CsGy2G015550 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G015550
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	50S ribosomal protein L2, putative
Location	Chr2 : 15491734 .. 15494857 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCCAAACTTCTGGATTCTGGATTCTGGATTCATTCCCTTTCGCATTGCTTCAATCCGAAGTGTTATGGCTATGATGAGATCCGCCTCCGCGGTTGCTCTTCGTGGCCTCAGGAGGTTCTCTTCCCGAAGGCCAGTTTCTTCTCCAATCAATCAGGCACTGGAACTACCCACCTCCGTTTCTGGCAAGTCTCTCTTCCCATTTCTGTTACTTTCTTCGTCTTTTCATTTTGAGTTCTAAGATTTCCCTGTGGTTGGAATGTTTCTCTCCCCTCTGGTGTATTGCTTTTGCTTACTTATTCTTGTTTTTCGTTTTTTGTATTTGCAACTTTCTCAGTACTGTCTGTCTTCAACGGGGGTTTTATTGATTGATTGATTGGTTCTCATCATTCGGTGATATTTGTTGATTTATAACATCAATGGAGATTGAATGCTTTCTTTTTGTTGTTTGGATTTGATTGTTTTTACATTGGGAGAAAATGAGAAGCTTTTGACTGTGATATTAGGAAGGGATTTTAGAATTTTAGAAGTTTTTGGTTCTCACCAATGAATAATGGCAATCTTTCTACCTGAGGCTGTGGCCTCATAGGTAAAGTCATTACAAACAACTGTAAAGCTTGCTCCTTAATCTGCAGCTTCTCTCTTCTCATAAATCAACTGTCCTGAATAAATAAATCACCTATTTCAAATAAGACTGATGTTATTTGGCTCAACTTCATTTGAGACTTTCTTTGGTGCAATTGGATTGAAAGAAACTAAAAATTTGTTTTCTGGAAAAGACATAGATTTCTCTTCTTTTATGGACATGTCGCTTGGTGTAGGCTTAAAAATCTCTTTTGTTACTATTCCTTTTAATTGTAGTGTCTTGTTCTTCCCCCCTCTTTTTATATTTCATTGTTATTATGAAATATTTCCAATTAAAAAGAATAGTAGTGCTTACCCCATTCCTAAGCCTTAAAACACTTGAGAACTAAGACCAGATATATTTCCTTTGTAGAAATTACTTAAATATTCTTTGTATCATGACAATCTCGACCCAAAGCTTGAAGACGATCACCAATTTAAGAAAAAAAAGATTGATTATATTAGTATTGTAGAATGAAAATGGACTTGAAGGAGAACACAAAAAAAGAAGCATAACTCTTTGTGAAGTCCCATCTAACAACCCATTCAGGCTTTTTTTCTGTATTCTCTGGTTCCTTTCAGACCCAATACTTCAAAGAATACTCTGACCACATTTATTCACCGTAGTTCAACTTTTTTCTTCAACTTCATAACACATAGTTGGAAGTTTCTTTTTTGAAAAACCTATGTTGAAAGTTATTCTCAAGGTTTTATTGAACACCCATGCCAAAACGAAAGCTGTTCTCAAATCATACCACTTTAAGCACAGTGAATAGATAAGTGAAAGTTATCTTCACCTACTAAAAACACTGGCTGAACGTGGCAATTCAACATCAAAGCAATGTACTTTCACCTGATTGTTGACTGTGCTGAGTGTATGCAAATGTGTGAATCACATGGAAGTACTGATTTTTGGGGATTTTTTTTTATCCCTGAACTTATTAAGATTCATTGATTTGCACCATAAATTTTCAATTTCAACTAATCAAACTCTAGACTTGGACACTTATCTTCACTGATTTAACAGAATCCGAGTTAAAATTCTCTGAAAACAAGCTAAGTTCAATAATAATAATAATAAAAATAAAAGAAAAATCTTAAGCCATTTGCAAATTTCAACCCAATCAATGCACAAGATTGATTGTCGTATCTTTTTCATCGAATCAATCTTCTAAAATGGCCAAATTTTTCTCGGTGTAACTATGGAAACACTTCAGGCTTTGGTTGTTTCATGAATATAATTGCAAGGTCTTAGAATGGAATGACTTTGACTATCGATTCATTAGTAAAAAACCTTCGCCAATTCTTCTTCTTTGGATCTCCTACCTTTTTCTAGAACAGGAAAGACTAAAGAGTGCTCATTGTCATTCTTTTTTCTTTTATTATTTTTATTGCTGCATGATCACTTGAAGAATGACGAAACCTGGAAAGATCAAAGATTACTGAATTCTTTTTTTAATATTTCATTCAACAGCTTAAAGTTAAAAGCTTCTTTTTCTCATATGGATCAGTTGGTAGAAAATGGAAATATGTTCTCATTTGCTCAGTTTGCTTAGGGTTTTCATACTAATTTTGTAAAAGCTGTATTTTACTGTTTATTTTAATTTACCTTTTGAATTATTGATGTCGGGCGAAGTAGACAATTCTAAAACTTGGAGCTTGTTTGGAATGACTTCTAGAGTGTTAAAAAATGTGTTTCTACGCACTTAGAAAGAAAATATTTTTTACACTTAAAAATGTGTTTCAAAGCTTCAACCTTGAATTGAATTGAATTATCTGCTGATGGAAAAAAAATATTAGTGGTTTATTTTCTTTAAAGTAAAATATTAGTGAGCTTTTTAGTTTGACATTTTATCAATTTATCCTACAATTAATATCTACTTCTTATGTCATATTTTTCCTTAATATATTAGAATTCTTGTTCTAGGATCATCGTGTTAAGAATACTTTTATTGTTGTTTTTCACAGATCCAATGGCTGGGGTAGAGGGTCGGACGTTCCGTGAACGAATGACAAATTACATGGCTACTCTTGACATCAATTCACAAATTGGAAGCTGCATGCCTCTTGGTTTAATGCGCATTGGTACGATTATCCACAATATCGAGATAAACCCAGGCCAAGGCGGGAAGCTGGTGCGATCAGCAGGAACATCTGCAAGGATATTAAAACTGCCAGAGGGAAAGTCAAGATGCTGCTTGGTGAAACTTCCTTCACGTGAAGAGAAGTTAATTGATGCTAAGTGCAGGGCAACAATTGGTCAGGTATCTAACCCGGGTCATGGAACCAAGAAACTGAGAAAGGCAGGGCAGAGCCGATGGTTGGGTCGACGACCGAAGGTTCGAGGAGTGGCGATGAACCCGGTGGATCATCCTCATGGAGGAGGTGAGGGTAAGAGCAAGAGTAGTGGGAGCCATGGAAGGGGGTCTCGGACACCTTGGGGTAAGCCAACCAAGTGTGGGTACAAGACTCGATCTGCCAAGCGCAAAAGACCAGTGTAA

