MELO3C025062.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C025062.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	transcription initiation factor TFIID subunit 11-like
Location	chr09 : 15256284 .. 15257368 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTTCGAAGCTTCTTCAATTGTGTACCGGTTTTGTACCAAATTAAATGGCGGAAATTACCAATAGAGAGGAGGAGGTCGCATTTGATTAAATGGCAGAAATTACCAATAGGAAGGAGGAGGTCGCATTTGATGCGAAGCGGAAACCTGCTGATTCTTGCTTCCAACCGAAAGAGGAGAGTTCGAACAAAATTCAGAAGCTCGAAGTGGTTGAGGGTGAAGAATCCTGTAATTATGTGAAGAACAATGCCGAGAATGGTGACCATAAGGGAAGTGATGAACAGATTGATAATGTTTCTTCTACGGTTCTGGAAGGGAAGGATGACGATGGAGTTGATGGAGCTAGTTTAGATGCGGGAGATGAGGAGGAGGATTATGAGGATGAAGACGATAGTGAGGATGACGAAAAATCGAGTGGGAAAGTGGCTGCGGATCGGAAGGGGAAGGGGATTATGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGATGACGACGACGACGACGATGAGGATTCCAGTGATGATGGAAGCGACTTGGATTCTGAAGAGAGCGATTTGTCGGATGATCCACTTGCGGAGGTCGATTTGGACAACATCCTTCCTTCAAGGACGAGGAGGCGAATGGTTCACCCTGGAGTTTATTTCGCTACGGATCTGGCAAACGACGACGATGATAGCAGTGATAGCGATGCTTGAAACGTTCAAGAAGGTCAGTAAAATTCGCAATCGAACCTTGGAGTTAGTACAATTGATATGAGTTGATGTTTCTCAGTTTTATCTTCTTTAGGGATAATGCAGCAATGTAATGAGTTACTCCAACAATTTGATTTTTAAGGTTACATGTTTTCTTGTTTTCCCACTTTGATATCGGTAGCATTGAGGATTGCTTGCATCTATGGCTTTCGTTAATATGCCTTTTTCTTAGAAGTTCTTATTTGTAGGGGGATTGTACTCATCAATCTTAATTGTAAGCCAAAATTAATAGATAGCAATGGAGTTTGTAACATTTGATTCTTCACTTAACGGATATGTTAGTGATGCCAATACTCTTGCACATTGAAAAGCAGTTTCTTGAGATTTA

mRNA sequence

GGTTTCGAAGCTTCTTCAATTGTGTACCGGTTTTGTACCAAATTAAATGGCGGAAATTACCAATAGAGAGGAGGAGGTCGCATTTGATTAAATGGCAGAAATTACCAATAGGAAGGAGGAGGTCGCATTTGATGCGAAGCGGAAACCTGCTGATTCTTGCTTCCAACCGAAAGAGGAGAGTTCGAACAAAATTCAGAAGCTCGAAGTGGTTGAGGGTGAAGAATCCTGTAATTATGTGAAGAACAATGCCGAGAATGGTGACCATAAGGGAAGTGATGAACAGATTGATAATGTTTCTTCTACGGTTCTGGAAGGGAAGGATGACGATGGAGTTGATGGAGCTAGTTTAGATGCGGGAGATGAGGAGGAGGATTATGAGGATGAAGACGATAGTGAGGATGACGAAAAATCGAGTGGGAAAGTGGCTGCGGATCGGAAGGGGAAGGGGATTATGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGATGACGACGACGACGACGATGAGGATTCCAGTGATGATGGAAGCGACTTGGATTCTGAAGAGAGCGATTTGTCGGATGATCCACTTGCGGAGGTCGATTTGGACAACATCCTTCCTTCAAGGACGAGGAGGCGAATGGTTCACCCTGGAGTTTATTTCGCTACGGATCTGGCAAACGACGACGATGATAGCAGTGATAGCGATGCTTGAAACGTTCAAGAAGGTCAGTAAAATTCGCAATCGAACCTTGGAGTTAGTACAATTGATATGAGTTGATGTTTCTCAGTTTTATCTTCTTTAGGGATAATGCAGCAATGTAATGAGTTACTCCAACAATTTGATTTTTAAGGTTACATGTTTTCTTGTTTTCCCACTTTGATATCGGTAGCATTGAGGATTGCTTGCATCTATGGCTTTCGTTAATATGCCTTTTTCTTAGAAGTTCTTATTTGTAGGGGGATTGTACTCATCAATCTTAATTGTAAGCCAAAATTAATAGATAGCAATGGAGTTTGTAACATTTGATTCTTCACTTAACGGATATGTTAGTGATGCCAATACTCTTGCACATTGAAAAGCAGTTTCTTGAGATTTA

