Carg01423 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01423
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	transcription initiation factor TFIID subunit 11-like
Location	Cucurbita_argyrosperma_scaffold_004 : 870739 .. 871341 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAACTGCCAGTAGTAGAGAGGAGACTGCATTCGATGCGAAGCGCAAACCTGCTGATCCCTGCTGCGAAGCGAAAGAGGAGCGTTCGAACAAGATTCAGAAGCTTGAAGTGGTTGAGGGCGAACCCTGTAATGATGTAAAGAAGAATGGTGACAATGGAGACCATAAGCAAGGTGATGACCAGATTGATAACATTTCTTCGGCTGCGGAAGGGAAAGATGATGGAGTTCTTGCAGCTGATGTAGATGCGGGGGACGAGGGAGAGGATGACGATGATGAAGACGACTGTGAGAACGGTGAAAAGTCGAGTGGGAAAGCGGCTAAGGAGGATCGTAAGGGGAAGGGTATCATGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGACGACGACGACGACGACGATGAAGATTCCAGTGATGATGGAAGCGAATTTGACAATGAAGAAAGCGATTTGTCGGATGATCCACTTGCGGAGGTCGATCTGGACAACATCCTTCCTTCTAGGACGCGGAGGCGAACGGTTCACCCTGGAGTGTATTTTGCTACGGATCTTGGTAACGAAGACGATGATAGCAGCGACAGCGATGCTTGA

mRNA sequence

ATGGCGGAAACTGCCAGTAGTAGAGAGGAGACTGCATTCGATGCGAAGCGCAAACCTGCTGATCCCTGCTGCGAAGCGAAAGAGGAGCGTTCGAACAAGATTCAGAAGCTTGAAGTGGTTGAGGGCGAACCCTGTAATGATGTAAAGAAGAATGGTGACAATGGAGACCATAAGCAAGGTGATGACCAGATTGATAACATTTCTTCGGCTGCGGAAGGGAAAGATGATGGAGTTCTTGCAGCTGATGTAGATGCGGGGGACGAGGGAGAGGATGACGATGATGAAGACGACTGTGAGAACGGTGAAAAGTCGAGTGGGAAAGCGGCTAAGGAGGATCGTAAGGGGAAGGGTATCATGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGACGACGACGACGACGACGATGAAGATTCCAGTGATGATGGAAGCGAATTTGACAATGAAGAAAGCGATTTGTCGGATGATCCACTTGCGGAGGTCGATCTGGACAACATCCTTCCTTCTAGGACGCGGAGGCGAACGGTTCACCCTGGAGTGTATTTTGCTACGGATCTTGGTAACGAAGACGATGATAGCAGCGACAGCGATGCTTGA

Coding sequence (CDS)

ATGGCGGAAACTGCCAGTAGTAGAGAGGAGACTGCATTCGATGCGAAGCGCAAACCTGCTGATCCCTGCTGCGAAGCGAAAGAGGAGCGTTCGAACAAGATTCAGAAGCTTGAAGTGGTTGAGGGCGAACCCTGTAATGATGTAAAGAAGAATGGTGACAATGGAGACCATAAGCAAGGTGATGACCAGATTGATAACATTTCTTCGGCTGCGGAAGGGAAAGATGATGGAGTTCTTGCAGCTGATGTAGATGCGGGGGACGAGGGAGAGGATGACGATGATGAAGACGACTGTGAGAACGGTGAAAAGTCGAGTGGGAAAGCGGCTAAGGAGGATCGTAAGGGGAAGGGTATCATGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGACGACGACGACGACGACGATGAAGATTCCAGTGATGATGGAAGCGAATTTGACAATGAAGAAAGCGATTTGTCGGATGATCCACTTGCGGAGGTCGATCTGGACAACATCCTTCCTTCTAGGACGCGGAGGCGAACGGTTCACCCTGGAGTGTATTTTGCTACGGATCTTGGTAACGAAGACGATGATAGCAGCGACAGCGATGCTTGA