mRNA sequence

AACCCAAACTTCTGGATTCTGGATTCTGGATTCATTCCCTTTCGCATTGCTTCAATCCGAAGTGTTATGGCTATGATGAGATCCGCCTCCGCGGTTGCTCTTCGTGGCCTCAGGAGGTTCTCTTCCCGAAGGCCAGTTTCTTCTCCAATCAATCAGGCACTGGAACTACCCACCTCCGTTTCTGGCAAAAATTACTTAAATATTCTTTATCCAATGGCTGGGGTAGAGGGTCGGACGTTCCGTGAACGAATGACAAATTACATGGCTACTCTTGACATCAATTCACAAATTGGAAGCTGCATGCCTCTTGGTTTAATGCGCATTGGTACGATTATCCACAATATCGAGATAAACCCAGGCCAAGGCGGGAAGCTGGTGCGATCAGCAGGAACATCTGCAAGGATATTAAAACTGCCAGAGGGAAAGTCAAGATGCTGCTTGGTGAAACTTCCTTCACGTGAAGAGAAGTTAATTGATGCTAAGTGCAGGGCAACAATTGGTCAGGTATCTAACCCGGGTCATGGAACCAAGAAACTGAGAAAGGCAGGGCAGAGCCGATGGTTGGGTCGACGACCGAAGGTTCGAGGAGTGGCGATGAACCCGGTGGATCATCCTCATGGAGGAGGTGAGGGTAAGAGCAAGAGTAGTGGGAGCCATGGAAGGGGGTCTCGGACACCTTGGGGTAAGCCAACCAAGTGTGGGTACAAGACTCGATCTGCCAAGCGCAAAAGACCAGTGTAA

Coding sequence (CDS)

AACCCAAACTTCTGGATTCTGGATTCTGGATTCATTCCCTTTCGCATTGCTTCAATCCGAAGTGTTATGGCTATGATGAGATCCGCCTCCGCGGTTGCTCTTCGTGGCCTCAGGAGGTTCTCTTCCCGAAGGCCAGTTTCTTCTCCAATCAATCAGGCACTGGAACTACCCACCTCCGTTTCTGGCAAAAATTACTTAAATATTCTTTATCCAATGGCTGGGGTAGAGGGTCGGACGTTCCGTGAACGAATGACAAATTACATGGCTACTCTTGACATCAATTCACAAATTGGAAGCTGCATGCCTCTTGGTTTAATGCGCATTGGTACGATTATCCACAATATCGAGATAAACCCAGGCCAAGGCGGGAAGCTGGTGCGATCAGCAGGAACATCTGCAAGGATATTAAAACTGCCAGAGGGAAAGTCAAGATGCTGCTTGGTGAAACTTCCTTCACGTGAAGAGAAGTTAATTGATGCTAAGTGCAGGGCAACAATTGGTCAGGTATCTAACCCGGGTCATGGAACCAAGAAACTGAGAAAGGCAGGGCAGAGCCGATGGTTGGGTCGACGACCGAAGGTTCGAGGAGTGGCGATGAACCCGGTGGATCATCCTCATGGAGGAGGTGAGGGTAAGAGCAAGAGTAGTGGGAGCCATGGAAGGGGGTCTCGGACACCTTGGGGTAAGCCAACCAAGTGTGGGTACAAGACTCGATCTGCCAAGCGCAAAAGACCAGTGTAA

Protein sequence

NPNFWILDSGFIPFRIASIRSVMAMMRSASAVALRGLRRFSSRRPVSSPINQALELPTSVSGKNYLNILYPMAGVEGRTFRERMTNYMATLDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRCCLVKLPSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRRPKVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKRKRPV

Homology

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BLAST of CsGy2G015550 vs. NCBI nr
Match: XP_004147352.1 (PREDICTED: 60S ribosomal protein L2, mitochondrial [Cucumis sativus])

HSP 1 Score: 419.1 bits (1076), Expect = 1.1e-113
Identity = 215/224 (95.98%), Postives = 215/224 (95.98%), Query Frame = 0


Query: 23  MAMMRSASAVALRGLRRFSSRRPVSSPINQALELPTSVSGKNYLNILYPMAGVEGRTFRE 82
           MAMMRSASAVALRGLRRFSSRRPVSSPINQALELPTSVS         PMAGVEGRTFRE
Sbjct: 1   MAMMRSASAVALRGLRRFSSRRPVSSPINQALELPTSVSD--------PMAGVEGRTFRE 60

