCCTTTCAAAAGATGAGAGATACTTTTTTTGTAGAGAATGAAATGCACAAACATGCTGGGGTTTTGTACGGTTTAGAGGTCTTCTAA

Protein sequence

MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF*

Homology

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BLAST of MELO3C025580 vs. Swiss-Prot
Match: CAF1K_ARATH (Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana GN=CAF1-11 PE=2 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 6.0e-109
Identity = 190/267 (71.16%), Postives = 222/267 (83.15%), Query Frame = 1


Query: 17  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKS 76
           I IR+VWA NL+SEF LI  +++ +P +SMDTEFPGVI+          +P+Y Y  LKS
Sbjct: 12  IVIRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRGNPNYLYNLLKS 71

Query: 77  NVDVLHLIQIGITLSDSDGNLPDLG-TGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQG 136
           NVD L LIQ+G+TLSD+DGNLPDLG   + R+IWEFNF+DFDV RDPHAPDSIELLRR G
Sbjct: 72  NVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLRRHG 131

Query: 137 IDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEE 196
           IDFERNR EG++S RFAELMMSSGL+CNESVSWVTFHSAYDFGYLVKILT+++LP  L E
Sbjct: 132 IDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVALRE 191

Query: 197 FLGVVRVFFGDNVYDMKYMMRFC-QSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHA 256
           FLG++R FFGD VYD+K++MRFC Q LYGGLDR+A+++ VNRAVGKCHQAGSDSLLTW A
Sbjct: 192 FLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLTWQA 251

Query: 257 FQKMRDTFFVENEMHKHAGVLYGLEVF 282
           FQ+MRD +FVE+   KHAGVLYGLEVF
Sbjct: 252 FQRMRDLYFVEDGAEKHAGVLYGLEVF 278

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BLAST of MELO3C025580 vs. Swiss-Prot
Match: CAF1I_ARATH (Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana GN=CAF1-9 PE=2 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 4.4e-104
Identity = 188/264 (71.21%), Postives = 218/264 (82.58%), Query Frame = 1


Query: 20  REVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVD 79
           REVWA NL+SEF LIS++ID +P +SMDTEFPGVIF    +  F N P   Y  LK+NVD
Sbjct: 20  REVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLR--FTN-PDDLYTLLKANVD 79

Query: 80  VLHLIQIGITLSDSDGNLPDLGTGDTR-FIWEFNFKDFDVARDPHAPDSIELLRRQGIDF 139
            L LIQ+G+TLSD +GNLPDLG    R FIWEFNF+DFDVARD HAPDSIELLRRQGIDF
Sbjct: 80  ALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLRRQGIDF 139

Query: 140 ERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLG 199
           ERN  +G++S RFAELMMSSGLVCNE VSWVTFHSAYDFGYL+KILT+++LP  L EF  
Sbjct: 140 ERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGEFKR 199

Query: 200 VVRVFFGDNVYDMKYMMRFCQ-SLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQK 259
           V+RV FG+ VYD+K+MM+FC+  L+GGLDR+A+T+ VNRAVGKCHQAGSDSLLTWHAFQ+
Sbjct: 200 VMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLTWHAFQR 259

Query: 260 MRDTFFVENEMHKHAGVLYGLEVF 282
           MRD +FV++   KHAGVLYGLEVF
Sbjct: 260 MRDLYFVQDGPEKHAGVLYGLEVF 280

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BLAST of MELO3C025580 vs. Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 294.3 bits (752), Expect = 1.4e-78
Identity = 148/265 (55.85%), Postives = 196/265 (73.96%), Query Frame = 1


Query: 17  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIF-PQQTKPKFPNHPSYHYQFLK 76
           IQIREVW  NL+SE  LI +++D FP V+MDTEFPG++  P  T   F  +  YHY+ LK
Sbjct: 10  IQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGT---FKTNTEYHYETLK 69

Query: 77  SNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQG 136
           +NV++L +IQ+G+T SD  GNLP  GT +   IW+FNF++FD+  D +A DSIELLR+ G
Sbjct: 70  TNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSG 129

Query: 137 IDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEE 196
           IDF +N E GIDS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT Q LP+    
Sbjct: 130 IDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTG 189

Query: 197 FLGVVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAF 256
           F  ++ V+F   VYD+K++M+FC SL+GGL+++A+ ++V R VG CHQAGSDSLLT   F
Sbjct: 190 FFEMISVYF-PRVYDIKHLMKFCNSLHGGLNKLAELLDVER-VGICHQAGSDSLLTSCTF 249

