MELO3C023260 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C023260
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	50S ribosomal protein L2, putative
Location	chr11 : 579461 .. 583248 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAGTATAGTTGGTGTTGGAGAAGCTGAAACCCCACAAAACCCTCTCCCGCGGCCGTCCTATTTTCTCTTTGCTTCCTCTTCTCAATCTCACTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCAGGTGAAATCATTATTCTCTATTCTTCTTTCCAATTTCAATCGCCTTCCTTAACATCTGGATTCACTCCCTTTCGCATTGCTTCAATCGGAAGTGTTATGGCTATGATGAGATCCGCCTCCGCGGTTGCTCTTCGTGGCCTCAGGAGGTTCTCTTCCAGAAGGCCAGTTTCATCTCCAATCATTCAGGCACAGGAACAACCCACCTCCGACCTTTTAGTTTCTGGCAAGTCCCTCTTCCCATTTTTGTTACTTTCTTTGTCTTTTCATTTTGAGTTCTAAGATTTCCCTGTGGTTGGACTGTTTCTCTCCTCTCGTGTATTGTTTTTGCTTACTTATTCTAGTTTTTCGTCTTTTGTTTTTACAACTATCTTAGTACTGTCTGTCTTCAAGAGGGTTTTTATTGATTGATTGATCGGTTCTCATCATTCGGTGATATTTGTTGATTTAAAACATCAATGGAGATTGAATGCTTTCTTTTTATTGTTTGGATTCGATTGTTTTTTACATAGGGAGAAAATTGGAAGCATTTGACTGTGATATAGGAAAGGGATTTTAGAATTTTCCATGTGCTGGGGAAGGAACCCAGGTAGTAACTTGGCTATGTAAAGAAAAAGGAAAATAGAAAATTCTCTTATTAATTGAAAATTTTCAACAAAAGAAAAGGTACAAACTTCCAAGAAGGAGCAAATCACAAACCAATCTAGAGCCGAAAACTTACAAGAAAAACTCAGAACCCATCGACCAGAACTATTGAGATCAATATAAGTCAAACAAACCAGGGAAAGGGTGGCCTGCCACTGACAAAGCATTGTACAAAGCTCCACTATCATACTCTTGCCTCACTAAAAAGGAAGAAATTTGCCAAAGTTAATTGCCAATCTTTCTCTCCTTCACCAATGAATAATTGCAATTTTCATTTTCCATAGCTACATCTCCTAACTGAACAACAGAAAAGATTGAGACACTTTCTGCCTGAGGCTGCGACCTCGTAGGTAAAGCTTGCTTTTTAATCTGCAGCTTCTCTCTTCTTATAAATCAACTGTCCAGAATAAATAAATTAATAAATAAATCACCTGTTCTGAAATAAGACAGATGTTATTTGGCTCAACTTCATTTGAGACTTTCTTTGGTCTTGGAATGAAAGAAACCAAAGATTTCTTTTCTGGAAAAGACATAAAGTTCTCTTCTTTCATGGACAATGTCGCTTGGTGTAGGCTTAAAAATCTCTTTTGTAACTATTCCTTTCATAAGCCTTTCTTAATGCATACCCCACTCATAAGCCTTAAACACTTGAGAACTAAGACAAGATATATTTCCTTTGTAAAAATTACTAAAATATTTTATATATTTTGACAATCACGACCCGAAGCTTGAGTATCACCAATTTAAGAAAAAAAAATGATTACATTAGTATTGTAGAATGAAAATGGACTTGAAGGAGAACACAAAAAAAGAAGCATAACTCTTTGTGAAGTCCCATCTAATAACCCATTCAGGGTTTTTTTTTTTTTTTATTATTATTATTATTATTATTATTATTATTATTATTATTANNNNNNNNNNNNNNNNNNNNATTTATTATTATTATTATTATTATTATTATTATTATTCAAAGATTCTCTGGTTCCTTTCAAACCCAATACTTCAAAGAATACTCTGATCACATTTATTCATCGTAGTTCAACTTTTTTCTTCAACTTCATAACACATAGTTGGAAGTTTCTTTTTTGGAAAGCCGAAGTTGAAAGTTATTCTCAAGGTTTTATCAAACACCCATGCGAAAACGAAAGCTGTTCTCAAATCTTACCACTTTAAGCACAGTGAATAGATAAATGAAAGTTATCTTCACCTGCTAAAAACGCTGGCTGAACGTGGCAATTCGACATCAAAGCAATGTACTTTCGATTGTCGACCGTGGTAAGTTTATTCAAATGTGTGAATCACATGGGAGTATTGATTTTTGGGGATTTTTTTTATCCCCAACCTTATTTATTTAGATTCATTGATTTGCACCACAAATTTTGAATTTCAACAAATCAAACTCTAGACTTAGACACTTATCTTCCCACTGATTTAACAGAATCCAAAGTAAAATTCTCTTAAAACCAGCTAAGTTCAATAATAATAATAATAAAAGAAAAATCTTAAGCCGTTTGCAAACTTCAACCCAATCAATGCACAGGGGTGATTGTAGTATCTTTTCCATTGAATCAATCTCCTAAAATGGCCTAATTTCTCGATGTAACAATAGAAATATCCAAGGATTTGGTCCTTGTTTCATGAATATTATTGCACATATCTAGAATGAAATGACTTTGTCTATCGATTCGTTAGTAAAAAACCTTTGCCAATTCTTCTTCTTTGGATCTCCTTCCTTTTTCTGGAACAGAAAAGACTAAAGAGTGGTCATTGTCATTTTTTTTTCCTTTTATTATTTTTTTGCTACATGATCACTTGAAGAATGAAGAAACCTGGAAAAGTCAAAGATTACTGAATTTTTTTTTAATATTTCATCGAACAGCTTGAAGTTAGAAGCTTCCTTTTCTCATATGGATGACTTTGGTAGAAAATGGAAATATGTTCTCATGTGCCCGGTTTGGTTAGGATTTTCGTACTAATTTTGTAAAAGCTGTATTTTACTGTTTATTTTAATTTACCTTTTGAATTATTGATGTCGGGTGAAGTAGTGTATTCTAAAACTTGGAGCTTGTTTGGAATGACTTTGAGAGTGTCAAAAATTTGTTTCCACGCATTTAAAAAGTCATTCCAGATTGGAGCTTCTTCAACCTTGTATTGAATTTTAATTATTTGTGGATGGGAAAAAAAGTATAAGTGGTCTTTTTTCTTTAAAGTAGAATATTAGTGAGCTTTTTAGTTTGATATTTTATCGATTTATCCTACAATTAATATCTACTTCGTATGTCATATTTTTCCTTAATGTATTAGAATTCTTCTTCTAGGATCATTATGTTAAGAATACTTTTATTGTCATTGTTCACAGATATGGCCAGGGTAGAGGGTCGGACGTTCCGTGAACGAATGGCAAATTACATGGCTACTCTTGACATCAATTCACAAATTGGAAGCTGCATGCCGCTTGGTGCAATGCGCATTGGTACGATTATCCACAATATCGAGATAAACCCGGGCCAAGGCGGGAAGCTGGTGCGATCAGCAGGAACATTTGCAAGGATATTAAAACTGCCAGAGGGAAAGTCAAGATGCTGCTTGGTGAAACTCCCTTCACGTGAAGAGAAGTTCATTGATGCTAAGTGCAGGGCAACAATTGGTCAGGTATCTAACCCGGGTCATGGTGCCAAGAAACTGAGAAAGGCAGGGCAGAGTCGATGGTTGGGTCGACGACCGACGGTTCGAGGAGTGGCGATGAACCCAGTGGATCATCCTCATGGAGGGGGTGAGGGTAAGAGCAAGAGTAGTGGGAGCCATGGAAGGGGGTCTCGGACACCTTGGGGGAAGCCAACTAAGTGTGGTTACAAGACTCGATCTCCCAAGCGCAAAAGACAAGTGTAAGCAAACTCTTCATCTTTCCTTTGAAATCTATTTTCTTGAGGATGGTTTTGAAATACTCTTTTGAGCCTTTTGATTGAATTGAATTACACTTTCATCATCAAACTAATATTTGGAGGAAATTGATGTAGAATTTT

