Bhi12G001024 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi12G001024
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	transcription initiation factor TFIID subunit 11-like
Location	chr12 : 35410940 .. 35414419 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAAATTATGAAGTTATGCCAAATCTGATCCCGGCTACGAAGCAAAACAGGGTTTTCGTTCATCGATTGATTCTCGTACAGTTTATTCTTCAAAAACCCTAATTTTGTTTTTCTTCCATCGATTCAATTCAACAATTAGGTTTCGAAGCTTCAAAGCTAGGGTTTTTGCGCCACATTAATGGCCGAAACTACCACTATGGAGGAGGTCGCATTTGATGCGAAACGGAAACCTGCTGATCCTTGCTGCGAAGCGAAAGAGGAGCGTTCGAACAAACTTCAGAAGCTCGAAGTGGTTGAAGGTGAAGAATCTTGTAATGATGTGAAGAAGAATGGTGAGAATGGTGATCACCATAAGGAAAATGATGAATCGATTGATAATGTTTCTTCTTCGGTTGCGGAAGGGAAAGATGACGATGGAGTTGTTGGAGCTGATTTAGACGCGGGAGATGAGGTGGAGGATGATGAGGATGAAGACGACAGTGAGAATGGTGAAAAATCGAGTGGAAAAGCGGCGGAGGATCGGAAGGGGAAGGGGATTATGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGATGACGACGACGATGAAGATTCCAGTGACGATGGAAGTGAATTGGATTCTGAAGAGAGCGATTTGTCGGATGATCCACTTGCGGAGGTCGACTTGGACAACATCCTTCCTTCAAGGACGAGGAGGCGAAAGGTTCACCCTGGAGTTTATTTTGCTACGGATCTGGGGAACGACGACGATGATAGCAGTGATAGTGATGCTTGAAACGTTCAGAAGGTCAGTAAATTCGGCAACCGAACCTTGGAGTTTGTAGAAGTGATATGAGTTGATATTTCTCAGTTTTATCTTGTTTAGGGATAATGCAGCAATGTAATGAGTTACTCCATACTATTTGATTTTGAAGGTTACACGTTTTCTTGTTTTCCCACTTTGACATCCAAAGCGTTGAGGGTTGCTTGCATCCATGGCTATCTTTAATATGCATTTTTCTGAACGACGTAGAAGCAATGTTTAGTCTTTCTTTGTAGGAGGGGATTGTACTCACTCACACTCTTAATTGTAAGCTAAAATTAATGGATATCAAGGGAGTTTGTAACATTTGATTCTTCACCTATTGGATATGTTAGTGATGCCAATACTCTTGCACATTGAAATGCAGTTTTTTGAGATTTAGATCATCACTTCCAAGCATTATTACAGTAGAACTTGTCACCAAGAAATACCTTGAGAACAATAAAATGTCGGGTTAAAGTTCTTCTCTTCTCAATGATTGCAACCATGGAGTGAAAATTTTCCTGAAAAAAAAAAGACGAACTTGACGACAATAACTTGATAATCTGTGAGGGAGAAATCCTG