Query: 257 QKMRDTFFVENEMHKHAGVLYGLEV 281
           +K+++ FF+   M K++GVLYGL V
Sbjct: 250 RKLQENFFI-GSMEKYSGVLYGLGV 268

[Close]

BLAST of MELO3C025580 vs. Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.3e-76
Identity = 146/265 (55.09%), Postives = 193/265 (72.83%), Query Frame = 1


Query: 17  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIF-PQQTKPKFPNHPSYHYQFLK 76
           IQIREVW  NL  E  LI D++D FP V+MDTEFPG++  P  T   F ++  YHY+ LK
Sbjct: 10  IQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGT---FKSNADYHYETLK 69

Query: 77  SNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQG 136
           +NV++L +IQ+G+T S+  GNLP  GT D   IW+FNF++FD+  D  A DSIELL++ G
Sbjct: 70  TNVNILKMIQLGLTFSNEQGNLPTCGT-DKYCIWQFNFREFDLDSDIFALDSIELLKQSG 129

Query: 137 IDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEE 196
           ID  +N  +GIDS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT Q LP    +
Sbjct: 130 IDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTD 189

Query: 197 FLGVVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAF 256
           F  ++ V+F   VYD+K++M+FC SL+GGL+++A+ + V R VG CHQAGSDSLLT   F
Sbjct: 190 FFKLINVYF-PTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTF 249

Query: 257 QKMRDTFFVENEMHKHAGVLYGLEV 281
           +K+++ FFV   +HK++GVLYGL V
Sbjct: 250 RKLKENFFV-GPLHKYSGVLYGLGV 267

[Close]

BLAST of MELO3C025580 vs. Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.6e-72
Identity = 140/264 (53.03%), Postives = 188/264 (71.21%), Query Frame = 1


Query: 17  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKS 76
           I IREVW  NL  EF LI +++D+F  ++MDTEFPGV+       K+ N    +Y+ LK 
Sbjct: 10  IMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNN--DLNYRTLKE 69

Query: 77  NVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGI 136
           NVD+L LIQ+G+T SD +GNLP  GT D   IW+FNF++F++  D +A +SIELLR+ GI
Sbjct: 70  NVDLLKLIQVGLTFSDENGNLPTCGT-DKFCIWQFNFREFNIGEDIYASESIELLRQCGI 129

Query: 137 DFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEF 196
           DF++N E+GID  RF ELMMSSG+V N+++SWVTFH  YDFGYLVK+LT ++LP    +F
Sbjct: 130 DFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADF 189

Query: 197 LGVVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQ 256
             ++ V+F   VYD+K++M FC  L+GGL+R+A+ M V R VG CHQAGSDSLLT  +F+
Sbjct: 190 FKLLYVYF-PTVYDIKHLMTFCNGLFGGLNRLAELMGVER-VGICHQAGSDSLLTLGSFR 249

Query: 257 KMRDTFFVENEMHKHAGVLYGLEV 281
           K+++ +F      K+ GVLYGL V
Sbjct: 250 KLKERYF-PGSTEKYTGVLYGLGV 267

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BLAST of MELO3C025580 vs. TrEMBL
Match: A0A0A0LYC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G168920 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 5.1e-147
Identity = 256/281 (91.10%), Postives = 268/281 (95.37%), Query Frame = 1


Query: 1   MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTK 60
           MLIHDLN NH+SI    QIREVWASNL+SEFRLI DLID+FPCVSMDTEFPGVIFPQQ  
Sbjct: 1   MLIHDLNTNHKSI----QIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQDI 60

Query: 61  PKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVAR 120
           PK PNHPS+HYQFLKSNVD+LHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVAR
Sbjct: 61  PKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVAR 120

Query: 121 DPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYL 180
           D HAP+SIELLRRQGIDF+RNREEGIDSSRFAELMMSSGLVCN+SVSWVTFHSAYDFGYL
Sbjct: 121 DLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYL 180

Query: 181 VKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGK 240
           VKILT QKLPK LE+FLGVVR+FFGDNVYDMKY+MRFCQSLYGGLDRIAKTMNVNRAVGK
Sbjct: 181 VKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGK 240

Query: 241 CHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF 282
           CHQAGSDSLLTWHAFQKMRDTFFV+ EMHKHAGVLYGLEVF
Sbjct: 241 CHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF 277

[Close]

BLAST of MELO3C025580 vs. TrEMBL
Match: A0A061GVA7_THECC (Polynucleotidyl transferase, ribonuclease H-like superfamily protein OS=Theobroma cacao GN=TCM_041300 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 2.3e-115
Identity = 203/277 (73.29%), Postives = 241/277 (87.00%), Query Frame = 1