mRNA sequence

GTAGTATAGTTGGTGTTGGAGAAGCTGAAACCCCACAAAACCCTCTCCCGCGGCCGTCCTATTTTCTCTTTGCTTCCTCTTCTCAATCTCACTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCAGGTGAAATCATTATTCTCTATTCTTCTTTCCAATTTCAATCGCCTTCCTTAACATCTGGATTCACTCCCTTTCGCATTGCTTCAATCGGAAGTGTTATGGCTATGATGAGATCCGCCTCCGCGGTTGCTCTTCGTGGCCTCAGGAGGTTCTCTTCCAGAAGGCCAGTTTCATCTCCAATCATTCAGGCACAGGAACAACCCACCTCCGACCTTTTAGTTTCTGATATGGCCAGGGTAGAGGGTCGGACGTTCCGTGAACGAATGGCAAATTACATGGCTACTCTTGACATCAATTCACAAATTGGAAGCTGCATGCCGCTTGGTGCAATGCGCATTGGTACGATTATCCACAATATCGAGATAAACCCGGGCCAAGGCGGGAAGCTGGTGCGATCAGCAGGAACATTTGCAAGGATATTAAAACTGCCAGAGGGAAAGTCAAGATGCTGCTTGGTGAAACTCCCTTCACGTGAAGAGAAGTTCATTGATGCTAAGTGCAGGGCAACAATTGGTCAGGTATCTAACCCGGGTCATGGTGCCAAGAAACTGAGAAAGGCAGGGCAGAGTCGATGGTTGGGTCGACGACCGACGGTTCGAGGAGTGGCGATGAACCCAGTGGATCATCCTCATGGAGGGGGTGAGGGTAAGAGCAAGAGTAGTGGGAGCCATGGAAGGGGGTCTCGGACACCTTGGGGGAAGCCAACTAAGTGTGGTTACAAGACTCGATCTCCCAAGCGCAAAAGACAAGTGTAAGCAAACTCTTCATCTTTCCTTTGAAATCTATTTTCTTGAGGATGGTTTTGAAATACTCTTTTGAGCCTTTTGATTGAATTGAATTACACTTTCATCATCAAACTAATATTTGGAGGAAATTGATGTAGAATTTT

Coding sequence (CDS)

ATGGCTATGATGAGATCCGCCTCCGCGGTTGCTCTTCGTGGCCTCAGGAGGTTCTCTTCCAGAAGGCCAGTTTCATCTCCAATCATTCAGGCACAGGAACAACCCACCTCCGACCTTTTAGTTTCTGATATGGCCAGGGTAGAGGGTCGGACGTTCCGTGAACGAATGGCAAATTACATGGCTACTCTTGACATCAATTCACAAATTGGAAGCTGCATGCCGCTTGGTGCAATGCGCATTGGTACGATTATCCACAATATCGAGATAAACCCGGGCCAAGGCGGGAAGCTGGTGCGATCAGCAGGAACATTTGCAAGGATATTAAAACTGCCAGAGGGAAAGTCAAGATGCTGCTTGGTGAAACTCCCTTCACGTGAAGAGAAGTTCATTGATGCTAAGTGCAGGGCAACAATTGGTCAGGTATCTAACCCGGGTCATGGTGCCAAGAAACTGAGAAAGGCAGGGCAGAGTCGATGGTTGGGTCGACGACCGACGGTTCGAGGAGTGGCGATGAACCCAGTGGATCATCCTCATGGAGGGGGTGAGGGTAAGAGCAAGAGTAGTGGGAGCCATGGAAGGGGGTCTCGGACACCTTGGGGGAAGCCAACTAAGTGTGGTTACAAGACTCGATCTCCCAAGCGCAAAAGACAAGTGTAA