mRNA sequence

GGAAAATTATGAAGTTATGCCAAATCTGATCCCGGCTACGAAGCAAAACAGGGTTTTCGTTCATCGATTGATTCTCGTACAGTTTATTCTTCAAAAACCCTAATTTTGTTTTTCTTCCATCGATTCAATTCAACAATTAGGTTTCGAAGCTTCAAAGCTAGGGTTTTTGCGCCACATTAATGGCCGAAACTACCACTATGGAGGAGGTCGCATTTGATGCGAAACGGAAACCTGCTGATCCTTGCTGCGAAGCGAAAGAGGAGCGTTCGAACAAACTTCAGAAGCTCGAAGTGGTTGAAGGTGAAGAATCTTGTAATGATGTGAAGAAGAATGGTGAGAATGGTGATCACCATAAGGAAAATGATGAATCGATTGATAATGTTTCTTCTTCGGTTGCGGAAGGGAAAGATGACGATGGAGTTGTTGGAGCTGATTTAGACGCGGGAGATGAGGTGGAGGATGATGAGGATGAAGACGACAGTGAGAATGGTGAAAAATCGAGTGGAAAAGCGGCGGAGGATCGGAAGGGGAAGGGGATTATGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGATGACGACGACGATGAAGATTCCAGTGACGATGGAAGTGAATTGGATTCTGAAGAGAGCGATTTGTCGGATGATCCACTTGCGGAGGTCGACTTGGACAACATCCTTCCTTCAAGGACGAGGAGGCGAAAGGTTCACCCTGGAGTTTATTTTGCTACGGATCTGGGGAACGACGACGATGATAGCAGTGATAGTGATGCTTGAAACGTTCAGAAGGTTACACGTTTTCTTGTTTTCCCACTTTGACATCCAAAGCGTTGAGGGTTGCTTGCATCCATGGCTATCTTTAATATGCATTTTTCTGAACGACGTAGAAGCAATGTTTAGTCTTTCTTTGTAGGAGGGGATTGTACTCACTCACACTCTTAATTGTAAGCTAAAATTAATGGATATCAAGGGAGTTTGTAACATTTGATTCTTCACCTATTGGATATGTTAGTGATGCCAATACTCTTGCACATTGAAATGCAGTTTTTTGAGATTTAGATCATCACTTCCAAGCATTATTACAGTAGAACTTGTCACCAAGAAATACCTTGAGAACAATAAAATGTCGGGTTAAAGTTCTTCTCTTCTCAATGATTGCAACCATGGAGTGAAAATTTTCCTGAAAAAAAAAAGACGAACTTGACGACAATAACTTGATAATCTGTGAGGGAGAAATCCTG

Coding sequence (CDS)

ATGGCCGAAACTACCACTATGGAGGAGGTCGCATTTGATGCGAAACGGAAACCTGCTGATCCTTGCTGCGAAGCGAAAGAGGAGCGTTCGAACAAACTTCAGAAGCTCGAAGTGGTTGAAGGTGAAGAATCTTGTAATGATGTGAAGAAGAATGGTGAGAATGGTGATCACCATAAGGAAAATGATGAATCGATTGATAATGTTTCTTCTTCGGTTGCGGAAGGGAAAGATGACGATGGAGTTGTTGGAGCTGATTTAGACGCGGGAGATGAGGTGGAGGATGATGAGGATGAAGACGACAGTGAGAATGGTGAAAAATCGAGTGGAAAAGCGGCGGAGGATCGGAAGGGGAAGGGGATTATGAAGGATGACAAAGGAAAAGGGAAATTGATAGAGGAAGATGACGACGACGATGAAGATTCCAGTGACGATGGAAGTGAATTGGATTCTGAAGAGAGCGATTTGTCGGATGATCCACTTGCGGAGGTCGACTTGGACAACATCCTTCCTTCAAGGACGAGGAGGCGAAAGGTTCACCCTGGAGTTTATTTTGCTACGGATCTGGGGAACGACGACGATGATAGCAGTGATAGTGATGCTTGA

Protein sequence

MAETTTMEEVAFDAKRKPADPCCEAKEERSNKLQKLEVVEGEESCNDVKKNGENGDHHKENDESIDNVSSSVAEGKDDDGVVGADLDAGDEVEDDEDEDDSENGEKSSGKAAEDRKGKGIMKDDKGKGKLIEEDDDDDEDSSDDGSELDSEESDLSDDPLAEVDLDNILPSRTRRRKVHPGVYFATDLGNDDDDSSDSDA

Homology

[Close]

BLAST of Bhi12G001024 vs. TAIR10
Match: AT1G12830.1 (unknown protein)

HSP 1 Score: 57.8 bits (138), Expect = 9.1e-09
Identity = 30/47 (63.83%), Postives = 34/47 (72.34%), Query Frame = 0


Query: 159 PLAEVDLDNILPSRTRRRKVHPGVYFATDLGN-----DDDDSSDSDA 201
           PLAEVDLDNILPSRTRRR   PGV+   +  N     +DD+SSDSDA
Sbjct: 167 PLAEVDLDNILPSRTRRRSSQPGVFIPNEFSNRHVNDEDDESSDSDA 213