Query: 9   NHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNH-- 68
           +H+S  KP+ IREVW+ NL+SEF LIS +ID +P +SMDTEFPG++   +  P  P H  
Sbjct: 6   SHRS-SKPVMIREVWSDNLESEFELISQVIDEYPFISMDTEFPGLVIKPKVDPSRPYHSQ 65

Query: 69  --PSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVARDPHA 128
             PS HY+FLKSNVD L+LIQ+G+TLSDS GNLP+LGT DT+FIWEFNF DFDV RD HA
Sbjct: 66  LQPSDHYKFLKSNVDALNLIQVGLTLSDSSGNLPNLGT-DTQFIWEFNFSDFDVERDAHA 125

Query: 129 PDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKIL 188
           PDSIELLRRQGIDFE+NRE+GIDS RFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKIL
Sbjct: 126 PDSIELLRRQGIDFEKNREKGIDSVRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKIL 185

Query: 189 TQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQA 248
           T+++LP  L+EFL ++RVFFG+ VYD+K+MMRFC+SLYGGLDR+A+T++VNRAVGKCHQA
Sbjct: 186 TRRELPGDLDEFLRILRVFFGNRVYDLKHMMRFCKSLYGGLDRVARTLDVNRAVGKCHQA 245

Query: 249 GSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF 282
           GSDSLLTWHAFQKMRD +FV++   KHAGVLYGLEV+
Sbjct: 246 GSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY 280

[Close]

BLAST of MELO3C025580 vs. TrEMBL
Match: F6HHC1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g01090 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 3.9e-115
Identity = 203/269 (75.46%), Postives = 238/269 (88.48%), Query Frame = 1


Query: 15  KPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIF-PQQTKPKFP-NHPSYHYQ 74
           KP+ IREVWA NL+SEF LISDLID++P +SMDTEFPGV+F P   + +F    PS HY+
Sbjct: 11  KPVMIREVWAENLESEFELISDLIDQYPFISMDTEFPGVVFRPSGGEQQFRLRRPSDHYR 70

Query: 75  FLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVARDPHAPDSIELLR 134
           FLKSNVD L LIQ+G+TLSD++GNLPDLGTG+ RFIWEFNF+DFDVARD HAPDSIELL 
Sbjct: 71  FLKSNVDALCLIQVGLTLSDANGNLPDLGTGN-RFIWEFNFRDFDVARDAHAPDSIELLS 130

Query: 135 RQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKG 194
           RQGIDF+RNREEG+DS+RFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILT++ LP G
Sbjct: 131 RQGIDFDRNREEGVDSARFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSG 190

Query: 195 LEEFLGVVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTW 254
           LEEFL ++RVFFG  VYD+K++M+FC SLYGGLDR+A+T+ V+RAVGKCHQAGSDSLLTW
Sbjct: 191 LEEFLSILRVFFGTKVYDVKHLMKFCASLYGGLDRVARTLEVDRAVGKCHQAGSDSLLTW 250

Query: 255 HAFQKMRDTFFVENEMHKHAGVLYGLEVF 282
           HAFQK+RD +F ++   K+AGVLYGLEVF
Sbjct: 251 HAFQKIRDVYFEKDGTEKYAGVLYGLEVF 278

[Close]

BLAST of MELO3C025580 vs. TrEMBL
Match: B9MYV0_POPTR (CCR4-NOT transcription complex family protein OS=Populus trichocarpa GN=POPTR_0004s21070g PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 8.7e-115
Identity = 204/273 (74.73%), Postives = 235/273 (86.08%), Query Frame = 1


Query: 15  KPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNH------PS 74
           K I IREVW+ NL+SEF LI DLID FP +SMDTEFPGV+F     P    +      PS
Sbjct: 5   KEIVIREVWSCNLESEFELIRDLIDEFPFISMDTEFPGVVFRPPVDPTNNRNYFRQLKPS 64

Query: 75  YHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVARDPHAPDSI 134
            HY+ LKSNVD L+LIQ+G+TLSD++GNLPDLGTG+ RFIWEFNF+DFDV RD HAPDSI
Sbjct: 65  DHYKILKSNVDALNLIQVGLTLSDAEGNLPDLGTGN-RFIWEFNFRDFDVERDSHAPDSI 124

