MELO3C025561.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C025561.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	mitochondrial import inner membrane translocase subunit tim16
Location	chr12 : 13453439 .. 13456481 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAAGCCCTAGGCCCAATAATTTGGTTCTTTTCCACCATTGTTTTCTCTGTTTCTCCCTGTGGCAGCCATACCCGAACTCCCTCGCCTATCATATTTCATTTCTTCTTCTCCTTCTCCTTCTCCATTGCTGCATATAGCTCCATCCCAAGGTCTGTTCTATTTTTCTTCGCTTTCTTACGTTATTATTATTATTTTCTTTTTATTCTTTACAATCCTCTTTCTTCATTATTCTTGCCCATTTTTCTTCCTTAGCTCCCCATCATTAATCTCATCTTCTTCCTCTTCTCTCTCTTTTCCATCTATAATTCAACAATCTTCCCCAATTTTATTTTCAAATCTTGCCAGATTAAGTTTCGTGTCTTGTGGGGTTCATACGTTCGCCCATCCTTAAGTATCCACAATTCTTTTTCTTTTTTCTAGGTTAGATATCCATATTGAATGATATTTCAATTTCTAATCCAAATATTTTATCTGAGATTTTAAACCCCAAATAAAACGAAATAACCCCTAAGATTCCTTGCATGGTTGATTAAATAGCTTCTCTGGTTGATTTTGCAGCTCTAGCGGCTTAACGATTCTGGACGTGTTGTCAGGGCCAGCCACTTAATCATGGTATATCTCTTCTTTCTTTCTCTCCTCTCTTTTAACTTGATGGGGGATTGGTTACCAAGATAAGGAGAACTAAATATGGAATAAGGAGTATAAACTTAACATATTTTGTTAATCTTATCTGAATTATTATGTTTATGTCTCCTCCATTCAGTAATTTGTTTCCATATTGATTGTTATAATTCATACTTTCATTTCGTTCCTAAGTTTTCTCTGGCTGAAGTTTCGACTTGGGGAAAGACTACAGAGAGTGTTAAGTCTTGTGGAATTTTTCTCCATATTAAATCTTATTTTTCTTTTTTTCCCTCCTATGTATTTGTCTAGATATGTTGGGTTCTTTGTGAAATGATACGATTTTCTTGTCCTCTCCACTTTTTATAGTATCTAAAGTTAAGCATATTATCCTATTTATATATCACTTGTGTCATGTCATGTTATGTACTGTGTACTTCGCCATATATATATTTTATCTATTGAATTAGCACTTCCTAATTAGAACTGGTGCATTTACTTCTTTTGTGTTGGTGAATTAGAGGAGTGGATATGCATAATTTTTGAAGTTAGTCTTTTTCAGTTTGAGAACTTCCTATAAGAGAAGCTCTTTGCTTATATATTTTTGGACAGGCTGCAAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCGAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTGCAAGTAAGTATACTCTTTTTTATTCCACCATTTTTCCCCCTCCTATCACAAATTGGCCAATTTTTCCTCGATATCATTTTTATTGGTGTAAAATGTTTACGGCTGGCTTGATGGAAACTTGACTTATAGAACAAAAGAAACTTTCACCTTGTCCTTGAACTATTAGAAGCTATAATTATAATGCAAATGCCAACTTGGGATGTTTAAGTGTTTTGGCAATACAAAGTTCTGTGTGCACATAGTTTAATTCTGCTTCAGGTGATAGAAATAGATATCAAAGTAATCTATTACATCCTTCTCATCTTCTTAACCTTGAATAGTGTCTTAGATCTTCGGCAAGTGGTCAAAAGAATTTGTTATTTTTCTATCCTGTGACATGAACTAGCGATTTGCAAACAAAAAAAAAAAAAAAGGATCGCTTGTCCCACCAACTTTTTAAGTTGGTGTAAACAGCTTAACTTCAATACTAAACATGATTGAAATTTGGACATTTATTGAGTCATCTTTCCCTATTTTTCTATTTTTCACAGTTATTGAGGAACTCCATCTTCTCTCTATCTCTACTTTTCACATTTGTTAAATACTCTACATTCTCCTCCTTCTCCTATTAGAGCGTGATCCTTGATTCTTCTCTATTGGTAATGGAAATTCTCTTGTTACTAATTGTGGATTAGTGAGCATCTCTCTTAAATCCTTCTGCCTATATAATAAAAGAAAGTAGTGAGGAGAGTGCCAACTCCAACCCCGAGGGACGTTGGAAGGATGAGATGGCACCCCATTCGTTGTAGATGTTTTTATCCATCTTCTCGACAGCATGTCCTAGACGTAGCTCCTTCGTACTGACCTTATCTCTGACAAGCAGAGCGGTATAATCATTAGTTCTCTTTTAACAAATAATCATTAAGTCTTTTTGTTGACAAATAGATATAAAAACTTTGACTGTTCATGGCCTGGATGATAGCATCCTGCAGTTCCATCCTTAGGGCACCCTTGGAGAAAATGCTTTGATTGAACACGTACTTTATTAGTTTGAACAAAGTTCGTTGTTTATACACATCTTTTACTCATTAATTAATTAATGGGAGAGAGGTTGCCACATGTAGTTGTAGTTGATTATGCTTAGTATCAAGTTTTCTTTTGTGTGCTGTAGATGCTTCAAAGTCCGGTGTTGCTCAAGAAACAATGCAAAACACTGTTCGTAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCGAGGCAGATTCTTGGTGTCACCGAGGAAACACCTTGGGAAGAAGTTGTAAAGGTCAAATATCTATTGCTTTTCACTAAAATAGTTCCACCCATATATAGATTTTTGACAATCCTTCTCTCACCTATGTAGAAATATGACGCCTTGTTTGAAAGGAATGCTCAAACTGGGAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGATCAAAGGTCAGGATGCCCCTAGCTGAGTGTTTTGAGGAATGTGCTAGTTTTGAACATTTTACTGATCTTGTATAATTTTTATTTTGATTATGGTTGGCAAGGCATGAATGATGAAATTGGTGCCGTCTTTGTTTTTTTTTTTATACATATCATTTCTTTTCTAATTAAAGGTAGGTTCTTGGAGGTAATATGTAAAGTATCATTTGGAGAATTTGCATATATTGCAATATTAACACAAAATAATAGTAAATTTAGATCAAT