Coding sequence (CDS)

ATGGCAGAAATTACCAATAGGAAGGAGGAGGTCGCATTTGATGCGAAGCGGAAACCTGCTGATTCTTGCTTCCAACCGAAAGAGGAGAGTTCGAACAAAATTCAGAAGCTCGAAGTGGTTGAGGGTGAAGAATCCTGTAATTATGTGAAGAACAATGCCGAGAATGGTGACCATAAGGGAAGTGATGAACAGATTGATAATGTTTCTTCTACGGTTCTGGAAGGGAAGGATGACGATGGAGTTGATGGAGCTAGTTTAGATGCGGGAGATGAGGAGGAGGATTATGAGGATGAAGACGATAGTGAGGATGACGAAAAATCGAGTGGGAAAGTGGCTGCGGATCGGAAGGGGAAGGGGATTATGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGATGACGACGACGACGACGATGAGGATTCCAGTGATGATGGAAGCGACTTGGATTCTGAAGAGAGCGATTTGTCGGATGATCCACTTGCGGAGGTCGATTTGGACAACATCCTTCCTTCAAGGACGAGGAGGCGAATGGTTCACCCTGGAGTTTATTTCGCTACGGATCTGGCAAACGACGACGATGATAGCAGTGATAGCGATGCTTGA

Protein sequence

MAEITNRKEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNNAENGDHKGSDEQIDNVSSTVLEGKDDDGVDGASLDAGDEEEDYEDEDDSEDDEKSSGKVAADRKGKGIMKDDKGKGKLIEEDDDDDDDEDSSDDGSDLDSEESDLSDDPLAEVDLDNILPSRTRRRMVHPGVYFATDLANDDDDSSDSDA

Homology

[Close]

BLAST of MELO3C025062.2 vs. NCBI nr
Match: XP_008463121.1 (PREDICTED: acidic repeat-containing protein [Cucumis melo])

HSP 1 Score: 272.3 bits (695), Expect = 1.3e-69
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MAEITNRKEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNNAENGDHKG 60
           MAEITNRKEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNNAENGDHKG
Sbjct: 1   MAEITNRKEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNNAENGDHKG 60

Query: 61  SDEQIDNVSSTVLEGKDDDGVDGASLDAGXXXXXXXXXXXXXXXXXXXXXXXXDRKGKGI 120
           SDEQIDNVSSTVLEGKDDDGVDGASLDAGXXXXXXXXXXXXXXXXXXXXXXXXDRKGKGI
Sbjct: 61  SDEQIDNVSSTVLEGKDDDGVDGASLDAGXXXXXXXXXXXXXXXXXXXXXXXXDRKGKGI 120

Query: 121 MKXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRMV 180
           MKXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRMV
Sbjct: 121 MKXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRMV 180

Query: 181 HPGVYFATDLANDDDDSSDSDA 203
           HPGVYFATDLANDDDDSSDSDA
Sbjct: 181 HPGVYFATDLANDDDDSSDSDA 202

[Close]

BLAST of MELO3C025062.2 vs. NCBI nr
Match: XP_004150738.1 (PREDICTED: nucleolin [Cucumis sativus] >KGN50883.1 hypothetical protein Csa_5G312330 [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 7.4e-57
Identity = 182/202 (90.10%), Postives = 185/202 (91.58%), Query Frame = 0


Query: 1   MAEITNRKEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNNAENGDHKG 60
           MAEITNR+EEVAFDAKRKP DSCFQPKEE SNKIQKLEVVEGEESCNYV NNAENGDHKG
Sbjct: 1   MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKG 60

Query: 61  SDEQIDNVSSTVLEGKDDDGVDGASLDAGXXXXXXXXXXXXXXXXXXXXXXXXDRKGKGI 120
           SDEQ+DN+SSTVLEGK DDGVDGASLDA  XXXXXXXXXXXXXXXXXXXXXXX       
Sbjct: 61  SDEQVDNISSTVLEGKGDDGVDGASLDA--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 MKXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRMV 180
             XXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRR V
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRTV 180

