CmoCh04G023560 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G023560
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	BnaCnng51290D protein
Location	Cmo_Chr04 : 17571414 .. 17571998 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAACTACTAACACAGAGGAGTCCGTATTTGATGCGAAGCGCAAAGTTGATACCTGCTCTGAAGAGAAACAGGAGCGTTCGAACAAAATTCAGAAGCTCGAAGTGGTTGAGGGCGATTCCTGCAATGCTGTGAAGAATGGTGTGAGTGGTGGAGGGATTGATGGCGATTCTTTGGTTGAGGGAGGGAAAGATGGTGGAGTTTGTGTGGATGTGGGAGAAGCAGAAGATGAAGATTATGAGGAGGTGGACAGCGACGAGGATGAGGAGGAAGATGGCAGCGACGATGGTGGAAAGTTGAGTGGGAAAGTGGATGAGGATCGTAAGGGGAAGGGTATCATGAAGGACGACAAAGGAAAAGGGAAATTTATTGAGGAGGAGGAAGACGACGACGACGACGACGACGACGATGGAAGTGAGTTAGGCTCTGAAGAGAGCGATTTGTCGGATGATCCGCTTACGGAGGTCGATTTGGACAACATACTTCCTTCAAGAACGCGAAGGCGGACTGTTCATCCTGGAGTTTATTTTGCTACGGATCTGGGGAACGACAACGATGATAGCAGCGATAGCGATGCTTGA

mRNA sequence

ATGGCGGAAACTACTAACACAGAGGAGTCCGTATTTGATGCGAAGCGCAAAGTTGATACCTGCTCTGAAGAGAAACAGGAGCGTTCGAACAAAATTCAGAAGCTCGAAGTGGTTGAGGGCGATTCCTGCAATGCTGTGAAGAATGGTGTGAGTGGTGGAGGGATTGATGGCGATTCTTTGGTTGAGGGAGGGAAAGATGGTGGAGTTTGTGTGGATGTGGGAGAAGCAGAAGATGAAGATTATGAGGAGGTGGACAGCGACGAGGATGAGGAGGAAGATGGCAGCGACGATGGTGGAAAGTTGAGTGGGAAAGTGGATGAGGATCGTAAGGGGAAGGGTATCATGAAGGACGACAAAGGAAAAGGGAAATTTATTGAGGAGGAGGAAGACGACGACGACGACGACGACGACGATGGAAGTGAGTTAGGCTCTGAAGAGAGCGATTTGTCGGATGATCCGCTTACGGAGGTCGATTTGGACAACATACTTCCTTCAAGAACGCGAAGGCGGACTGTTCATCCTGGAGTTTATTTTGCTACGGATCTGGGGAACGACAACGATGATAGCAGCGATAGCGATGCTTGA

Coding sequence (CDS)

ATGGCGGAAACTACTAACACAGAGGAGTCCGTATTTGATGCGAAGCGCAAAGTTGATACCTGCTCTGAAGAGAAACAGGAGCGTTCGAACAAAATTCAGAAGCTCGAAGTGGTTGAGGGCGATTCCTGCAATGCTGTGAAGAATGGTGTGAGTGGTGGAGGGATTGATGGCGATTCTTTGGTTGAGGGAGGGAAAGATGGTGGAGTTTGTGTGGATGTGGGAGAAGCAGAAGATGAAGATTATGAGGAGGTGGACAGCGACGAGGATGAGGAGGAAGATGGCAGCGACGATGGTGGAAAGTTGAGTGGGAAAGTGGATGAGGATCGTAAGGGGAAGGGTATCATGAAGGACGACAAAGGAAAAGGGAAATTTATTGAGGAGGAGGAAGACGACGACGACGACGACGACGACGATGGAAGTGAGTTAGGCTCTGAAGAGAGCGATTTGTCGGATGATCCGCTTACGGAGGTCGATTTGGACAACATACTTCCTTCAAGAACGCGAAGGCGGACTGTTCATCCTGGAGTTTATTTTGCTACGGATCTGGGGAACGACAACGATGATAGCAGCGATAGCGATGCTTGA

