MELO3C024165.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C024165.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr01 : 4756124 .. 4760964 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTTTTTGCCATGTCACTTGGCTAAAACCCTACTCCCATCCCCTTCCCTTCCCCATTTCAGCTTCCATCAACTTCCCCTCTCGTAGCAATTTCTTCATAATTTCTTGGCTCAATATTCTCATGGCGGCGTTTCAATTTCAATCTCGTCTTCAAGTTTCGAAGATTTTGTCTTCATCAATTCGGAAATGGGAAATAGATTTTCCTCTCCTCCACAATCCATTGCGAACGCCGGATTTCTCTCTCTCGCCGGCGCCATCTCGTCGTTTTTCCTCCAATTCCATGGATGACGATCGTGCCTTCTCGGAGTCCGAGCCGAGAAACACCCCGCCGCAACGTCGTTTTCCTCCAGATCATCGCGAAGCTCGTCGTGTTCCCAGAGGGGGAGTAACTGATTCTTACGATAATCGAAATCAACGCTTTAATAGGCATTCAGAAGGTTCCTCTTCTCGATTCACAAATGAAGGGTCGACTTCGCGGCAAAGGAGTGAGTCTTTATCTCAGAAGGATTTTAGCTTTCTTGAAAAATTCAAGCTGAATACTGATAATCAGAGTAGTGGTAACGAGAAGACTGAGGAGAACTCTTCTTCTGCTCCGGTTTCTGAATCAATGCAGGAGAAGCAGCAATCGCAACATCAGCGTCCTCCAGCAGCTGATGAGATATTCAGGAAAATGAAGGAATCTGGTTTAATTCCCAATGCCGTTGCTATGCTTGACGGGCTTTGTAAAGATGGACTTATACAAGAAGCAATGAAGCTTTTTGCTTTGATTCGTGAGAAAGGTACAATTCCAGAAGTTGTGATTTACACTGCTGTTGTTGATGGGTTTTGCAAGGCGGAGAAATTTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAATAAGGGTATTTCTCCAAATGCCTTCAGTTTTGGTGTCTTGATACAGGGATTGTACAAATGCAAAAAATTAGATGATGCTGTAGCATTTTGCAATGAGATGTTAGAATCTGGGCATTTACCAAATCTTACCACTTTTGTTGGCCTAATTGATGTGTTATGCAGTGAGAAGGGTGTGGATGAAGCTCATAATGTCGTAGAAACCTTTAAACAAAAGGGATTCTTGATTGATGAGAAAGCTTTAAGGGAATTTTTGAATAAAAGAGCCCCATTTTCACCAGATATCTGGAAAGTGTTCTTTGGTAATAAAAAAGCCCCATTTTTCTGAGATTGTTGTCGTAGTGTTGTAAGTCTTCTCTCTTTTCCCTTTTATGTAATATCTTATATAATTCAAGTTATGTTTACTATAGATTATATGGAGTAATTTGAGTAGTCACCGATATGTTTGCAACGAGAATTGCCTTCAATCTTTTGATTGCTTCTATAAGTTTTCACGAATGGTTGGGTACAAAAATTATAAGATACGAAACAAGGAAAAGGAGAATAGCCCGTTTGTTACTTTGGTATTTACAATCTTTACAATTTATCATATACTATTTAGTTTCATCAGTATCTTTTTTTTTTTTTAATATTTTCATTAGCACTCTGGGATGGTTGTGATTTATAAAAGAGTAAAAACAACCTTTCATTAGAAGAAAAATGAAGGAATACACGGAAATCCAAAAAGCTTAAAAAATTGGGGAAAAAAAATGCACACAGAAAGGAGTGCCACTAGAGAAACGGTGTCTAGTTGTAAAATGATCCCTAACCAATAATTATACACAACCTCCATCCCTGAAGCCTTAAAAAAATTAGGTTTTAACTACTACTTAAGCTTATGTATTTTTTGAATGAGAAACACAACTTTTATTGAGAAAGAATGAAAGAATGTATGAGTACAAAAAACCAAACCCACAAAAAGAAGGAATCTCGTAATCAGAAGGGACTCCAACTATACAAAATTATGTTCATTGAATAATTACAAAAATTTTCGAACAAGAGAACATAAGCCTTCGCTCCCCATCTCAACACCCTACTATTTCTCTTATCACAAAGCACCACGGAATAGCACAAACACTGGCATATTAGAGAAAGCAGCCTTTCTTCCCAAACGGAGGAACTCCTTGATCATGTCTTTATAAACTCTGGGACAAACACTGCTGAAGCCAAAAGTCTGGAAGAAAGAGTCCCAAATACTCATTCTCTTTGTTATCTTCATTCTGGAATATCGATACCTAAGCTTATTTTGATTTCTTCCCATCAAGCTTACTGCACAAGTTTACAAGTTTTAGGATCACTCAACAAAAAGCTAGCCCAACCTATAACCTGTCATTCGATAAGTGCACACTTCAAGTTAAGTTAAAAGCTTCCAAAATCTTACTTAGCATAAACATACAAGAACATACAAGAAGTCACGTAAGCAAAAACATACAAGAACTTAGGTATAATTCTTACTTAGCGTTGCTGTTTCCCCCTCCCTCTTTTTCTGCTTCTTCCTCATCTTCTTCTTCTTATCAACACCAGCTGGAAGTGCAAAAGTTTACATGAATAAATACCATTTTGAGCTTAACCAGTTGAAAAGATTCAATTTGCCTTTAGAACTGATACACAAAATTTCTGGTCTGCATCAGCATATTCATCACTGTTATCACAAACTAAGCATTATGTGTGCATTTCTCACTACATCAATAATTACATTTCCATCCAAATAGTGTTTTATATCGGACTCATGGGACAACCCGCTTGATACTACAACATTTGGGTGTTGAGGAAACTCATAGGAAATTAATTCTTGAATAGATGGTCACCACAGTTTAAACCCATGTCTTCTTAGTTGGATATTGAAACTTCTTTTTATCACTAGACTAATTAATTCCTTGAGGTTTTTCCTCTTGGAGAGGCGAGGCGGAAGCCTCAAATAATGAATTAAAAATGTTTTATAAAACCTAAACTAGCTAAACATGATAGGTGTATAAAAGTGTGAAAAAAAAAACTTCCCACAATTTTGACTTGATAAAAATTCTAAACGGACGTCTTTATCATCATTACTGCTACTATTATTAGTAATAGGATTGATTTATGTTATATATGTTTGCGTTCAACATTCTTAAGTTCACTATAGTAGAAATAATCCTAGTTCTAGTTGTCACAACTCAAACCTTAATATCTAGGCAAATCACTAGTTCTAGTTGTCACAACTCAAACCTTAATATCCAGGCAAATCACTATTATTTTTCTAATCACTAGGTGTGGGCCATGAGGTATAGAGATTTTAAGCCTTGATGCCTTTTCACAAAGGCGCAAGCCTCATTTGTGGGAGGAGTAAGCCTCTTATGGTTCAACAAAGGCGTAAGTCTCGAGGCTAAAACTTAGAGCTTTGCCTCGAAATAATAGTAGAAATAATCCTCGTTCTAGTTGTCACAACTCAAACCTTAATATCCAGGCAAATCACTATTATTTTTCTAATCACTAGGTTTGGGCCATGAGGTATAGAGATTTAAGCCTTGATGCCTTTTCACAAAGGCGCAAGCCTCATTTGTGGGAGGTGTAAGCCTCTTATGGTTCAACAAAGGCGTAAGTCTCGAGGCTAAAACTTAGAGCTTTGCCTCGAGGCGGGCCTCAACGTGTAAGCCTCATTAACTTTTTAAAACATGGAATCCAAAACAATAACCGATTGTGAAGATTTAGACTTGGAAGCTCAAGAGGAATCACAATGCAATTTTTAGGCTTCCTAAATATTTGCAGGCAAAGTTGCATCTTATGGGAGAATCGCACTAGTGAATGAAACTCAACTAGACTTGTAGGTCATTACATTTTGGAATTTGATGAGTGGAAGTTCATACTCAAATACTGTGTGCAGATTGTTTGGCTATTATTAGAAAAATACTTAAATGCATCCCAAAATTGCCACATGACAAATTCTTCTTATATCTTTCTTGAAATATTTTAATTCTTTTTTGTGTGTGTAGTGTGAGTGGGATGCATAGAGTTAGAATGCACCTAAGCATGCTTTTACAATTATTAGGATGGTGTTGGGATGCCTAATTGCGCCACCTTAGATTCTAGTTTCTCTTTTTCGCTCTTGTATAATCCTCTTGCTCTTAGAGCTCTTGTATCTCTTTTTTTTACTATTATTAATAAAGAGATCTGTTTCCTTAATATGATATTAAGATGATGTTGGGTCAATAGGAGTTTTCATTTAATAAGGTGGTATAATTTGCATTCTTGTTAGCTATGGCTAAGGTTATGCAGCTCCCTAAATGTTGATGTTTATCTGTTTTTATGTAGGTGAAGGGACCAATCATATTACTGAGAAGAAACCACAAGTTGAAATCATTGTAACTCAGTAGTCAGAATTCAATTATCGTGTTGAAGAATAAAAATCTGGTTGAAGAGTGAACAATCTGCAACTGTTGAAGTGAGAGCTCTAAACCGTCAGTCATGTTCGGGGAACACAAAACTTGTGCAGTCAAGTTCATTGACCTTACGTGAAAGATTGTGCGGACTGGATCAATCGGCATGGGAGACATTAGCTGCAGTTAATAAGTGATGGATATTTTTTGCAAGATTGAACATCAGAAAATCTGTTAAATTCACCATTTACCTCTTAGATTTTTTTTTTTAAACAACAATCATGTAAGGTATGACTATGGCATTGCTTCCTAGTTGCTATCACTAATGGCTATACAGAGTTTCTTTGTCTTTGTGCACTGTGCTTAACTTCCCTTATTTGATTGTAAAGAGTTGTATGTGAGGGAATAGAAACTGTATAAGGATGGAAGGTCTTGTATTCAAATTTTTGTAACGTAATGTTGTTTCTTTTCCAATTGACATCGATTTTTACTTGTAGGTGTTCCACAAATTTTCAAGCCTAAAAGTAAGGAGAATGTTGAATATTGATAATTGATATATTCAAATTTACCACAA