Protein sequence

MAMMRSASAVALRGLRRFSSRRPVSSPIIQAQEQPTSDLLVSDMARVEGRTFRERMANYMATLDINSQIGSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGTFARILKLPEGKSRCCLVKLPSREEKFIDAKCRATIGQVSNPGHGAKKLRKAGQSRWLGRRPTVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSPKRKRQV*

Homology

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BLAST of MELO3C023260 vs. Swiss-Prot
Match: RM02_ORYSA (60S ribosomal protein L2, mitochondrial OS=Oryza sativa GN=RPL2 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.2e-50
Identity = 96/156 (61.54%), Postives = 120/156 (76.92%), Query Frame = 1


Query: 63  LDINSQIGSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGTFARILKLPEGKSRCCLVKL 122
           LD+NS++G+ +PL  +R+GT +H+IE +PGQG KL R+AGT+A+I+K P  +   CLV+L
Sbjct: 354 LDLNSKVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQ---CLVRL 413

Query: 123 PSREEKFIDAKCRATIGQVSNPGHGAKKLRKAGQSRWLGRRPTVRGVAMNPVDHPHGGGE 182
           PS  EK ID++CRATIG VSNP HGA+KLRKAGQSRW GRRP VRGVAMNPVDHPHGGGE
Sbjct: 414 PSGVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPHGGGE 473

Query: 183 GKSKSSGSHGRGSRTPWGKPTKCGYKTRSPKRKRQV 219
           G++K     GR S +PWGKPTK G++      KR++
Sbjct: 474 GRTKG----GRPSVSPWGKPTKAGFRAGVGVGKRRI 502

[Close]

BLAST of MELO3C023260 vs. Swiss-Prot
Match: RM02_ORYSI (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. indica GN=RPL2 PE=3 SV=2)

HSP 1 Score: 200.3 bits (508), Expect = 2.2e-50
Identity = 96/156 (61.54%), Postives = 120/156 (76.92%), Query Frame = 1


Query: 63  LDINSQIGSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGTFARILKLPEGKSRCCLVKL 122
           LD+NS++G+ +PL  +R+GT +H+IE +PGQG KL R+AGT+A+I+K P  +   CLV+L
Sbjct: 354 LDLNSKVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQ---CLVRL 413

Query: 123 PSREEKFIDAKCRATIGQVSNPGHGAKKLRKAGQSRWLGRRPTVRGVAMNPVDHPHGGGE 182
           PS  EK ID++CRATIG VSNP HGA+KLRKAGQSRW GRRP VRGVAMNPVDHPHGGGE
Sbjct: 414 PSGVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPHGGGE 473

Query: 183 GKSKSSGSHGRGSRTPWGKPTKCGYKTRSPKRKRQV 219
           G++K     GR S +PWGKPTK G++      KR++
Sbjct: 474 GRTKG----GRPSVSPWGKPTKAGFRAGVGVGKRRI 502

[Close]

BLAST of MELO3C023260 vs. Swiss-Prot
Match: RM02_ORYSJ (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. japonica GN=RPL2 PE=2 SV=2)

HSP 1 Score: 200.3 bits (508), Expect = 2.2e-50
Identity = 96/156 (61.54%), Postives = 120/156 (76.92%), Query Frame = 1


Query: 63  LDINSQIGSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGTFARILKLPEGKSRCCLVKL 122
           LD+NS++G+ +PL  +R+GT +H+IE +PGQG KL R+AGT+A+I+K P  +   CLV+L
Sbjct: 354 LDLNSKVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQ---CLVRL 413

Query: 123 PSREEKFIDAKCRATIGQVSNPGHGAKKLRKAGQSRWLGRRPTVRGVAMNPVDHPHGGGE 182
           PS  EK ID++CRATIG VSNP HGA+KLRKAGQSRW GRRP VRGVAMNPVDHPHGGGE
Sbjct: 414 PSGVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPHGGGE 473

Query: 183 GKSKSSGSHGRGSRTPWGKPTKCGYKTRSPKRKRQV 219
           G++K     GR S +PWGKPTK G++      KR++
Sbjct: 474 GRTKG----GRPSVSPWGKPTKAGFRAGVGVGKRRI 502

[Close]

BLAST of MELO3C023260 vs. Swiss-Prot
Match: RM02_MARPO (60S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha GN=RPL2 PE=3 SV=2)

HSP 1 Score: 189.1 bits (479), Expect = 5.1e-47
Identity = 92/147 (62.59%), Postives = 111/147 (75.51%), Query Frame = 1


Query: 69  IGSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGTFARILKLPEGKSRCCLVKLPSREEK 128
           +G+C+PL  + IGT +HNIE NPGQG KL R+AGTFA+I++  E   +C +V+LPS  +K
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQC-IVRLPSGVDK 418

Query: 129 FIDAKCRATIGQVSNPGHGAKKLRKAGQSRWLGRRPTVRGVAMNPVDHPHGGGEGKSKSS 188
            ID++CRATIG VSN  HG +K  KAGQSRWLGRRP VRGVAMNPVDHPHGGGEG++K  
Sbjct: 419 LIDSRCRATIGIVSNLNHGKRKFNKAGQSRWLGRRPIVRGVAMNPVDHPHGGGEGRTKG- 478