Homology

[Close]

BLAST of CmoCh04G023560 vs. TrEMBL
Match: A0A0A0KMR8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G312330 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 9.7e-49
Identity = 137/209 (65.55%), Postives = 154/209 (73.68%), Query Frame = 1


Query: 1   MAETTNTEESV-FDAKRK-VDTCSEEKQERSNKIQKLEVVEGD-SCNAVKNGVSGGGIDG 60
           MAE TN EE V FDAKRK  D+C + K+ERSNKIQKLEVVEG+ SCN V N    G   G
Sbjct: 1   MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKG 60

Query: 61  D---------SLVEG-GKDG--GVCVDVGEAEDEDYEEVDSDEDEEEDGSDDGGKLSGKV 120
                     +++EG G DG  G  +D G+ E+EDYE+ D  ED+E        K S KV
Sbjct: 61  SDEQVDNISSTVLEGKGDDGVDGASLDAGD-EEEDYEDEDDSEDDE--------KSSAKV 120

Query: 121 DEDRKGKGIMKDDKGKGKFIEEEEDDDDDDDDDGSELGSEESDLSDDPLTEVDLDNILPS 180
            EDRKGKGIMKDDKGKGK IEE++DDD+D  DDGS+L SEESDLSDDPL EVDLDNILPS
Sbjct: 121 AEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPS 180

Query: 181 RTRRRTVHPGVYFATDLGNDNDDSSDSDA 195
           RTRRRTVHPGVYFATDLGND+DDSSDSDA
Sbjct: 181 RTRRRTVHPGVYFATDLGNDDDDSSDSDA 200

[Close]

BLAST of CmoCh04G023560 vs. TrEMBL
Match: M5WTN0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011904mg PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.0e-26
Identity = 100/195 (51.28%), Postives = 119/195 (61.03%), Query Frame = 1


Query: 1   MAETTNTEESVFDAKRKVDTCSEEKQERSNKIQKLEVVEGDSCNAVKNGVSGGGIDGDSL 60
           MAET N  E  F  KRK D   E++ +   K  KLEV +  S  A      G   D ++ 
Sbjct: 1   MAETNNLGEPTFPVKRKPDLSCEDQADYPKKTHKLEVSDISSSLA-----EGKTQDPENF 60

Query: 61  VEGGKDGGVCVDVGEAEDEDYEEVDSDEDEEEDGSDDGGKLSGKVDEDRKGKGIMKDDKG 120
            +         D  EA  +  +E D  ED++ED  +DG K +GK + DRKGKGIM+DDKG
Sbjct: 61  DQNSSVAEEINDKFEANADPEDEEDFVEDDDED--EDGEKSNGKAEVDRKGKGIMRDDKG 120

Query: 121 KGKFIEEEEDDDDDDDDDG-SELGSEESDLSDDPLTEVDLDNILPSRTRRRTVHPGVYFA 180
           KGK IEE++DD DDD  DG SE    +SDLSDDPL EVDL NILPSRTRRR V PGVY A
Sbjct: 121 KGKLIEEDDDDSDDDSSDGGSEFEDGDSDLSDDPLAEVDLHNILPSRTRRRQVQPGVYMA 180

Query: 181 TDLGND-NDDSSDSD 194
            D+GND  DDS DSD
Sbjct: 181 NDIGNDEEDDSDDSD 188

[Close]

BLAST of CmoCh04G023560 vs. TrEMBL
Match: A0A078GJC1_BRANA (BnaA09g46820D protein OS=Brassica napus GN=BnaA09g46820D PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 9.8e-25
Identity = 99/202 (49.01%), Postives = 123/202 (60.89%), Query Frame = 1


Query: 1   MAETTNTEESVFDAKRKVDTCSEEKQERSNKIQKLEVVEGDSCNAVKNGVSGGGIDGDSL 60
           MA+  N ++S F AKRK D C +E+   +NK QKL      + +  KN     G+ GD  
Sbjct: 1   MADVENQQDSSFPAKRKSDLCCQEQDNAANKAQKLNPSSSSADSESKNE---NGVPGDRT 60