[Close]

BLAST of Bhi12G001024 vs. TrEMBL
Match: tr|A0A1S3CIW7|A0A1S3CIW7_CUCME (acidic repeat-containing protein OS=Cucumis melo OX=3656 GN=LOC103501347 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.3e-43
Identity = 161/203 (79.31%), Postives = 164/203 (80.79%), Query Frame = 0


Query: 1   MAE-TTTMEEVAFDAKRKPADPCCEAKEERSNKLQKLEVVEGEESCNDVKKNXXXXXXXX 60
           MAE T   EEVAFDAKRKPAD C + KEE SNK+QKLEVVEGEESCN VK N        
Sbjct: 1   MAEITNRKEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNN-AENGDHK 60

Query: 61  XXXXSIDNVSSSVAEGKDDDGVVGADLDAGDEVXXXXXXXXXXXXXXXXXXXXXXXXGKG 120
                IDNVSS+V EGKDDDGV GA LDAG   XXXXXXXXXXXXXXXXXXXXX   GKG
Sbjct: 61  GSDEQIDNVSSTVLEGKDDDGVDGASLDAGXXXXXXXXXXXXXXXXXXXXXXXXDRKGKG 120

Query: 121 IMK--DDKXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRK 180
           IMK     XXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRR 
Sbjct: 121 IMKXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRM 180

Query: 181 VHPGVYFATDLGNDDDDSSDSDA 201
           VHPGVYFATDL NDDDDSSDSDA
Sbjct: 181 VHPGVYFATDLANDDDDSSDSDA 202

[Close]

BLAST of Bhi12G001024 vs. TrEMBL
Match: tr|A0A0A0KMR8|A0A0A0KMR8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G312330 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.6e-39
Identity = 154/201 (76.62%), Postives = 159/201 (79.10%), Query Frame = 0


Query: 1   MAETTTM-EEVAFDAKRKPADPCCEAKEERSNKLQKLEVVEGEESCNDVKKNXXXXXXXX 60
           MAE T   EEVAFDAKRKP D C + KEERSNK+QKLEVVEGEESCN V  N        
Sbjct: 1   MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNN-AENGDHK 60

Query: 61  XXXXSIDNVSSSVAEGKDDDGVVGADLDAGDEVXXXXXXXXXXXXXXXXXXXXXXXXGKG 120
                +DN+SS+V EGK DDGV GA LDA    XXXXXXXXXXXXXXXXXXXXXXXX   
Sbjct: 61  GSDEQVDNISSTVLEGKGDDGVDGASLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 IMKDDKXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRKVH 180
                 XXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRR VH
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRTVH 180

Query: 181 PGVYFATDLGNDDDDSSDSDA 201
           PGVYFATDLGNDDDDSSDSDA
Sbjct: 181 PGVYFATDLGNDDDDSSDSDA 200

[Close]

BLAST of Bhi12G001024 vs. TrEMBL
Match: tr|A0A1S3B3S7|A0A1S3B3S7_CUCME (transcription initiation factor TFIID subunit 11-like OS=Cucumis melo OX=3656 GN=LOC103485687 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.3e-35
Identity = 141/201 (70.15%), Postives = 147/201 (73.13%), Query Frame = 0


Query: 1   MAETTTM-EEVAFDAKRKPADPCCEAKEERSNKLQKLEVVEGEESCNDVKKNXXXXXXXX 60
           MAE T   EEVAFD KRKP D C + K+ERSNK+QKLEVV GEESC+ VK N        
Sbjct: 1   MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNN-AENGDHK 60

Query: 61  XXXXSIDNVSSSVAEGKDDDGVVGADLDAGDEVXXXXXXXXXXXXXXXXXXXXXXXXGKG 120
                IDNVSS+V EGKDDDGV GA LDA D  XXXXXXXXXXXXXXXXX       GKG
Sbjct: 61  GSDEEIDNVSSTVLEGKDDDGVDGASLDARDXXXXXXXXXXXXXXXXXXXKVAADRKGKG 120