Query: 83  RMTNYMATLDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGK 142
           RMTNYMATLDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGK
Sbjct: 61  RMTNYMATLDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGK 120

Query: 143 SRCCLVKLPSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRRPKVRGVAMNPV 202
           SRCCLVKLPSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRRPKVRGVAMNPV
Sbjct: 121 SRCCLVKLPSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRRPKVRGVAMNPV 180

Query: 203 DHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKRKRPV 247
           DHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKRKRPV
Sbjct: 181 DHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKRKRPV 216

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BLAST of CsGy2G015550 vs. NCBI nr
Match: XP_008460907.1 (PREDICTED: 60S ribosomal protein L2, mitochondrial [Cucumis melo])

HSP 1 Score: 384.4 bits (986), Expect = 2.9e-103
Identity = 200/224 (89.29%), Postives = 202/224 (90.18%), Query Frame = 0


Query: 23  MAMMRSASAVALRGLRRFSSRRPVSSPINQALELPTSVSGKNYLNILYPMAGVEGRTFRE 82
           MAMMRSASAVALRGLRRFSSRRPVSSPI QA E PTS        ++  MA VEGRTFRE
Sbjct: 1   MAMMRSASAVALRGLRRFSSRRPVSSPIIQAQEQPTSDL------LVSDMARVEGRTFRE 60

Query: 83  RMTNYMATLDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGK 142
           RM NYMATLDINSQIGSCMPLG MRIGTIIHNIEINPGQGGKLVRSAGT ARILKLPEGK
Sbjct: 61  RMANYMATLDINSQIGSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGTFARILKLPEGK 120

Query: 143 SRCCLVKLPSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRRPKVRGVAMNPV 202
           SRCCLVKLPSREEK IDAKCRATIGQVSNPGHG KKLRKAGQSRWLGRRP VRGVAMNPV
Sbjct: 121 SRCCLVKLPSREEKFIDAKCRATIGQVSNPGHGAKKLRKAGQSRWLGRRPTVRGVAMNPV 180

Query: 203 DHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKRKRPV 247
           DHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRS KRKR V
Sbjct: 181 DHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSPKRKRQV 218

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BLAST of CsGy2G015550 vs. NCBI nr
Match: KGN62141.1 (hypothetical protein Csa_2G302080 [Cucumis sativus])

HSP 1 Score: 355.9 bits (912), Expect = 1.1e-94
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 72  MAGVEGRTFRERMTNYMATLDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGT 131
           MAGVEGRTFRERMTNYMATLDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGT
Sbjct: 1   MAGVEGRTFRERMTNYMATLDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGT 60

Query: 132 SARILKLPEGKSRCCLVKLPSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRR 191
           SARILKLPEGKSRCCLVKLPSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRR
Sbjct: 61  SARILKLPEGKSRCCLVKLPSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRR 120

Query: 192 PKVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKRKRPV 247
           PKVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKRKRPV
Sbjct: 121 PKVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKRKRPV 175

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BLAST of CsGy2G015550 vs. NCBI nr
Match: XP_022971723.1 (uncharacterized protein LOC111470392 [Cucurbita maxima])

HSP 1 Score: 313.9 bits (803), Expect = 4.8e-82
Identity = 166/219 (75.80%), Postives = 183/219 (83.56%), Query Frame = 0


Query: 26  MRSASAVALRGLRRFSSRRPVSSPINQALELPTSVSGKNYLNILYPMAGVEGRTFRERMT 85
           M+SA++VALRGLR FSSR  +S+PIN+    PTS        ++  +AG  GRTFRERMT
Sbjct: 3   MKSAASVALRGLRSFSSRSSISAPINKE---PTSDL------LVSDIAGTYGRTFRERMT 62

Query: 86  NYMATLDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRC 145
           NYMATLDINSQIGSCMPL  MRIGTIIHNI +NPGQGGKLVRSAGT A+ILK P   SR 
Sbjct: 63  NYMATLDINSQIGSCMPLSAMRIGTIIHNIGMNPGQGGKLVRSAGTCAKILKEP--TSRY 122

Query: 146 CLVKLPSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRRPKVRGVAMNPVDHP 205
           CLV+LPS  EKLID+KCRATIGQVSNP HGT+KLRKAGQSRWLGRRP VRGVAMNPVDHP
Sbjct: 123 CLVRLPSGTEKLIDSKCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHP 182

Query: 206 HGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKRKR 245
           HGGGEG+SKSSGS G+GSRTPWGKPTKCGYKT   KRK+
Sbjct: 183 HGGGEGRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 210

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BLAST of CsGy2G015550 vs. NCBI nr
Match: XP_023512394.1 (uncharacterized protein LOC111777160 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312.4 bits (799), Expect = 1.4e-81
Identity = 164/219 (74.89%), Postives = 180/219 (82.19%), Query Frame = 0


Query: 26  MRSASAVALRGLRRFSSRRPVSSPINQALELPTSVSGKNYLNILYPMAGVEGRTFRERMT 85
           M+SA++VALRGLR FSSR  +S+PIN+       VS          +AG  GRT RERMT
Sbjct: 3   MKSAASVALRGLRSFSSRSSISAPINKDPNADLLVS---------DIAGTYGRTLRERMT 62

Query: 86  NYMATLDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRC 145
           NYMATLDINSQIGSCMPL  MRIGTIIHNIE+NPGQGGKLVR+AGT A+ILK P   SR 
Sbjct: 63  NYMATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRAAGTCAKILKEP--TSRY 122

