MELO3C025561 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C025561
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionMitochondrial import inner membrane translocase subunit tim16
Locationchr12 : 13489025 .. 13492073 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGAAGCCCTAGGCCCAATAATTTGGTTCTTTTCCACCATTGTTTTCTCTGTTTCTCCCTGTGGCAGCCATACCCGAACTCCCTCGCCTATCATATTTCATTTCTTCTTCTCCTTCTCCTTCTCCATTGCTGCATATAGCTCCATCCCAAGGTCTGTTCTATTTTTCTTCGCTTTCTTACGTTATTATTATTATTTTCTTTTTATTCTTTACAATCCTCTTTCTTCATTATTCTTGCCCATTTTTCTTCCTTAGCTCCCCATCATTAATCTCATCTTCTTCCTCTTCTCTCTCTTTTCCATCTATAATTCAACAATCTTCCCCAATTTTATTTTCAAATCTTGCCAGATTAAGTTTCGTGTCTTGTGGGGTTCATACGTTCGCCCATCCTTAAGTATCCACAATTCTTTTTCTTTTTTCTAGGTTAGATATCCATATTGAATGATATTTCAATTTCTAATCCAAATATTTTATCTGAGATTTTAAACCCCAAATAAAACGAAATAACCCCTAAGATTCCTTGCATGGTTGATTAAATAGCTTCTCTGGTTGATTTTGCAGCTCTAGCGGCTTAACGATTCTGGACGTGTTGTCAGGGCCAGCCACTTAATCATGGTATATCTCTTCTTTCTTTCTCTCCTCTCTTTTAACTTGATGGGGGATTGGTTACCAAGATAAGGAGAACTAAATATGGAATAAGGAGTATAAACTTAACATATTTTGTTAATCTTATCTGAATTATTATGTTTATGTCTCCTCCATTCAGTAATTTGTTTCCATATTGATTGTTATAATTCATACTTTCATTTCGTTCCTAAGTTTTCTCTGGCTGAAGTTTCGACTTGGGGAAAGACTACAGAGAGTGTTAAGTCTTGTGGAATTTTTCTCCATATTAAATCTTATTTTTCTTTTTTTTTAACCCTCCTATGTATTTGTCTAGATATGTTGGGTTCTTTGTGAAATGATACGATTTTCTTGTCCTCTCCACTTTTTATAGTATCTAAAGTTAAGCATATTATCCTATTTATATATCACTTGTGTCATGTCATGTTATGTACTGTGTACTTCGCCATATATATATTTTATCTATTGAATTAGCACTTCCTAATTAGAACTGGTGCATTTACTTCTTTTGTGTTGGTGAATTAGAGGAGTGGATATGCATAATTTTTGAAGTTAGTCTTTTTCAGTTTGAGAACTTCCTATAAGAGAAGCTCTTTGCTTATATATTTTTGGACAGGCTGCAAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCGAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTGCAAGTAAGTATACTCTTTTTTATTCCACCATTTTTCCCCCTCCTATCACAAATTGGCCAATTTTTCCTCGATATCATTTTTATTGGTGTAAAATGTTTACGGCTGGCTTGATGGAAACTTGACTTATAGAACAAAAGAAACTTTCACCTTGTCCTTGAACTATTAGAAGCTATAATTATAATGCAAATGCCAACTTGGGATGTTTAAGTGTTTTGGCAATACAAAGTTCTGTGTGCACATAGTTTAATTCTGCTTCAGGTGATAGAAATAGATATCAAAGTAATCTATTACATCCTTCTCATCTTCTTAACCTTGAATAGTGTCTTAGATCTTCGGCAAGTGGTCAAAAGAATTTGTTATTTTTCTATCCTGTGACATGAACTAGCGATTTGCAAACAAAAAAAAAAAAAAAGGATCGCTTGTCCCACCAACTTTTTAAGTTGGTGTAAACAGCTTAACTTCAATACTAAACATGATTGAAATTTGGACATTTATTGAGTCATCTTTCCCTATTTTTCTATTTTTCACAGTTATTGAGGAACTCCATCTTCTCTCTATCTCTACTTTTCACATTTGTTAAATACTCTACATTCTCCTCCTTCTCCTATTAGAGCGTGATCCTTGATTCTTCTCTATTGGTAATGGAAATTCTCTTGTTACTAATTGTGGATTAGTGAGCATCTCTCTTAAATCCTTCTGCCTATATAATAAAAGAAAGTAGTGAGGAGAGTGCCAACTCCAACCCCGAGGGACGTTGGAAGGATGAGATGGCACCCCATTCGTTGTAGATGTTTTTATCCATCTTCTCGACAGCATGTCCTAGACGTAGCTCCTTCGTACTGACCTTATCTCTGACAAGCAGAGCGGTATAATCATTAGTTCTCTTTTAACAAATAATCATTAAGTCTTTTTGTTGACAAATAGATATAAAAACTTTGACTGTTCATGGCCTGGATGATAGCATCCTGCAGTTCCATCCTTAGGGCACCCTTGGAGAAAATGCTTTGATTGAACACGTACTTTATTAGTTTGAACAAAGTTCGTTGTTTATACACATCTTTTACTCATTAATTAATTAATGGGAGAGAGGTTGCCACATGTAGTTGTAGTTGATTATGCTTAGTATCAAGTTTTCTTTTGTGTGCTGTAGATGCTTCAAAGTCCGGTGTTGCTCAAGAAACAATGCAAAACACTGTTCGTAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCGAGGCAGATTCTTGGTGTCACCGAGGAAACACCTTGGGAAGAAGTTGTAAAGGTCAAATATCTATTGCTTTTCACTAAAATAGTTCCACCCATATATAGATTTTTGACAATCCTTCTCTCACCTATGTAGAAATATGACGCCTTGTTTGAAAGGAATGCTCAAACTGGGAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGATCAAAGGTCAGGATGCCCCTAGCTGAGTGTTTTGAGGAATGTGCTAGTTTTGAACATTTTACTGATCTTGTATAATTTTTATTTTGATTATGGTTGGCAAGGCATGAATGATGAAATTGGTGCCGTCTTTGTTTTTTTTTTATTACATATCATTTCTTTTCTAATTAAAGGTAGGTTCTTGGAGGTAATATGTAAAGTATCATTTGGAGAATTTGCATATATTGCAATATTAACACAAAATAATAGTAAATTTAGATCAAT