Query: 121 IMKDDKXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRKVH 180
           IM    XXXXXXXXXXXXXXXXXXXXXX         DDPLAEVDLDNILPSRTRRR VH
Sbjct: 121 IMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDPLAEVDLDNILPSRTRRRTVH 180

Query: 181 PGVYFATDLGNDDDDSSDSDA 201
           PGVY+ TDL NDDDDSSDSDA
Sbjct: 181 PGVYYVTDLANDDDDSSDSDA 200

[Close]

BLAST of Bhi12G001024 vs. TrEMBL
Match: tr|M5WTN0|M5WTN0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G311900 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 8.7e-14
Identity = 114/201 (56.72%), Postives = 129/201 (64.18%), Query Frame = 0


Query: 1   MAETTTMEEVAFDAKRKPADPCCEAKEERSNKLQKLEVVEGEESCNDVKKNXXXXXXXXX 60
           MAET  + E  F  KRKP D  CE + +   K  KLEV +   S  + K           
Sbjct: 1   MAETNNLGEPTFPVKRKP-DLSCEDQADYPKKTHKLEVSDISSSLAEGKTQDPENF---- 60

Query: 61  XXXSIDNVSSSVAEGKDDDGVVGADLDAGDEVXXXXXXXXXXXXXXXXXXXXXXXXGKGI 120
                 + +SSVAE  +D     A+ D     XXXXXXXXXXXXXXXXXXXX    GKGI
Sbjct: 61  ------DQNSSVAEEINDK--FEANADPEXXXXXXXXXXXXXXXXXXXXXXXVDRKGKGI 120

Query: 121 MKDDK-XXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRKVH 180
           M+DDK    XXXXXXXXXXXXXXXXXXX +  +SDLSDDPLAEVDL NILPSRTRRR+V 
Sbjct: 121 MRDDKGKGKXXXXXXXXXXXXXXXXXXXFEDGDSDLSDDPLAEVDLHNILPSRTRRRQVQ 180

Query: 181 PGVYFATDLGND-DDDSSDSD 200
           PGVY A D+GND +DDS DSD
Sbjct: 181 PGVYMANDIGNDEEDDSDDSD 188

[Close]

BLAST of Bhi12G001024 vs. TrEMBL
Match: tr|A0A2I4HF99|A0A2I4HF99_9ROSI (pheromone-processing carboxypeptidase KEX1-like OS=Juglans regia OX=51240 GN=LOC109016937 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 5.6e-13
Identity = 40/53 (75.47%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 148 LDSEESDLSDDPLAEVDLDNILPSRTRRRKVHPGVYFATDLGNDDDDSSDSDA 201
           + + ESDLSDDPLAEVDLDNILPSRTR+R + PGVY A+DLGN+DDDS  SDA
Sbjct: 142 ISNGESDLSDDPLAEVDLDNILPSRTRKRTIQPGVYIASDLGNNDDDSDGSDA 194

[Close]

BLAST of Bhi12G001024 vs. NCBI nr
Match: XP_008463121.1 (PREDICTED: acidic repeat-containing protein [Cucumis melo])

HSP 1 Score: 184.5 bits (467), Expect = 3.5e-43
Identity = 161/203 (79.31%), Postives = 164/203 (80.79%), Query Frame = 0


Query: 1   MAE-TTTMEEVAFDAKRKPADPCCEAKEERSNKLQKLEVVEGEESCNDVKKNXXXXXXXX 60
           MAE T   EEVAFDAKRKPAD C + KEE SNK+QKLEVVEGEESCN VK N        
Sbjct: 1   MAEITNRKEEVAFDAKRKPADSCFQPKEESSNKIQKLEVVEGEESCNYVKNN-AENGDHK 60

Query: 61  XXXXSIDNVSSSVAEGKDDDGVVGADLDAGDEVXXXXXXXXXXXXXXXXXXXXXXXXGKG 120
                IDNVSS+V EGKDDDGV GA LDAG   XXXXXXXXXXXXXXXXXXXXX   GKG
Sbjct: 61  GSDEQIDNVSSTVLEGKDDDGVDGASLDAGXXXXXXXXXXXXXXXXXXXXXXXXDRKGKG 120

Query: 121 IMK--DDKXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRK 180
           IMK     XXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRR 
Sbjct: 121 IMKXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRM 180