Protein sequence

MAETASSREETAFDAKRKPADPCCEAKEERSNKIQKLEVVEGEPCNDVKKNGDNGDHKQGDDQIDNISSAAEGKDDGVLAADVDAGDEGEDDDDEDDCENGEKSSGKAAKEDRKGKGIMKDDKGKGKLIEEDDDDDDDEDSSDDGSEFDNEESDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNEDDDSSDSDA

Homology

[Close]

BLAST of Carg01423 vs. NCBI nr
Match: XP_022939215.1 (prostatic spermine-binding protein isoform X2 [Cucurbita moschata] >XP_022939216.1 prostatic spermine-binding protein isoform X2 [Cucurbita moschata] >XP_022939218.1 prostatic spermine-binding protein isoform X2 [Cucurbita moschata] >XP_022939219.1 prostatic spermine-binding protein isoform X2 [Cucurbita moschata] >XP_022939220.1 prostatic spermine-binding protein isoform X2 [Cucurbita moschata])

HSP 1 Score: 239.2 bits (609), Expect = 1.2e-59
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MAETASSREETAFDAKRKPADPCCEAKEERSNKIQKLEVVEGEPCNDVKKNGDNGDHKQG 60
           MAETASSREETAFDAKRKPADPCCEAKEERSNKIQKLEVVEGEPCNDVKKNGDNGDHKQG
Sbjct: 1   MAETASSREETAFDAKRKPADPCCEAKEERSNKIQKLEVVEGEPCNDVKKNGDNGDHKQG 60

Query: 61  DDQIDNISSAAEGKDDGVLAADVDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           DDQIDNISSAAEGKDDGVLAADVDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  DDQIDNISSAAEGKDDGVLAADVDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXKLIXXXXXXXXXXXXXXXXXXXXXXXSDLSDDPLAEVDLDNILPSRTRRRTVHP 180
           XXXXXXKLIXXXXXXXXXXXXXXXXXXXXXXXSDLSDDPLAEVDLDNILPSRTRRRTVHP
Sbjct: 121 XXXXXXKLIXXXXXXXXXXXXXXXXXXXXXXXSDLSDDPLAEVDLDNILPSRTRRRTVHP 180

Query: 181 GVYFATDLGNEDDDSSDSDA 201
           GVYFATDLGNEDDDSSDSDA
Sbjct: 181 GVYFATDLGNEDDDSSDSDA 200

[Close]

BLAST of Carg01423 vs. NCBI nr
Match: XP_023551083.1 (nucleolin-like [Cucurbita pepo subsp. pepo] >XP_023551084.1 nucleolin-like [Cucurbita pepo subsp. pepo] >XP_023551085.1 nucleolin-like [Cucurbita pepo subsp. pepo] >XP_023551086.1 nucleolin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231.5 bits (589), Expect = 2.5e-57
Identity = 198/201 (98.51%), Postives = 199/201 (99.00%), Query Frame = 0


Query: 1   MAETASSREETAFDAKRKPADPCCEAKEERSNKIQKLEVVEGEPCNDVKKNGDNGDHKQG 60
           MAETASSREETAFD KRKPADPCCEAKEERSNKIQKLEVVEGEPCNDVKKNGDNGDHKQG
Sbjct: 1   MAETASSREETAFDGKRKPADPCCEAKEERSNKIQKLEVVEGEPCNDVKKNGDNGDHKQG 60

Query: 61  DDQIDNISSAAEGKDDGVLAADVDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           D+QIDNISSAAEGKDDGVLAADVDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  DEQIDNISSAAEGKDDGVLAADVDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXKLI-XXXXXXXXXXXXXXXXXXXXXXXSDLSDDPLAEVDLDNILPSRTRRRTVH 180
           XXXXXXKLI XXXXXXXXXXXXXXXXXXXXXXXSDLSDDPLAEVDLDNILPSRTRRRTVH
Sbjct: 121 XXXXXXKLIXXXXXXXXXXXXXXXXXXXXXXXXSDLSDDPLAEVDLDNILPSRTRRRTVH 180