mRNA sequence

AGGAAGCCCTAGGCCCAATAATTTGGTTCTTTTCCACCATTGTTTTCTCTGTTTCTCCCTGTGGCAGCCATACCCGAACTCCCTCGCCTATCATATTTCATTTCTTCTTCTCCTTCTCCTTCTCCATTGCTGCATATAGCTCCATCCCAAGCTCTAGCGGCTTAACGATTCTGGACGTGTTGTCAGGGCCAGCCACTTAATCATGATGCTTCAAAGTCCGGTGTTGCTCAAGAAACAATGCAAAACACTGTTCGTAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCGAGGCAGATTCTTGGTGTCACCGAGGAAACACCTTGGGAAGAAGTTGTAAAGAAATATGACGCCTTGTTTGAAAGGAATGCTCAAACTGGGAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGATCAAAGGTCAGGATGCCCCTAGCTGAGTGTTTTGAGGAATGTGCTAGTTTTGAACATTTTACTGATCTTGTATAATTTTTATTTTGATTATGGTTGGCAAGGCATGAATGATGAAATTGGTGCCGTCTTTGTTTTTTTTTTATTACATATCATTTCTTTTCTAATTAAAGGTAGGTTCTTGGAGGTAATATGTAAAGTATCATTTGGAGAATTTGCATATATTGCAATATTAACACAAAATAATAGTAAATTTAGATCAAT

Coding sequence (CDS)

ATGCAAAACACTGTTCGTAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCGAGGCAGATTCTTGGTGTCACCGAGGAAACACCTTGGGAAGAAGTTGTAAAGAAATATGACGCCTTGTTTGAAAGGAATGCTCAAACTGGGAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGATCAAAGGTCAGGATGCCCCTAGCTGA
Homology
[Close]
BLAST of MELO3C025561 vs. Swiss-Prot
Match: TIM16_DANRE (Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio GN=pam16 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.2e-14
Identity = 52/114 (45.61%), Postives = 67/114 (58.77%), Query Frame = 1 