Query: 189 GSHGRGSRTPWGKPTKCGYKTRSPKRK 216
              GR S +PWGKPTK G+KT   KR+
Sbjct: 479 ---GRPSVSPWGKPTKGGFKTVVRKRR 500

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BLAST of MELO3C023260 vs. Swiss-Prot
Match: RL2_GRABC (50S ribosomal protein L2 OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=rplB PE=3 SV=2)

HSP 1 Score: 164.1 bits (414), Expect = 1.7e-39
Identity = 84/145 (57.93%), Postives = 104/145 (71.72%), Query Frame = 1


Query: 70  GSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGTFARILKLPEGKSRCCLVKLPSREEKF 129
           G+ MPLGA+ +GTIIHNIE+ PG GGK+ RSAGT+A+++    G ++   +KL S E + 
Sbjct: 127 GNAMPLGAIPVGTIIHNIEMKPGAGGKIARSAGTYAQLVGKDAGYAQ---IKLMSGELRV 186

Query: 130 IDAKCRATIGQVSNPGHGAKKLRKAGQSRWLGRRPTVRGVAMNPVDHPHGGGEGKSKSSG 189
           + A+C AT+G VSNP +    + KAG+SRWLGRRP  RGV MNPVDHPHGGGEG++    
Sbjct: 187 VRAECYATVGAVSNPDNSNIHIGKAGRSRWLGRRPHNRGVVMNPVDHPHGGGEGRT---- 246

Query: 190 SHGRGSRTPWGKPTKCGYKTRSPKR 215
           S GR   TPWGKPTK GYKTR+ KR
Sbjct: 247 SGGRHPVTPWGKPTK-GYKTRTNKR 263

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BLAST of MELO3C023260 vs. TrEMBL
Match: A0A0A0LQ76_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302080 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 2.3e-91
Identity = 166/175 (94.86%), Postives = 166/175 (94.86%), Query Frame = 1


Query: 44  MARVEGRTFRERMANYMATLDINSQIGSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGT 103
           MA VEGRTFRERM NYMATLDINSQIGSCMPLG MRIGTIIHNIEINPGQGGKLVRSAGT
Sbjct: 1   MAGVEGRTFRERMTNYMATLDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGT 60

Query: 104 FARILKLPEGKSRCCLVKLPSREEKFIDAKCRATIGQVSNPGHGAKKLRKAGQSRWLGRR 163
            ARILKLPEGKSRCCLVKLPSREEK IDAKCRATIGQVSNPGHG KKLRKAGQSRWLGRR
Sbjct: 61  SARILKLPEGKSRCCLVKLPSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRR 120

Query: 164 PTVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSPKRKRQV 219
           P VRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRS KRKR V
Sbjct: 121 PKVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKRKRPV 175

[Close]

BLAST of MELO3C023260 vs. TrEMBL
Match: D7T2J7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0094g01100 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 3.3e-69
Identity = 131/165 (79.39%), Postives = 142/165 (86.06%), Query Frame = 1


Query: 52  FRERMANYMATLDINSQIGSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGTFARILKLP 111
           FRE M N M +LDINSQIGSCMPL AMRIGTIIHNIEINPGQGGKLVR+AGT A++LK P
Sbjct: 42  FRESMMNQMFSLDINSQIGSCMPLAAMRIGTIIHNIEINPGQGGKLVRAAGTSAKLLKEP 101

Query: 112 EGKSRCCLVKLPSREEKFIDAKCRATIGQVSNPGHGAKKLRKAGQSRWLGRRPTVRGVAM 171
              SR  LV++PS  +K ID +CRATIG VSNPGHGAKKLRKAGQSRWLGRRP VRGVAM
Sbjct: 102 T--SRYVLVRMPSGVQKLIDTRCRATIGTVSNPGHGAKKLRKAGQSRWLGRRPVVRGVAM 161

Query: 172 NPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSPKRKR 217
           NPVDHPHGGGEG+SKS GSHGRGS TPWGKPTKCGYKT   KR++
Sbjct: 162 NPVDHPHGGGEGRSKSGGSHGRGSLTPWGKPTKCGYKTGPLKRRK 204

[Close]

BLAST of MELO3C023260 vs. TrEMBL
Match: A0A061ECK1_THECC (50S ribosomal protein L2, putative OS=Theobroma cacao GN=TCM_017084 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 5.6e-69
Identity = 129/172 (75.00%), Postives = 146/172 (84.88%), Query Frame = 1


Query: 45  ARVEGRTFRERMANYMATLDINSQIGSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGTF 104
           A V  ++  E M   +  LDINSQIGSCMPL AMRIGTIIHNIE+NPGQGGKLVR+AGT 
Sbjct: 34  ADVNNQSMIENMKRELLHLDINSQIGSCMPLAAMRIGTIIHNIEVNPGQGGKLVRAAGTS 93

Query: 105 ARILKLPEGKSRCCLVKLPSREEKFIDAKCRATIGQVSNPGHGAKKLRKAGQSRWLGRRP 164
           A+ILK P  KSR CLV++PS  EK ID++CRAT+G VSNP HGAKKLRKAGQSRWLGRRP
Sbjct: 94  AKILKEP--KSRYCLVRMPSGVEKLIDSRCRATVGMVSNPSHGAKKLRKAGQSRWLGRRP 153

Query: 165 TVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSPKRKR 217
           TVRGVAMNP+DHPHGGGEG+SKSSGS+G+ SRTPWGKP KCGYKT S KR++
Sbjct: 154 TVRGVAMNPIDHPHGGGEGRSKSSGSYGKTSRTPWGKPCKCGYKTASSKRRK 203

[Close]

BLAST of MELO3C023260 vs. TrEMBL
Match: A0A067EHM1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027754mg PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.1e-67
Identity = 132/188 (70.21%), Postives = 150/188 (79.79%), Query Frame = 1


