CsaV3_1G017160 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G017160
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionmitochondrial import inner membrane translocase subunit tim16
Locationchr1 : 11715430 .. 11717695 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATCTCTCTTCTTTCTTTCTCTCCTCTCTTCTAACTAGTTGGGGCATTGGTTACTCAGATAATGAGAACTAAATATGGAATAAGGAGTATAAACTTAACATACTTTGTTAATTTTATCTGAATTGTTATGTTTATGTCTTCTCCATTCAGTAATTTGTTTCCATATTGATTATAGATTATGGGTATAATTTATACTTTCATTTCTTTCCTAAGTTTTCTCTGGCTGAAGTTTCGACTAGGGGAAAGACTAGAGAGTGTTAAGTCTTGTGGAATTTTTCTCCGTATTAAATCTTAGTTTTCTTTTTTTTCCCTCCTACGTATTTGTCTACATATGTTGGGTTCTTTGTGAAATGATGCGCTTTTCTTGTCCTCTCCACATTTTATAGTATCTGAAGTTGAGCATATTCGAATCCTATATGTATATCGCTTATGTCGTGTCATGTTATTTTTTTTCTCGAGTATACTTTACTATATATATATATTACCTATTGAATTAGCACTTCCTAATTAGAACTGGTGCATTTACTTATTTTCTGTTGATTTCTTTAATTTTGGAAAAGTACAAGAGTGGATGTTGCATAATTTTTAAAGTCGTCATTTTCAGTTTGAGAAATTCCTATAACAGAAGCTCTTTGCTTATATGTTTTTGGACAGGCTGCAAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCGAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTGCAAGTAAGTACACACTTTTTATTCCACCATATTTCCTTCCTATCTCAAATTGGCCAATTTTTCCTCAATATTACTTTTATTTGGTGTAAAATGTTTATGGCTGGCTTGATGGAAACTTGACTTATAAAACAAACGAAACTTTCACCTTGTTCTTGAACTATTAGAAGCTATAAATATAATGTAAATGTCAACTTGGGATGTTTAAGTGTTTTGGCAATAAGAACAAAGTTCTGTGTGCACATAGTTTAATTCTGCTTCAGGTGATAGAAATAGATATCAAAGTAATCTATTACATCCTTCTGGTCTTTTTAAGCTTGAATAGTGTCTTAGATCTTCGGCAAGTGGTCAAAAGAATTCATTATTTTTCAATCCTGTGACATGAACTAGCGATTTGCAAATAAAGAAGGGATTGTTTGCCCCACCAACTTCTTTAGTTGGTGTAAACAACTTTAACTTCAATACTAAACATGATTGTAAATTGCACATTTATTGAGTCATCTTTCCCTATTTTTCTACTTTTCACAATTATCGAGGAAGATTCTACTTTTCGCACTTAGTGAGTACTTTACATTCTCCTCTTTCCCCTATTAGAGCCTGATCCTTAATTCTTCTCGAATAGTAATGTAGATTCCCTTGTTACTAATTGTGGATTAGCGAGCATCTCTTTTCAATCCTTCTGCCTATATTATAATAGAAAGTAGTGAGGAGAGTGCCATCTCCAACCACAAGGGACATTGGAAGGACGGGATGGCAACCCCATTTGTTGTAGATGTGTTTATCCATCTTCTCGACAGCATGTCCTAGGCATAGCTCCTCTGTACTGACCTTATCTCCGATAAGCAGAGCTGTTTATTGGCCTGCCTACCGTTCGAAGGAATTGATTTAATAAGACAGCTCCTAATTTTATATTGCACATATTTTATAATCATTAGTTCGTTTTTCTTTTAACAAATAATCATTGAAAATAGAGTGTTCGTGGCCTGGATGATAGAGTCCTGCAGTTCCATCCTTAGGGTACCCTTGGAGAAAATGCTTTGATTGAACATGTACCTTATTAGTTTGAACAAAGTTGGTTGTTTATACACAGCTTTTACTTATTAACTAATTAATGGGACAGAGGTTGGCACCTGTAGTTGTAGTTTATTCATTATTATGCTTAGTATCAAGTTTTCTTTTGTGTGCTGTAGATGCTTCAAAGTCTGGTGTTGCTCAAGAGACAATGCAAAACACTGTTCGTAGAGCAAGCAAAGTGATGACGGAGCAAGAAGCGAGGCAGATTCTTGGTGTCACCGAGGAAACGCCTTGGGAAGAAGTTGCAAAGGTCAAATATCTATTGCTTTTCACTAAAATAGTTCTGGCTATATATAGATTTTGACAACCTTCTCTTACCTATGCAGAAATATGACGCCTTGTTTGAAAGAAATGCTCAAACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGAACAAAGGTCAGGATGCCCCTAGCTGA