Query: 146 CLVKLPSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRRPKVRGVAMNPVDHP 205
           CLV+LPS  EKLID+KCRATIGQVSNP HGT+KLRKAGQSRWLGRRP VRGVAMNPVDHP
Sbjct: 123 CLVRLPSGTEKLIDSKCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHP 182

Query: 206 HGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKRKR 245
           HGGGEG+SKSSGS G+GSRTPWGKPTKCGYKT   KRK+
Sbjct: 183 HGGGEGRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 210

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BLAST of CsGy2G015550 vs. TAIR10
Match: AT2G44065.1 (Ribosomal protein L2 family)

HSP 1 Score: 227.6 bits (579), Expect = 8.1e-60
Identity = 120/187 (64.17%), Postives = 140/187 (74.87%), Query Frame = 0


Query: 59  SVSGKNYLNILYPMAGVEGRTFRERMTNYMATLDINSQIGSCMPLGLMRIGTIIHNIEIN 118
           SV    + N     A  + ++   +M   M  +DINS IGS MPLG+MRIGTIIHNIE+N
Sbjct: 21  SVIRPAFRNFSTGFADTQNKSLVAQMKEEMLHMDINSMIGSSMPLGMMRIGTIIHNIEMN 80

Query: 119 PGQGGKLVRSAGTSARILKLP-EGKSRCCLVKLPSREEKLIDAKCRATIGQVSNPGHGTK 178
           PGQG K+VR+AGT+A+ILK P +GK   CL+KLPS + K I+AKCRATIG VSNP HGTK
Sbjct: 81  PGQGAKMVRAAGTNAKILKEPAKGK---CLIKLPSGDTKWINAKCRATIGTVSNPSHGTK 140

Query: 179 KLRKAGQSRWLGRRPKVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKT 238
           KL KAGQSRWLG RPKVRGVAMNP DHPHGGGEGK   SGS GR S +PWGKP K GYK+
Sbjct: 141 KLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKXXXSGSRGRTSVSPWGKPCKGGYKS 200

Query: 239 RSAKRKR 245
            S K+K+
Sbjct: 201 ASVKKKK 204

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BLAST of CsGy2G015550 vs. TAIR10
Match: ATCG00830.1 (ribosomal protein L2)

HSP 1 Score: 133.7 bits (335), Expect = 1.6e-31
Identity = 79/175 (45.14%), Postives = 106/175 (60.57%), Query Frame = 0


Query: 68  ILYPMAGVEGRTFRERMTNYMATLDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVR 127
           IL+P   + G T        ++  ++  ++G+ +PL  M +GT IHNIEI  G+GG+L R
Sbjct: 102 ILHPRGAIIGDTI-------VSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLAR 161

Query: 128 SAGTSARILKLPEGKSRCCLVKLPSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRW 187
           +AG  A+++   EGKS    +KLPS E +LI   C AT+GQV N G   K L +AG   W
Sbjct: 162 AAGAVAKLI-AKEGKS--ATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCW 221

Query: 188 LGRRPKVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKR 243
           LG+RP VRGV MNPVDHPHGGGEG++       +   TPWG P   G +TR  K+
Sbjct: 222 LGKRPVVRGVVMNPVDHPHGGGEGRAPIG---RKKPVTPWGYPA-LGRRTRKRKK 262

[Close]

BLAST of CsGy2G015550 vs. TAIR10
Match: ATCG01310.1 (ribosomal protein L2)

HSP 1 Score: 133.7 bits (335), Expect = 1.6e-31
Identity = 79/175 (45.14%), Postives = 106/175 (60.57%), Query Frame = 0


Query: 68  ILYPMAGVEGRTFRERMTNYMATLDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVR 127
           IL+P   + G T        ++  ++  ++G+ +PL  M +GT IHNIEI  G+GG+L R
Sbjct: 102 ILHPRGAIIGDTI-------VSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLAR 161

Query: 128 SAGTSARILKLPEGKSRCCLVKLPSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRW 187
           +AG  A+++   EGKS    +KLPS E +LI   C AT+GQV N G   K L +AG   W
Sbjct: 162 AAGAVAKLI-AKEGKS--ATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCW 221

Query: 188 LGRRPKVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKR 243
           LG+RP VRGV MNPVDHPHGGGEG++       +   TPWG P   G +TR  K+
Sbjct: 222 LGKRPVVRGVVMNPVDHPHGGGEGRAPIG---RKKPVTPWGYPA-LGRRTRKRKK 262

[Close]

BLAST of CsGy2G015550 vs. TAIR10
Match: AT3G51190.1 (Ribosomal protein L2 family)

HSP 1 Score: 87.8 bits (216), Expect = 1.0e-17
Identity = 56/141 (39.72%), Postives = 81/141 (57.45%), Query Frame = 0


Query: 94  NSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRCCLVKLPSR 153
           N  +G+ +PLG +  G +I N+E++ G  G L R++G  A I+     +S    VKLPS 
Sbjct: 96  NLMVGNVLPLGSIPEGAVICNVELHVGDRGALARASGDYA-IVIAHNPESNTTRVKLPSG 155

Query: 154 EEKLIDAKCRATIGQVSNPGHGTKKLRKAGQS--RWLGRR---PKVRGVAMNPVDHPHGG 213
            +K++ + CRA IGQV+  G   K L KAG +  ++  +R   P VRGVAMNPV+HPHGG
Sbjct: 156 SKKILPSACRAMIGQVAGGGRTEKPLLKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGG 215