Query: 181 HPGVYFATDLANDDDDSSDSDA 203
           HPGVYFATDL NDDDDSSDSDA
Sbjct: 181 HPGVYFATDLGNDDDDSSDSDA 200

[Close]

BLAST of MELO3C025062.2 vs. NCBI nr
Match: XP_008441603.1 (PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo] >XP_008441604.1 PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo] >XP_008441605.1 PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo] >XP_008441606.1 PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo] >XP_016899453.1 PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo] >XP_016899454.1 PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo])

HSP 1 Score: 224.6 bits (571), Expect = 3.1e-55
Identity = 174/202 (86.14%), Postives = 179/202 (88.61%), Query Frame = 0


Query: 1   MAEITNRKEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNNAENGDHKG 60
           MAEITNR+EEVAFD KRKP DSCFQPK+E SNKIQKLEVV GEESC+YVKNNAENGDHKG
Sbjct: 1   MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKG 60

Query: 61  SDEQIDNVSSTVLEGKDDDGVDGASLDAGXXXXXXXXXXXXXXXXXXXXXXXXDRKGKGI 120
           SDE+IDNVSSTVLEGKDDDGVDGASLDA  XXXXXXXXXXXXXXXXXXX    DRKGKGI
Sbjct: 61  SDEEIDNVSSTVLEGKDDDGVDGASLDARDXXXXXXXXXXXXXXXXXXXKVAADRKGKGI 120

Query: 121 MKXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRMV 180
           M  XXXXXXXXXXXXXXXXXXXXXXXXXX         DDPLAEVDLDNILPSRTRRR V
Sbjct: 121 M--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDPLAEVDLDNILPSRTRRRTV 180

Query: 181 HPGVYFATDLANDDDDSSDSDA 203
           HPGVY+ TDLANDDDDSSDSDA
Sbjct: 181 HPGVYYVTDLANDDDDSSDSDA 200

[Close]

BLAST of MELO3C025062.2 vs. NCBI nr
Match: XP_022992871.1 (nucleolin-like [Cucurbita maxima] >XP_022992872.1 nucleolin-like [Cucurbita maxima] >XP_022992873.1 nucleolin-like [Cucurbita maxima])

HSP 1 Score: 180.6 bits (457), Expect = 5.2e-42
Identity = 133/203 (65.52%), Postives = 141/203 (69.46%), Query Frame = 0


Query: 1   MAEITNRKEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNNAENGDHKG 60
           MAE  + +EE AFDAKRKPAD C + KEE SNKIQKLEVVEG E CN VK N +NGDHK 
Sbjct: 1   MAETASSREETAFDAKRKPADPCCEAKEERSNKIQKLEVVEG-EPCNDVKKNGDNGDHKQ 60

Query: 61  SDEQIDNVSSTVLEGKDDDGVDGASLDAGXXXXXXXXXXXXXXXXXXXXXXXXDRKGKGI 120
            DEQID++SS   EGK DDGV  A +DAG                        DRKGKGI
Sbjct: 61  GDEQIDSISSAA-EGK-DDGVFAADVDAGNEGEDYNDEDDCENGEKSSGKAAKDRKGKGI 120

Query: 121 MK-XXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRM 180
           MK         XXXXXXXXXXXXXXXXXXX     SDLSDDPLAEVDLDNILPSRTRRR 
Sbjct: 121 MKDDKGKGKLIXXXXXXXXXXXXXXXXXXXXXXXXSDLSDDPLAEVDLDNILPSRTRRRT 180

Query: 181 VHPGVYFATDLANDDDDSSDSDA 203
           VHPGVYFATDL N+DDDSSDSDA
Sbjct: 181 VHPGVYFATDLGNEDDDSSDSDA 200

[Close]

BLAST of MELO3C025062.2 vs. NCBI nr
Match: XP_022939215.1 (prostatic spermine-binding protein isoform X2 [Cucurbita moschata] >XP_022939216.1 prostatic spermine-binding protein isoform X2 [Cucurbita moschata] >XP_022939218.1 prostatic spermine-binding protein isoform X2 [Cucurbita moschata] >XP_022939219.1 prostatic spermine-binding protein isoform X2 [Cucurbita moschata] >XP_022939220.1 prostatic spermine-binding protein isoform X2 [Cucurbita moschata])