Query: 61  VEGGKDGGVCVDVGEAEDEDYEEVDSDEDEEEDGSDDGGKLSGKVDEDRKGKGIMKDDKG 120
            E  ++ GV    G+ E+ED       EDEE+D        S +V+ DRKGKGI ++DKG
Sbjct: 61  DEEKQEDGV----GDEEEED-------EDEEDD--------SIEVEIDRKGKGISREDKG 120

Query: 121 KGKFIE-EEEDDDDDDDDDGSELGSE--ESDLSDDPLTEVDLDNILPSRTRRRTVHPGVY 180
           KGK IE +E DD DDDDDD  E G E  ESDLSDDPL EVDLDNILPSRTRRR++ PGVY
Sbjct: 121 KGKLIEVDESDDSDDDDDDDDEDGDEYDESDLSDDPLAEVDLDNILPSRTRRRSIQPGVY 180

Query: 181 FATDLG-----NDNDDSSDSDA 195
            + D       +D+D S DSDA
Sbjct: 181 ISNDRSGNHEDDDDDSSDDSDA 180

[Close]

BLAST of CmoCh04G023560 vs. TrEMBL
Match: A0A0D3DPE0_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 9.8e-25
Identity = 94/201 (46.77%), Postives = 125/201 (62.19%), Query Frame = 1


Query: 1   MAETTNTEESVFDAKRKVDTCSEEKQERSNKIQKLEVVEGDSCNAVKNG-VSGGGIDGDS 60
           MA+  N +ES F  KRK D CS+++   ++K QKL      + +  K+G V+G G++   
Sbjct: 1   MADVENQQESSFPVKRKSDPCSQDEDNVASKAQKLNPSSSSAGSESKDGEVNGSGVENI- 60

Query: 61  LVEGGKDGGVCVDVGEAEDEDYEEVDSDEDEEEDGSDDGGKLSGKVDEDRKGKGIMKDDK 120
                   GV  D+ + E ++  + + +E EE++  DDG       + DRKGKGI ++DK
Sbjct: 61  --------GVPDDLADEEKKEGGDGEEEEQEEDEDDDDG-------EVDRKGKGISREDK 120

Query: 121 GKGKFIEEEEDDDDDDDDDGSELGSE--ESDLSDDPLTEVDLDNILPSRTRRRTVHPGVY 180
           GKGK IE EE DD DDDD+  E G E  ESDLSDDPL EVDLDNILPSRTRRR++ PGVY
Sbjct: 121 GKGKMIEVEESDDTDDDDEDDEDGDEYDESDLSDDPLAEVDLDNILPSRTRRRSIQPGVY 180

Query: 181 FATDLG----NDNDDSSDSDA 195
            + D G    +D+D S DSDA
Sbjct: 181 ISNDRGGANEDDDDSSDDSDA 185

[Close]

BLAST of CmoCh04G023560 vs. TrEMBL
Match: A0A0D3DU48_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.7e-24
Identity = 96/200 (48.00%), Postives = 124/200 (62.00%), Query Frame = 1


Query: 1   MAETTNTEESVFDAKRKVDTCSEEKQERSNKIQKLEVVEGDSCNAVKNGVSGGGIDGDSL 60
           MA+  N ++S F AKRK D C +E+   +NK QKL      S ++ ++GV    I  +S 
Sbjct: 1   MADVENQQDSSFPAKRKSDLCCQEQDNVANKAQKLNPSSSSSADS-ESGVENLKIGTESS 60

Query: 61  VEGGKDGGVCVDVGEAEDEDYEEVDSDEDEEEDGSDDGGKLSGKVDEDRKGKGIMKDDKG 120
           +   KD     D   AE++  + V  +++EEED        S +V+ DRKGKGI ++DKG
Sbjct: 61  ISLEKDENGVPDDHTAEEKQGDGVGYEDEEEED--------SIEVEIDRKGKGISREDKG 120