Query: 214 GEGKSKSSGSHGRGSRTPWGK 230
           G  +     S  R  ++   K
Sbjct: 216 GNHQHIGHASTVRRDKSAGAK 235

[Close]

BLAST of CsGy2G015550 vs. TAIR10
Match: AT2G18020.1 (Ribosomal protein L2 family)

HSP 1 Score: 79.3 bits (194), Expect = 3.6e-15
Identity = 53/138 (38.41%), Postives = 77/138 (55.80%), Query Frame = 0


Query: 97  IGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRCCLVKLPSREEK 156
           +G+ +PL  +  G ++ N+E + G  G L R++G  A I+      S    +KLPS  +K
Sbjct: 98  VGNVLPLRSIPEGAVVCNVEHHVGDRGVLARASGDYA-IVIAHNPDSDTTRIKLPSGSKK 157

Query: 157 LIDAKCRATIGQVSNPGHGTKKLRKAGQS--RWLGRR---PKVRGVAMNPVDHPHGGGEG 216
           ++ + CRA IGQV+  G   K + KAG +  ++  +R   PKVRGVAMNPV+HPHGGG  
Sbjct: 158 IVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNH 217

Query: 217 KSKSSGSHGRGSRTPWGK 230
           +     S  R    P  K
Sbjct: 218 QHIGHASTVRRDAPPGQK 234

[Close]

BLAST of CsGy2G015550 vs. Swiss-Prot
Match: sp|P0C8K6|RM02_ORYSA (60S ribosomal protein L2, mitochondrial OS=Oryza sativa OX=4530 GN=RPL2 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.4e-47
Identity = 96/156 (61.54%), Postives = 120/156 (76.92%), Query Frame = 0


Query: 91  LDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRCCLVKL 150
           LD+NS++G+ +PL  +R+GT +H+IE +PGQG KL R+AGT A+I+K P  +   CLV+L
Sbjct: 354 LDLNSKVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQ---CLVRL 413

Query: 151 PSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRRPKVRGVAMNPVDHPHGGGE 210
           PS  EKLID++CRATIG VSNP HG +KLRKAGQSRW GRRP VRGVAMNPVDHPHGGGE
Sbjct: 414 PSGVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPHGGGE 473

Query: 211 GKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKRKRPV 247
           G++K     GR S +PWGKPTK G++      KR +
Sbjct: 474 GRTKG----GRPSVSPWGKPTKAGFRAGVGVGKRRI 502

[Close]

BLAST of CsGy2G015550 vs. Swiss-Prot
Match: sp|Q2F969|RM02_ORYSI (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=RPL2 PE=3 SV=2)

HSP 1 Score: 189.9 bits (481), Expect = 3.4e-47
Identity = 96/156 (61.54%), Postives = 120/156 (76.92%), Query Frame = 0


Query: 91  LDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRCCLVKL 150
           LD+NS++G+ +PL  +R+GT +H+IE +PGQG KL R+AGT A+I+K P  +   CLV+L
Sbjct: 354 LDLNSKVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQ---CLVRL 413

Query: 151 PSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRRPKVRGVAMNPVDHPHGGGE 210
           PS  EKLID++CRATIG VSNP HG +KLRKAGQSRW GRRP VRGVAMNPVDHPHGGGE
Sbjct: 414 PSGVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPHGGGE 473

Query: 211 GKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKRKRPV 247
           G++K     GR S +PWGKPTK G++      KR +
Sbjct: 474 GRTKG----GRPSVSPWGKPTKAGFRAGVGVGKRRI 502

[Close]

BLAST of CsGy2G015550 vs. Swiss-Prot
Match: sp|P92812|RM02_ORYSJ (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=RPL2 PE=2 SV=2)

HSP 1 Score: 189.9 bits (481), Expect = 3.4e-47
Identity = 96/156 (61.54%), Postives = 120/156 (76.92%), Query Frame = 0


Query: 91  LDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRCCLVKL 150
           LD+NS++G+ +PL  +R+GT +H+IE +PGQG KL R+AGT A+I+K P  +   CLV+L
Sbjct: 354 LDLNSKVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQ---CLVRL 413

Query: 151 PSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRRPKVRGVAMNPVDHPHGGGE 210
           PS  EKLID++CRATIG VSNP HG +KLRKAGQSRW GRRP VRGVAMNPVDHPHGGGE
Sbjct: 414 PSGVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPHGGGE 473

Query: 211 GKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKRKRPV 247
           G++K     GR S +PWGKPTK G++      KR +
Sbjct: 474 GRTKG----GRPSVSPWGKPTKAGFRAGVGVGKRRI 502

[Close]

BLAST of CsGy2G015550 vs. Swiss-Prot
Match: sp|P26859|RM02_MARPO (60S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL2 PE=3 SV=2)

HSP 1 Score: 179.9 bits (455), Expect = 3.5e-44
Identity = 92/147 (62.59%), Postives = 113/147 (76.87%), Query Frame = 0


Query: 97  IGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRCCLVKLPSREEK 156
           +G+C+PL  + IGT +HNIE NPGQG KL R+AGT A+I++  E   + C+V+LPS  +K
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQ-CIVRLPSGVDK 418

Query: 157 LIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRRPKVRGVAMNPVDHPHGGGEGKSKSS 216
           LID++CRATIG VSN  HG +K  KAGQSRWLGRRP VRGVAMNPVDHPHGGGEG++K  
Sbjct: 419 LIDSRCRATIGIVSNLNHGKRKFNKAGQSRWLGRRPIVRGVAMNPVDHPHGGGEGRTKG- 478