mRNA sequence

GCTTTTTGCCATGTCACTTGGCTAAAACCCTACTCCCATCCCCTTCCCTTCCCCATTTCAGCTTCCATCAACTTCCCCTCTCGTAGCAATTTCTTCATAATTTCTTGGCTCAATATTCTCATGGCGGCGTTTCAATTTCAATCTCGTCTTCAAGTTTCGAAGATTTTGTCTTCATCAATTCGGAAATGGGAAATAGATTTTCCTCTCCTCCACAATCCATTGCGAACGCCGGATTTCTCTCTCTCGCCGGCGCCATCTCGTCGTTTTTCCTCCAATTCCATGGATGACGATCGTGCCTTCTCGGAGTCCGAGCCGAGAAACACCCCGCCGCAACGTCGTTTTCCTCCAGATCATCGCGAAGCTCGTCGTGTTCCCAGAGGGGGAGTAACTGATTCTTACGATAATCGAAATCAACGCTTTAATAGGCATTCAGAAGGTTCCTCTTCTCGATTCACAAATGAAGGGTCGACTTCGCGGCAAAGGAGTGAGTCTTTATCTCAGAAGGATTTTAGCTTTCTTGAAAAATTCAAGCTGAATACTGATAATCAGAGTAGTGGTAACGAGAAGACTGAGGAGAACTCTTCTTCTGCTCCGGTTTCTGAATCAATGCAGGAGAAGCAGCAATCGCAACATCAGCGTCCTCCAGCAGCTGATGAGATATTCAGGAAAATGAAGGAATCTGGTTTAATTCCCAATGCCGTTGCTATGCTTGACGGGCTTTGTAAAGATGGACTTATACAAGAAGCAATGAAGCTTTTTGCTTTGATTCGTGAGAAAGGTACAATTCCAGAAGTTGTGATTTACACTGCTGTTGTTGATGGGTTTTGCAAGGCGGAGAAATTTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAATAAGGGTATTTCTCCAAATGCCTTCAGTTTTGGTGTCTTGATACAGGGATTGTACAAATGCAAAAAATTAGATGATGCTGTAGCATTTTGCAATGAGATGTTAGAATCTGGGCATTTACCAAATCTTACCACTTTTGTTGGCCTAATTGATGTGTTATGCAGTGAGAAGGGTGTGGATGAAGCTCATAATGTCGTAGAAACCTTTAAACAAAAGGGATTCTTGATTGATGAGAAAGCTTTAAGGGAATTTTTGAATAAAAGAGCCCCATTTTCACCAGATATCTGGAAAGTGTTCTTTGGTAATAAAAAAGCCCCATTTTTCTGAGATTGTTGTCGTAGTGTTGTGAAGGGACCAATCATATTACTGAGAAGAAACCACAAGTTGAAATCATTGTAACTCAGTAGTCAGAATTCAATTATCGTGTTGAAGAATAAAAATCTGGTTGAAGAGTGAACAATCTGCAACTGTTGAAGTGAGAGCTCTAAACCGTCAGTCATGTTCGGGGAACACAAAACTTGTGCAGTCAAGTTCATTGACCTTACGTGAAAGATTGTGCGGACTGGATCAATCGGCATGGGAGACATTAGCTGCAGTTAATAAGTGATGGATATTTTTTGCAAGATTGAACATCAGAAAATCTGTTAAATTCACCATTTACCTCTTAGATTTTTTTTTTTAAACAACAATCATGTAAGGTATGACTATGGCATTGCTTCCTAGTTGCTATCACTAATGGCTATACAGAGTTTCTTTGTCTTTGTGCACTGTGCTTAACTTCCCTTATTTGATTGTAAAGAGTTGTATGTGAGGGAATAGAAACTGTATAAGGATGGAAGGTCTTGTATTCAAATTTTTGTAACGTAATGTTGTTTCTTTTCCAATTGACATCGATTTTTACTTGTAGGTGTTCCACAAATTTTCAAGCCTAAAAGTAAGGAGAATGTTGAATATTGATAATTGATATATTCAAATTTACCACAA

Coding sequence (CDS)