Query: 34  QPTSDLLVSDMARVEG---RTFRERMANYMATLDINSQIGSCMPLGAMRIGTIIHNIEIN 93
           Q +   LV D ++ E     T R+++   MA +DINSQIGSCMPL  MRIGTIIHNIE+N
Sbjct: 32  QSSETELVGDPSKQEKPKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVN 91

Query: 94  PGQGGKLVRSAGTFARILKLPEGKSRCCLVKLPSREEKFIDAKCRATIGQVSNPGHGAKK 153
           PGQGGKLVR+AGT A+ILK P   S  CLV+LPS  EK ID +CRATIG VSNP HGAKK
Sbjct: 92  PGQGGKLVRAAGTSAKILKEPT--SSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKK 151

Query: 154 LRKAGQSRWLGRRPTVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTR 213
           LRKAGQSRWLGRRP VRGVAMNPVDHPHGGGEG+SKSSG+HGR S TPWGKP K GYKT 
Sbjct: 152 LRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTA 211

Query: 214 SPKRKRQV 219
           SPK+K+++
Sbjct: 212 SPKKKKKL 217

[Close]

BLAST of MELO3C023260 vs. TrEMBL
Match: V4U0M9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016628mg PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.1e-67
Identity = 132/188 (70.21%), Postives = 150/188 (79.79%), Query Frame = 1


Query: 34  QPTSDLLVSDMARVEG---RTFRERMANYMATLDINSQIGSCMPLGAMRIGTIIHNIEIN 93
           Q +   LV D ++ E     T R+++   MA +DINSQIGSCMPL  MRIGTIIHNIE+N
Sbjct: 32  QSSETELVGDPSKQEKPKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVN 91

Query: 94  PGQGGKLVRSAGTFARILKLPEGKSRCCLVKLPSREEKFIDAKCRATIGQVSNPGHGAKK 153
           PGQGGKLVR+AGT A+ILK P   S  CLV+LPS  EK ID +CRATIG VSNP HGAKK
Sbjct: 92  PGQGGKLVRAAGTSAKILKEPT--SSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKK 151

Query: 154 LRKAGQSRWLGRRPTVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTR 213
           LRKAGQSRWLGRRP VRGVAMNPVDHPHGGGEG+SKSSG+HGR S TPWGKP K GYKT 
Sbjct: 152 LRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNHGRCSLTPWGKPCKSGYKTA 211

Query: 214 SPKRKRQV 219
           SPK+K+++
Sbjct: 212 SPKKKKKL 217

[Close]

BLAST of MELO3C023260 vs. TAIR10
Match: AT2G44065.1 (AT2G44065.1 Ribosomal protein L2 family)

HSP 1 Score: 236.5 bits (602), Expect = 1.6e-62
Identity = 122/199 (61.31%), Postives = 144/199 (72.36%), Query Frame = 1


Query: 20  SRRPVSSPIIQAQEQPTSDLLVSDMARVEGRTFRERMANYMATLDINSQIGSCMPLGAMR 79
           +R   SS +  +  +P      +  A  + ++   +M   M  +DINS IGS MPLG MR
Sbjct: 10  ARASASSSLFNSVIRPAFRNFSTGFADTQNKSLVAQMKEEMLHMDINSMIGSSMPLGMMR 69

Query: 80  IGTIIHNIEINPGQGGKLVRSAGTFARILKLP-EGKSRCCLVKLPSREEKFIDAKCRATI 139
           IGTIIHNIE+NPGQG K+VR+AGT A+ILK P +GK   CL+KLPS + K+I+AKCRATI
Sbjct: 70  IGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGK---CLIKLPSGDTKWINAKCRATI 129

Query: 140 GQVSNPGHGAKKLRKAGQSRWLGRRPTVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTP 199
           G VSNP HG KKL KAGQSRWLG RP VRGVAMNP DHPHGGGEGKSKSSGS GR S +P
Sbjct: 130 GTVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKSKSSGSRGRTSVSP 189

Query: 200 WGKPTKCGYKTRSPKRKRQ 218
           WGKP K GYK+ S K+K++
Sbjct: 190 WGKPCKGGYKSASVKKKKK 205

[Close]

BLAST of MELO3C023260 vs. TAIR10
Match: ATCG00830.1 (ATCG00830.1 ribosomal protein L2)

HSP 1 Score: 136.7 bits (343), Expect = 1.7e-32
Identity = 73/151 (48.34%), Postives = 94/151 (62.25%), Query Frame = 1


Query: 64  DINSQIGSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGTFARILKLPEGKSRCCLVKLP 123
           ++  ++G+ +PL  M +GT IHNIEI  G+GG+L R+AG  A+++   EGKS    +KLP
Sbjct: 119 EVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIA-KEGKS--ATLKLP 178

Query: 124 SREEKFIDAKCRATIGQVSNPGHGAKKLRKAGQSRWLGRRPTVRGVAMNPVDHPHGGGEG 183
           S E + I   C AT+GQV N G   K L +AG   WLG+RP VRGV MNPVDHPHGGGEG
Sbjct: 179 SGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEG 238

Query: 184 KSKSSGSHGRGSRTPWGKPTKCGYKTRSPKR 215
           ++       +   TPWG P   G +TR  K+
Sbjct: 239 RAPIG---RKKPVTPWGYPA-LGRRTRKRKK 262

[Close]

BLAST of MELO3C023260 vs. TAIR10
Match: ATCG01310.1 (ATCG01310.1 ribosomal protein L2)

HSP 1 Score: 136.7 bits (343), Expect = 1.7e-32
Identity = 73/151 (48.34%), Postives = 94/151 (62.25%), Query Frame = 1