mRNA sequence

AGGAAGCCCTAGGCCCAATAATTTGGTTCTTTTCCACCATTGTTTTCTCTGTTTCTCCCTGTGGCAGCCATACCCGAACTCCCTCGCCTATCATATTTCATTTCTTCTTCTCCTTCTCCTTCTCCATTGCTGCATATAGCTCCATCCCAAGCTCTAGCGGCTTAACGATTCTGGACGTGTTGTCAGGGCCAGCCACTTAATCATGGTATATCTCTTCTTTCTTTCTCTCCTCTCTTTTAACTTGATGGGGGATTGGTTACCAAGATAAGGAGAACTAAATATGGAATAAGGAGTATAAACTTAACATATTTTGTTAATCTTATCTGAATTATTATGTTTATGTCTCCTCCATTCAGTAATTTGTTTCCATATTGATTGTTATAATTCATACTTTCATTTCGTTCCTAAGTTTTCTCTGGCTGAAGTTTCGACTTGGGGAAAGACTACAGAGAGTGTTAAGTCTTGTGGAATTTTTCTCCATATTAAATCTTATTTTTCTTTTTTTCCCTCCTATGTATTTGTCTAGATATGTTGGGTTCTTTGTGAAATGATACGATTTTCTTGTCCTCTCCACTTTTTATAGTATCTAAAGTTAAGCATATTATCCTATTTATATATCACTTGTGTCATGTCATGTTATGTACTGTGTACTTCGCCATATATATATTTTATCTATTGAATTAGCACTTCCTAATTAGAACTGGTGCATTTACTTCTTTTGTGTTGGTGAATTAGAGGAGTGGATATGCATAATTTTTGAAGTTAGTCTTTTTCAGTTTGAGAACTTCCTATAAGAGAAGCTCTTTGCTTATATATTTTTGGACAGGCTGCAAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCGAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTGCAAATGCTTCAAAGTCCGGTGTTGCTCAAGAAACAATGCAAAACACTGTTCGTAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCGAGGCAGATTCTTGGTGTCACCGAGGAAACACCTTGGGAAGAAGTTGTAAAGAAATATGACGCCTTGTTTGAAAGGAATGCTCAAACTGGGAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGATCAAAGGTCAGGATGCCCCTAGCTGAGTGTTTTGAGGAATGTGCTAGTTTTGAACATTTTACTGATCTTGTATAATTTTTATTTTGATTATGGTTGGCAAGGCATGAATGATGAAATTGGTGCCGTCTTTGTTTTTTTTTTTATACATATCATTTCTTTTCTAATTAAAGGTAGGTTCTTGGAGGTAATATGTAAAGTATCATTTGGAGAATTTGCATATATTGCAATATTAACACAAAATAATAGTAAATTTAGATCAAT