GCTTTTTGCCATGTCACTTGGCTAAAACCCTACTCCCATCCCCTTCCCTTCCCCATTTCAGCTTCCATCAACTTCCCCTCTCGTAGCAATTTCTTCATAATTTCTTGGCTCAATATTCTCATGGCGGCGTTTCAATTTCAATCTCGTCTTCAAGTTTCGAAGATTTTGTCTTCATCAATTCGGAAATGGGAAATAGATTTTCCTCTCCTCCACAATCCATTGCGAACGCCGGATTTCTCTCTCTCGCCGGCGCCATCTCGTCGTTTTTCCTCCAATTCCATGGATGACGATCGTGCCTTCTCGGAGTCCGAGCCGAGAAACACCCCGCCGCAACGTCGTTTTCCTCCAGATCATCGCGAAGCTCGTCGTGTTCCCAGAGGGGGAGTAACTGATTCTTACGATAATCGAAATCAACGCTTTAATAGGCATTCAGAAGGTTCCTCTTCTCGATTCACAAATGAAGGGTCGACTTCGCGGCAAAGGAGTGAGTCTTTATCTCAGAAGGATTTTAGCTTTCTTGAAAAATTCAAGCTGAATACTGATAATCAGAGTAGTGGTAACGAGAAGACTGAGGAGAACTCTTCTTCTGCTCCGGTTTCTGAATCAATGCAGGAGAAGCAGCAATCGCAACATCAGCGTCCTCCAGCAGCTGATGAGATATTCAGGAAAATGAAGGAATCTGGTTTAATTCCCAATGCCGTTGCTATGCTTGACGGGCTTTGTAAAGATGGACTTATACAAGAAGCAATGAAGCTTTTTGCTTTGATTCGTGAGAAAGGTACAATTCCAGAAGTTGTGATTTACACTGCTGTTGTTGATGGGTTTTGCAAGGCGGAGAAATTTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAATAAGGGTATTTCTCCAAATGCCTTCAGTTTTGGTGTCTTGATACAGGGATTGTACAAATGCAAAAAATTAGATGATGCTGTAGCATTTTGCAATGAGATGTTAGAATCTGGGCATTTACCAAATCTTACCACTTTTGTTGGCCTAATTGATGTGTTATGCAGTGAGAAGGGTGTGGATGAAGCTCATAATGTCGTAGAAACCTTTAAACAAAAGGGATTCTTGATTGATGAGAAAGCTTTAAGGGAATTTTTGAATAAAAGAGCCCCATTTTCACCAGATATCTGGAAAGTGTTCTTTGGTAATAAAAAAGCCCCATTTTTCTGA

Protein sequence

AFCHVTWLKPYSHPLPFPISASINFPSRSNFFIISWLNILMAAFQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAFSESEPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQRSESLSQKDFSFLEKFKLNTDNQSSGNEKTEENSSSAPVSESMQEKQQSQHQRPPAADEIFRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFCKAEKFDEAIRIFRKMQNKGISPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVGLIDVLCSEKGVDEAHNVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAPFF
Homology
[Close]
BLAST of MELO3C024165.2 vs. NCBI nr
Match: XP_008462006.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Cucumis melo] >XP_008462007.1 PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Cucumis melo])

HSP 1 Score: 438.3 bits (1126), Expect = 2.7e-119
Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0 

Query: 41  MAAFQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAF 100
           MAAFQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAF
Sbjct: 1   MAAFQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAF 60

Query: 101 SESEPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQ 160
           SESEPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQ
Sbjct: 61  SESEPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQ 120

Query: 161 RSESLSQKDFSFLEKFKLNTDNQSXXXXXXXXXXXXXXXXXXXXXXXXXQHQRPPAADEI 220
           RSESLSQKDFSFLEKFKLNTDNQSXXXXXXXXXXXXXXXXXXXXXXXXXQHQRPPAADEI
Sbjct: 121 RSESLSQKDFSFLEKFKLNTDNQSXXXXXXXXXXXXXXXXXXXXXXXXXQHQRPPAADEI 180

Query: 221 FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYXXXXXXXXXXXX 280
           FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYXXXXXXXXXXXX
Sbjct: 181 FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYXXXXXXXXXXXX 240

Query: 281 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 340
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 341 XXXXXXXXXXXXXXXXXXETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAPFF 400
           XXXXXXXXXXXXXXXXXXETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAPFF
Sbjct: 301 XXXXXXXXXXXXXXXXXXETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAPFF 360

[Close]
BLAST of MELO3C024165.2 vs. NCBI nr
Match: XP_004144563.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Cucumis sativus] >KGN43381.1 hypothetical protein Csa_7G029950 [Cucumis sativus])

HSP 1 Score: 379.8 bits (974), Expect = 1.1e-101
Identity = 307/360 (85.28%), Postives = 313/360 (86.94%), Query Frame = 0 

Query: 41  MAAFQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAF 100
           M AFQ QSRLQVSKILSS+IRKWEIDFPLLHNPLRTPDFSL PA SRRF+SNSMDDD AF
Sbjct: 1   MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAF 60

Query: 101 SESEPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQ 160
           S+SEP NTPPQRRFPPDHREARRVPRGGVT SYDNRNQRFNRHSEGSSSRFTNEGSTS Q
Sbjct: 61  SDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRFTNEGSTSPQ 120

Query: 161 RSESLSQKDFSFLEKFKLNTDNQSXXXXXXXXXXXXXXXXXXXXXXXXXQHQRPPAADEI 220
           RSESLSQKDFSFLEKFKLNTDNQS                         + QRPP ADEI
Sbjct: 121 RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEI 180

Query: 221 FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYXXXXXXXXXXXX 280
           F KMKE+GLIPNAVAMLDGLCKDGLIQEAMKLF LIREKGTIPEVVIY XXXXXXXXXXX
Sbjct: 181 FGKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTXXXXXXXXXXX 240

Query: 281 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 340
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 341 XXXXXXXXXXXXXXXXXXETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAPFF 400
           XXXXXXXXXXXXXXXXXX       FLIDEKALRE LNKRAPFSPDIWKVFFGN+K PFF
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF 360