Query: 64  DINSQIGSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGTFARILKLPEGKSRCCLVKLP 123
           ++  ++G+ +PL  M +GT IHNIEI  G+GG+L R+AG  A+++   EGKS    +KLP
Sbjct: 119 EVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIA-KEGKS--ATLKLP 178

Query: 124 SREEKFIDAKCRATIGQVSNPGHGAKKLRKAGQSRWLGRRPTVRGVAMNPVDHPHGGGEG 183
           S E + I   C AT+GQV N G   K L +AG   WLG+RP VRGV MNPVDHPHGGGEG
Sbjct: 179 SGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEG 238

Query: 184 KSKSSGSHGRGSRTPWGKPTKCGYKTRSPKR 215
           ++       +   TPWG P   G +TR  K+
Sbjct: 239 RAPIG---RKKPVTPWGYPA-LGRRTRKRKK 262

[Close]

BLAST of MELO3C023260 vs. TAIR10
Match: AT3G51190.1 (AT3G51190.1 Ribosomal protein L2 family)

HSP 1 Score: 96.7 bits (239), Expect = 1.9e-20
Identity = 55/141 (39.01%), Postives = 80/141 (56.74%), Query Frame = 1


Query: 66  NSQIGSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGTFARILKLPEGKSRCCLVKLPSR 125
           N  +G+ +PLG++  G +I N+E++ G  G L R++G +A ++     +S    VKLPS 
Sbjct: 96  NLMVGNVLPLGSIPEGAVICNVELHVGDRGALARASGDYAIVIA-HNPESNTTRVKLPSG 155

Query: 126 EEKFIDAKCRATIGQVSNPGHGAKKLRKAGQS--RWLGRR---PTVRGVAMNPVDHPHGG 185
            +K + + CRA IGQV+  G   K L KAG +  ++  +R   P VRGVAMNPV+HPHGG
Sbjct: 156 SKKILPSACRAMIGQVAGGGRTEKPLLKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGG 215

Query: 186 GEGKSKSSGSHGRGSRTPWGK 202
           G  +     S  R  ++   K
Sbjct: 216 GNHQHIGHASTVRRDKSAGAK 235

[Close]

BLAST of MELO3C023260 vs. TAIR10
Match: AT2G18020.1 (AT2G18020.1 Ribosomal protein L2 family)

HSP 1 Score: 85.5 bits (210), Expect = 4.4e-17
Identity = 51/138 (36.96%), Postives = 75/138 (54.35%), Query Frame = 1


Query: 69  IGSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGTFARILKLPEGKSRCCLVKLPSREEK 128
           +G+ +PL ++  G ++ N+E + G  G L R++G +A ++      S    +KLPS  +K
Sbjct: 98  VGNVLPLRSIPEGAVVCNVEHHVGDRGVLARASGDYAIVIA-HNPDSDTTRIKLPSGSKK 157

Query: 129 FIDAKCRATIGQVSNPGHGAKKLRKAGQS--RWLGRR---PTVRGVAMNPVDHPHGGGEG 188
            + + CRA IGQV+  G   K + KAG +  ++  +R   P VRGVAMNPV+HPHGGG  
Sbjct: 158 IVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNH 217

Query: 189 KSKSSGSHGRGSRTPWGK 202
           +     S  R    P  K
Sbjct: 218 QHIGHASTVRRDAPPGQK 234

[Close]

BLAST of MELO3C023260 vs. NCBI nr
Match: gi|659121966|ref|XP_008460907.1| (PREDICTED: 60S ribosomal protein L2, mitochondrial [Cucumis melo])

HSP 1 Score: 442.2 bits (1136), Expect = 5.3e-121
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1


Query: 1   MAMMRSASAVALRGLRRFSSRRPVSSPIIQAQEQPTSDLLVSDMARVEGRTFRERMANYM 60
           MAMMRSASAVALRGLRRFSSRRPVSSPIIQAQEQPTSDLLVSDMARVEGRTFRERMANYM
Sbjct: 1   MAMMRSASAVALRGLRRFSSRRPVSSPIIQAQEQPTSDLLVSDMARVEGRTFRERMANYM 60

Query: 61  ATLDINSQIGSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGTFARILKLPEGKSRCCLV 120
           ATLDINSQIGSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGTFARILKLPEGKSRCCLV
Sbjct: 61  ATLDINSQIGSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGTFARILKLPEGKSRCCLV 120

Query: 121 KLPSREEKFIDAKCRATIGQVSNPGHGAKKLRKAGQSRWLGRRPTVRGVAMNPVDHPHGG 180
           KLPSREEKFIDAKCRATIGQVSNPGHGAKKLRKAGQSRWLGRRPTVRGVAMNPVDHPHGG
Sbjct: 121 KLPSREEKFIDAKCRATIGQVSNPGHGAKKLRKAGQSRWLGRRPTVRGVAMNPVDHPHGG 180

Query: 181 GEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSPKRKRQV 219
           GEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSPKRKRQV
Sbjct: 181 GEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSPKRKRQV 218

[Close]

BLAST of MELO3C023260 vs. NCBI nr
Match: gi|449459236|ref|XP_004147352.1| (PREDICTED: 60S ribosomal protein L2, mitochondrial [Cucumis sativus])

HSP 1 Score: 397.9 bits (1021), Expect = 1.1e-107
Identity = 203/219 (92.69%), Postives = 203/219 (92.69%), Query Frame = 1


Query: 1   MAMMRSASAVALRGLRRFSSRRPVSSPIIQAQEQPTSDLLVSD-MARVEGRTFRERMANY 60
           MAMMRSASAVALRGLRRFSSRRPVSSPI QA E PTS   VSD MA VEGRTFRERM NY
Sbjct: 1   MAMMRSASAVALRGLRRFSSRRPVSSPINQALELPTS---VSDPMAGVEGRTFRERMTNY 60