mRNA sequence

ATGGCTGCAAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCGAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTGCAAATGCTTCAAAGTCTGGTGTTGCTCAAGAGACAATGCAAAACACTGTTCGTAGAGCAAGCAAAGTGATGACGGAGCAAGAAGCGAGGCAGATTCTTGGTGTCACCGAGGAAACGCCTTGGGAAGAAGTTGCAAAGAAATATGACGCCTTGTTTGAAAGAAATGCTCAAACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGAACAAAGGTCAGGATGCCCCTAGCTGA

Coding sequence (CDS)

ATGGCTGCAAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCGAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTGCAAATGCTTCAAAGTCTGGTGTTGCTCAAGAGACAATGCAAAACACTGTTCGTAGAGCAAGCAAAGTGATGACGGAGCAAGAAGCGAGGCAGATTCTTGGTGTCACCGAGGAAACGCCTTGGGAAGAAGTTGCAAAGAAATATGACGCCTTGTTTGAAAGAAATGCTCAAACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGAACAAAGGTCAGGATGCCCCTAGCTGA

Protein sequence

MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS
Homology
[Close]
BLAST of CsaV3_1G017160 vs. NCBI nr
Match: XP_004139541.1 (PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis sativus] >XP_011655013.1 PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis sativus] >KGN65052.1 hypothetical protein Csa_1G185100 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 3.8e-53
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS
Sbjct: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 116

[Close]
BLAST of CsaV3_1G017160 vs. NCBI nr
Match: XP_008463624.1 (PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo] >XP_008463625.1 PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo] >XP_008463626.1 PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo])

HSP 1 Score: 211.8 bits (538), Expect = 1.2e-51
Identity = 114/116 (98.28%), Postives = 114/116 (98.28%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGVTEETPWEEV KKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ KGQDAPS
Sbjct: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 116

[Close]
BLAST of CsaV3_1G017160 vs. NCBI nr
Match: XP_022925423.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita moschata])

HSP 1 Score: 206.5 bits (524), Expect = 5.1e-50
Identity = 109/116 (93.97%), Postives = 113/116 (97.41%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QNTVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGVT ETPWEE+ KKYDALFE+NAQTGSFYLQSKVHRAKERLETLYQ+KGQDAPS
Sbjct: 61  ILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]
BLAST of CsaV3_1G017160 vs. NCBI nr
Match: XP_022963881.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita moschata])

HSP 1 Score: 205.7 bits (522), Expect = 8.7e-50
Identity = 108/116 (93.10%), Postives = 113/116 (97.41%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QN+VRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILG+T ETPWEE+ KKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ+KGQDAPS
Sbjct: 61  ILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]
BLAST of CsaV3_1G017160 vs. NCBI nr
Match: XP_022155245.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Momordica charantia] >XP_022155246.1 mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Momordica charantia])

HSP 1 Score: 205.3 bits (521), Expect = 1.1e-49
Identity = 109/116 (93.97%), Postives = 112/116 (96.55%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQET+QNTVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETIQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGVTEETPWEE+ KKYD LFERNAQ GSFYLQSKVHRAKERLETLYQ+K QDAPS
Sbjct: 61  ILGVTEETPWEEIVKKYDTLFERNAQNGSFYLQSKVHRAKERLETLYQSKDQDAPS 116

[Close]
BLAST of CsaV3_1G017160 vs. TAIR10
Match: AT3G59280.1 (Protein Transporter, Pam16)

HSP 1 Score: 162.5 bits (410), Expect = 1.5e-40
Identity = 85/116 (73.28%), Postives = 98/116 (84.48%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MA ++LANLIVMGSGI+ RA  QAYRQALANASKSGVAQE MQN VR+A K +TEQEARQ
Sbjct: 1   MAGRLLANLIVMGSGIIGRAVFQAYRQALANASKSGVAQEAMQNGVRQAGKAITEQEARQ 60