[Close]
BLAST of MELO3C024165.2 vs. NCBI nr
Match: XP_023554525.1 (pentatricopeptide repeat-containing protein At4g38150-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554526.1 pentatricopeptide repeat-containing protein At4g38150-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320.5 bits (820), Expect = 8.3e-84
Identity = 283/360 (78.61%), Postives = 296/360 (82.22%), Query Frame = 0 

Query: 45  QFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAFSESE 104
           Q QSRL+VSKILSS+IR WE  FPLLH+PLRTPD SLSP  SR FSSNSMDDD  FS SE
Sbjct: 7   QLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSE 66

Query: 105 PRNTPPQRRFPPDHREARRVPR----GGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQ 164
           PR++PPQRR PPD REARRVP+    G      DNRNQRFNRHSEGSSSRF NEG  SR+
Sbjct: 67  PRSSPPQRRSPPDPREARRVPKFAGEGSAPYPEDNRNQRFNRHSEGSSSRFANEGPMSRR 126

Query: 165 RSESLSQKDFSFLEKFKLNTDNQSXXXXXXXXXXXXXXXXXXXXXXXXXQHQRPPAADEI 224
           R+ESLSQKDFSFLEKFKLNTDNQS                         Q Q PP ADEI
Sbjct: 127 RNESLSQKDFSFLEKFKLNTDNQS--TSTEKIEPSSSAQFSESMQGEQSQPQCPPEADEI 186

Query: 225 FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYXXXXXXXXXXXX 284
           FRKMKE+GLIPNAVAMLDGLCKDGLIQEAMKLF LIREKGTIPEVV+YXXXXXXXXXXXX
Sbjct: 187 FRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYXXXXXXXXXXXX 246

Query: 285 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 344
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 247 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 306

Query: 345 XXXXXXXXXXXXXXXXXXETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAPFF 401
           XXXXXXXXXXXXXXXX  ET KQKGFLI+EKALREFLNKRAPFSP IW++ FG K   FF
Sbjct: 307 XXXXXXXXXXXXXXXXVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKTKEFF 364

[Close]
BLAST of MELO3C024165.2 vs. NCBI nr
Match: XP_022952706.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata] >XP_022952707.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata])

HSP 1 Score: 316.2 bits (809), Expect = 1.6e-82
Identity = 284/360 (78.89%), Postives = 299/360 (83.06%), Query Frame = 0 

Query: 45  QFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAFSESE 104
           Q QSRL+VSKILSS+IR WE  FPLLH+PLRTPD SLSP  SR FSSNSMDDD  FS SE
Sbjct: 7   QLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSE 66

Query: 105 PRNTPPQRRFPPDHREARRVPR--GGVTDSY--DNRNQRFNRHSEGSSSRFTNEGSTSRQ 164
           PR++PPQRR PPD REARRVP+  G V+  Y  DNRNQRFNRHSEGSSSRF N+G  SR 
Sbjct: 67  PRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFANDGPMSRP 126

Query: 165 RSESLSQKDFSFLEKFKLNTDNQSXXXXXXXXXXXXXXXXXXXXXXXXXQHQRPPAADEI 224
           R+ESLSQKDFSFLEKFKLNTDNQS                         Q Q PP ADEI
Sbjct: 127 RNESLSQKDFSFLEKFKLNTDNQS--TSTEKIEPSSSAQISESMQGKQSQPQCPPEADEI 186

Query: 225 FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYXXXXXXXXXXXX 284
           FRKMKE+GLIPNAVAMLDGLCKDGLIQEAMKLF LIREKGTIPEVV+YXXXXXXXXXXXX
Sbjct: 187 FRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYXXXXXXXXXXXX 246

Query: 285 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 344
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 247 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 306

Query: 345 XXXXXXXXXXXXXXXXXXETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAPFF 401
           XXXXXXXXXXXXXXXXXXET KQKGFLI+EK LR+FLNKRAPFSP IW++ FG K   FF
Sbjct: 307 XXXXXXXXXXXXXXXXXXETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF 364

[Close]
BLAST of MELO3C024165.2 vs. NCBI nr
Match: XP_022969144.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >XP_022969146.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima])

HSP 1 Score: 313.5 bits (802), Expect = 1.0e-81
Identity = 283/360 (78.61%), Postives = 296/360 (82.22%), Query Frame = 0 

Query: 45  QFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAFSESE 104
           Q QSRL+VSKIL S+IR WE  FPLLH+PLRTPD SLSP  SR FSSNSMDDD  FS SE
Sbjct: 7   QLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSE 66

Query: 105 PRNTPPQRRFPPDHREARRVPR--GGVTDSY--DNRNQRFNRHSEGSSSRFTNEGSTSRQ 164
           PR++PPQRR PPD REARRVP+  G V+  Y  DNRNQRFNRH EGS SRF NEG  SR+
Sbjct: 67  PRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANEGPMSRR 126

Query: 165 RSESLSQKDFSFLEKFKLNTDNQSXXXXXXXXXXXXXXXXXXXXXXXXXQHQRPPAADEI 224
           RSESLSQKDFSFLEKFKLNTDN S                         Q Q PP ADEI
Sbjct: 127 RSESLSQKDFSFLEKFKLNTDNLS--TSTEKTEPSSSAQFSESMQGKQSQPQCPPEADEI 186