Query: 135 ELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQK 194
           ELLRRQGIDFERNREEG+DS+RFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILT+++
Sbjct: 125 ELLRRQGIDFERNREEGVDSARFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRE 184

Query: 195 LPKGLEEFLGVVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDS 254
           LP GL  FL ++RVFFG+N+YD+K+MMRFC+SLYGGLDR+A+T+ VNR VGKCHQAGSDS
Sbjct: 185 LPSGLVGFLSLLRVFFGNNIYDVKHMMRFCKSLYGGLDRVARTLEVNREVGKCHQAGSDS 244

Query: 255 LLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF 282
           LLTWHAFQKMRD FFV++   +HAGVLYGLEVF
Sbjct: 245 LLTWHAFQKMRDVFFVKDGPEQHAGVLYGLEVF 276

[Close]

BLAST of MELO3C025580 vs. TrEMBL
Match: W9RQ69_9ROSA (Putative CCR4-associated factor 1-11-like protein OS=Morus notabilis GN=L484_016319 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 1.9e-114
Identity = 203/271 (74.91%), Postives = 234/271 (86.35%), Query Frame = 1


Query: 15  KPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFP---QQTKP-KFPNHPSYH 74
           KPI IREVWASNL++EF LI DLIDRFP +SMDTEFPGV++     Q+KP  +   PS H
Sbjct: 11  KPIVIREVWASNLEAEFELIGDLIDRFPYISMDTEFPGVVYRATFDQSKPYAYRLRPSDH 70

Query: 75  YQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVARDPHAPDSIEL 134
           Y+ LKSNVD L LIQ+G+TLSD+DGNLPDL  G++RFIWEFNF+DFDVARD HAPDSIEL
Sbjct: 71  YRVLKSNVDALSLIQVGLTLSDADGNLPDLEGGESRFIWEFNFRDFDVARDLHAPDSIEL 130

Query: 135 LRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLP 194
           L+RQGIDF+RNR EGIDS+RFAELMMSSGLVCN++VSWVTFHSAYDFGYLVKILT++ LP
Sbjct: 131 LKRQGIDFDRNRSEGIDSARFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRRCLP 190

Query: 195 KGLEEFLGVVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLL 254
             L +FL ++R FFGD VYD+K+MMRFC SLYGGLDR+AKT+ VNR VGKCHQAGSDSLL
Sbjct: 191 GALADFLKILRAFFGDRVYDVKHMMRFCNSLYGGLDRVAKTLEVNRVVGKCHQAGSDSLL 250

Query: 255 TWHAFQKMRDTFFVENEMHKHAGVLYGLEVF 282
           TWHAFQK+RD +FV +   KHAGVLYGLEVF
Sbjct: 251 TWHAFQKIRDVYFVTDGPEKHAGVLYGLEVF 281

[Close]

BLAST of MELO3C025580 vs. TAIR10
Match: AT5G22250.1 (AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 395.2 bits (1014), Expect = 3.4e-110
Identity = 190/267 (71.16%), Postives = 222/267 (83.15%), Query Frame = 1


Query: 17  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKS 76
           I IR+VWA NL+SEF LI  +++ +P +SMDTEFPGVI+          +P+Y Y  LKS
Sbjct: 12  IVIRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRGNPNYLYNLLKS 71

Query: 77  NVDVLHLIQIGITLSDSDGNLPDLG-TGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQG 136
           NVD L LIQ+G+TLSD+DGNLPDLG   + R+IWEFNF+DFDV RDPHAPDSIELLRR G
Sbjct: 72  NVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLRRHG 131

Query: 137 IDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEE 196
           IDFERNR EG++S RFAELMMSSGL+CNESVSWVTFHSAYDFGYLVKILT+++LP  L E
Sbjct: 132 IDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVALRE 191

Query: 197 FLGVVRVFFGDNVYDMKYMMRFC-QSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHA 256
           FLG++R FFGD VYD+K++MRFC Q LYGGLDR+A+++ VNRAVGKCHQAGSDSLLTW A
Sbjct: 192 FLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLTWQA 251

Query: 257 FQKMRDTFFVENEMHKHAGVLYGLEVF 282
           FQ+MRD +FVE+   KHAGVLYGLEVF
Sbjct: 252 FQRMRDLYFVEDGAEKHAGVLYGLEVF 278

[Close]

BLAST of MELO3C025580 vs. TAIR10
Match: AT3G44260.1 (AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 379.0 bits (972), Expect = 2.5e-105
Identity = 188/264 (71.21%), Postives = 218/264 (82.58%), Query Frame = 1