Query: 121 KGKFIEEEEDDDDDDDDDGSELGSE--ESDLSDDPLTEVDLDNILPSRTRRRTVHPGVYF 180
           KGK IE +E DD DDDDD  E G E  ESDLSDDPL EVDLDNILPSRTRRR++ PGVY 
Sbjct: 121 KGKLIEVDESDDSDDDDDDDEDGDEYDESDLSDDPLAEVDLDNILPSRTRRRSIQPGVYI 180

Query: 181 ATDLG----NDNDDSSDSDA 195
           + D      +D+D S DSDA
Sbjct: 181 SNDRSGNHEDDDDSSDDSDA 191

[Close]

BLAST of CmoCh04G023560 vs. TAIR10
Match: AT1G12830.1 (AT1G12830.1 unknown protein)

HSP 1 Score: 103.2 bits (256), Expect = 1.8e-22
Identity = 92/221 (41.63%), Postives = 125/221 (56.56%), Query Frame = 1


Query: 1   MAETTNTEESVFDAKRKVDTCSEEKQERSNKIQKLEVVEGDSCNAVKNGVSGGG------ 60
           MA+  N ++S F  KRK D   +++   +NK QKL      + +  K+G + G       
Sbjct: 1   MADVENQQDSSFPVKRKSDLFCQDQDNVTNKAQKLNPSLNSADSESKDGETNGSGQIENL 60

Query: 61  -------IDGDSLVEGGK-----DGGVCVDVGEAEDEDYEEVDSDEDEEEDGSDDGGKLS 120
                  I  +S V   K     + GV  DVG  E+++ EE + ++DEEE+  ++     
Sbjct: 61  NSSTEETIGAESSVLSEKAAEEVESGVIGDVGAEEEQEDEEDEEEDDEEEEEEEEV---- 120

Query: 121 GKVDEDRKGKGIMKDDKGKGKFIE-EEEDDDDDDDDDGSELG---SEESDLSDDPLTEVD 180
                DRKGKGI ++DKGKGK IE EE DD+DD DDD  + G    +ESD SDDPL EVD
Sbjct: 121 ----VDRKGKGISREDKGKGKMIEVEESDDEDDSDDDEDDEGFDEDDESDFSDDPLAEVD 180

Query: 181 LDNILPSRTRRRTVHPGVYFATDLGN-----DNDDSSDSDA 195
           LDNILPSRTRRR+  PGV+   +  N     ++D+SSDSDA
Sbjct: 181 LDNILPSRTRRRSSQPGVFIPNEFSNRHVNDEDDESSDSDA 213

[Close]

BLAST of CmoCh04G023560 vs. NCBI nr
Match: gi|449466046|ref|XP_004150738.1| (PREDICTED: nucleolin [Cucumis sativus])

HSP 1 Score: 201.4 bits (511), Expect = 1.4e-48
Identity = 137/209 (65.55%), Postives = 154/209 (73.68%), Query Frame = 1


Query: 1   MAETTNTEESV-FDAKRK-VDTCSEEKQERSNKIQKLEVVEGD-SCNAVKNGVSGGGIDG 60
           MAE TN EE V FDAKRK  D+C + K+ERSNKIQKLEVVEG+ SCN V N    G   G
Sbjct: 1   MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKG 60

Query: 61  D---------SLVEG-GKDG--GVCVDVGEAEDEDYEEVDSDEDEEEDGSDDGGKLSGKV 120
                     +++EG G DG  G  +D G+ E+EDYE+ D  ED+E        K S KV
Sbjct: 61  SDEQVDNISSTVLEGKGDDGVDGASLDAGD-EEEDYEDEDDSEDDE--------KSSAKV 120

Query: 121 DEDRKGKGIMKDDKGKGKFIEEEEDDDDDDDDDGSELGSEESDLSDDPLTEVDLDNILPS 180
            EDRKGKGIMKDDKGKGK IEE++DDD+D  DDGS+L SEESDLSDDPL EVDLDNILPS
Sbjct: 121 AEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSQLDSEESDLSDDPLAEVDLDNILPS 180