Query: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGVTE+T WEE+ +KYD LFE NA+ GSFYLQSKVHRAKE LE +Y+++G   PS
Sbjct: 61  ILGVTEKTSWEEILQKYDKLFENNAKAGSFYLQSKVHRAKECLEVVYRSQGNGTPS 116

[Close]
BLAST of CsaV3_1G017160 vs. TAIR10
Match: AT5G61880.1 (Protein Transporter, Pam16)

HSP 1 Score: 138.3 bits (347), Expect = 3.1e-33
Identity = 77/108 (71.30%), Postives = 90/108 (83.33%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAA++LA++IVMGSGI+ARA  QAYRQALANASK+GVA E  Q T++R   +  E EARQ
Sbjct: 1   MAARVLASVIVMGSGIIARACTQAYRQALANASKTGVAHEATQ-TIKRGLTI-GEAEARQ 60

Query: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ 109
           ILGVTE++ W+E+ KKYD LFERNAQ GSFYLQSKVHRAKE LET YQ
Sbjct: 61  ILGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

[Close]
BLAST of CsaV3_1G017160 vs. Swiss-Prot
Match: sp|Q93VV9|TM16B_ARATH (Mitochondrial import inner membrane translocase subunit PAM16 like 2 OS=Arabidopsis thaliana OX=3702 GN=PAM16L2 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.8e-39
Identity = 85/116 (73.28%), Postives = 98/116 (84.48%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MA ++LANLIVMGSGI+ RA  QAYRQALANASKSGVAQE MQN VR+A K +TEQEARQ
Sbjct: 1   MAGRLLANLIVMGSGIIGRAVFQAYRQALANASKSGVAQEAMQNGVRQAGKAITEQEARQ 60

Query: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGVTE+T WEE+ +KYD LFE NA+ GSFYLQSKVHRAKE LE +Y+++G   PS
Sbjct: 61  ILGVTEKTSWEEILQKYDKLFENNAKAGSFYLQSKVHRAKECLEVVYRSQGNGTPS 116

[Close]
BLAST of CsaV3_1G017160 vs. Swiss-Prot
Match: sp|Q93W66|TM16A_ARATH (Mitochondrial import inner membrane translocase subunit PAM16 like 1 OS=Arabidopsis thaliana OX=3702 GN=PAM16L1 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 5.6e-32
Identity = 77/108 (71.30%), Postives = 90/108 (83.33%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAA++LA++IVMGSGI+ARA  QAYRQALANASK+GVA E  Q T++R   +  E EARQ
Sbjct: 1   MAARVLASVIVMGSGIIARACTQAYRQALANASKTGVAHEATQ-TIKRGLTI-GEAEARQ 60

Query: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ 109
           ILGVTE++ W+E+ KKYD LFERNAQ GSFYLQSKVHRAKE LET YQ
Sbjct: 61  ILGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

[Close]
BLAST of CsaV3_1G017160 vs. Swiss-Prot
Match: sp|Q6PBL0|TIM16_DANRE (Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio OX=7955 GN=pam16 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.9e-11
Identity = 50/106 (47.17%), Postives = 67/106 (63.21%), Query Frame = 0 

Query: 3   AKILANLIVMGSGILARAFVQAYRQ--ALANASKSGVAQETMQNTVRRASKVMTEQEARQ 62
           AK LA +IVMG+ ++ RAF +A RQ  A + A+     Q   Q+    +   MT QEA+Q
Sbjct: 2   AKYLAQIIVMGAQVVGRAFARALRQEFAASQAAAEARGQAGRQSAAASSFTGMTLQEAQQ 61

Query: 63  ILGVTEETPWEEVAKKYDALFERN--AQTGSFYLQSKVHRAKERLE 105
           IL ++  TP EE+ K Y+ LF+ N  A  GSFY+QSKV RAKERL+
Sbjct: 62  ILNISTLTP-EEIQKNYEHLFKVNDKAVGGSFYIQSKVVRAKERLD 106

[Close]
BLAST of CsaV3_1G017160 vs. Swiss-Prot
Match: sp|Q9CQV1|TIM16_MOUSE (Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus OX=10090 GN=Pam16 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.6e-10
Identity = 50/115 (43.48%), Postives = 73/115 (63.48%), Query Frame = 0 