Query: 225 FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYXXXXXXXXXXXX 284
           FRKMKE+GLIPNAVAMLDGLCKDGLIQEAMKLF LIREKGTIPEVV+YXXXXXXXXXXXX
Sbjct: 187 FRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYXXXXXXXXXXXX 246

Query: 285 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 344
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 247 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 306

Query: 345 XXXXXXXXXXXXXXXXXXETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAPFF 401
           XXXXXXXXXXXXXXXXX ET KQKGFLI+EKALREFLNKRAPFSP IW++ FG K   FF
Sbjct: 307 XXXXXXXXXXXXXXXXXIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKTKEFF 364

[Close]
BLAST of MELO3C024165.2 vs. TAIR10
Match: AT4G38150.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 88.6 bits (218), Expect = 9.6e-18
Identity = 76/192 (39.58%), Postives = 92/192 (47.92%), Query Frame = 0 

Query: 79  FSLSPAPSRRFSSNSMDDDRAFSESEPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQ 138
           F+   A   R ++ SM   R  S  +      Q+  PP+    R  P  G   S      
Sbjct: 10  FARQMAKQIRVTTPSMSATRFLSTGDNGQVDEQQN-PPEPLPNR--PLRGERSS------ 69

Query: 139 RFNRHSEGSSSRFTNEGSTSRQRSESLSQKDFSFLEKFKLNTDNQSXXXXXXXXXXXXXX 198
             N H E  + +  N G +    S      D  FLE+FKL  +  S              
Sbjct: 70  --NSHREPPARQAHNLGKSDTTLS------DDGFLEQFKLGVNQDS-------------- 129

Query: 199 XXXXXXXXXXXQHQRPPA--ADEIFRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALI 258
                      Q   PP   +DEIF+KMKE GLIPNAVAMLDGLCKDGL+QEAMKLF L+
Sbjct: 130 -RETPKPEQYPQEPLPPPEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLM 169

Query: 259 REKGTIPEVVIY 269
           R+KGTIPEVVIY
Sbjct: 190 RDKGTIPEVVIY 169

[Close]
BLAST of MELO3C024165.2 vs. Swiss-Prot
Match: sp|Q9SZL5|PP356_ARATH (Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX=3702 GN=At4g38150 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.7e-16
Identity = 76/192 (39.58%), Postives = 92/192 (47.92%), Query Frame = 0 

Query: 79  FSLSPAPSRRFSSNSMDDDRAFSESEPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQ 138
           F+   A   R ++ SM   R  S  +      Q+  PP+    R  P  G   S      
Sbjct: 10  FARQMAKQIRVTTPSMSATRFLSTGDNGQVDEQQN-PPEPLPNR--PLRGERSS------ 69

Query: 139 RFNRHSEGSSSRFTNEGSTSRQRSESLSQKDFSFLEKFKLNTDNQSXXXXXXXXXXXXXX 198
             N H E  + +  N G +    S      D  FLE+FKL  +  S              
Sbjct: 70  --NSHREPPARQAHNLGKSDTTLS------DDGFLEQFKLGVNQDS-------------- 129

Query: 199 XXXXXXXXXXXQHQRPPA--ADEIFRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALI 258
                      Q   PP   +DEIF+KMKE GLIPNAVAMLDGLCKDGL+QEAMKLF L+
Sbjct: 130 -RETPKPEQYPQEPLPPPEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLM 169

Query: 259 REKGTIPEVVIY 269
           R+KGTIPEVVIY
Sbjct: 190 RDKGTIPEVVIY 169

[Close]
BLAST of MELO3C024165.2 vs. TrEMBL
Match: tr|A0A1S3CFW0|A0A1S3CFW0_CUCME (pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN=LOC103500481 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 1.8e-119
Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0 

Query: 41  MAAFQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAF 100
           MAAFQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAF
Sbjct: 1   MAAFQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAF 60

Query: 101 SESEPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQ 160
           SESEPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQ
Sbjct: 61  SESEPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQ 120

Query: 161 RSESLSQKDFSFLEKFKLNTDNQSXXXXXXXXXXXXXXXXXXXXXXXXXQHQRPPAADEI 220
           RSESLSQKDFSFLEKFKLNTDNQSXXXXXXXXXXXXXXXXXXXXXXXXXQHQRPPAADEI
Sbjct: 121 RSESLSQKDFSFLEKFKLNTDNQSXXXXXXXXXXXXXXXXXXXXXXXXXQHQRPPAADEI 180

Query: 221 FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYXXXXXXXXXXXX 280
           FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYXXXXXXXXXXXX
Sbjct: 181 FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYXXXXXXXXXXXX 240

Query: 281 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 340
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 341 XXXXXXXXXXXXXXXXXXETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAPFF 400
           XXXXXXXXXXXXXXXXXXETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAPFF
Sbjct: 301 XXXXXXXXXXXXXXXXXXETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAPFF 360

[Close]
BLAST of MELO3C024165.2 vs. TrEMBL
Match: tr|A0A0A0K6C0|A0A0A0K6C0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029950 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 7.6e-102
Identity = 307/360 (85.28%), Postives = 313/360 (86.94%), Query Frame = 0 