Query: 181 VHPGVYFATDLGNDDDDSSDSDA 201
           VHPGVYFATDL NDDDDSSDSDA
Sbjct: 181 VHPGVYFATDLANDDDDSSDSDA 202

[Close]

BLAST of Bhi12G001024 vs. NCBI nr
Match: XP_022992871.1 (nucleolin-like [Cucurbita maxima] >XP_022992872.1 nucleolin-like [Cucurbita maxima] >XP_022992873.1 nucleolin-like [Cucurbita maxima])

HSP 1 Score: 179.9 bits (455), Expect = 8.7e-42
Identity = 136/204 (66.67%), Postives = 145/204 (71.08%), Query Frame = 0


Query: 1   MAET-TTMEEVAFDAKRKPADPCCEAKEERSNKLQKLEVVEGEESCNDVKKNXXXXXXXX 60
           MAET ++ EE AFDAKRKPADPCCEAKEERSNK+QKLEVVEG E CNDVKKN        
Sbjct: 1   MAETASSREETAFDAKRKPADPCCEAKEERSNKIQKLEVVEG-EPCNDVKKN-GDNGDHK 60

Query: 61  XXXXSIDNVSSSVAEGKDDDGVVGADLDAGDEVXXXXXXXXXXXXXXXXXXXXXXXXGKG 120
                ID++SS+ AEGK DDGV  AD+DAG+E                         GKG
Sbjct: 61  QGDEQIDSISSA-AEGK-DDGVFAADVDAGNEGEDYNDEDDCENGEKSSGKAAKDRKGKG 120

Query: 121 IMKDDK---XXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRR 180
           IMKDDK      XXXXXXXXXXXXXXXXXXX     SDLSDDPLAEVDLDNILPSRTRRR
Sbjct: 121 IMKDDKGKGKLIXXXXXXXXXXXXXXXXXXXXXXXXSDLSDDPLAEVDLDNILPSRTRRR 180

Query: 181 KVHPGVYFATDLGNDDDDSSDSDA 201
            VHPGVYFATDLGN+DDDSSDSDA
Sbjct: 181 TVHPGVYFATDLGNEDDDSSDSDA 200

[Close]

BLAST of Bhi12G001024 vs. NCBI nr
Match: XP_004150738.1 (PREDICTED: nucleolin [Cucumis sativus] >KGN50883.1 hypothetical protein Csa_5G312330 [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 6.9e-39
Identity = 154/201 (76.62%), Postives = 159/201 (79.10%), Query Frame = 0


Query: 1   MAETTTM-EEVAFDAKRKPADPCCEAKEERSNKLQKLEVVEGEESCNDVKKNXXXXXXXX 60
           MAE T   EEVAFDAKRKP D C + KEERSNK+QKLEVVEGEESCN V  N        
Sbjct: 1   MAEITNREEEVAFDAKRKPTDSCFQPKEERSNKIQKLEVVEGEESCNYVNNN-AENGDHK 60

Query: 61  XXXXSIDNVSSSVAEGKDDDGVVGADLDAGDEVXXXXXXXXXXXXXXXXXXXXXXXXGKG 120
                +DN+SS+V EGK DDGV GA LDA    XXXXXXXXXXXXXXXXXXXXXXXX   
Sbjct: 61  GSDEQVDNISSTVLEGKGDDGVDGASLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 IMKDDKXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRKVH 180
                 XXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRR VH
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRTVH 180

Query: 181 PGVYFATDLGNDDDDSSDSDA 201
           PGVYFATDLGNDDDDSSDSDA
Sbjct: 181 PGVYFATDLGNDDDDSSDSDA 200

[Close]

BLAST of Bhi12G001024 vs. NCBI nr
Match: XP_008441603.1 (PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo] >XP_008441604.1 PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo] >XP_008441605.1 PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo] >XP_008441606.1 PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo] >XP_016899453.1 PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo] >XP_016899454.1 PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo])

HSP 1 Score: 157.9 bits (398), Expect = 3.5e-35
Identity = 141/201 (70.15%), Postives = 147/201 (73.13%), Query Frame = 0