Query: 61  MATLDINSQIGSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGTFARILKLPEGKSRCCL 120
           MATLDINSQIGSCMPLG MRIGTIIHNIEINPGQGGKLVRSAGT ARILKLPEGKSRCCL
Sbjct: 61  MATLDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRCCL 120

Query: 121 VKLPSREEKFIDAKCRATIGQVSNPGHGAKKLRKAGQSRWLGRRPTVRGVAMNPVDHPHG 180
           VKLPSREEK IDAKCRATIGQVSNPGHG KKLRKAGQSRWLGRRP VRGVAMNPVDHPHG
Sbjct: 121 VKLPSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRRPKVRGVAMNPVDHPHG 180

Query: 181 GGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSPKRKRQV 219
           GGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRS KRKR V
Sbjct: 181 GGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKRKRPV 216

[Close]

BLAST of MELO3C023260 vs. NCBI nr
Match: gi|700207022|gb|KGN62141.1| (hypothetical protein Csa_2G302080 [Cucumis sativus])

HSP 1 Score: 343.2 bits (879), Expect = 3.4e-91
Identity = 166/175 (94.86%), Postives = 166/175 (94.86%), Query Frame = 1


Query: 44  MARVEGRTFRERMANYMATLDINSQIGSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGT 103
           MA VEGRTFRERM NYMATLDINSQIGSCMPLG MRIGTIIHNIEINPGQGGKLVRSAGT
Sbjct: 1   MAGVEGRTFRERMTNYMATLDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGT 60

Query: 104 FARILKLPEGKSRCCLVKLPSREEKFIDAKCRATIGQVSNPGHGAKKLRKAGQSRWLGRR 163
            ARILKLPEGKSRCCLVKLPSREEK IDAKCRATIGQVSNPGHG KKLRKAGQSRWLGRR
Sbjct: 61  SARILKLPEGKSRCCLVKLPSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRR 120

Query: 164 PTVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSPKRKRQV 219
           P VRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRS KRKR V
Sbjct: 121 PKVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKRKRPV 175

[Close]

BLAST of MELO3C023260 vs. NCBI nr
Match: gi|731391362|ref|XP_010650732.1| (PREDICTED: 60S ribosomal protein L2, mitochondrial [Vitis vinifera])

HSP 1 Score: 269.6 bits (688), Expect = 4.7e-69
Identity = 131/165 (79.39%), Postives = 142/165 (86.06%), Query Frame = 1


Query: 52  FRERMANYMATLDINSQIGSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGTFARILKLP 111
           FRE M N M +LDINSQIGSCMPL AMRIGTIIHNIEINPGQGGKLVR+AGT A++LK P
Sbjct: 42  FRESMMNQMFSLDINSQIGSCMPLAAMRIGTIIHNIEINPGQGGKLVRAAGTSAKLLKEP 101

Query: 112 EGKSRCCLVKLPSREEKFIDAKCRATIGQVSNPGHGAKKLRKAGQSRWLGRRPTVRGVAM 171
              SR  LV++PS  +K ID +CRATIG VSNPGHGAKKLRKAGQSRWLGRRP VRGVAM
Sbjct: 102 T--SRYVLVRMPSGVQKLIDTRCRATIGTVSNPGHGAKKLRKAGQSRWLGRRPVVRGVAM 161

Query: 172 NPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSPKRKR 217
           NPVDHPHGGGEG+SKS GSHGRGS TPWGKPTKCGYKT   KR++
Sbjct: 162 NPVDHPHGGGEGRSKSGGSHGRGSLTPWGKPTKCGYKTGPLKRRK 204

[Close]

BLAST of MELO3C023260 vs. NCBI nr
Match: gi|590646897|ref|XP_007031749.1| (50S ribosomal protein L2, putative [Theobroma cacao])

HSP 1 Score: 268.9 bits (686), Expect = 8.0e-69
Identity = 129/172 (75.00%), Postives = 146/172 (84.88%), Query Frame = 1


Query: 45  ARVEGRTFRERMANYMATLDINSQIGSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGTF 104
           A V  ++  E M   +  LDINSQIGSCMPL AMRIGTIIHNIE+NPGQGGKLVR+AGT 
Sbjct: 34  ADVNNQSMIENMKRELLHLDINSQIGSCMPLAAMRIGTIIHNIEVNPGQGGKLVRAAGTS 93

Query: 105 ARILKLPEGKSRCCLVKLPSREEKFIDAKCRATIGQVSNPGHGAKKLRKAGQSRWLGRRP 164
           A+ILK P  KSR CLV++PS  EK ID++CRAT+G VSNP HGAKKLRKAGQSRWLGRRP
Sbjct: 94  AKILKEP--KSRYCLVRMPSGVEKLIDSRCRATVGMVSNPSHGAKKLRKAGQSRWLGRRP 153

Query: 165 TVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSPKRKR 217
           TVRGVAMNP+DHPHGGGEG+SKSSGS+G+ SRTPWGKP KCGYKT S KR++
Sbjct: 154 TVRGVAMNPIDHPHGGGEGRSKSSGSYGKTSRTPWGKPCKCGYKTASSKRRK 203

The following BLAST results are available for this feature:

BLAST of MELO3C023260 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RM02_ORYSA	2.2e-50	61.54	60S ribosomal protein L2, mitochondrial OS=Oryza sativa GN=RPL2 PE=3 SV=1	[more]
RM02_ORYSI	2.2e-50	61.54	60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. indica GN=RPL2 PE...	[more]
RM02_ORYSJ	2.2e-50	61.54	60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. japonica GN=RPL2 ...	[more]
RM02_MARPO	5.1e-47	62.59	60S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha GN=RPL2 PE=3 SV...	[more]
RL2_GRABC	1.7e-39	57.93	50S ribosomal protein L2 OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / C...	[more]