Query: 217 GSHGRGSRTPWGKPTKCGYKTRSAKRK 244
              GR S +PWGKPTK G+KT   KR+
Sbjct: 479 ---GRPSVSPWGKPTKGGFKTVVRKRR 500

[Close]

BLAST of CsGy2G015550 vs. Swiss-Prot
Match: sp|Q0BUP7|RL2_GRABC (50S ribosomal protein L2 OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) OX=391165 GN=rplB PE=3 SV=2)

HSP 1 Score: 155.6 bits (392), Expect = 7.1e-37
Identity = 83/145 (57.24%), Postives = 105/145 (72.41%), Query Frame = 0


Query: 98  GSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRCCLVKLPSREEKL 157
           G+ MPLG + +GTIIHNIE+ PG GGK+ RSAGT A+++    G ++   +KL S E ++
Sbjct: 127 GNAMPLGAIPVGTIIHNIEMKPGAGGKIARSAGTYAQLVGKDAGYAQ---IKLMSGELRV 186

Query: 158 IDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRRPKVRGVAMNPVDHPHGGGEGKSKSSG 217
           + A+C AT+G VSNP +    + KAG+SRWLGRRP  RGV MNPVDHPHGGGEG++    
Sbjct: 187 VRAECYATVGAVSNPDNSNIHIGKAGRSRWLGRRPHNRGVVMNPVDHPHGGGEGRT---- 246

Query: 218 SHGRGSRTPWGKPTKCGYKTRSAKR 243
           S GR   TPWGKPTK GYKTR+ KR
Sbjct: 247 SGGRHPVTPWGKPTK-GYKTRTNKR 263

[Close]

BLAST of CsGy2G015550 vs. TrEMBL
Match: tr|A0A1S3CEQ1|A0A1S3CEQ1_CUCME (60S ribosomal protein L2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499648 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 1.9e-103
Identity = 200/224 (89.29%), Postives = 202/224 (90.18%), Query Frame = 0


Query: 23  MAMMRSASAVALRGLRRFSSRRPVSSPINQALELPTSVSGKNYLNILYPMAGVEGRTFRE 82
           MAMMRSASAVALRGLRRFSSRRPVSSPI QA E PTS        ++  MA VEGRTFRE
Sbjct: 1   MAMMRSASAVALRGLRRFSSRRPVSSPIIQAQEQPTSDL------LVSDMARVEGRTFRE 60

Query: 83  RMTNYMATLDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGK 142
           RM NYMATLDINSQIGSCMPLG MRIGTIIHNIEINPGQGGKLVRSAGT ARILKLPEGK
Sbjct: 61  RMANYMATLDINSQIGSCMPLGAMRIGTIIHNIEINPGQGGKLVRSAGTFARILKLPEGK 120

Query: 143 SRCCLVKLPSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRRPKVRGVAMNPV 202
           SRCCLVKLPSREEK IDAKCRATIGQVSNPGHG KKLRKAGQSRWLGRRP VRGVAMNPV
Sbjct: 121 SRCCLVKLPSREEKFIDAKCRATIGQVSNPGHGAKKLRKAGQSRWLGRRPTVRGVAMNPV 180

Query: 203 DHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKRKRPV 247
           DHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRS KRKR V
Sbjct: 181 DHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSPKRKRQV 218

[Close]

BLAST of CsGy2G015550 vs. TrEMBL
Match: tr|A0A0A0LQ76|A0A0A0LQ76_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302080 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 7.2e-95
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 72  MAGVEGRTFRERMTNYMATLDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGT 131
           MAGVEGRTFRERMTNYMATLDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGT
Sbjct: 1   MAGVEGRTFRERMTNYMATLDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGT 60

Query: 132 SARILKLPEGKSRCCLVKLPSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRR 191
           SARILKLPEGKSRCCLVKLPSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRR
Sbjct: 61  SARILKLPEGKSRCCLVKLPSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRR 120

Query: 192 PKVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKRKRPV 247
           PKVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKRKRPV
Sbjct: 121 PKVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGKPTKCGYKTRSAKRKRPV 175

[Close]

BLAST of CsGy2G015550 vs. TrEMBL
Match: tr|D7T2J7|D7T2J7_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0094g01100 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.7e-67
Identity = 139/201 (69.15%), Postives = 156/201 (77.61%), Query Frame = 0


Query: 44  RPVSSPINQALELPTSVSGKNYLNILYPMAGVEGRTFRERMTNYMATLDINSQIGSCMPL 103
           R  SS + + L  P SV+  ++ N+           FRE M N M +LDINSQIGSCMPL
Sbjct: 7   RAASSTLLKRLLFP-SVANPSHRNLSSVAKDSPHDAFRESMMNQMFSLDINSQIGSCMPL 66

Query: 104 GLMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRCCLVKLPSREEKLIDAKCR 163
             MRIGTIIHNIEINPGQGGKLVR+AGTSA++LK P   SR  LV++PS  +KLID +CR
Sbjct: 67  AAMRIGTIIHNIEINPGQGGKLVRAAGTSAKLLKEP--TSRYVLVRMPSGVQKLIDTRCR 126

Query: 164 ATIGQVSNPGHGTKKLRKAGQSRWLGRRPKVRGVAMNPVDHPHGGGEGKSKSSGSHGRGS 223
           ATIG VSNPGHG KKLRKAGQSRWLGRRP VRGVAMNPVDHPHGGGEG+SKS GSHGRGS
Sbjct: 127 ATIGTVSNPGHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSGGSHGRGS 186