HSP 1 Score: 156.8 bits (395), Expect = 8.0e-35
Identity = 152/203 (74.88%), Postives = 160/203 (78.82%), Query Frame = 0


Query: 1   MAEITNRKEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNNAENGDHKG 60
           MAE  + +EE AFDAKRKPAD C + KEE SNKIQKLEVVEG E CN VK N +NGDHK 
Sbjct: 1   MAETASSREETAFDAKRKPADPCCEAKEERSNKIQKLEVVEG-EPCNDVKKNGDNGDHKQ 60

Query: 61  SDEQIDNVSSTVLEGKDDDGVDGASLDA-GXXXXXXXXXXXXXXXXXXXXXXXXDRKGKG 120
            D+QIDN+SS   EGK DDGV  A +DA  XXXXXXXXXXXXXXXXXXXXXXXX      
Sbjct: 61  GDDQIDNISSAA-EGK-DDGVLAADVDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 IMKXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRM 180
              XXXXXX   XXXXXXXXXXXXXXXXXX     SDLSDDPLAEVDLDNILPSRTRRR 
Sbjct: 121 XXXXXXXXXKLIXXXXXXXXXXXXXXXXXXXXXXXSDLSDDPLAEVDLDNILPSRTRRRT 180

Query: 181 VHPGVYFATDLANDDDDSSDSDA 203
           VHPGVYFATDL N+DDDSSDSDA
Sbjct: 181 VHPGVYFATDLGNEDDDSSDSDA 200

[Close]

BLAST of MELO3C025062.2 vs. TAIR10
Match: AT1G12830.1 (unknown protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.9e-06
Identity = 110/221 (49.77%), Postives = 137/221 (61.99%), Query Frame = 0


Query: 1   MAEITNRKEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNNAENGDHKG 60
           MA++ N+++  +F  KRK +D   Q ++  +NK QKL       S N   + +++G+  G
Sbjct: 1   MADVENQQDS-SFPVKRK-SDLFCQDQDNVTNKAQKL-----NPSLNSADSESKDGETNG 60

Query: 61  SDEQIDNVS----------STVLEGKDDDGVD-GASLDAG-XXXXXXXXXXXXXXXXXXX 120
           S  QI+N++          S+VL  K  + V+ G   D G XXXXXXXXXXXXXXXXXXX
Sbjct: 61  SG-QIENLNSSTEETIGAESSVLSEKAAEEVESGVIGDVGXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXDRKGKGIMK--XXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVD 180
           XXXXX RKGKGI +         XXXXXXXXXXXXXXXXXXXX           PLAEVD
Sbjct: 121 XXXXXXRKGKGISREDKGKGKMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLAEVD 180

Query: 181 LDNILPSRTRRRMVHPGVYFATDLAN-----DDDDSSDSDA 203
           LDNILPSRTRRR   PGV+   + +N     +DD+SSDSDA
Sbjct: 181 LDNILPSRTRRRSSQPGVFIPNEFSNRHVNDEDDESSDSDA 213

[Close]

BLAST of MELO3C025062.2 vs. TrEMBL
Match: tr|A0A1S3CIW7|A0A1S3CIW7_CUCME (acidic repeat-containing protein OS=Cucumis melo OX=3656 GN=LOC103501347 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 8.6e-70
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MAEITNRKEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNNAENGDHKG 60
           MAEITNRKEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNNAENGDHKG
Sbjct: 1   MAEITNRKEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNNAENGDHKG 60

Query: 61  SDEQIDNVSSTVLEGKDDDGVDGASLDAGXXXXXXXXXXXXXXXXXXXXXXXXDRKGKGI 120
           SDEQIDNVSSTVLEGKDDDGVDGASLDAGXXXXXXXXXXXXXXXXXXXXXXXXDRKGKGI
Sbjct: 61  SDEQIDNVSSTVLEGKDDDGVDGASLDAGXXXXXXXXXXXXXXXXXXXXXXXXDRKGKGI 120

Query: 121 MKXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRMV 180
           MKXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRMV
Sbjct: 121 MKXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRMV 180

Query: 181 HPGVYFATDLANDDDDSSDSDA 203
           HPGVYFATDLANDDDDSSDSDA
Sbjct: 181 HPGVYFATDLANDDDDSSDSDA 202

[Close]