Query: 1   MAETTTM-EEVAFDAKRKPADPCCEAKEERSNKLQKLEVVEGEESCNDVKKNXXXXXXXX 60
           MAE T   EEVAFD KRKP D C + K+ERSNK+QKLEVV GEESC+ VK N        
Sbjct: 1   MAEITNREEEVAFDVKRKPVDSCFQPKKERSNKIQKLEVVAGEESCSYVKNN-AENGDHK 60

Query: 61  XXXXSIDNVSSSVAEGKDDDGVVGADLDAGDEVXXXXXXXXXXXXXXXXXXXXXXXXGKG 120
                IDNVSS+V EGKDDDGV GA LDA D  XXXXXXXXXXXXXXXXX       GKG
Sbjct: 61  GSDEEIDNVSSTVLEGKDDDGVDGASLDARDXXXXXXXXXXXXXXXXXXXKVAADRKGKG 120

Query: 121 IMKDDKXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRRKVH 180
           IM    XXXXXXXXXXXXXXXXXXXXXX         DDPLAEVDLDNILPSRTRRR VH
Sbjct: 121 IMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDPLAEVDLDNILPSRTRRRTVH 180

Query: 181 PGVYFATDLGNDDDDSSDSDA 201
           PGVY+ TDL NDDDDSSDSDA
Sbjct: 181 PGVYYVTDLANDDDDSSDSDA 200

[Close]

BLAST of Bhi12G001024 vs. NCBI nr
Match: XP_022939215.1 (prostatic spermine-binding protein isoform X2 [Cucurbita moschata] >XP_022939216.1 prostatic spermine-binding protein isoform X2 [Cucurbita moschata] >XP_022939218.1 prostatic spermine-binding protein isoform X2 [Cucurbita moschata] >XP_022939219.1 prostatic spermine-binding protein isoform X2 [Cucurbita moschata] >XP_022939220.1 prostatic spermine-binding protein isoform X2 [Cucurbita moschata])

HSP 1 Score: 155.6 bits (392), Expect = 1.8e-34
Identity = 150/204 (73.53%), Postives = 158/204 (77.45%), Query Frame = 0


Query: 1   MAET-TTMEEVAFDAKRKPADPCCEAKEERSNKLQKLEVVEGEESCNDVKKNXXXXXXXX 60
           MAET ++ EE AFDAKRKPADPCCEAKEERSNK+QKLEVVEG E CNDVKKN        
Sbjct: 1   MAETASSREETAFDAKRKPADPCCEAKEERSNKIQKLEVVEG-EPCNDVKKN-GDNGDHK 60

Query: 61  XXXXSIDNVSSSVAEGKDDDGVVGADLDA---GDEVXXXXXXXXXXXXXXXXXXXXXXXX 120
                IDN+SS+ AEGK DDGV+ AD+DA       XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  QGDDQIDNISSA-AEGK-DDGVLAADVDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 GKGIMKDDKXXXXXXXXXXXXXXXXXXXXXXLDSEESDLSDDPLAEVDLDNILPSRTRRR 180
                    X   XXXXXXXXXXXXXXXXXX     SDLSDDPLAEVDLDNILPSRTRRR
Sbjct: 121 XXXXXXXXXXKLIXXXXXXXXXXXXXXXXXXXXXXXSDLSDDPLAEVDLDNILPSRTRRR 180

Query: 181 KVHPGVYFATDLGNDDDDSSDSDA 201
            VHPGVYFATDLGN+DDDSSDSDA
Sbjct: 181 TVHPGVYFATDLGNEDDDSSDSDA 200

The following BLAST results are available for this feature:

BLAST of Bhi12G001024 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi12G001024 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G12830.1	9.1e-09	63.83	unknown protein	[more]