Query: 224 RTPWGKPTKCGYKTRSAKRKR 245
            TPWGKPTKCGYKT   KR++
Sbjct: 187 LTPWGKPTKCGYKTGPLKRRK 204

[Close]

BLAST of CsGy2G015550 vs. TrEMBL
Match: tr|A0A061ECK1|A0A061ECK1_THECC (50S ribosomal protein L2, putative OS=Theobroma cacao OX=3641 GN=TCM_017084 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.9e-67
Identity = 132/195 (67.69%), Postives = 157/195 (80.51%), Query Frame = 0


Query: 50  INQALELPTSVSGKNYLNILYPMAGVEGRTFRERMTNYMATLDINSQIGSCMPLGLMRIG 109
           +N+ L  P+ +   N+ ++    A V  ++  E M   +  LDINSQIGSCMPL  MRIG
Sbjct: 14  LNKLLHPPSRLPCSNFSSV---AADVNNQSMIENMKRELLHLDINSQIGSCMPLAAMRIG 73

Query: 110 TIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRCCLVKLPSREEKLIDAKCRATIGQV 169
           TIIHNIE+NPGQGGKLVR+AGTSA+ILK P  KSR CLV++PS  EKLID++CRAT+G V
Sbjct: 74  TIIHNIEVNPGQGGKLVRAAGTSAKILKEP--KSRYCLVRMPSGVEKLIDSRCRATVGMV 133

Query: 170 SNPGHGTKKLRKAGQSRWLGRRPKVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPWGK 229
           SNP HG KKLRKAGQSRWLGRRP VRGVAMNP+DHPHGGGEG+SKSSGS+G+ SRTPWGK
Sbjct: 134 SNPSHGAKKLRKAGQSRWLGRRPTVRGVAMNPIDHPHGGGEGRSKSSGSYGKTSRTPWGK 193

Query: 230 PTKCGYKTRSAKRKR 245
           P KCGYKT S+KR++
Sbjct: 194 PCKCGYKTASSKRRK 203

[Close]

BLAST of CsGy2G015550 vs. TrEMBL
Match: tr|A0A1R3JNU3|A0A1R3JNU3_9ROSI (Ribosomal protein L2 OS=Corchorus olitorius OX=93759 GN=COLO4_15275 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 5.4e-66
Identity = 133/197 (67.51%), Postives = 154/197 (78.17%), Query Frame = 0


Query: 48  SPINQALELPTSVSGKNYLNILYPMAGVEGRTFRERMTNYMATLDINSQIGSCMPLGLMR 107
           S +N+ L  P+ VS   Y N+    A     T  E M   +  LD+NSQIGSCMP+  MR
Sbjct: 12  SLVNRILHPPSPVS---YRNLSTVAADFNNPTVIENMKRELLNLDVNSQIGSCMPIASMR 71

Query: 108 IGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRCCLVKLPSREEKLIDAKCRATIG 167
           IGTIIHNIE+NPGQGGKLVR+AGTSA+ILK P  KSR CL++LPS  EKLID++CRAT+G
Sbjct: 72  IGTIIHNIEVNPGQGGKLVRAAGTSAKILKDPT-KSRQCLIRLPSGVEKLIDSQCRATVG 131

Query: 168 QVSNPGHGTKKLRKAGQSRWLGRRPKVRGVAMNPVDHPHGGGEGKSKSSGSHGRGSRTPW 227
            VSNP HG KKLR AG SRWLGRRP VRGVAMNPVDHPHGGGEGKSKSSGS+G+ SRTPW
Sbjct: 132 TVSNPSHGAKKLRNAGHSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGSYGKTSRTPW 191

Query: 228 GKPTKCGYKTRSAKRKR 245
           GKP KCGYKT ++KR++
Sbjct: 192 GKPCKCGYKTAASKRRK 204

The following BLAST results are available for this feature:

BLAST of CsGy2G015550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147352.1	1.1e-113	95.98	PREDICTED: 60S ribosomal protein L2, mitochondrial [Cucumis sativus]	[more]
XP_008460907.1	2.9e-103	89.29	PREDICTED: 60S ribosomal protein L2, mitochondrial [Cucumis melo]	[more]
KGN62141.1	1.1e-94	100.00	hypothetical protein Csa_2G302080 [Cucumis sativus]	[more]
XP_022971723.1	4.8e-82	75.80	uncharacterized protein LOC111470392 [Cucurbita maxima]	[more]
XP_023512394.1	1.4e-81	74.89	uncharacterized protein LOC111777160 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy2G015550 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44065.1	8.1e-60	64.17	Ribosomal protein L2 family	[more]
ATCG00830.1	1.6e-31	45.14	ribosomal protein L2	[more]
ATCG01310.1	1.6e-31	45.14	ribosomal protein L2	[more]
AT3G51190.1	1.0e-17	39.72	Ribosomal protein L2 family	[more]
AT2G18020.1	3.6e-15	38.41	Ribosomal protein L2 family	[more]

BLAST of CsGy2G015550 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P0C8K6\|RM02_ORYSA	3.4e-47	61.54	60S ribosomal protein L2, mitochondrial OS=Oryza sativa OX=4530 GN=RPL2 PE=3 SV=...	[more]
sp\|Q2F969\|RM02_ORYSI	3.4e-47	61.54	60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. indica OX=39946 G...	[more]
sp\|P92812\|RM02_ORYSJ	3.4e-47	61.54	60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947...	[more]
sp\|P26859\|RM02_MARPO	3.5e-44	62.59	60S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL2...	[more]
sp\|Q0BUP7\|RL2_GRABC	7.1e-37	57.24	50S ribosomal protein L2 OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / C...	[more]