Query: 3   AKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKV--MTEQEARQ 62
           AK LA +IVMG  ++ RAF +A RQ  A +  +  A+    +    AS +  ++ QEA+Q
Sbjct: 2   AKYLAQIIVMGVQVVGRAFARALRQEFAASQAAADARGRAGHQSAAASNLSGLSLQEAQQ 61

Query: 63  ILGVTEETPWEEVAKKYDALFERNAQT--GSFYLQSKVHRAKERLETLYQNKGQD 114
           IL V++ +P EEV K Y+ LF+ N ++  GSFYLQSKV RAKERL+   + + Q+
Sbjct: 62  ILNVSKLSP-EEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELRIQAQE 115

[Close]
BLAST of CsaV3_1G017160 vs. Swiss-Prot
Match: sp|Q9Y3D7|TIM16_HUMAN (Mitochondrial import inner membrane translocase subunit TIM16 OS=Homo sapiens OX=9606 GN=PAM16 PE=1 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-10
Identity = 50/115 (43.48%), Postives = 73/115 (63.48%), Query Frame = 0 

Query: 3   AKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKV--MTEQEARQ 62
           AK LA +IVMG  ++ RAF +A RQ  A +  +  A+    +    AS +  ++ QEA+Q
Sbjct: 2   AKYLAQIIVMGVQVVGRAFARALRQEFAASRAAADARGRAGHRSAAASNLSGLSLQEAQQ 61

Query: 63  ILGVTEETPWEEVAKKYDALFERNAQT--GSFYLQSKVHRAKERLETLYQNKGQD 114
           IL V++ +P EEV K Y+ LF+ N ++  GSFYLQSKV RAKERL+   + + Q+
Sbjct: 62  ILNVSKLSP-EEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELKIQAQE 115

[Close]
BLAST of CsaV3_1G017160 vs. TrEMBL
Match: tr|A0A0A0LW69|A0A0A0LW69_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G185100 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.5e-53
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS
Sbjct: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 116

[Close]
BLAST of CsaV3_1G017160 vs. TrEMBL
Match: tr|A0A1S3CJP3|A0A1S3CJP3_CUCME (mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo OX=3656 GN=LOC103501727 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 8.0e-52
Identity = 114/116 (98.28%), Postives = 114/116 (98.28%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGVTEETPWEEV KKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ KGQDAPS
Sbjct: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 116

[Close]
BLAST of CsaV3_1G017160 vs. TrEMBL
Match: tr|A0A2I4HS40|A0A2I4HS40_9ROSI (mitochondrial import inner membrane translocase subunit Tim16 OS=Juglans regia OX=51240 GN=LOC109020904 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.0e-43
Identity = 98/116 (84.48%), Postives = 107/116 (92.24%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARA VQAYRQALANASKSGVAQET+QNTVRRASK MTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAVVQAYRQALANASKSGVAQETLQNTVRRASKAMTEQEARQ 60

Query: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGV+E+T WEE+ KKYD LFERNA+ GSFYLQSKVHRAKE LE++Y++KGQ  PS
Sbjct: 61  ILGVSEQTAWEEILKKYDTLFERNAKNGSFYLQSKVHRAKECLESVYRDKGQGTPS 116

[Close]
BLAST of CsaV3_1G017160 vs. TrEMBL
Match: tr|A0A059AV82|A0A059AV82_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H00433 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.0e-43
Identity = 97/116 (83.62%), Postives = 106/116 (91.38%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMG GI+ARA VQAYRQALANASK+GVAQET+QNTVRRASK MTEQEARQ
Sbjct: 1   MAAKILANLIVMGGGIMARALVQAYRQALANASKTGVAQETLQNTVRRASKAMTEQEARQ 60

Query: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGVTEET WE++ KKYDALFERNA+ GSFY+QSKVHRAKE LE++YQ KGQ  PS
Sbjct: 61  ILGVTEETAWEDILKKYDALFERNAKNGSFYIQSKVHRAKECLESVYQGKGQSNPS 116

[Close]
BLAST of CsaV3_1G017160 vs. TrEMBL
Match: tr|A0A067LED2|A0A067LED2_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23812 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.0e-43
Identity = 97/116 (83.62%), Postives = 106/116 (91.38%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQET+QNT+R+ SKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETIQNTIRKGSKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGVTEET WEE+ KKYD LFERNA+ GSFYLQSKVHRAKE LE +++ KG+  PS
Sbjct: 61  ILGVTEETAWEEIVKKYDTLFERNAKNGSFYLQSKVHRAKECLEAVHRGKGEGTPS 116