Query: 3   AKILANLIVMGSGILARAFVQAYRQ--ALANASKSGVAQETMQNTVRRASKVMTEQEARQ 62
           AK LA +IVMG+ ++ RAF +A RQ  A + A+     Q   Q+    +   MT QEA+Q
Sbjct: 2   AKYLAQIIVMGAQVVGRAFARALRQEFAASQAAAEARGQAGRQSAAASSFTGMTLQEAQQ 61

Query: 63  ILGVTEETPWEEVVKKYDALFERN--AQTGSFYLQSKVHRAKERLETLYQIKGQ 113
           IL ++  TP EE+ K Y+ LF+ N  A  GSFY+QSKV RAKERL+    I  Q
Sbjct: 62  ILNISTLTP-EEIQKNYEHLFKVNDKAVGGSFYIQSKVVRAKERLDEELSINQQ 114

[Close]
BLAST of MELO3C025561 vs. Swiss-Prot
Match: TIM16_MOUSE (Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus GN=Pam16 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-13
Identity = 51/115 (44.35%), Postives = 72/115 (62.61%), Query Frame = 1 

Query: 3   AKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKV--MTEQEARQ 62
           AK LA +IVMG  ++ RAF +A RQ  A +  +  A+    +    AS +  ++ QEA+Q
Sbjct: 2   AKYLAQIIVMGVQVVGRAFARALRQEFAASQAAADARGRAGHQSAAASNLSGLSLQEAQQ 61

Query: 63  ILGVTEETPWEEVVKKYDALFERNAQT--GSFYLQSKVHRAKERLETLYQIKGQD 114
           IL V++ +P EEV K Y+ LF+ N ++  GSFYLQSKV RAKERL+   +I+ Q+
Sbjct: 62  ILNVSKLSP-EEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELRIQAQE 115

[Close]
BLAST of MELO3C025561 vs. Swiss-Prot
Match: TIM16_HUMAN (Mitochondrial import inner membrane translocase subunit TIM16 OS=Homo sapiens GN=PAM16 PE=1 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 2.0e-13
Identity = 51/115 (44.35%), Postives = 72/115 (62.61%), Query Frame = 1 

Query: 3   AKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKV--MTEQEARQ 62
           AK LA +IVMG  ++ RAF +A RQ  A +  +  A+    +    AS +  ++ QEA+Q
Sbjct: 2   AKYLAQIIVMGVQVVGRAFARALRQEFAASRAAADARGRAGHRSAAASNLSGLSLQEAQQ 61

Query: 63  ILGVTEETPWEEVVKKYDALFERNAQT--GSFYLQSKVHRAKERLETLYQIKGQD 114
           IL V++ +P EEV K Y+ LF+ N ++  GSFYLQSKV RAKERL+   +I+ Q+
Sbjct: 62  ILNVSKLSP-EEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELKIQAQE 115

[Close]
BLAST of MELO3C025561 vs. Swiss-Prot
Match: TI16B_XENLA (Mitochondrial import inner membrane translocase subunit tim16-B OS=Xenopus laevis GN=pam16-b PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-12
Identity = 51/115 (44.35%), Postives = 68/115 (59.13%), Query Frame = 1 

Query: 3   AKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTE---QEAR 62
           AK LA +++MG  ++ RAF +A RQ  A ASK+         T   A   ++    QEA+
Sbjct: 2   AKYLAQIVLMGVQVVGRAFTRALRQEFA-ASKTAAEARGRAGTESAAVSSLSGISFQEAQ 61

Query: 63  QILGVTEETPWEEVVKKYDALFERN--AQTGSFYLQSKVHRAKERLETLYQIKGQ 113
           QIL V++ TP EE+ K Y+ LF+ N  A  GSFYLQSKV RAKERL+   +I+ +
Sbjct: 62  QILNVSKLTP-EEIQKNYEHLFKVNDKAVGGSFYLQSKVVRAKERLDQEMEIQSK 114

[Close]
BLAST of MELO3C025561 vs. Swiss-Prot
Match: TI16A_XENLA (Mitochondrial import inner membrane translocase subunit tim16-A OS=Xenopus laevis GN=pam16-a PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.8e-12
Identity = 48/114 (42.11%), Postives = 68/114 (59.65%), Query Frame = 1 