Query: 20  REVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKSNVD 79
           REVWA NL+SEF LIS++ID +P +SMDTEFPGVIF    +  F N P   Y  LK+NVD
Sbjct: 20  REVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLR--FTN-PDDLYTLLKANVD 79

Query: 80  VLHLIQIGITLSDSDGNLPDLGTGDTR-FIWEFNFKDFDVARDPHAPDSIELLRRQGIDF 139
            L LIQ+G+TLSD +GNLPDLG    R FIWEFNF+DFDVARD HAPDSIELLRRQGIDF
Sbjct: 80  ALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLRRQGIDF 139

Query: 140 ERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEFLG 199
           ERN  +G++S RFAELMMSSGLVCNE VSWVTFHSAYDFGYL+KILT+++LP  L EF  
Sbjct: 140 ERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGEFKR 199

Query: 200 VVRVFFGDNVYDMKYMMRFCQ-SLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQK 259
           V+RV FG+ VYD+K+MM+FC+  L+GGLDR+A+T+ VNRAVGKCHQAGSDSLLTWHAFQ+
Sbjct: 200 VMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLTWHAFQR 259

Query: 260 MRDTFFVENEMHKHAGVLYGLEVF 282
           MRD +FV++   KHAGVLYGLEVF
Sbjct: 260 MRDLYFVQDGPEKHAGVLYGLEVF 280

[Close]

BLAST of MELO3C025580 vs. TAIR10
Match: AT2G32070.1 (AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 294.3 bits (752), Expect = 8.1e-80
Identity = 148/265 (55.85%), Postives = 196/265 (73.96%), Query Frame = 1


Query: 17  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIF-PQQTKPKFPNHPSYHYQFLK 76
           IQIREVW  NL+SE  LI +++D FP V+MDTEFPG++  P  T   F  +  YHY+ LK
Sbjct: 10  IQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGT---FKTNTEYHYETLK 69

Query: 77  SNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQG 136
           +NV++L +IQ+G+T SD  GNLP  GT +   IW+FNF++FD+  D +A DSIELLR+ G
Sbjct: 70  TNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSG 129

Query: 137 IDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEE 196
           IDF +N E GIDS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT Q LP+    
Sbjct: 130 IDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTG 189

Query: 197 FLGVVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAF 256
           F  ++ V+F   VYD+K++M+FC SL+GGL+++A+ ++V R VG CHQAGSDSLLT   F
Sbjct: 190 FFEMISVYF-PRVYDIKHLMKFCNSLHGGLNKLAELLDVER-VGICHQAGSDSLLTSCTF 249

Query: 257 QKMRDTFFVENEMHKHAGVLYGLEV 281
           +K+++ FF+   M K++GVLYGL V
Sbjct: 250 RKLQENFFI-GSMEKYSGVLYGLGV 268

[Close]

BLAST of MELO3C025580 vs. TAIR10
Match: AT1G80780.3 (AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 287.0 bits (733), Expect = 1.3e-77
Identity = 146/265 (55.09%), Postives = 193/265 (72.83%), Query Frame = 1


Query: 17  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIF-PQQTKPKFPNHPSYHYQFLK 76
           IQIREVW  NL  E  LI D++D FP V+MDTEFPG++  P  T   F ++  YHY+ LK
Sbjct: 10  IQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGT---FKSNADYHYETLK 69

Query: 77  SNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQG 136
           +NV++L +IQ+G+T S+  GNLP  GT D   IW+FNF++FD+  D  A DSIELL++ G
Sbjct: 70  TNVNILKMIQLGLTFSNEQGNLPTCGT-DKYCIWQFNFREFDLDSDIFALDSIELLKQSG 129

Query: 137 IDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEE 196
           ID  +N  +GIDS RFAEL+MSSG+V NE+V WVTFHS YDFGYL+K+LT Q LP    +
Sbjct: 130 IDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTD 189

Query: 197 FLGVVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAF 256
           F  ++ V+F   VYD+K++M+FC SL+GGL+++A+ + V R VG CHQAGSDSLLT   F
Sbjct: 190 FFKLINVYF-PTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTF 249

Query: 257 QKMRDTFFVENEMHKHAGVLYGLEV 281
           +K+++ FFV   +HK++GVLYGL V
Sbjct: 250 RKLKENFFV-GPLHKYSGVLYGLGV 267

[Close]

BLAST of MELO3C025580 vs. TAIR10
Match: AT5G10960.1 (AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 273.5 bits (698), Expect = 1.5e-73
Identity = 140/264 (53.03%), Postives = 188/264 (71.21%), Query Frame = 1