The following BLAST results are available for this feature:
BLAST of CsaV3_1G017160 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139541.13.8e-53100.00PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumi... [more]
XP_008463624.11.2e-5198.28PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumi... [more]
XP_022925423.15.1e-5093.97mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucur... [more]
XP_022963881.18.7e-5093.10mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucur... [more]
XP_022155245.11.1e-4993.97mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Momor... [more]
BLAST of CsaV3_1G017160 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G59280.11.5e-4073.28Protein Transporter, Pam16[more]
AT5G61880.13.1e-3371.30Protein Transporter, Pam16[more]
BLAST of CsaV3_1G017160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q93VV9|TM16B_ARATH2.8e-3973.28Mitochondrial import inner membrane translocase subunit PAM16 like 2 OS=Arabidop... [more]
sp|Q93W66|TM16A_ARATH5.6e-3271.30Mitochondrial import inner membrane translocase subunit PAM16 like 1 OS=Arabidop... [more]
sp|Q6PBL0|TIM16_DANRE1.9e-1147.17Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio OX=... [more]
sp|Q9CQV1|TIM16_MOUSE1.6e-1043.48Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus OX... [more]
sp|Q9Y3D7|TIM16_HUMAN2.1e-1043.48Mitochondrial import inner membrane translocase subunit TIM16 OS=Homo sapiens OX... [more]
BLAST of CsaV3_1G017160 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LW69|A0A0A0LW69_CUCSA2.5e-53100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G185100 PE=4 SV=1[more]
tr|A0A1S3CJP3|A0A1S3CJP3_CUCME8.0e-5298.28mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo OX... [more]
tr|A0A2I4HS40|A0A2I4HS40_9ROSI1.0e-4384.48mitochondrial import inner membrane translocase subunit Tim16 OS=Juglans regia O... [more]
tr|A0A059AV82|A0A059AV82_EUCGR1.0e-4383.62Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H00433 PE=4 SV... [more]
tr|A0A067LED2|A0A067LED2_JATCU1.0e-4383.62Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_23812 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0030150protein import into mitochondrial matrix
Vocabulary: Cellular Component
TermDefinition
GO:0005744mitochondrial inner membrane presequence translocase complex
Vocabulary: INTERPRO
TermDefinition
IPR005341Tim16
IPR036869J_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030150 protein import into mitochondrial matrix
cellular_component GO:0005744 mitochondrial inner membrane presequence translocase complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G017160.1CsaV3_1G017160.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036869Chaperone J-domain superfamilyGENE3DG3DSA:1.10.287.110coord: 53..111
e-value: 4.3E-18
score: 66.4
NoneNo IPR availablePFAMPF03656Pam16coord: 1..111
e-value: 8.2E-23
score: 80.7
NoneNo IPR availablePANTHERPTHR12388:SF2SUBFAMILY NOT NAMEDcoord: 1..109
IPR005341Mitochondrial import inner membrane translocase subunit Tim16PANTHERPTHR12388MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULEcoord: 1..109

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G017160CSPI01G15930Wild cucumber (PI 183967)cpicucB001
CsaV3_1G017160CsGy1G015570Cucumber (Gy14) v2cgybcucB002
CsaV3_1G017160Cla009014Watermelon (97103) v1cucwmB057
CsaV3_1G017160MELO3C025561Melon (DHL92) v3.5.1cucmeB014
CsaV3_1G017160ClCG01G010310Watermelon (Charleston Gray)cucwcgB024
CsaV3_1G017160Lsi02G011100Bottle gourd (USVL1VR-Ls)cuclsiB033
CsaV3_1G017160MELO3C025561.2Melon (DHL92) v3.6.1cucmedB025
CsaV3_1G017160Cla97C01G010260Watermelon (97103) v2cucwmbB008
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G017160Cucurbita maxima (Rimu)cmacucB0241
CsaV3_1G017160Cucurbita moschata (Rifu)cmocucB0228
CsaV3_1G017160Cucurbita pepo (Zucchini)cpecucB0021
CsaV3_1G017160Cucurbita pepo (Zucchini)cpecucB0640
CsaV3_1G017160Wax gourdcucwgoB039
CsaV3_1G017160Wax gourdcucwgoB063
CsaV3_1G017160Silver-seed gourdcarcucB1083