BLAST of MELO3C023260 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ76_CUCSA	2.3e-91	94.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302080 PE=4 SV=1	[more]
D7T2J7_VITVI	3.3e-69	79.39	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0094g01100 PE=4 SV=...	[more]
A0A061ECK1_THECC	5.6e-69	75.00	50S ribosomal protein L2, putative OS=Theobroma cacao GN=TCM_017084 PE=4 SV=1	[more]
A0A067EHM1_CITSI	1.1e-67	70.21	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027754mg PE=4 SV=1	[more]
V4U0M9_9ROSI	1.1e-67	70.21	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016628mg PE=4 SV=1	[more]

BLAST of MELO3C023260 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44065.1	1.6e-62	61.31	Ribosomal protein L2 family	[more]
ATCG00830.1	1.7e-32	48.34	ATCG00830.1 ribosomal protein L2	[more]
ATCG01310.1	1.7e-32	48.34	ATCG01310.1 ribosomal protein L2	[more]
AT3G51190.1	1.9e-20	39.01	Ribosomal protein L2 family	[more]
AT2G18020.1	4.4e-17	36.96	Ribosomal protein L2 family	[more]

BLAST of MELO3C023260 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121966\|ref\|XP_008460907.1\|	5.3e-121	100.00	PREDICTED: 60S ribosomal protein L2, mitochondrial [Cucumis melo]	[more]
gi\|449459236\|ref\|XP_004147352.1\|	1.1e-107	92.69	PREDICTED: 60S ribosomal protein L2, mitochondrial [Cucumis sativus]	[more]
gi\|700207022\|gb\|KGN62141.1\|	3.4e-91	94.86	hypothetical protein Csa_2G302080 [Cucumis sativus]	[more]
gi\|731391362\|ref\|XP_010650732.1\|	4.7e-69	79.39	PREDICTED: 60S ribosomal protein L2, mitochondrial [Vitis vinifera]	[more]
gi\|590646897\|ref\|XP_007031749.1\|	8.0e-69	75.00	50S ribosomal protein L2, putative [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002171	Ribosomal_L2
IPR005880	Ribosomal_L2_bac/org-type
IPR008991	Translation_prot_SH3-like_sf
IPR014722	Rib_L2_dom2
IPR014726	Ribosomal_L2_dom3
IPR022669	Ribosomal_L2_C
IPR022671	Ribosomal_L2_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome
GO:0003723	RNA binding
GO:0016740	transferase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome
GO:0015934	large ribosomal subunit

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006354	DNA-templated transcription, elongation
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0032543	mitochondrial translation
biological_process	GO:0009853	photorespiration
biological_process	GO:0006364	rRNA processing
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000956	nuclear-transcribed mRNA catabolic process
cellular_component	GO:0030687	preribosome, large subunit precursor
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0070180	large ribosomal subunit rRNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023260T1	MELO3C023260T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 62..216 score: 3.7
IPR005880	Ribosomal protein L2, bacterial/organellar-type	TIGRFAMs	TIGR01171	TIGR01171	coord: 60..215 score: 1.2
IPR008991	Translation protein SH3-like domain	unknown	SSF50104	Translation proteins SH3-like domain	coord: 69..214 score: 9.89
IPR014722	Ribosomal protein L2 domain 2	GENE3D	G3DSA:2.30.30.30		coord: 65..141 score: 1.2
IPR014726	Ribosomal protein L2, domain 3	GENE3D	G3DSA:4.10.950.10		coord: 142..216 score: 1.5
IPR022669	Ribosomal protein L2, C-terminal	PFAM	PF03947	Ribosomal_L2_C	coord: 68..200 score: 2.5
IPR022669	Ribosomal protein L2, C-terminal	SMART	SM01382	Ribosomal_L2_C_2	coord: 67..202 score: 3.6
IPR022671	Ribosomal protein L2, conserved site	PROSITE	PS00467	RIBOSOMAL_L2	coord: 164..175 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C023260	Csa2G302080	Cucumber (Chinese Long) v2	cumeB100
MELO3C023260	Cla007796	Watermelon (97103) v1	mewmB123
MELO3C023260	ClCG02G000640	Watermelon (Charleston Gray)	mewcgB091
MELO3C023260	Cla97C02G026910	Watermelon (97103) v2	mewmbB093
MELO3C023260	Bhi10G001904	Wax gourd	mewgoB118
MELO3C023260	CSPI02G15580	Wild cucumber (PI 183967)	cpimeB100
MELO3C023260	Cucsa.250010	Cucumber (Gy14) v1	cgymeB424
MELO3C023260	CmaCh20G010690	Cucurbita maxima (Rimu)	cmameB491
MELO3C023260	CmaCh02G006200	Cucurbita maxima (Rimu)	cmameB550
MELO3C023260	CmoCh02G006240	Cucurbita moschata (Rifu)	cmomeB540
MELO3C023260	CmoCh20G010770	Cucurbita moschata (Rifu)	cmomeB486
MELO3C023260	Lsi10G007120	Bottle gourd (USVL1VR-Ls)	lsimeB056
MELO3C023260	Cp4.1LG16g00760	Cucurbita pepo (Zucchini)	cpemeB261
MELO3C023260	Cp4.1LG05g10680	Cucurbita pepo (Zucchini)	cpemeB657
MELO3C023260	CsGy2G015550	Cucumber (Gy14) v2	cgybmeB086
MELO3C023260	Carg11685	Silver-seed gourd	carmeB1026
MELO3C023260	Carg24325	Silver-seed gourd	carmeB0713
MELO3C023260	CsaV3_2G018130	Cucumber (Chinese Long) v3	cucmeB104

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C023260	Cucurbita moschata (Rifu)	cmomeB492
MELO3C023260	Cucurbita pepo (Zucchini)	cpemeB268