BLAST of MELO3C025062.2 vs. TrEMBL
Match: tr|A0A0A0KMR8|A0A0A0KMR8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G312330 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 4.9e-57
Identity = 182/202 (90.10%), Postives = 185/202 (91.58%), Query Frame = 0


Query: 1   MAEITNRKEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNNAENGDHKG 60
           MAEITNR+EEVAFDAKRKP DSCFQPKEE SNKIQKLEVVEGEESCNYV NNAENGDHKG
Sbjct: 1   MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKG 60

Query: 61  SDEQIDNVSSTVLEGKDDDGVDGASLDAGXXXXXXXXXXXXXXXXXXXXXXXXDRKGKGI 120
           SDEQ+DN+SSTVLEGK DDGVDGASLDA  XXXXXXXXXXXXXXXXXXXXXXX       
Sbjct: 61  SDEQVDNISSTVLEGKGDDGVDGASLDA--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 MKXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRMV 180
             XXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRR V
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRTV 180

Query: 181 HPGVYFATDLANDDDDSSDSDA 203
           HPGVYFATDL NDDDDSSDSDA
Sbjct: 181 HPGVYFATDLGNDDDDSSDSDA 200

[Close]

BLAST of MELO3C025062.2 vs. TrEMBL
Match: tr|A0A1S3B3S7|A0A1S3B3S7_CUCME (transcription initiation factor TFIID subunit 11-like OS=Cucumis melo OX=3656 GN=LOC103485687 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.1e-55
Identity = 174/202 (86.14%), Postives = 179/202 (88.61%), Query Frame = 0


Query: 1   MAEITNRKEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNNAENGDHKG 60
           MAEITNR+EEVAFD KRKP DSCFQPK+E SNKIQKLEVV GEESC+YVKNNAENGDHKG
Sbjct: 1   MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKG 60

Query: 61  SDEQIDNVSSTVLEGKDDDGVDGASLDAGXXXXXXXXXXXXXXXXXXXXXXXXDRKGKGI 120
           SDE+IDNVSSTVLEGKDDDGVDGASLDA  XXXXXXXXXXXXXXXXXXX    DRKGKGI
Sbjct: 61  SDEEIDNVSSTVLEGKDDDGVDGASLDARDXXXXXXXXXXXXXXXXXXXKVAADRKGKGI 120

Query: 121 MKXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRMV 180
           M  XXXXXXXXXXXXXXXXXXXXXXXXXX         DDPLAEVDLDNILPSRTRRR V
Sbjct: 121 M--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDPLAEVDLDNILPSRTRRRTV 180

Query: 181 HPGVYFATDLANDDDDSSDSDA 203
           HPGVY+ TDLANDDDDSSDSDA
Sbjct: 181 HPGVYYVTDLANDDDDSSDSDA 200

[Close]

BLAST of MELO3C025062.2 vs. TrEMBL
Match: tr|A0A2I4HF99|A0A2I4HF99_9ROSI (pheromone-processing carboxypeptidase KEX1-like OS=Juglans regia OX=51240 GN=LOC109016937 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.8e-12
Identity = 39/53 (73.58%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 150 LDSEESDLSDDPLAEVDLDNILPSRTRRRMVHPGVYFATDLANDDDDSSDSDA 203
           + + ESDLSDDPLAEVDLDNILPSRTR+R + PGVY A+DL N+DDDS  SDA
Sbjct: 142 ISNGESDLSDDPLAEVDLDNILPSRTRKRTIQPGVYIASDLGNNDDDSDGSDA 194

[Close]

BLAST of MELO3C025062.2 vs. TrEMBL
Match: tr|A0A2I4FTB4|A0A2I4FTB4_9ROSI (nucleolin-like OS=Juglans regia OX=51240 GN=LOC109001861 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.8e-12
Identity = 39/53 (73.58%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 150 LDSEESDLSDDPLAEVDLDNILPSRTRRRMVHPGVYFATDLANDDDDSSDSDA 203
           + + ESDLSDDPLAEVDLDNILPSRTR+R + PGVY A+DL N+DDDS  SDA
Sbjct: 146 ISNGESDLSDDPLAEVDLDNILPSRTRKRTIQPGVYIASDLGNNDDDSDGSDA 198

The following BLAST results are available for this feature:

BLAST of MELO3C025062.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463121.1	1.3e-69	100.00	PREDICTED: acidic repeat-containing protein [Cucumis melo]	[more]
XP_004150738.1	7.4e-57	90.10	PREDICTED: nucleolin [Cucumis sativus] >KGN50883.1 hypothetical protein Csa_5G31...	[more]
XP_008441603.1	3.1e-55	86.14	PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo] ...	[more]
XP_022992871.1	5.2e-42	65.52	nucleolin-like [Cucurbita maxima] >XP_022992872.1 nucleolin-like [Cucurbita maxi...	[more]
XP_022939215.1	8.0e-35	74.88	prostatic spermine-binding protein isoform X2 [Cucurbita moschata] >XP_022939216...	[more]

BLAST of MELO3C025062.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G12830.1	1.9e-06	49.77	unknown protein	[more]

BLAST of MELO3C025062.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C025062.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CIW7\|A0A1S3CIW7_CUCME	8.6e-70	100.00	acidic repeat-containing protein OS=Cucumis melo OX=3656 GN=LOC103501347 PE=4 SV...	[more]
tr\|A0A0A0KMR8\|A0A0A0KMR8_CUCSA	4.9e-57	90.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G312330 PE=4 SV=1	[more]
tr\|A0A1S3B3S7\|A0A1S3B3S7_CUCME	2.1e-55	86.14	transcription initiation factor TFIID subunit 11-like OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A2I4HF99\|A0A2I4HF99_9ROSI	2.8e-12	73.58	pheromone-processing carboxypeptidase KEX1-like OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2I4FTB4\|A0A2I4FTB4_9ROSI	2.8e-12	73.58	nucleolin-like OS=Juglans regia OX=51240 GN=LOC109001861 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
biological_process	GO:0010373	negative regulation of gibberellin biosynthetic process
biological_process	GO:0008150	biological_process
biological_process	GO:0010262	somatic embryogenesis
biological_process	GO:0009560	embryo sac egg cell differentiation
biological_process	GO:1902600	hydrogen ion transmembrane transport
biological_process	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c
biological_process	GO:0006626	protein targeting to mitochondrion
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008284	positive regulation of cell proliferation
biological_process	GO:0010116	positive regulation of abscisic acid biosynthetic process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0045275	respiratory chain complex III
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008121	ubiquinol-cytochrome-c reductase activity
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025062.2.1	MELO3C025062.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..163
None	No IPR available	PANTHER	PTHR36899	FAMILY NOT NAMED	coord: 1..202

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C025062.2	Csa5G312330	Cucumber (Chinese Long) v2	cumedB344
MELO3C025062.2	CSPI05G13540	Wild cucumber (PI 183967)	cpimedB335
MELO3C025062.2	CmaCh15G007800	Cucurbita maxima (Rimu)	cmamedB286
MELO3C025062.2	CmoCh04G023560	Cucurbita moschata (Rifu)	cmomedB714
MELO3C025062.2	CmoCh15G008090	Cucurbita moschata (Rifu)	cmomedB272
MELO3C025062.2	Lsi09G008710	Bottle gourd (USVL1VR-Ls)	lsimedB014
MELO3C025062.2	Cp4.1LG13g05640	Cucurbita pepo (Zucchini)	cpemedB184
MELO3C025062.2	Cla009099	Watermelon (97103) v1	medwmB031
MELO3C025062.2	ClCG01G008240	Watermelon (Charleston Gray)	medwcgB018
MELO3C025062.2	Cla97C01G008590	Watermelon (97103) v2	medwmbB008
MELO3C025062.2	Bhi12G001024	Wax gourd	medwgoB015
MELO3C025062.2	Carg18306	Silver-seed gourd	carmedB0537
MELO3C025062.2	Carg01423	Silver-seed gourd	carmedB0832
MELO3C025062.2	CsaV3_5G020150	Cucumber (Chinese Long) v3	cucmedB355

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C025062.2	Cucumber (Gy14) v2	cgybmedB295
MELO3C025062.2	Cucumber (Gy14) v2	cgybmedB304
MELO3C025062.2	Cucurbita maxima (Rimu)	cmamedB721
MELO3C025062.2	Cucurbita pepo (Zucchini)	cpemedB419
MELO3C025062.2	Wild cucumber (PI 183967)	cpimedB346
MELO3C025062.2	Cucumber (Chinese Long) v2	cumedB332
MELO3C025062.2	Cucumber (Chinese Long) v3	cucmedB344