Query: 3   AKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKV--MTEQEARQ 62
           AK LA ++VMG  ++ RAF +A RQ  A +  +  A+          S +  ++ QEA+Q
Sbjct: 2   AKYLAQIVVMGMQVVGRAFTRALRQEFAASKVAAEARGRAGTESAAVSSLSGISLQEAQQ 61

Query: 63  ILGVTEETPWEEVVKKYDALFERNAQT--GSFYLQSKVHRAKERLETLYQIKGQ 113
           IL V++ TP EE+ K Y+ LF+ N +   GSFYLQSKV RAKERL+   +I+ +
Sbjct: 62  ILNVSKLTP-EEIQKNYEHLFKVNDKGLGGSFYLQSKVVRAKERLDQEMEIQSK 114

[Close]
BLAST of MELO3C025561 vs. TrEMBL
Match: A0A0A0LW69_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G185100 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.6e-54
Identity = 114/116 (98.28%), Postives = 114/116 (98.28%), Query Frame = 1 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 117
           ILGVTEETPWEEV KKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ KGQDAPS
Sbjct: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 116

[Close]
BLAST of MELO3C025561 vs. TrEMBL
Match: A0A067LED2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23812 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.1e-46
Identity = 98/116 (84.48%), Postives = 107/116 (92.24%), Query Frame = 1 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQET+QNT+R+ SKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETIQNTIRKGSKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 117
           ILGVTEET WEE+VKKYD LFERNA+ GSFYLQSKVHRAKE LE +++ KG+  PS
Sbjct: 61  ILGVTEETAWEEIVKKYDTLFERNAKNGSFYLQSKVHRAKECLEAVHRGKGEGTPS 116

[Close]
BLAST of MELO3C025561 vs. TrEMBL
Match: A0A059AV82_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00433 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.6e-46
Identity = 97/116 (83.62%), Postives = 107/116 (92.24%), Query Frame = 1 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMG GI+ARA VQAYRQALANASK+GVAQET+QNTVRRASK MTEQEARQ
Sbjct: 1   MAAKILANLIVMGGGIMARALVQAYRQALANASKTGVAQETLQNTVRRASKAMTEQEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 117
           ILGVTEET WE+++KKYDALFERNA+ GSFY+QSKVHRAKE LE++YQ KGQ  PS
Sbjct: 61  ILGVTEETAWEDILKKYDALFERNAKNGSFYIQSKVHRAKECLESVYQGKGQSNPS 116

[Close]
BLAST of MELO3C025561 vs. TrEMBL
Match: A0A0A0LSD2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G011490 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.8e-45
Identity = 96/116 (82.76%), Postives = 105/116 (90.52%), Query Frame = 1 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILA+LIV GS ++ RA  QAY+QA+ NAS SGVAQET++NTVRRASKVMTEQEARQ
Sbjct: 1   MAAKILAHLIVSGSVVIGRAVAQAYQQAIRNASNSGVAQETIRNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 117
           ILGVTEE PWEE+VKKYDALFERNAQTGSFYLQSKVHRAKERLETL+  KGQD PS
Sbjct: 61  ILGVTEEMPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLHHSKGQDGPS 116

[Close]
BLAST of MELO3C025561 vs. TrEMBL
Match: C6T494_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-44
Identity = 96/116 (82.76%), Postives = 103/116 (88.79%), Query Frame = 1 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMG GILARA VQAYRQAL NASK+GVAQET+QNT+RRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGGGILARAVVQAYRQALTNASKNGVAQETIQNTMRRASKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 117
           ILGVTEETPWEE++KKYD LFE NA+ GSFYLQSKVHRAKE LE + Q K Q  PS
Sbjct: 61  ILGVTEETPWEEIIKKYDNLFENNAKNGSFYLQSKVHRAKECLEAVQQGKSQGTPS 116

[Close]
BLAST of MELO3C025561 vs. TAIR10
Match: AT3G59280.1 (AT3G59280.1 Protein Transporter, Pam16)