Coding sequence (CDS)

ATGGGCTCTGGGATACTTGCGAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTGCAAATGCTTCAAAGTCCGGTGTTGCTCAAGAAACAATGCAAAACACTGTTCGTAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCGAGGCAGATTCTTGGTGTCACCGAGGAAACACCTTGGGAAGAAGTTGTAAAGAAATATGACGCCTTGTTTGAAAGGAATGCTCAAACTGGGAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGATCAAAGGTCAGGATGCCCCTAGCTGA

Protein sequence

MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS

Homology

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BLAST of MELO3C025561.2 vs. NCBI nr
Match: XP_008463624.1 (PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo] >XP_008463625.1 PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo] >XP_008463626.1 PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo])

HSP 1 Score: 199.9 bits (507), Expect = 4.3e-48
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE
Sbjct: 12  MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS
Sbjct: 72  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 116

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BLAST of MELO3C025561.2 vs. NCBI nr
Match: XP_004139541.1 (PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis sativus] >XP_011655013.1 PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis sativus] >KGN65052.1 hypothetical protein Csa_1G185100 [Cucumis sativus])

HSP 1 Score: 195.7 bits (496), Expect = 8.1e-47
Identity = 103/105 (98.10%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE
Sbjct: 12  MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           EV KKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ KGQDAPS
Sbjct: 72  EVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 116

[Close]

BLAST of MELO3C025561.2 vs. NCBI nr
Match: XP_022925423.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita moschata])

HSP 1 Score: 190.7 bits (483), Expect = 2.6e-45
Identity = 99/105 (94.29%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGILARAFVQAYRQAL NASKSGVAQET+QNTVRRASKVMTEQEARQILGVT ETPWE
Sbjct: 12  MGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTPETPWE 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           E+VKKYDALFE+NAQTGSFYLQSKVHRAKERLETLYQ KGQDAPS
Sbjct: 72  EIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

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BLAST of MELO3C025561.2 vs. NCBI nr
Match: XP_022963881.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita moschata])

HSP 1 Score: 189.9 bits (481), Expect = 4.4e-45
Identity = 98/105 (93.33%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGILARAFVQAYRQAL NASKSGVAQET+QN+VRRASKVMTEQEARQILG+T ETPWE
Sbjct: 12  MGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQILGITAETPWE 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           E+VKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ KGQDAPS
Sbjct: 72  EIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]

BLAST of MELO3C025561.2 vs. NCBI nr
Match: XP_022155245.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Momordica charantia] >XP_022155246.1 mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Momordica charantia])

HSP 1 Score: 189.5 bits (480), Expect = 5.8e-45
Identity = 99/105 (94.29%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGILARAFVQAYRQALANASKSGVAQET+QNTVRRASKVMTEQEARQILGVTEETPWE
Sbjct: 12  MGSGILARAFVQAYRQALANASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEETPWE 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           E+VKKYD LFERNAQ GSFYLQSKVHRAKERLETLYQ K QDAPS
Sbjct: 72  EIVKKYDTLFERNAQNGSFYLQSKVHRAKERLETLYQSKDQDAPS 116

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BLAST of MELO3C025561.2 vs. TAIR10
Match: AT3G59280.1 (Protein Transporter, Pam16)

HSP 1 Score: 149.4 bits (376), Expect = 1.2e-36
Identity = 77/105 (73.33%), Postives = 88/105 (83.81%), Query Frame = 0


Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGI+ RA  QAYRQALANASKSGVAQE MQN VR+A K +TEQEARQILGVTE+T WE
Sbjct: 12  MGSGIIGRAVFQAYRQALANASKSGVAQEAMQNGVRQAGKAITEQEARQILGVTEKTSWE 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           E+++KYD LFE NA+ GSFYLQSKVHRAKE LE +Y+ +G   PS
Sbjct: 72  EILQKYDKLFENNAKAGSFYLQSKVHRAKECLEVVYRSQGNGTPS 116