Query: 17  IQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNHPSYHYQFLKS 76
           I IREVW  NL  EF LI +++D+F  ++MDTEFPGV+       K+ N    +Y+ LK 
Sbjct: 10  IMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNN--DLNYRTLKE 69

Query: 77  NVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVARDPHAPDSIELLRRQGI 136
           NVD+L LIQ+G+T SD +GNLP  GT D   IW+FNF++F++  D +A +SIELLR+ GI
Sbjct: 70  NVDLLKLIQVGLTFSDENGNLPTCGT-DKFCIWQFNFREFNIGEDIYASESIELLRQCGI 129

Query: 137 DFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKGLEEF 196
           DF++N E+GID  RF ELMMSSG+V N+++SWVTFH  YDFGYLVK+LT ++LP    +F
Sbjct: 130 DFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADF 189

Query: 197 LGVVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTWHAFQ 256
             ++ V+F   VYD+K++M FC  L+GGL+R+A+ M V R VG CHQAGSDSLLT  +F+
Sbjct: 190 FKLLYVYF-PTVYDIKHLMTFCNGLFGGLNRLAELMGVER-VGICHQAGSDSLLTLGSFR 249

Query: 257 KMRDTFFVENEMHKHAGVLYGLEV 281
           K+++ +F      K+ GVLYGL V
Sbjct: 250 KLKERYF-PGSTEKYTGVLYGLGV 267

[Close]

BLAST of MELO3C025580 vs. NCBI nr
Match: gi|659127315|ref|XP_008463638.1| (PREDICTED: probable CCR4-associated factor 1 homolog 11 [Cucumis melo])

HSP 1 Score: 583.2 bits (1502), Expect = 2.5e-163
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 1


Query: 1   MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTK 60
           MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTK
Sbjct: 1   MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTK 60

Query: 61  PKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVAR 120
           PKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVAR
Sbjct: 61  PKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVAR 120

Query: 121 DPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYL 180
           DPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYL
Sbjct: 121 DPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYL 180

Query: 181 VKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGK 240
           VKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGK
Sbjct: 181 VKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGK 240

Query: 241 CHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF 282
           CHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF
Sbjct: 241 CHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF 281

[Close]

BLAST of MELO3C025580 vs. NCBI nr
Match: gi|449443480|ref|XP_004139505.1| (PREDICTED: probable CCR4-associated factor 1 homolog 11 [Cucumis sativus])

HSP 1 Score: 528.5 bits (1360), Expect = 7.2e-147
Identity = 256/281 (91.10%), Postives = 268/281 (95.37%), Query Frame = 1


Query: 1   MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTK 60
           MLIHDLN NH+SI    QIREVWASNL+SEFRLI DLID+FPCVSMDTEFPGVIFPQQ  
Sbjct: 1   MLIHDLNTNHKSI----QIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQDI 60

Query: 61  PKFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVAR 120
           PK PNHPS+HYQFLKSNVD+LHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVAR
Sbjct: 61  PKSPNHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVAR 120

Query: 121 DPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYL 180
           D HAP+SIELLRRQGIDF+RNREEGIDSSRFAELMMSSGLVCN+SVSWVTFHSAYDFGYL
Sbjct: 121 DLHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYL 180

Query: 181 VKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGK 240
           VKILT QKLPK LE+FLGVVR+FFGDNVYDMKY+MRFCQSLYGGLDRIAKTMNVNRAVGK
Sbjct: 181 VKILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGK 240

Query: 241 CHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF 282
           CHQAGSDSLLTWHAFQKMRDTFFV+ EMHKHAGVLYGLEVF
Sbjct: 241 CHQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF 277

[Close]

BLAST of MELO3C025580 vs. NCBI nr
Match: gi|590586505|ref|XP_007015724.1| (Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Theobroma cacao])

HSP 1 Score: 423.3 bits (1087), Expect = 3.3e-115
Identity = 203/277 (73.29%), Postives = 241/277 (87.00%), Query Frame = 1


Query: 9   NHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNH-- 68
           +H+S  KP+ IREVW+ NL+SEF LIS +ID +P +SMDTEFPG++   +  P  P H  
Sbjct: 6   SHRS-SKPVMIREVWSDNLESEFELISQVIDEYPFISMDTEFPGLVIKPKVDPSRPYHSQ 65