HSP 1 Score: 170.2 bits (430), Expect = 7.3e-43
Identity = 85/116 (73.28%), Postives = 96/116 (82.76%), Query Frame = 1 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MA ++LANLIVMGSGI+ RA  QAYRQALANASKSGVAQE MQN VR+A K +TEQEARQ
Sbjct: 1   MAGRLLANLIVMGSGIIGRAVFQAYRQALANASKSGVAQEAMQNGVRQAGKAITEQEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 117
           ILGVTE+T WEE+++KYD LFE NA+ GSFYLQSKVHRAKE LE +Y+ +G   PS
Sbjct: 61  ILGVTEKTSWEEILQKYDKLFENNAKAGSFYLQSKVHRAKECLEVVYRSQGNGTPS 116

[Close]
BLAST of MELO3C025561 vs. TAIR10
Match: AT5G61880.1 (AT5G61880.1 Protein Transporter, Pam16)

HSP 1 Score: 147.1 bits (370), Expect = 6.6e-36
Identity = 77/108 (71.30%), Postives = 89/108 (82.41%), Query Frame = 1 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAA++LA++IVMGSGI+ARA  QAYRQALANASK+GVA E  Q T++R   +  E EARQ
Sbjct: 1   MAARVLASVIVMGSGIIARACTQAYRQALANASKTGVAHEATQ-TIKRGLTI-GEAEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ 109
           ILGVTE++ W+E++KKYD LFERNAQ GSFYLQSKVHRAKE LET YQ
Sbjct: 61  ILGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

[Close]
BLAST of MELO3C025561 vs. NCBI nr
Match: gi|659127284|ref|XP_008463624.1| (PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo])

HSP 1 Score: 224.2 bits (570), Expect = 1.2e-55
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 117
           ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS
Sbjct: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 116

[Close]
BLAST of MELO3C025561 vs. NCBI nr
Match: gi|449443552|ref|XP_004139541.1| (PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis sativus])

HSP 1 Score: 219.9 bits (559), Expect = 2.3e-54
Identity = 114/116 (98.28%), Postives = 114/116 (98.28%), Query Frame = 1 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 117
           ILGVTEETPWEEV KKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ KGQDAPS
Sbjct: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 116

[Close]
BLAST of MELO3C025561 vs. NCBI nr
Match: gi|802559894|ref|XP_012066242.1| (PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Jatropha curcas])

HSP 1 Score: 193.0 bits (489), Expect = 3.0e-46
Identity = 98/116 (84.48%), Postives = 107/116 (92.24%), Query Frame = 1 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQET+QNT+R+ SKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETIQNTIRKGSKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 117
           ILGVTEET WEE+VKKYD LFERNA+ GSFYLQSKVHRAKE LE +++ KG+  PS
Sbjct: 61  ILGVTEETAWEEIVKKYDTLFERNAKNGSFYLQSKVHRAKECLEAVHRGKGEGTPS 116

[Close]
BLAST of MELO3C025561 vs. NCBI nr
Match: gi|659106003|ref|XP_008453226.1| (PREDICTED: mitochondrial import inner membrane translocase subunit tim16-like isoform X1 [Cucumis melo])

HSP 1 Score: 192.6 bits (488), Expect = 3.9e-46
Identity = 98/116 (84.48%), Postives = 105/116 (90.52%), Query Frame = 1 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAK+LA+LIV GS I+ RA  QAY+QAL NASKSGVAQET+QNTVRRASKVMTEQEARQ
Sbjct: 1   MAAKVLAHLIVSGSVIIGRAIAQAYQQALRNASKSGVAQETIQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 117
           ILGVTEE PWEE+VKKYD+LFERNAQTGSFYLQSKVHRAKERLETLY  K QD PS
Sbjct: 61  ILGVTEEMPWEEIVKKYDSLFERNAQTGSFYLQSKVHRAKERLETLYHSKDQDVPS 116

[Close]
BLAST of MELO3C025561 vs. NCBI nr
Match: gi|702433133|ref|XP_010069346.1| (PREDICTED: mitochondrial import inner membrane translocase subunit Tim16 [Eucalyptus grandis])

HSP 1 Score: 192.2 bits (487), Expect = 5.1e-46
Identity = 97/116 (83.62%), Postives = 107/116 (92.24%), Query Frame = 1 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMG GI+ARA VQAYRQALANASK+GVAQET+QNTVRRASK MTEQEARQ
Sbjct: 1   MAAKILANLIVMGGGIMARALVQAYRQALANASKTGVAQETLQNTVRRASKAMTEQEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 117
           ILGVTEET WE+++KKYDALFERNA+ GSFY+QSKVHRAKE LE++YQ KGQ  PS
Sbjct: 61  ILGVTEETAWEDILKKYDALFERNAKNGSFYIQSKVHRAKECLESVYQGKGQSNPS 116