[Close]

BLAST of MELO3C025561.2 vs. TAIR10
Match: AT5G61880.1 (Protein Transporter, Pam16)

HSP 1 Score: 127.1 bits (318), Expect = 6.4e-30
Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 0


Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGI+ARA  QAYRQALANASK+GVA E  Q T++R   +  E EARQILGVTE++ W+
Sbjct: 12  MGSGIIARACTQAYRQALANASKTGVAHEATQ-TIKRGLTI-GEAEARQILGVTEKSSWD 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ 98
           E++KKYD LFERNAQ GSFYLQSKVHRAKE LET YQ
Sbjct: 72  EILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

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BLAST of MELO3C025561.2 vs. Swiss-Prot
Match: sp|Q93VV9|TM16B_ARATH (Mitochondrial import inner membrane translocase subunit PAM16 like 2 OS=Arabidopsis thaliana OX=3702 GN=PAM16L2 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.2e-35
Identity = 77/105 (73.33%), Postives = 88/105 (83.81%), Query Frame = 0


Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGI+ RA  QAYRQALANASKSGVAQE MQN VR+A K +TEQEARQILGVTE+T WE
Sbjct: 12  MGSGIIGRAVFQAYRQALANASKSGVAQEAMQNGVRQAGKAITEQEARQILGVTEKTSWE 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           E+++KYD LFE NA+ GSFYLQSKVHRAKE LE +Y+ +G   PS
Sbjct: 72  EILQKYDKLFENNAKAGSFYLQSKVHRAKECLEVVYRSQGNGTPS 116

[Close]

BLAST of MELO3C025561.2 vs. Swiss-Prot
Match: sp|Q93W66|TM16A_ARATH (Mitochondrial import inner membrane translocase subunit PAM16 like 1 OS=Arabidopsis thaliana OX=3702 GN=PAM16L1 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.2e-28
Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 0


Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGI+ARA  QAYRQALANASK+GVA E  Q T++R   +  E EARQILGVTE++ W+
Sbjct: 12  MGSGIIARACTQAYRQALANASKTGVAHEATQ-TIKRGLTI-GEAEARQILGVTEKSSWD 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ 98
           E++KKYD LFERNAQ GSFYLQSKVHRAKE LET YQ
Sbjct: 72  EILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

[Close]

BLAST of MELO3C025561.2 vs. Swiss-Prot
Match: sp|Q6PBL0|TIM16_DANRE (Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio OX=7955 GN=pam16 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.5e-09
Identity = 46/105 (43.81%), Postives = 62/105 (59.05%), Query Frame = 0


Query: 1   MGSGILARAFVQAYRQ--ALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETP 60
           MG+ ++ RAF +A RQ  A + A+     Q   Q+    +   MT QEA+QIL ++  TP
Sbjct: 11  MGAQVVGRAFARALRQEFAASQAAAEARGQAGRQSAAASSFTGMTLQEAQQILNISTLTP 70

Query: 61  WEEVVKKYDALFERN--AQTGSFYLQSKVHRAKERLETLYQIKGQ 102
            EE+ K Y+ LF+ N  A  GSFY+QSKV RAKERL+    I  Q
Sbjct: 71  -EEIQKNYEHLFKVNDKAVGGSFYIQSKVVRAKERLDEELSINQQ 114

[Close]

BLAST of MELO3C025561.2 vs. Swiss-Prot
Match: sp|Q9C1W5|TIM16_SCHPO (Mitochondrial import inner membrane translocase subunit tim16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pam16 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 7.8e-09
Identity = 45/108 (41.67%), Postives = 66/108 (61.11%), Query Frame = 0


Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNT---VRRASKVMTEQEARQILGVTEET 60
           +GS ++++AFVQAY+Q +ANA++    Q     +   VRR    MT QEA  IL +  E+
Sbjct: 13  VGSQVMSKAFVQAYKQMIANAAQQSTGQAAASKSSTAVRRGE--MTIQEAGSILNIKPES 72

Query: 61  PWE-EVVKKYDALFERN--AQTGSFYLQSKVHRAKERLETLYQIKGQD 103
             E E+ K++  +FE N   + GSFYLQSKV RA E+L++    K Q+
Sbjct: 73  LEEGELEKRFQKMFEINDPKKGGSFYLQSKVFRAHEKLKSELDQKIQE 118