Query: 69  --PSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVARDPHA 128
             PS HY+FLKSNVD L+LIQ+G+TLSDS GNLP+LGT DT+FIWEFNF DFDV RD HA
Sbjct: 66  LQPSDHYKFLKSNVDALNLIQVGLTLSDSSGNLPNLGT-DTQFIWEFNFSDFDVERDAHA 125

Query: 129 PDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKIL 188
           PDSIELLRRQGIDFE+NRE+GIDS RFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKIL
Sbjct: 126 PDSIELLRRQGIDFEKNREKGIDSVRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKIL 185

Query: 189 TQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQA 248
           T+++LP  L+EFL ++RVFFG+ VYD+K+MMRFC+SLYGGLDR+A+T++VNRAVGKCHQA
Sbjct: 186 TRRELPGDLDEFLRILRVFFGNRVYDLKHMMRFCKSLYGGLDRVARTLDVNRAVGKCHQA 245

Query: 249 GSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF 282
           GSDSLLTWHAFQKMRD +FV++   KHAGVLYGLEV+
Sbjct: 246 GSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVY 280

[Close]

BLAST of MELO3C025580 vs. NCBI nr
Match: gi|225464848|ref|XP_002271636.1| (PREDICTED: probable CCR4-associated factor 1 homolog 9 [Vitis vinifera])

HSP 1 Score: 422.5 bits (1085), Expect = 5.6e-115
Identity = 203/269 (75.46%), Postives = 238/269 (88.48%), Query Frame = 1


Query: 15  KPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIF-PQQTKPKFP-NHPSYHYQ 74
           KP+ IREVWA NL+SEF LISDLID++P +SMDTEFPGV+F P   + +F    PS HY+
Sbjct: 11  KPVMIREVWAENLESEFELISDLIDQYPFISMDTEFPGVVFRPSGGEQQFRLRRPSDHYR 70

Query: 75  FLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVARDPHAPDSIELLR 134
           FLKSNVD L LIQ+G+TLSD++GNLPDLGTG+ RFIWEFNF+DFDVARD HAPDSIELL 
Sbjct: 71  FLKSNVDALCLIQVGLTLSDANGNLPDLGTGN-RFIWEFNFRDFDVARDAHAPDSIELLS 130

Query: 135 RQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQKLPKG 194
           RQGIDF+RNREEG+DS+RFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILT++ LP G
Sbjct: 131 RQGIDFDRNREEGVDSARFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSG 190

Query: 195 LEEFLGVVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDSLLTW 254
           LEEFL ++RVFFG  VYD+K++M+FC SLYGGLDR+A+T+ V+RAVGKCHQAGSDSLLTW
Sbjct: 191 LEEFLSILRVFFGTKVYDVKHLMKFCASLYGGLDRVARTLEVDRAVGKCHQAGSDSLLTW 250

Query: 255 HAFQKMRDTFFVENEMHKHAGVLYGLEVF 282
           HAFQK+RD +F ++   K+AGVLYGLEVF
Sbjct: 251 HAFQKIRDVYFEKDGTEKYAGVLYGLEVF 278

[Close]

BLAST of MELO3C025580 vs. NCBI nr
Match: gi|566167715|ref|XP_006384784.1| (CCR4-NOT transcription complex family protein [Populus trichocarpa])

HSP 1 Score: 421.4 bits (1082), Expect = 1.2e-114
Identity = 204/273 (74.73%), Postives = 235/273 (86.08%), Query Frame = 1


Query: 15  KPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTKPKFPNH------PS 74
           K I IREVW+ NL+SEF LI DLID FP +SMDTEFPGV+F     P    +      PS
Sbjct: 5   KEIVIREVWSCNLESEFELIRDLIDEFPFISMDTEFPGVVFRPPVDPTNNRNYFRQLKPS 64

Query: 75  YHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVARDPHAPDSI 134
            HY+ LKSNVD L+LIQ+G+TLSD++GNLPDLGTG+ RFIWEFNF+DFDV RD HAPDSI
Sbjct: 65  DHYKILKSNVDALNLIQVGLTLSDAEGNLPDLGTGN-RFIWEFNFRDFDVERDSHAPDSI 124

Query: 135 ELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTQQK 194
           ELLRRQGIDFERNREEG+DS+RFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILT+++
Sbjct: 125 ELLRRQGIDFERNREEGVDSARFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRE 184

Query: 195 LPKGLEEFLGVVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAVGKCHQAGSDS 254
           LP GL  FL ++RVFFG+N+YD+K+MMRFC+SLYGGLDR+A+T+ VNR VGKCHQAGSDS
Sbjct: 185 LPSGLVGFLSLLRVFFGNNIYDVKHMMRFCKSLYGGLDRVARTLEVNREVGKCHQAGSDS 244