BLAST of CsGy2G015550 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CEQ1\|A0A1S3CEQ1_CUCME	1.9e-103	89.29	60S ribosomal protein L2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499648 ...	[more]
tr\|A0A0A0LQ76\|A0A0A0LQ76_CUCSA	7.2e-95	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302080 PE=4 SV=1	[more]
tr\|D7T2J7\|D7T2J7_VITVI	1.7e-67	69.15	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0094g01100 PE=4 SV=...	[more]
tr\|A0A061ECK1\|A0A061ECK1_THECC	2.9e-67	67.69	50S ribosomal protein L2, putative OS=Theobroma cacao OX=3641 GN=TCM_017084 PE=4...	[more]
tr\|A0A1R3JNU3\|A0A1R3JNU3_9ROSI	5.4e-66	67.51	Ribosomal protein L2 OS=Corchorus olitorius OX=93759 GN=COLO4_15275 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0015934	large ribosomal subunit
GO:0005840	ribosome

Vocabulary: **Molecular Function**
Term	Definition
GO:0016740	transferase activity
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR008991	Translation_prot_SH3-like_sf
IPR022671	Ribosomal_L2_CS
IPR002171	Ribosomal_L2
IPR005880	Ribosomal_L2_bac/org-type
IPR014726	Ribosomal_L2_dom3
IPR014722	Rib_L2_dom2
IPR022669	Ribosomal_L2_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0032543	mitochondrial translation
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0005622	intracellular
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G015550.1	CsGy2G015550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022669	Ribosomal protein L2, C-terminal	SMART	SM01382	Ribosomal_L2_C_2	coord: 95..230 e-value: 9.0E-71 score: 251.1
IPR022669	Ribosomal protein L2, C-terminal	PFAM	PF03947	Ribosomal_L2_C	coord: 96..228 e-value: 6.8E-51 score: 171.6
IPR014722	Ribosomal protein L2, domain 2	GENE3D	G3DSA:2.30.30.30		coord: 90..170 e-value: 6.7E-29 score: 101.5
IPR014726	Ribosomal protein L2, domain 3	GENE3D	G3DSA:4.10.950.10		coord: 171..246 e-value: 1.3E-29 score: 104.1
IPR005880	Ribosomal protein L2, bacterial/organellar-type	TIGRFAM	TIGR01171	TIGR01171	coord: 88..243 e-value: 1.0E-52 score: 177.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..246
None	No IPR available	PANTHER	PTHR13691:SF34	60S RIBOSOMAL PROTEIN L2-RELATED	coord: 62..244
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 62..244
IPR022671	Ribosomal protein L2, conserved site	PROSITE	PS00467	RIBOSOMAL_L2	coord: 192..203
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	SSF50104	Translation proteins SH3-like domain	coord: 97..242

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G015550	Cla007796	Watermelon (97103) v1	cgybwmB134
CsGy2G015550	Csa2G302080	Cucumber (Chinese Long) v2	cgybcuB056
CsGy2G015550	MELO3C023260	Melon (DHL92) v3.5.1	cgybmeB086
CsGy2G015550	ClCG02G000640	Watermelon (Charleston Gray)	cgybwcgB121
CsGy2G015550	CSPI02G15580	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G015550	CmaCh20G010690	Cucurbita maxima (Rimu)	cgybcmaB219
CsGy2G015550	CmaCh02G006200	Cucurbita maxima (Rimu)	cgybcmaB223
CsGy2G015550	CmoCh02G006240	Cucurbita moschata (Rifu)	cgybcmoB215
CsGy2G015550	CmoCh20G010770	Cucurbita moschata (Rifu)	cgybcmoB210
CsGy2G015550	Cp4.1LG05g10680	Cucurbita pepo (Zucchini)	cgybcpeB247
CsGy2G015550	Cp4.1LG16g00760	Cucurbita pepo (Zucchini)	cgybcpeB194
CsGy2G015550	MELO3C023260.2	Melon (DHL92) v3.6.1	cgybmedB081
CsGy2G015550	CsaV3_2G018130	Cucumber (Chinese Long) v3	cgybcucB064
CsGy2G015550	Cla97C02G026910	Watermelon (97103) v2	cgybwmbB115
CsGy2G015550	Carg24325	Silver-seed gourd	carcgybB0715
CsGy2G015550	Carg11685	Silver-seed gourd	carcgybB1038

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G015550	Cucumber (Chinese Long) v3	cgybcucB089
CsGy2G015550	Watermelon (97103) v2	cgybwmbB094
CsGy2G015550	Wax gourd	cgybwgoB184
CsGy2G015550	Cucumber (Gy14) v2	cgybcgybB066
CsGy2G015550	Cucurbita maxima (Rimu)	cgybcmaB238
CsGy2G015550	Cucurbita moschata (Rifu)	cgybcmoB214
CsGy2G015550	Cucurbita pepo (Zucchini)	cgybcpeB156
CsGy2G015550	Cucurbita pepo (Zucchini)	cgybcpeB199
CsGy2G015550	Cucumber (Chinese Long) v2	cgybcuB084
CsGy2G015550	Bottle gourd (USVL1VR-Ls)	cgyblsiB086
CsGy2G015550	Bottle gourd (USVL1VR-Ls)	cgyblsiB096
CsGy2G015550	Watermelon (Charleston Gray)	cgybwcgB113
CsGy2G015550	Watermelon (97103) v1	cgybwmB127
CsGy2G015550	Wild cucumber (PI 183967)	cgybcpiB084
CsGy2G015550	Silver-seed gourd	carcgybB0253