Query: 181 PGVYFATDLGNEDDDSSDSDA 201
           PGVYFATDLGNEDDDSSDSDA
Sbjct: 181 PGVYFATDLGNEDDDSSDSDA 201

[Close]

BLAST of Carg01423 vs. NCBI nr
Match: XP_022992871.1 (nucleolin-like [Cucurbita maxima] >XP_022992872.1 nucleolin-like [Cucurbita maxima] >XP_022992873.1 nucleolin-like [Cucurbita maxima])

HSP 1 Score: 228.8 bits (582), Expect = 1.6e-56
Identity = 153/200 (76.50%), Postives = 156/200 (78.00%), Query Frame = 0


Query: 1   MAETASSREETAFDAKRKPADPCCEAKEERSNKIQKLEVVEGEPCNDVKKNGDNGDHKQG 60
           MAETASSREETAFDAKRKPADPCCEAKEERSNKIQKLEVVEGEPCNDVKKNGDNGDHKQG
Sbjct: 1   MAETASSREETAFDAKRKPADPCCEAKEERSNKIQKLEVVEGEPCNDVKKNGDNGDHKQG 60

Query: 61  DDQIDNISSAAEGKDDGVLAADVDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           D+QID+ISSAAEGKDDGV AADVDA                                   
Sbjct: 61  DEQIDSISSAAEGKDDGVFAADVDAGNEGEDYNDEDDCENGEKSSGKAAKDRKGKGIMKD 120

Query: 121 XXXXXXKLIXXXXXXXXXXXXXXXXXXXXXXXSDLSDDPLAEVDLDNILPSRTRRRTVHP 180
                  + XXXXXXXXXXXXXXXXXXXXXXXSDLSDDPLAEVDLDNILPSRTRRRTVHP
Sbjct: 121 DKGKGKLIXXXXXXXXXXXXXXXXXXXXXXXXSDLSDDPLAEVDLDNILPSRTRRRTVHP 180

Query: 181 GVYFATDLGNEDDDSSDSDA 201
           GVYFATDLGNEDDDSSDSDA
Sbjct: 181 GVYFATDLGNEDDDSSDSDA 200

[Close]

BLAST of Carg01423 vs. NCBI nr
Match: XP_004150738.1 (PREDICTED: nucleolin [Cucumis sativus] >KGN50883.1 hypothetical protein Csa_5G312330 [Cucumis sativus])

HSP 1 Score: 158.7 bits (400), Expect = 2.1e-35
Identity = 161/203 (79.31%), Postives = 168/203 (82.76%), Query Frame = 0


Query: 1   MAETASSREETAFDAKRKPADPCCEAKEERSNKIQKLEVVEG-EPCNDVKKNGDNGDHKQ 60
           MAE  +  EE AFDAKRKP D C + KEERSNKIQKLEVVEG E CN V  N +NGDHK 
Sbjct: 1   MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKG 60

Query: 61  GDDQIDNISSAA-EGK-DDGVLAADVDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            D+Q+DNISS   EGK DDGV  A +DA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  SDEQVDNISSTVLEGKGDDGVDGASLDA---XXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXKLIXXXXXXXXXXXXXXXXXXXXXXXSDLSDDPLAEVDLDNILPSRTRRRT 180
           XXXXXXXXX   XXXXXXXXXXXXXXXXXX     SDLSDDPLAEVDLDNILPSRTRRRT
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRT 180

Query: 181 VHPGVYFATDLGNEDDDSSDSDA 201
           VHPGVYFATDLGN+DDDSSDSDA
Sbjct: 181 VHPGVYFATDLGNDDDDSSDSDA 200

[Close]

BLAST of Carg01423 vs. NCBI nr
Match: XP_008463121.1 (PREDICTED: acidic repeat-containing protein [Cucumis melo])

HSP 1 Score: 156.0 bits (393), Expect = 1.3e-34
Identity = 152/203 (74.88%), Postives = 160/203 (78.82%), Query Frame = 0