BLAST of Bhi12G001024 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CIW7\|A0A1S3CIW7_CUCME	2.3e-43	79.31	acidic repeat-containing protein OS=Cucumis melo OX=3656 GN=LOC103501347 PE=4 SV...	[more]
tr\|A0A0A0KMR8\|A0A0A0KMR8_CUCSA	4.6e-39	76.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G312330 PE=4 SV=1	[more]
tr\|A0A1S3B3S7\|A0A1S3B3S7_CUCME	2.3e-35	70.15	transcription initiation factor TFIID subunit 11-like OS=Cucumis melo OX=3656 GN...	[more]
tr\|M5WTN0\|M5WTN0_PRUPE	8.7e-14	56.72	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G311900 PE=4 SV=1	[more]
tr\|A0A2I4HF99\|A0A2I4HF99_9ROSI	5.6e-13	75.47	pheromone-processing carboxypeptidase KEX1-like OS=Juglans regia OX=51240 GN=LOC...	[more]

BLAST of Bhi12G001024 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463121.1	3.5e-43	79.31	PREDICTED: acidic repeat-containing protein [Cucumis melo]	[more]
XP_022992871.1	8.7e-42	66.67	nucleolin-like [Cucurbita maxima] >XP_022992872.1 nucleolin-like [Cucurbita maxi...	[more]
XP_004150738.1	6.9e-39	76.62	PREDICTED: nucleolin [Cucumis sativus] >KGN50883.1 hypothetical protein Csa_5G31...	[more]
XP_008441603.1	3.5e-35	70.15	PREDICTED: transcription initiation factor TFIID subunit 11-like [Cucumis melo] ...	[more]
XP_022939215.1	1.8e-34	73.53	prostatic spermine-binding protein isoform X2 [Cucurbita moschata] >XP_022939216...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008284	positive regulation of cell proliferation
biological_process	GO:0010116	positive regulation of abscisic acid biosynthetic process
biological_process	GO:0010373	negative regulation of gibberellin biosynthetic process
biological_process	GO:0006626	protein targeting to mitochondrion
biological_process	GO:1902600	hydrogen ion transmembrane transport
biological_process	GO:0009560	embryo sac egg cell differentiation
biological_process	GO:0006413	translational initiation
biological_process	GO:0008150	biological_process
biological_process	GO:0010262	somatic embryogenesis
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0045275	respiratory chain complex III
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008121	ubiquinol-cytochrome-c reductase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004180	carboxypeptidase activity
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003743	translation initiation factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M001024	Bhi12M001024	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..102
None	No IPR available	PANTHER	PTHR36899	FAMILY NOT NAMED	coord: 1..200

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi12G001024	MELO3C025062	Melon (DHL92) v3.5.1	mewgoB017
Bhi12G001024	ClCG01G008240	Watermelon (Charleston Gray)	wcgwgoB194
Bhi12G001024	CSPI05G13540	Wild cucumber (PI 183967)	cpiwgoB445
Bhi12G001024	CmaCh15G007800	Cucurbita maxima (Rimu)	cmawgoB0373
Bhi12G001024	CmoCh04G023560	Cucurbita moschata (Rifu)	cmowgoB0822
Bhi12G001024	CmoCh15G008090	Cucurbita moschata (Rifu)	cmowgoB0367
Bhi12G001024	Lsi09G008710	Bottle gourd (USVL1VR-Ls)	lsiwgoB009
Bhi12G001024	Cp4.1LG13g05640	Cucurbita pepo (Zucchini)	cpewgoB0218
Bhi12G001024	Cp4.1LG01g19640	Cucurbita pepo (Zucchini)	cpewgoB0490
Bhi12G001024	MELO3C025062.2	Melon (DHL92) v3.6.1	medwgoB015
Bhi12G001024	Carg18306	Silver-seed gourd	carwgoB0637
Bhi12G001024	Carg01423	Silver-seed gourd	carwgoB0962
Bhi12G001024	Cla009099	Watermelon (97103) v1	wgowmB078
Bhi12G001024	Cla97C01G008590	Watermelon (97103) v2	wgowmbB057

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi12G001024	Cucumber (Gy14) v2	cgybwgoB417
Bhi12G001024	Cucurbita maxima (Rimu)	cmawgoB0827
Bhi12G001024	Wild cucumber (PI 183967)	cpiwgoB461
Bhi12G001024	Cucumber (Chinese Long) v3	cucwgoB452
Bhi12G001024	Cucumber (Chinese Long) v2	cuwgoB441