Query: 181 RTRRRTVHPGVYFATDLGNDNDDSSDSDA 195
           RTRRRTVHPGVYFATDLGND+DDSSDSDA
Sbjct: 181 RTRRRTVHPGVYFATDLGNDDDDSSDSDA 200

[Close]

BLAST of CmoCh04G023560 vs. NCBI nr
Match: gi|659126321|ref|XP_008463122.1| (PREDICTED: histone H2A.Z-specific chaperone CHZ1 isoform X2 [Cucumis melo])

HSP 1 Score: 196.1 bits (497), Expect = 5.9e-47
Identity = 136/211 (64.45%), Postives = 153/211 (72.51%), Query Frame = 1


Query: 1   MAETTNTEESV-FDAKRK-VDTCSEEKQERSNKIQKLEVVEGD-SCNAVKNGVSGGGIDG 60
           MAE TN EE V FDAKRK  D+C + K+E SNKIQKLEVVEG+ SCN VKN    G   G
Sbjct: 1   MAEITNREEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNNAENGDHKG 60

Query: 61  D---------SLVEGGKDGGV---CVDVGEAEDEDYEEVDSDEDEEEDGSDDGGKLSGKV 120
                     +++EG  D GV    +D G+ E+EDYE+ D  ED+E        K SGKV
Sbjct: 61  SDEQIDNVSSTVLEGKDDDGVDGASLDAGD-EEEDYEDEDDSEDDE--------KSSGKV 120

Query: 121 DEDRKGKGIMKDDKGKGKFIEEEEDDDDDDD--DDGSELGSEESDLSDDPLTEVDLDNIL 180
             DRKGKGIMKDDKGKGK IEE++DDDDD+D  DDGS+L SEESDLSDDPL EVDLDNIL
Sbjct: 121 AADRKGKGIMKDDKGKGKLIEEDDDDDDDEDSSDDGSDLDSEESDLSDDPLAEVDLDNIL 180

Query: 181 PSRTRRRTVHPGVYFATDLGNDNDDSSDSDA 195
           PSRTRRR VHPGVYFATDL ND+DDSSDSDA
Sbjct: 181 PSRTRRRMVHPGVYFATDLANDDDDSSDSDA 202

[Close]

BLAST of CmoCh04G023560 vs. NCBI nr
Match: gi|659126319|ref|XP_008463121.1| (PREDICTED: histone H2A.Z-specific chaperone CHZ1 isoform X1 [Cucumis melo])

HSP 1 Score: 194.5 bits (493), Expect = 1.7e-46
Identity = 135/211 (63.98%), Postives = 153/211 (72.51%), Query Frame = 1


Query: 1   MAETTNTEESV-FDAKRK-VDTCSEEKQERSNKIQKLEVVEGD-SCNAVKNGVSGGGIDG 60
           MAE TN +E V FDAKRK  D+C + K+E SNKIQKLEVVEG+ SCN VKN    G   G
Sbjct: 1   MAEITNRKEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNNAENGDHKG 60

Query: 61  D---------SLVEGGKDGGV---CVDVGEAEDEDYEEVDSDEDEEEDGSDDGGKLSGKV 120
                     +++EG  D GV    +D G+ E+EDYE+ D  ED+E        K SGKV
Sbjct: 61  SDEQIDNVSSTVLEGKDDDGVDGASLDAGD-EEEDYEDEDDSEDDE--------KSSGKV 120

Query: 121 DEDRKGKGIMKDDKGKGKFIEEEEDDDDDDD--DDGSELGSEESDLSDDPLTEVDLDNIL 180
             DRKGKGIMKDDKGKGK IEE++DDDDD+D  DDGS+L SEESDLSDDPL EVDLDNIL
Sbjct: 121 AADRKGKGIMKDDKGKGKLIEEDDDDDDDEDSSDDGSDLDSEESDLSDDPLAEVDLDNIL 180