Query: 1   MAETASSREETAFDAKRKPADPCCEAKEERSNKIQKLEVVEG-EPCNDVKKNGDNGDHKQ 60
           MAE  + +EE AFDAKRKPAD C + KEE SNKIQKLEVVEG E CN VK N +NGDHK 
Sbjct: 1   MAEITNRKEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNNAENGDHKG 60

Query: 61  GDDQIDNISSAA-EGK-DDGVLAADVDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            D+QIDN+SS   EGK DDGV  A +DA  XXXXXXXXXXXXXXXXXXXXXXXX      
Sbjct: 61  SDEQIDNVSSTVLEGKDDDGVDGASLDA-GXXXXXXXXXXXXXXXXXXXXXXXXDRKGKG 120

Query: 121 XXXXXXXXXKLIXXXXXXXXXXXXXXXXXXXXXXXSDLSDDPLAEVDLDNILPSRTRRRT 180
              XXXXXX   XXXXXXXXXXXXXXXXXX     SDLSDDPLAEVDLDNILPSRTRRR 
Sbjct: 121 IMKXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRM 180

Query: 181 VHPGVYFATDLGNEDDDSSDSDA 201
           VHPGVYFATDL N+DDDSSDSDA
Sbjct: 181 VHPGVYFATDLANDDDDSSDSDA 202

[Close]

BLAST of Carg01423 vs. TAIR10
Match: AT1G12830.1 (unknown protein)

HSP 1 Score: 60.1 bits (144), Expect = 1.8e-09
Identity = 31/47 (65.96%), Postives = 35/47 (74.47%), Query Frame = 0


Query: 159 PLAEVDLDNILPSRTRRRTVHPGVYFATDLGN-----EDDDSSDSDA 201
           PLAEVDLDNILPSRTRRR+  PGV+   +  N     EDD+SSDSDA
Sbjct: 167 PLAEVDLDNILPSRTRRRSSQPGVFIPNEFSNRHVNDEDDESSDSDA 213

[Close]

BLAST of Carg01423 vs. TrEMBL
Match: tr|A0A0A0KMR8|A0A0A0KMR8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G312330 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.4e-35
Identity = 161/203 (79.31%), Postives = 168/203 (82.76%), Query Frame = 0


Query: 1   MAETASSREETAFDAKRKPADPCCEAKEERSNKIQKLEVVEG-EPCNDVKKNGDNGDHKQ 60
           MAE  +  EE AFDAKRKP D C + KEERSNKIQKLEVVEG E CN V  N +NGDHK 
Sbjct: 1   MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNNAENGDHKG 60

Query: 61  GDDQIDNISSAA-EGK-DDGVLAADVDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            D+Q+DNISS   EGK DDGV  A +DA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  SDEQVDNISSTVLEGKGDDGVDGASLDA---XXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXKLIXXXXXXXXXXXXXXXXXXXXXXXSDLSDDPLAEVDLDNILPSRTRRRT 180
           XXXXXXXXX   XXXXXXXXXXXXXXXXXX     SDLSDDPLAEVDLDNILPSRTRRRT
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRT 180

Query: 181 VHPGVYFATDLGNEDDDSSDSDA 201
           VHPGVYFATDLGN+DDDSSDSDA
Sbjct: 181 VHPGVYFATDLGNDDDDSSDSDA 200

[Close]

BLAST of Carg01423 vs. TrEMBL
Match: tr|A0A1S3CIW7|A0A1S3CIW7_CUCME (acidic repeat-containing protein OS=Cucumis melo OX=3656 GN=LOC103501347 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 8.9e-35
Identity = 152/203 (74.88%), Postives = 160/203 (78.82%), Query Frame = 0


Query: 1   MAETASSREETAFDAKRKPADPCCEAKEERSNKIQKLEVVEG-EPCNDVKKNGDNGDHKQ 60
           MAE  + +EE AFDAKRKPAD C + KEE SNKIQKLEVVEG E CN VK N +NGDHK 
Sbjct: 1   MAEITNRKEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNNAENGDHKG 60