Query: 41  MAAFQFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAF 100
           M AFQ QSRLQVSKILSS+IRKWEIDFPLLHNPLRTPDFSL PA SRRF+SNSMDDD AF
Sbjct: 1   MGAFQLQSRLQVSKILSSTIRKWEIDFPLLHNPLRTPDFSLYPAQSRRFASNSMDDDHAF 60

Query: 101 SESEPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQ 160
           S+SEP NTPPQRRFPPDHREARRVPRGGVT SYDNRNQRFNRHSEGSSSRFTNEGSTS Q
Sbjct: 61  SDSEPINTPPQRRFPPDHREARRVPRGGVTASYDNRNQRFNRHSEGSSSRFTNEGSTSPQ 120

Query: 161 RSESLSQKDFSFLEKFKLNTDNQSXXXXXXXXXXXXXXXXXXXXXXXXXQHQRPPAADEI 220
           RSESLSQKDFSFLEKFKLNTDNQS                         + QRPP ADEI
Sbjct: 121 RSESLSQKDFSFLEKFKLNTDNQSSGKEKTEENSSSAPVSESMLEKQQSEPQRPPEADEI 180

Query: 221 FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYXXXXXXXXXXXX 280
           F KMKE+GLIPNAVAMLDGLCKDGLIQEAMKLF LIREKGTIPEVVIY XXXXXXXXXXX
Sbjct: 181 FGKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTXXXXXXXXXXX 240

Query: 281 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 340
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 341 XXXXXXXXXXXXXXXXXXETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAPFF 400
           XXXXXXXXXXXXXXXXXX       FLIDEKALRE LNKRAPFSPDIWKVFFGN+K PFF
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXFLIDEKALREVLNKRAPFSPDIWKVFFGNRKPPFF 360

[Close]
BLAST of MELO3C024165.2 vs. TrEMBL
Match: tr|A0A2P5SNR5|A0A2P5SNR5_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD02344 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 2.9e-24
Identity = 188/305 (61.64%), Postives = 215/305 (70.49%), Query Frame = 0 

Query: 95  DDDRAFSESEPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNE 154
           DDD A      R    +R F P  RE           S+D     F    +  +++F ++
Sbjct: 58  DDDGATEHISKRPLRGRRPFNPSFRETEGA-------SFDRNRSSF----QSPNAKFASD 117

Query: 155 GSTSRQRSESLSQKDFSFLEKFKLNTDNQSXXXXXXXXXXXXXXXXXXXXXXXXXQHQR- 214
            +  R+ S+S    D +FLEKFKL  +N+                          +H+  
Sbjct: 118 PTKKREDSQS----DVNFLEKFKLGLENK------------RERVPSESEAMHRKEHEEK 177

Query: 215 ---PPAADEIFRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYXX 274
              P  ADEIF+KMKE+GLIPNAVAMLDGLCKDGLIQEAMKLF L+REKGTIPEVVIYXX
Sbjct: 178 LSPPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYXX 237

Query: 275 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 334
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 238 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 297

Query: 335 XXXXXXXXXXXXXXXXXXXXXXXXXXXXETFKQKGFLIDEKALREFLNKRAPFSPDIWKV 394
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX   KQKGFL+++KA+R+FL+KRAPFSP +W+ 
Sbjct: 298 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKQKGFLVNDKAVRQFLDKRAPFSPLVWEA 335

Query: 395 FFGNK 396
            FG K
Sbjct: 358 IFGKK 335

[Close]
BLAST of MELO3C024165.2 vs. TrEMBL
Match: tr|A0A0D2S9H9|A0A0D2S9H9_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G065500 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.7e-24
Identity = 188/305 (61.64%), Postives = 215/305 (70.49%), Query Frame = 0 

Query: 95  DDDRAFSESEPRNTPPQRRFPPDHREARRVPRGGVTDSYDNRNQRFNRHSEGSSSRFTNE 154
           DDD A      R    +R F P  RE           S+D     F    +  +++F ++
Sbjct: 58  DDDGATEHIPKRPLRGRRPFNPSFRETEGA-------SFDRNRSSF----QSPNAKFASD 117

Query: 155 GSTSRQRSESLSQKDFSFLEKFKLNTDNQSXXXXXXXXXXXXXXXXXXXXXXXXXQHQR- 214
            +  R+ S+S    D +FLEKFKL  +N+                          +H+  
Sbjct: 118 PTKKREDSQS----DVNFLEKFKLGLENK------------RERVPSESEAMHRKEHEEK 177

Query: 215 ---PPAADEIFRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYXX 274
              P  ADEIF+KMKE+GLIPNAVAMLDGLCKDGLIQEAMKLF L+REKGTIPEVVIYXX
Sbjct: 178 LSPPEDADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLMREKGTIPEVVIYXX 237

Query: 275 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 334
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 238 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 297

Query: 335 XXXXXXXXXXXXXXXXXXXXXXXXXXXXETFKQKGFLIDEKALREFLNKRAPFSPDIWKV 394
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX   KQKGFL+++KA+R+FL+KRAPFSP +W+ 
Sbjct: 298 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKQKGFLVNDKAVRQFLDKRAPFSPLVWEA 335