The following BLAST results are available for this feature:
BLAST of MELO3C025561 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TIM16_DANRE5.2e-1445.61Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio GN=... [more]
TIM16_MOUSE1.5e-1344.35Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus GN... [more]
TIM16_HUMAN2.0e-1344.35Mitochondrial import inner membrane translocase subunit TIM16 OS=Homo sapiens GN... [more]
TI16B_XENLA1.7e-1244.35Mitochondrial import inner membrane translocase subunit tim16-B OS=Xenopus laevi... [more]
TI16A_XENLA2.8e-1242.11Mitochondrial import inner membrane translocase subunit tim16-A OS=Xenopus laevi... [more]
BLAST of MELO3C025561 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LW69_CUCSA1.6e-5498.28Uncharacterized protein OS=Cucumis sativus GN=Csa_1G185100 PE=4 SV=1[more]
A0A067LED2_JATCU2.1e-4684.48Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23812 PE=4 SV=1[more]
A0A059AV82_EUCGR3.6e-4683.62Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00433 PE=4 SV=1[more]
A0A0A0LSD2_CUCSA1.8e-4582.76Uncharacterized protein OS=Cucumis sativus GN=Csa_1G011490 PE=4 SV=1[more]
C6T494_SOYBN1.1e-4482.76Putative uncharacterized protein OS=Glycine max PE=2 SV=1[more]
BLAST of MELO3C025561 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G59280.17.3e-4373.28 Protein Transporter, Pam16[more]
AT5G61880.16.6e-3671.30 Protein Transporter, Pam16[more]
BLAST of MELO3C025561 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659127284|ref|XP_008463624.1|1.2e-55100.00PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumi... [more]
gi|449443552|ref|XP_004139541.1|2.3e-5498.28PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumi... [more]
gi|802559894|ref|XP_012066242.1|3.0e-4684.48PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Jatrop... [more]
gi|659106003|ref|XP_008453226.1|3.9e-4684.48PREDICTED: mitochondrial import inner membrane translocase subunit tim16-like is... [more]
gi|702433133|ref|XP_010069346.1|5.1e-4683.62PREDICTED: mitochondrial import inner membrane translocase subunit Tim16 [Eucaly... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005341Tim16
IPR005341Tim16
IPR005341Tim16
Vocabulary: Cellular Component
TermDefinition
GO:0005744mitochondrial inner membrane presequence translocase complex
GO:0005744mitochondrial inner membrane presequence translocase complex
GO:0005744mitochondrial inner membrane presequence translocase complex
Vocabulary: Biological Process
TermDefinition
GO:0030150protein import into mitochondrial matrix
GO:0030150protein import into mitochondrial matrix
GO:0030150protein import into mitochondrial matrix
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030150 protein import into mitochondrial matrix
cellular_component GO:0005744 mitochondrial inner membrane presequence translocase complex
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU43583melon EST collection version 4.0transcribed_cluster
MU57720melon EST collection version 4.0transcribed_cluster
MU64769melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025561T4MELO3C025561T4mRNA
MELO3C025561T3MELO3C025561T3mRNA
MELO3C025561T2MELO3C025561T2mRNA
MELO3C025561T1MELO3C025561T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU64769MU64769transcribed_cluster
MU43583MU43583transcribed_cluster
MU57720MU57720transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C025561Csa1G185100Cucumber (Chinese Long) v2cumeB029
MELO3C025561Cla009014Watermelon (97103) v1mewmB168
MELO3C025561ClCG01G010310Watermelon (Charleston Gray)mewcgB142
MELO3C025561Cla97C01G010260Watermelon (97103) v2mewmbB144
MELO3C025561CSPI01G15930Wild cucumber (PI 183967)cpimeB016
MELO3C025561Lsi02G011100Bottle gourd (USVL1VR-Ls)lsimeB181
MELO3C025561CsGy1G015570Cucumber (Gy14) v2cgybmeB014
MELO3C025561CsaV3_1G017160Cucumber (Chinese Long) v3cucmeB014
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C025561Cucurbita pepo (Zucchini)cpemeB472