[Close]

BLAST of MELO3C025561.2 vs. Swiss-Prot
Match: sp|Q9CQV1|TIM16_MOUSE (Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus OX=10090 GN=Pam16 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-08
Identity = 45/106 (42.45%), Postives = 67/106 (63.21%), Query Frame = 0


Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKV--MTEQEARQILGVTEETP 60
           MG  ++ RAF +A RQ  A +  +  A+    +    AS +  ++ QEA+QIL V++ +P
Sbjct: 11  MGVQVVGRAFARALRQEFAASQAAADARGRAGHQSAAASNLSGLSLQEAQQILNVSKLSP 70

Query: 61  WEEVVKKYDALFERNAQT--GSFYLQSKVHRAKERLETLYQIKGQD 103
            EEV K Y+ LF+ N ++  GSFYLQSKV RAKERL+   +I+ Q+
Sbjct: 71  -EEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELRIQAQE 115

[Close]

BLAST of MELO3C025561.2 vs. TrEMBL
Match: tr|A0A1S3CJP3|A0A1S3CJP3_CUCME (mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo OX=3656 GN=LOC103501727 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.8e-48
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE
Sbjct: 12  MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS
Sbjct: 72  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 116

[Close]

BLAST of MELO3C025561.2 vs. TrEMBL
Match: tr|A0A0A0LW69|A0A0A0LW69_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G185100 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 5.3e-47
Identity = 103/105 (98.10%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE
Sbjct: 12  MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           EV KKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ KGQDAPS
Sbjct: 72  EVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 116

[Close]

BLAST of MELO3C025561.2 vs. TrEMBL
Match: tr|A0A1S3BV59|A0A1S3BV59_CUCME (mitochondrial import inner membrane translocase subunit tim16-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494012 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.4e-39
Identity = 89/104 (85.58%), Postives = 94/104 (90.38%), Query Frame = 0


Query: 2   GSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWEE 61
           GS I+ RA  QAY+QAL NASKSGVAQET+QNTVRRASKVMTEQEARQILGVTEE PWEE
Sbjct: 13  GSVIIGRAIAQAYQQALRNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEE 72

Query: 62  VVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           +VKKYD+LFERNAQTGSFYLQSKVHRAKERLETLY  K QD PS
Sbjct: 73  IVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS 116

[Close]

BLAST of MELO3C025561.2 vs. TrEMBL
Match: tr|A0A067LED2|A0A067LED2_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23812 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 7.0e-39
Identity = 87/105 (82.86%), Postives = 96/105 (91.43%), Query Frame = 0


Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGILARAFVQAYRQALANASKSGVAQET+QNT+R+ SKVMTEQEARQILGVTEET WE
Sbjct: 12  MGSGILARAFVQAYRQALANASKSGVAQETIQNTIRKGSKVMTEQEARQILGVTEETAWE 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           E+VKKYD LFERNA+ GSFYLQSKVHRAKE LE +++ KG+  PS
Sbjct: 72  EIVKKYDTLFERNAKNGSFYLQSKVHRAKECLEAVHRGKGEGTPS 116

[Close]

BLAST of MELO3C025561.2 vs. TrEMBL
Match: tr|A0A2I4HS40|A0A2I4HS40_9ROSI (mitochondrial import inner membrane translocase subunit Tim16 OS=Juglans regia OX=51240 GN=LOC109020904 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.2e-38
Identity = 87/105 (82.86%), Postives = 96/105 (91.43%), Query Frame = 0


Query: 1   MGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWE 60
           MGSGILARA VQAYRQALANASKSGVAQET+QNTVRRASK MTEQEARQILGV+E+T WE
Sbjct: 12  MGSGILARAVVQAYRQALANASKSGVAQETLQNTVRRASKAMTEQEARQILGVSEQTAWE 71

Query: 61  EVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 106
           E++KKYD LFERNA+ GSFYLQSKVHRAKE LE++Y+ KGQ  PS
Sbjct: 72  EILKKYDTLFERNAKNGSFYLQSKVHRAKECLESVYRDKGQGTPS 116

The following BLAST results are available for this feature:

BLAST of MELO3C025561.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463624.1	4.3e-48	100.00	PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumi...	[more]
XP_004139541.1	8.1e-47	98.10	PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumi...	[more]
XP_022925423.1	2.6e-45	94.29	mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucur...	[more]
XP_022963881.1	4.4e-45	93.33	mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucur...	[more]
XP_022155245.1	5.8e-45	94.29	mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Momor...	[more]

BLAST of MELO3C025561.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G59280.1	1.2e-36	73.33	Protein Transporter, Pam16	[more]
AT5G61880.1	6.4e-30	72.16	Protein Transporter, Pam16	[more]

BLAST of MELO3C025561.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q93VV9\|TM16B_ARATH	2.2e-35	73.33	Mitochondrial import inner membrane translocase subunit PAM16 like 2 OS=Arabidop...	[more]
sp\|Q93W66\|TM16A_ARATH	1.2e-28	72.16	Mitochondrial import inner membrane translocase subunit PAM16 like 1 OS=Arabidop...	[more]
sp\|Q6PBL0\|TIM16_DANRE	3.5e-09	43.81	Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio OX=...	[more]
sp\|Q9C1W5\|TIM16_SCHPO	7.8e-09	41.67	Mitochondrial import inner membrane translocase subunit tim16 OS=Schizosaccharom...	[more]
sp\|Q9CQV1\|TIM16_MOUSE	1.0e-08	42.45	Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus OX...	[more]

BLAST of MELO3C025561.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CJP3\|A0A1S3CJP3_CUCME	2.8e-48	100.00	mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo OX...	[more]
tr\|A0A0A0LW69\|A0A0A0LW69_CUCSA	5.3e-47	98.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G185100 PE=4 SV=1	[more]
tr\|A0A1S3BV59\|A0A1S3BV59_CUCME	1.4e-39	85.58	mitochondrial import inner membrane translocase subunit tim16-like isoform X1 OS...	[more]
tr\|A0A067LED2\|A0A067LED2_JATCU	7.0e-39	82.86	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23812 PE=4 SV=1	[more]
tr\|A0A2I4HS40\|A0A2I4HS40_9ROSI	1.2e-38	82.86	mitochondrial import inner membrane translocase subunit Tim16 OS=Juglans regia O...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005744	mitochondrial inner membrane presequence translocase complex

Vocabulary: **Biological Process**
Term	Definition
GO:0030150	protein import into mitochondrial matrix

Vocabulary: **INTERPRO**
Term	Definition
IPR005341	Tim16
IPR036869	J_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030150	protein import into mitochondrial matrix
cellular_component	GO:0005744	mitochondrial inner membrane presequence translocase complex
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025561.2.1	MELO3C025561.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF03656	Pam16	coord: 1..102 e-value: 1.4E-20 score: 73.5
None	No IPR available	PANTHER	PTHR12388:SF2	SUBFAMILY NOT NAMED	coord: 1..97
IPR036869	Chaperone J-domain superfamily	GENE3D	G3DSA:1.10.287.110		coord: 42..100 e-value: 8.4E-18 score: 65.5
IPR005341	Mitochondrial import inner membrane translocase subunit Tim16	PANTHER	PTHR12388	MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULE	coord: 1..97

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C025561.2	Csa1G185100	Cucumber (Chinese Long) v2	cumedB024
MELO3C025561.2	CSPI01G15930	Wild cucumber (PI 183967)	cpimedB025
MELO3C025561.2	Lsi02G011100	Bottle gourd (USVL1VR-Ls)	lsimedB184
MELO3C025561.2	CsGy1G015570	Cucumber (Gy14) v2	cgybmedB022
MELO3C025561.2	Cla009014	Watermelon (97103) v1	medwmB154
MELO3C025561.2	ClCG01G010310	Watermelon (Charleston Gray)	medwcgB126
MELO3C025561.2	Cla97C01G010260	Watermelon (97103) v2	medwmbB126
MELO3C025561.2	CsaV3_1G017160	Cucumber (Chinese Long) v3	cucmedB025

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C025561.2	Cucurbita maxima (Rimu)	cmamedB216
MELO3C025561.2	Cucurbita maxima (Rimu)	cmamedB414
MELO3C025561.2	Cucurbita pepo (Zucchini)	cpemedB033
MELO3C025561.2	Cucurbita pepo (Zucchini)	cpemedB564