Query: 255 LLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF 282
           LLTWHAFQKMRD FFV++   +HAGVLYGLEVF
Sbjct: 245 LLTWHAFQKMRDVFFVKDGPEQHAGVLYGLEVF 276

The following BLAST results are available for this feature:

BLAST of MELO3C025580 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CAF1K_ARATH	6.0e-109	71.16	Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana GN=CAF1-11 ...	[more]
CAF1I_ARATH	4.4e-104	71.21	Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana GN=CAF1-9 PE...	[more]
CAF1G_ARATH	1.4e-78	55.85	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE...	[more]
CAF1F_ARATH	2.3e-76	55.09	Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE...	[more]
CAF1J_ARATH	2.6e-72	53.03	Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 ...	[more]

BLAST of MELO3C025580 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYC8_CUCSA	5.1e-147	91.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G168920 PE=4 SV=1	[more]
A0A061GVA7_THECC	2.3e-115	73.29	Polynucleotidyl transferase, ribonuclease H-like superfamily protein OS=Theobrom...	[more]
F6HHC1_VITVI	3.9e-115	75.46	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g01090 PE=4 SV=...	[more]
B9MYV0_POPTR	8.7e-115	74.73	CCR4-NOT transcription complex family protein OS=Populus trichocarpa GN=POPTR_00...	[more]
W9RQ69_9ROSA	1.9e-114	74.91	Putative CCR4-associated factor 1-11-like protein OS=Morus notabilis GN=L484_016...	[more]

BLAST of MELO3C025580 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22250.1	3.4e-110	71.16	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G44260.1	2.5e-105	71.21	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT2G32070.1	8.1e-80	55.85	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.3	1.3e-77	55.09	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G10960.1	1.5e-73	53.03	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

BLAST of MELO3C025580 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659127315\|ref\|XP_008463638.1\|	2.5e-163	100.00	PREDICTED: probable CCR4-associated factor 1 homolog 11 [Cucumis melo]	[more]
gi\|449443480\|ref\|XP_004139505.1\|	7.2e-147	91.10	PREDICTED: probable CCR4-associated factor 1 homolog 11 [Cucumis sativus]	[more]
gi\|590586505\|ref\|XP_007015724.1\|	3.3e-115	73.29	Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Theobroma ...	[more]
gi\|225464848\|ref\|XP_002271636.1\|	5.6e-115	75.46	PREDICTED: probable CCR4-associated factor 1 homolog 9 [Vitis vinifera]	[more]
gi\|566167715\|ref\|XP_006384784.1\|	1.2e-114	74.73	CCR4-NOT transcription complex family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006941	RNase_CAF1
IPR012337	RNaseH-like_sf

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process	GO:0043928	exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay
biological_process	GO:0017148	negative regulation of translation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0030015	CCR4-NOT core complex
cellular_component	GO:0000932	cytoplasmic mRNA processing body
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU45811	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025580T1	MELO3C025580T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU45811	MU45811	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 169..251 score: 7.1E-6coord: 22..146 score: 3.
IPR012337	Ribonuclease H-like domain	GENE3D	G3DSA:3.30.420.10		coord: 12..279 score: 8.0E
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 19..278 score: 8.28
None	No IPR available	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 5..281 score: 3.0E
None	No IPR available	PANTHER	PTHR10797:SF3	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED	coord: 5..281 score: 3.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C025580	Csa1G168920	Cucumber (Chinese Long) v2	cumeB015
MELO3C025580	Cla011046	Watermelon (97103) v1	mewmB173
MELO3C025580	ClCG01G011640	Watermelon (Charleston Gray)	mewcgB133
MELO3C025580	Cla97C01G011260	Watermelon (97103) v2	mewmbB136
MELO3C025580	CSPI01G15070	Wild cucumber (PI 183967)	cpimeB030
MELO3C025580	Cucsa.319630	Cucumber (Gy14) v1	cgymeB526
MELO3C025580	CsGy1G014850	Cucumber (Gy14) v2	cgybmeB028
MELO3C025580	CsaV3_1G015170	Cucumber (Chinese Long) v3	cucmeB030
MELO3C025580	CsaV3_UNG232210	Cucumber (Chinese Long) v3	cucmeB095

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C025580	Cucurbita maxima (Rimu)	cmameB195
MELO3C025580	Cucurbita moschata (Rifu)	cmomeB182
MELO3C025580	Cucurbita pepo (Zucchini)	cpemeB004