Query: 61  GDDQIDNISSAA-EGK-DDGVLAADVDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            D+QIDN+SS   EGK DDGV  A +DA  XXXXXXXXXXXXXXXXXXXXXXXX      
Sbjct: 61  SDEQIDNVSSTVLEGKDDDGVDGASLDA-GXXXXXXXXXXXXXXXXXXXXXXXXDRKGKG 120

Query: 121 XXXXXXXXXKLIXXXXXXXXXXXXXXXXXXXXXXXSDLSDDPLAEVDLDNILPSRTRRRT 180
              XXXXXX   XXXXXXXXXXXXXXXXXX     SDLSDDPLAEVDLDNILPSRTRRR 
Sbjct: 121 IMKXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRM 180

Query: 181 VHPGVYFATDLGNEDDDSSDSDA 201
           VHPGVYFATDL N+DDDSSDSDA
Sbjct: 181 VHPGVYFATDLANDDDDSSDSDA 202

[Close]

BLAST of Carg01423 vs. TrEMBL
Match: tr|A0A1S3B3S7|A0A1S3B3S7_CUCME (transcription initiation factor TFIID subunit 11-like OS=Cucumis melo OX=3656 GN=LOC103485687 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.5e-29
Identity = 141/203 (69.46%), Postives = 152/203 (74.88%), Query Frame = 0


Query: 1   MAETASSREETAFDAKRKPADPCCEAKEERSNKIQKLEVVEG-EPCNDVKKNGDNGDHKQ 60
           MAE  +  EE AFD KRKP D C + K+ERSNKIQKLEVV G E C+ VK N +NGDHK 
Sbjct: 1   MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNNAENGDHKG 60

Query: 61  GDDQIDNISSAA-EGK-DDGVLAADVDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            D++IDN+SS   EGK DDGV  A +DA     XXXXXXXXXXXXXXXXXXX        
Sbjct: 61  SDEEIDNVSSTVLEGKDDDGVDGASLDA---RDXXXXXXXXXXXXXXXXXXXKVAADRKG 120

Query: 121 XXXXXXXXXKLIXXXXXXXXXXXXXXXXXXXXXXXSDLSDDPLAEVDLDNILPSRTRRRT 180
               XXXXX   XXXXXXXXXXXXXXXXXXXXXXX    DDPLAEVDLDNILPSRTRRRT
Sbjct: 121 KGIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDPLAEVDLDNILPSRTRRRT 180

Query: 181 VHPGVYFATDLGNEDDDSSDSDA 201
           VHPGVY+ TDL N+DDDSSDSDA
Sbjct: 181 VHPGVYYVTDLANDDDDSSDSDA 200

[Close]

BLAST of Carg01423 vs. TrEMBL
Match: tr|A0A2I4HF99|A0A2I4HF99_9ROSI (pheromone-processing carboxypeptidase KEX1-like OS=Juglans regia OX=51240 GN=LOC109016937 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.3e-13
Identity = 40/48 (83.33%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 153 SDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNEDDDSSDSDA 201
           SDLSDDPLAEVDLDNILPSRTR+RT+ PGVY A+DLGN DDDS  SDA
Sbjct: 147 SDLSDDPLAEVDLDNILPSRTRKRTIQPGVYIASDLGNNDDDSDGSDA 194

[Close]

BLAST of Carg01423 vs. TrEMBL
Match: tr|A0A2I4FTB4|A0A2I4FTB4_9ROSI (nucleolin-like OS=Juglans regia OX=51240 GN=LOC109001861 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.3e-13
Identity = 40/48 (83.33%), Postives = 43/48 (89.58%), Query Frame = 0


Query: 153 SDLSDDPLAEVDLDNILPSRTRRRTVHPGVYFATDLGNEDDDSSDSDA 201
           SDLSDDPLAEVDLDNILPSRTR+RT+ PGVY A+DLGN DDDS  SDA
Sbjct: 151 SDLSDDPLAEVDLDNILPSRTRKRTIQPGVYIASDLGNNDDDSDGSDA 198

The following BLAST results are available for this feature:

BLAST of Carg01423 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939215.1	1.2e-59	100.00	prostatic spermine-binding protein isoform X2 [Cucurbita moschata] >XP_022939216...	[more]
XP_023551083.1	2.5e-57	98.51	nucleolin-like [Cucurbita pepo subsp. pepo] >XP_023551084.1 nucleolin-like [Cucu...	[more]
XP_022992871.1	1.6e-56	76.50	nucleolin-like [Cucurbita maxima] >XP_022992872.1 nucleolin-like [Cucurbita maxi...	[more]
XP_004150738.1	2.1e-35	79.31	PREDICTED: nucleolin [Cucumis sativus] >KGN50883.1 hypothetical protein Csa_5G31...	[more]
XP_008463121.1	1.3e-34	74.88	PREDICTED: acidic repeat-containing protein [Cucumis melo]	[more]

BLAST of Carg01423 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G12830.1	1.8e-09	65.96	unknown protein	[more]

BLAST of Carg01423 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg01423 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KMR8\|A0A0A0KMR8_CUCSA	1.4e-35	79.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G312330 PE=4 SV=1	[more]
tr\|A0A1S3CIW7\|A0A1S3CIW7_CUCME	8.9e-35	74.88	acidic repeat-containing protein OS=Cucumis melo OX=3656 GN=LOC103501347 PE=4 SV...	[more]
tr\|A0A1S3B3S7\|A0A1S3B3S7_CUCME	1.5e-29	69.46	transcription initiation factor TFIID subunit 11-like OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A2I4HF99\|A0A2I4HF99_9ROSI	3.3e-13	83.33	pheromone-processing carboxypeptidase KEX1-like OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2I4FTB4\|A0A2I4FTB4_9ROSI	3.3e-13	83.33	nucleolin-like OS=Juglans regia OX=51240 GN=LOC109001861 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01423-RA	Carg01423-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..63
None	No IPR available	PANTHER	PTHR36899	FAMILY NOT NAMED	coord: 1..200

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01423	Cla009099	Watermelon (97103) v1	carwmB0831
Carg01423	Csa5G312330	Cucumber (Chinese Long) v2	carcuB0844
Carg01423	MELO3C025062	Melon (DHL92) v3.5.1	carmeB0821
Carg01423	ClCG01G008240	Watermelon (Charleston Gray)	carwcgB0800
Carg01423	CSPI05G13540	Wild cucumber (PI 183967)	carcpiB0866
Carg01423	CmaCh15G007800	Cucurbita maxima (Rimu)	carcmaB1148
Carg01423	CmaCh04G022520	Cucurbita maxima (Rimu)	carcmaB1150
Carg01423	CmoCh15G008090	Cucurbita moschata (Rifu)	carcmoB1118
Carg01423	CmoCh04G023560	Cucurbita moschata (Rifu)	carcmoB1121
Carg01423	Lsi09G008710	Bottle gourd (USVL1VR-Ls)	carlsiB754
Carg01423	Cp4.1LG01g19640	Cucurbita pepo (Zucchini)	carcpeB1158
Carg01423	Cp4.1LG13g05640	Cucurbita pepo (Zucchini)	carcpeB1157
Carg01423	MELO3C025062.2	Melon (DHL92) v3.6.1	carmedB0832
Carg01423	Cla97C01G008590	Watermelon (97103) v2	carwmbB0858
Carg01423	Bhi12G001024	Wax gourd	carwgoB0962

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg01423	Carg18306	Silver-seed gourd	carcarB500

The following block(s) are covering this gene:


Gene	Organism	Block
Carg01423	Cucumber (Gy14) v2	carcgybB0818
Carg01423	Cucumber (Gy14) v2	carcgybB0820
Carg01423	Cucumber (Gy14) v1	carcgyB0950
Carg01423	Wild cucumber (PI 183967)	carcpiB0864
Carg01423	Cucumber (Chinese Long) v2	carcuB0847
Carg01423	Cucumber (Chinese Long) v3	carcucB0868
Carg01423	Cucumber (Chinese Long) v3	carcucB0870