Query: 395 FFGNK 396
            FG K
Sbjct: 358 IFGKK 335

[Close]
BLAST of MELO3C024165.2 vs. TrEMBL
Match: tr|A0A1S3VLM9|A0A1S3VLM9_VIGRR (pentatricopeptide repeat-containing protein At4g38150 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106776356 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.2e-23
Identity = 188/315 (59.68%), Postives = 217/315 (68.89%), Query Frame = 0 

Query: 91  SNSMDDDRAFSESEPRNTPPQR-------RFPPDHREARRVPRGGVTDSYDNRNQRFNRH 150
           SNS+   R     +P N PP R        FPP   ++   P  G  D+  N++ + +  
Sbjct: 91  SNSI-PSRPLRSRKPINQPPPRFRESGRGSFPPRFDDSHGAP--GALDN-SNKSSKIDLA 150

Query: 151 SEGSSSRFTNEGSTSRQRSESLSQKDFSFLEKFKLNTDNQSXXXXXXXXXXXXXXXXXXX 210
            +G     TN   T+R     L Q   SFL+KFKL  D+++                   
Sbjct: 151 FQG-----TNVAETNR----DLGQSGDSFLDKFKLAFDDKT-VNQSEVAASTQSEEAKWS 210

Query: 211 XXXXXXQHQRPPAADEIFRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIP 270
                 Q   P  ADEIF+KMKE+GLIPNAVAMLDGLCKDGL+QEA+KLF L+REKGTIP
Sbjct: 211 DSNPKAQEPVPQDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIP 270

Query: 271 EVVIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 330
           E+VIY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 271 EIVIYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 330

Query: 331 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETFKQKGFLIDEKALREFLNKRAPF 390
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +T  +KGF  DEKA+R+FL+K+ PF
Sbjct: 331 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIKTLTKKGFAFDEKAVRQFLDKKTPF 390

Query: 391 SPDIWKVFFGNKKAP 399
           SP +W+  FG KKAP
Sbjct: 391 SPSVWEAIFG-KKAP 390

The following BLAST results are available for this feature:
BLAST of MELO3C024165.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008462006.12.7e-119100.00PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Cucumis melo] ... [more]
XP_004144563.11.1e-10185.28PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Cucumis sativu... [more]
XP_023554525.18.3e-8478.61pentatricopeptide repeat-containing protein At4g38150-like isoform X1 [Cucurbita... [more]
XP_022952706.11.6e-8278.89pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata] ... [more]
XP_022969144.11.0e-8178.61pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >X... [more]
BLAST of MELO3C024165.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G38150.19.6e-1839.58Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of MELO3C024165.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SZL5|PP356_ARATH1.7e-1639.58Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX... [more]
BLAST of MELO3C024165.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CFW0|A0A1S3CFW0_CUCME1.8e-119100.00pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A0A0K6C0|A0A0A0K6C0_CUCSA7.6e-10285.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029950 PE=4 SV=1[more]
tr|A0A2P5SNR5|A0A2P5SNR5_GOSBA2.9e-2461.64Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD02344 PE=4 SV... [more]
tr|A0A0D2S9H9|A0A0D2S9H9_GOSRA3.7e-2461.64Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G065500 PE=4 ... [more]
tr|A0A1S3VLM9|A0A1S3VLM9_VIGRR3.2e-2359.68pentatricopeptide repeat-containing protein At4g38150 isoform X1 OS=Vigna radiat... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024165.2.1MELO3C024165.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 197..381
e-value: 3.6E-38
score: 133.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 235..260
e-value: 1.4E-4
score: 21.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 263..312
e-value: 7.0E-16
score: 58.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 235..263
e-value: 1.1E-4
score: 20.1
coord: 266..300
e-value: 9.5E-11
score: 39.2
coord: 302..334
e-value: 2.8E-5
score: 22.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 264..298
score: 13.285
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 299..333
score: 10.556
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 334..368
score: 8.089
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 229..263
score: 8.616
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..169
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 131..397
NoneNo IPR availablePANTHERPTHR24015:SF337SUBFAMILY NOT NAMEDcoord: 131..397

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C024165.2Csa7G029950Cucumber (Chinese Long) v2cumedB509
MELO3C024165.2CSPI07G02380Wild cucumber (PI 183967)cpimedB523
MELO3C024165.2Cucsa.100010Cucumber (Gy14) v1cgymedB119
MELO3C024165.2CmaCh19G008270Cucurbita maxima (Rimu)cmamedB534
MELO3C024165.2CmaCh11G012950Cucurbita maxima (Rimu)cmamedB108
MELO3C024165.2CmoCh19G008440Cucurbita moschata (Rifu)cmomedB521
MELO3C024165.2Cp4.1LG04g04250Cucurbita pepo (Zucchini)cpemedB717
MELO3C024165.2Cla015717Watermelon (97103) v1medwmB233
MELO3C024165.2Cla97C02G029680Watermelon (97103) v2medwmbB164
MELO3C024165.2Bhi05G001326Wax gourdmedwgoB212
MELO3C024165.2Carg04123Silver-seed gourdcarmedB0204
MELO3C024165.2CsaV3_7G002250Cucumber (Chinese Long) v3cucmedB536
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None