Query: 181 PSRTRRRTVHPGVYFATDLGNDNDDSSDSDA 195
           PSRTRRR VHPGVYFATDL ND+DDSSDSDA
Sbjct: 181 PSRTRRRMVHPGVYFATDLANDDDDSSDSDA 202

[Close]

BLAST of CmoCh04G023560 vs. NCBI nr
Match: gi|659081982|ref|XP_008441603.1| (PREDICTED: protein starmaker-like [Cucumis melo])

HSP 1 Score: 183.0 bits (463), Expect = 5.1e-43
Identity = 126/206 (61.17%), Postives = 149/206 (72.33%), Query Frame = 1


Query: 1   MAETTNTEESV-FDAKRK-VDTCSEEKQERSNKIQKLEVVEGD-SCNAVKNGVSGGGIDG 60
           MAE TN EE V FD KRK VD+C + K+ERSNKIQKLEVV G+ SC+ VKN    G   G
Sbjct: 1   MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKG 60

Query: 61  D---------SLVEGGKDGGVCVDVGEAEDEDYEEVDSDEDEEEDGSDDGGKLSGKVDED 120
                     +++EG  D GV     +A DE+      ++ E+E+ S+D  K SGKV  D
Sbjct: 61  SDEEIDNVSSTVLEGKDDDGVDGASLDARDEE------EDYEDENDSEDDEKSSGKVAAD 120

Query: 121 RKGKGIMKDDKGKGKFIEEEEDDDDDDDDDGSELGSEESDLSDDPLTEVDLDNILPSRTR 180
           RKGKGIMKDDKGKGK IEE++D+D+D  DDGS+L S+ESDLSDDPL EVDLDNILPSRTR
Sbjct: 121 RKGKGIMKDDKGKGKLIEEDDDNDEDSSDDGSDLDSDESDLSDDPLAEVDLDNILPSRTR 180

Query: 181 RRTVHPGVYFATDLGNDNDDSSDSDA 195
           RRTVHPGVY+ TDL ND+DDSSDSDA
Sbjct: 181 RRTVHPGVYYVTDLANDDDDSSDSDA 200

[Close]

BLAST of CmoCh04G023560 vs. NCBI nr
Match: gi|645250082|ref|XP_008231043.1| (PREDICTED: histone H2A.Z-specific chaperone CHZ1 [Prunus mume])

HSP 1 Score: 132.5 bits (332), Expect = 8.0e-28
Identity = 104/196 (53.06%), Postives = 122/196 (62.24%), Query Frame = 1


Query: 1   MAETTNTEESVFDAKRKVDTCSEEKQERSNKIQKLEVVEGDSCNAVKNGVSGGGIDGDSL 60
           MAET N  E  F  KRK D   E++ +   K  KLEV +  S  A          D +S 
Sbjct: 1   MAETKNLGEPTFPVKRKPDLSCEDQADYPKKTHKLEVSDISSSLAEGKTQDPENFDQNSS 60

Query: 61  VEGGKDGGVCVDVGEAEDEDYEEVDSDEDEEEDGSDDGGKLSGKVDEDRKGKGIMKDDKG 120
           V   K+     D  EA  +  +E D  ED++ED  +DG K +GK + DRKGKGIM+DDKG
Sbjct: 61  VAEEKN-----DKFEANADPEDEEDFVEDDDED--EDGEKSNGKAEVDRKGKGIMRDDKG 120

Query: 121 KGKFIEEEEDDDDDDDDDG-SELGSEESDLSDDPLTEVDLDNILPSRTRRRTVHPGVYFA 180
           KGK IEE++DD DDD  DG SE    +SDLSDDPL EVDLDNILPSRTRRR V PGVY A
Sbjct: 121 KGKLIEEDDDDSDDDSSDGGSEFEDGDSDLSDDPLAEVDLDNILPSRTRRRQVQPGVYMA 180

Query: 181 TDLGND-NDDSSDSDA 195
            D+GND  DDS DSDA
Sbjct: 181 NDIGNDEEDDSDDSDA 189

The following BLAST results are available for this feature:

BLAST of CmoCh04G023560 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G023560 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMR8_CUCSA	9.7e-49	65.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G312330 PE=4 SV=1	[more]
M5WTN0_PRUPE	4.0e-26	51.28	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011904mg PE=4 SV=1	[more]
A0A078GJC1_BRANA	9.8e-25	49.01	BnaA09g46820D protein OS=Brassica napus GN=BnaA09g46820D PE=4 SV=1	[more]
A0A0D3DPE0_BRAOL	9.8e-25	46.77	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]
A0A0D3DU48_BRAOL	1.7e-24	48.00	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]

BLAST of CmoCh04G023560 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G12830.1	1.8e-22	41.63	unknown protein	[more]

BLAST of CmoCh04G023560 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449466046\|ref\|XP_004150738.1\|	1.4e-48	65.55	PREDICTED: nucleolin [Cucumis sativus]	[more]
gi\|659126321\|ref\|XP_008463122.1\|	5.9e-47	64.45	PREDICTED: histone H2A.Z-specific chaperone CHZ1 isoform X2 [Cucumis melo]	[more]
gi\|659126319\|ref\|XP_008463121.1\|	1.7e-46	63.98	PREDICTED: histone H2A.Z-specific chaperone CHZ1 isoform X1 [Cucumis melo]	[more]
gi\|659081982\|ref\|XP_008441603.1\|	5.1e-43	61.17	PREDICTED: protein starmaker-like [Cucumis melo]	[more]
gi\|645250082\|ref\|XP_008231043.1\|	8.0e-28	53.06	PREDICTED: histone H2A.Z-specific chaperone CHZ1 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c
biological_process	GO:0010373	negative regulation of gibberellin biosynthetic process
biological_process	GO:0010116	positive regulation of abscisic acid biosynthetic process
biological_process	GO:0008284	positive regulation of cell proliferation
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010262	somatic embryogenesis
biological_process	GO:0006626	protein targeting to mitochondrion
biological_process	GO:0009560	embryo sac egg cell differentiation
biological_process	GO:1902600	hydrogen ion transmembrane transport
cellular_component	GO:0045275	respiratory chain complex III
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008121	ubiquinol-cytochrome-c reductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G023560.1	CmoCh04G023560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36899	FAMILY NOT NAMED	coord: 1..194 score: 5.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G023560	CmaCh04G022520	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G023560	CmaCh15G007800	Cucurbita maxima (Rimu)	cmacmoB309
CmoCh04G023560	Cla009099	Watermelon (97103) v1	cmowmB707
CmoCh04G023560	Csa5G312330	Cucumber (Chinese Long) v2	cmocuB722
CmoCh04G023560	MELO3C025062	Melon (DHL92) v3.5.1	cmomeB625
CmoCh04G023560	ClCG01G008240	Watermelon (Charleston Gray)	cmowcgB636
CmoCh04G023560	CSPI05G13540	Wild cucumber (PI 183967)	cmocpiB751
CmoCh04G023560	Lsi09G008710	Bottle gourd (USVL1VR-Ls)	cmolsiB610
CmoCh04G023560	Cp4.1LG13g05640	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G023560	Cp4.1LG01g19640	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G023560	MELO3C025062.2	Melon (DHL92) v3.6.1	cmomedB714
CmoCh04G023560	Cla97C01G008590	Watermelon (97103) v2	cmowmbB676
CmoCh04G023560	Bhi12G001024	Wax gourd	cmowgoB0822
CmoCh04G023560	Carg18306	Silver-seed gourd	carcmoB0716
CmoCh04G023560	Carg01423	Silver-seed gourd	carcmoB1121

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G023560	CmoCh15G008090	Cucurbita moschata (Rifu)	cmocmoB262

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G023560	Cucumber (Chinese Long) v3	cmocucB0854
CmoCh04G023560	Wild cucumber (PI 183967)	cmocpiB742
CmoCh04G023560	Cucumber (Gy14) v2	cgybcmoB634