MELO3C021751 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C021751
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionMediator of RNA polymerase II transcription subunit 22
Locationchr12 : 16606133 .. 16612496 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCCATCCGCCTCGAACCTCACTCGCCGGCGTCTCTCCCATCCCCTTCGTCACACCTTGTTCTGCAGGGCGGCTCATTCTCCCCCGTCTCCCATCCGCGTCGAACAACCAAGCCGGCGTCTCCCTCCCTCGCCACTTGGTTGCCATTTTCGGTGTAAGTCCTTTTTTCCCACTTTTTGAACTTTTTCCTTTCGTCTTTTCGGTGTTTTTGACATTAATTCTAGTCAAAAGAGCCATTAGGGATTGTTGGAGTTTTCATGAGTTTGGTCATCTATATGCTTGTGTTTTTAGTTCTTTAGATAGGAGCGTATGAATTTGTTGTGTAATTTTGCTGTCATAGTTTCTTGATCGTATTTGCCTCCTGGGAAATGAGAATTTGTGTTGGTATGCCTGTGGAACGCTTTGTAAACACTTAGATAGATTAGATTGGAATTTTTTTCCCTGAAAAGTCTGCGCCACTCGCCCAAGGCCCAAGACTTTGGAGACGTCAAGGAACTTTGGGCCTTAGCCAATGGGAGATTGCCCGTCTAGGGAATCTTCCACTAATAGATTTTGATTGCATGGAATCCTTTTGGAGAAAAACAGAAATGCCAATTTAGAATTTAGATAGTTAATACGGTGATAAGAACTCAACTCTGTACCATAGAGCAGTACCATGTAGAAGAAGAAACTTTATTGCAAAAGTTTCGTTTGTGGATAGAATGATATTTTTAATTTACTGATGATGAAGTTGAAGTTAATAGGAGAAATTTGTCATGGGGCCATTCCTGGGATCCAATCTCATATTGTCAGAAGAAGAAAAAAACGAAAAAGAGAAAGAATAAGAATAAACCTGGCATAACTCCTCACTGAAGAGAAAGTTTGAAAAGCAATTGAAGATATAGGATCGTATAAAGCACTTGGCCTAGATGGATTTATGATGGAAATTAGTAAAAATGGGCAGAACCTTTGCAAGATTATATTATCAAATATCAATAGGGATTCCATTTGTGCAAAATAGTTGTGGAGATTGAGAAGAGACACTTCTTGGGACAAATTTGGTGTCATTTGTAAGCTATAAGGCACAGACACTTTAGAAAGCTAGCGTGTCCAACATATTAAAAATGTGCAATAGATGAAATTAGCCACTACCTATACAAAGTAGGCCCAACATTTGCTAGACATGCATGGAACCCGAACATTTGTTTAACTTTGAAAGAAACATTCATCAAACTAATTTTTAAGCACATACATGCGTAAACTTGTGGACTTTGAATAAATTTGGATTCTATCATATAGATTAACTTCCCTTATTGAATCTGAGAATAAGAATCTATGATGTTAACAAGTATAGTCGTCAGCTCCTATACAAAGCAGATGGTATTTATGGGGGGGCATATAGATTTTCACTTTCCTATCTAGATCTTTGGGACTTCGTATCAAAATGTTTTTCATTTTCTGCTTGAAATACCTCCTGTTGGTTACTCTTTAGTTTAGTTTAGAAGATATTTAGTGTGGGAACTTCCCCTATAATTATATTGCAGTTTGTATTAAGTTATAGGTTTTCTTTTCATCATGATTCATCTGGTCCTGCGATTGCTTTAACCACAAAGCTATGCTATTTGAAAATTTTCCTAGAAGAATGTCAACAACTTTGAGTTTGAGATTATATAGTTTGTGTTTTGGTTGTTTTCTGGAAAATGTAATTTTGTTGTGACATCTGTAATGTGTATAAATGTATTTGGATTCAGATTCATTTGTTGTATTTTCTTTTTTTTCCTTTTTTGGAGATGTTTGTATGAAGCAATGGTTTGGAATGAGTCCTTTCAAATAAATTGAAATATTGACATTTAACACAACAGAAACTTTAGATTAAGAACTGGACTAGAGTTAGTTAGGGCCTTAGAACTTAGAAGTACTATTTTTTCTAAGTTAGTAAAAATTTAAACTAGAATAATGGAGATGTATGGAATAAACATCTTGGACTTAAATGTAGATCGATAGCATTTACTTCTCATTAGGCTTCACGTTGTACCTTTCATTTTACACCTCTCGGGTTTAACAACTGAAAGATTTCCCCTCTGCCCTCCTGATAGATGTTTTGAAACTGATCAAAAATTGATATTTTCTTTACAGAGGATGATACAAGCATACAAACAGACATTAAAGTGCCCATTTTGAAAGCTTTTCACTGTCACATATATAACCGTGATTGGCAATTTTCATGCAAGTTTTGTACTTGATCAATGTCTATACCAATGTTTTCTCCCCCACATCTTTTCTGGCCTGGGAACCTTTTTAAAGATCTAACTACAACTAATGGTTCACACTACAAGAAATTATGGATCTCCTGACGCCGGTTTACACTGTTGGGAGAAAAGGCGTCGAAAGATATCGTATCTCTAGACACAACAACTAGAGAGTTGGGAGATACTATATCTCCCGATCCCTGAAACATGCGCGGGCAGTTAGTTAGCATCTTCCTACGCAGTGTTGTGTAGGTGTCGGAAGATAGGACGAACTCGCAACGAGTGCATTTAGTCATCGCGAGTTACAAGAAAGGGGCCGACACATATCATGAGGCATCGGGTGAAAAGAAAACATTTAAAAAATGATTCTATTTTGCCCAACGCCATGCATGTAGGCGTCAGGAGATAATGGTGAACTCCCAACTTAATTAGTAAGGCGTTAGGAGATATGGGGAACTCTTGACGCTGCCAATAAAGCGCGGGAATTAGAGGGAACTCACGACGCGTGTTAGGCTGCGTCAGGAGTTCGCCTTTAAAAATCCTCCCATCTCTGTATTTCACAGATTTGGGAAGGGGAAAGAAGAAAAATGAGCGAAGAAGCCAGAAAACCCACCACCGTCGCTCGTGCCACCATGCATTGTCCTAGTCGCCTTCCTTGTCTCTTTTGGTGCCGCCGCCTGCCCTGTCTCTTTCAGTATGTAATTTATTTAAGCTAGATTACTAATTTTGCCCTAAAATCCCTTTGTTCCCTAAAATCCCTTTGTTCCCTAAAATCCTTTGTGTCCTAAGATCGATTATGTTCTTGTTCTTCATGTGGTTTCTTGTCATGCCCTATTTATCTTTTAGGTTTGATTTTGCTTATGTGGAGAACTCTCTTTGTTTTGAGAATTTGTTAGATTTGCAAGTATATATAATTCAATAGTTAAGAATTTTATAAGTTGATTATAGTTGAAAAAGTTTAATACGTACAACATATTTGTTGAACAACCGGAAACAAATAACTTAAGAAAAAAACAAAGGTAGTAATATATCCTAAACTTGATTAGTGTACAAAAAGAATTAAAAGTATAATATCATTATCTTTAAAACATTAAAATGGAACATTTGAAAGTTGTATGAACCAAACTTTTGTAGTTTCAAATCTTGCTCGCATAAATTTGTGTATAGAAAGGATCTTTTTTGCCAACTTTGTATGGAAACTTAGAAATCTTGCTCGAATCCTCCTACTTTGTTCTATATAATGATTTCTTAATGAAAAAAATGCAATTAAATATTCTTTGGTATATATGTAAAGCTTTACACAATCCCTAGCTTTGTATGGACACTTAGAAATTTTATTGAGTGAAGGAATAGAGAGATTGGAGCGTTTAGATGAGATGTTGGATGTGCAAGTTCATTTTTAGATAGAGACTAGAGAGCTTCACCTCCAATTTTTTTTTTTTTAATTTTGATTATTGAGAGTTCGAGTTTTTCATCAATAACAATACATATAGACTTGCATCAAGTCAAACCTTAGGTTAAAACATGGTTTTACGCAGGGCTGTTTTGTAAAAGTACTTTGTTACAGAGTCATGCAAATTTTCTTTTCCTTCACTTAGGTCAAAACCCTCCATGACTCTGTTCTTACCACCGATTACCACCATTTTGGGGCAGATCAAATTAGTTGTTCAAATCTCCTTGGTTTAACATTCTTCTCACATGTGTATAACGATTGTGAGAATGGAGGATCGAAACTTTCACCTCAAAGATGAAAGATCATGCAAATTACTGCTAATCTAAGTTCATTTGACACCTCCCTACTTTCTTTTTTCTTTCTATAATTAAAGGACATAAAACCCATGGTTTTTTTTTCCCTCTTTTTTTGGTGGGCTAAATTTTTGTAACAGCCCATTAACCACCAAGATCTGAGCCCATCTCTACTATTGAATTCCAATGGTTGTCTAGGGCTTCGTCAACCTCTGTGTTGTGTTGCTTCTTTGTAACACCGGCAACGCCCATAAGCTCCAACCTTCAACAACACAACCGCTGGTTTTTCTCCATTTTTGTTGACGTTCAGTAAAGACCCACTCTCATTCAACCTCAAATTTGAGTTTCCCACTTCTTAATTGGTTAGTTATATTACATGTTAGAATTTGTGAAAGTCTTGTTGAACTGGTTAGAAAGTGTTTTGAAGGTTAGTTTTCTTGATTGGATTTATAGTTTAAATTGTTAATGGTTATGTCTGTCGTGTTAAATTTTTGGGCGTTACATTTTTCTTCCCCGATGTTTCTAATTCCCTTTCGTTTCAATCACCTTGGTATCATTGCAGAGCTGATTCAATTCCCATTTCTATCTCTATTATTATGAACAAAGGCATTGGTGGTGGAACTGGTCCCACTGCAGCGGCTGCGGCGGCGGCAGCTCAGAAGCAGAAACTGCTTCTCCAGAGAGTGGAAACTGATATAGCCAATATTGTTGACAACTTCACCCACCTTGTCAACGTCTCTAGAGTAAAACTCTTTCATTTTTATTGTAGTTCTCTTTTGTGGTTTATCTGCTTGATCTTCTTGATTTAACAACCTCATGGTTGGAATTCATAATTCAAACTTACTGTTGTTGTTTCTTCAGGTGAACGATCCACCAGTTAGAAATTCACAGGAATCTTTTATGATGGAAATGCGCGCCGCCAGAATGGTAAGATACTAAATTTCCCCTTTATTGTTTACTTTCTGTGTTTGTGAAGCTCCTTTTAAGTTGACATCTGGATAGATAGATAGCTCTTTTGTTCGTTCTACAATTGAATGATAATAATCTTATGAAACCTCGATTTTGTGGGATTGAATGATTTTGCAATAAAGTCAGTTACTTATGCGTCTCTTCCAACTTCAGTGAGTATTTCTTCTCCTCTAGCTGCTATTCAAGAAAATTCTCTTCTTTAGTTGAGGTGGTCTTCATATTCGTAATATTTTTGCGGGGATCCCAATTGATTCTTCAGAAAAACTTAATTGAGCTTAGCGTAGCAATTCATTCAACATCTCTGCCTTACCAAAAATTCATGAAATCATTACAGAACTCCAATGACGTCGGTTGGGTTAATGTTGACTCTATTGGGAGATGGAGTGTTTTACTGATTTCGTAGGATGATATGAAGATAATTTTGGTGCTTCTTAAAGGAGGCTACATTTTCTGAATTAAAATCTATTTTCAGCACAAGTCAATTTGTTGGGTAACAAAGATTTATGGGCTAATTGACTGTAGAGATTTTCATAGACCGTCATGTCATAGCATTTGTAGAATTCAGTTGGTGGTGAGATCTTGTTTAGAGAAAATATTTTGGCCTGCTTTTGCTAGTTAATTTATTGGTTCTTGTTATCAGCTGCTGTGTATGCTTTTCAAGGTTTTTCTGGACATGAGAATTGGTTTGACGAGTCTTTGTTTGTTTCTTGGCTGTTCTCGTTTGATTGCTATTGTTTTAAGGTCTTGTTCTGTTCTCTTCTGGGAGTTTGTATCCTTTTTCCTTGTTGAGAACTTTCATTTTTGGTTTCAAACTATTTTAAGGCTTCTTATATTCAGAATGATTATAGGCAATAATATAGCAGGGATTTATTTTGTCTTGATATAGACGATTTCTTTTCATTATTATTGTTATGGCTACAATTTTAGTGTTTTTATACTTGTTTCTTAATAGGTTCAGGCAGCTGATTCTTTGCTGAAGTTGGTTTCAGAACTTAAGCAAACAGCCATCTTTTCTGGATTTGCTTCACTAAACGATCATGTGGAGCAAAGAATAGTGGAATTCAATCAGCAGGCACAGCAAACCGAACGTCTTTTATCTAGAATTGGTGAAGAAGCTGCTGCCAATTTGAAGGAGCTTGAATCTCATTATTATTCTTCAACACAGAGGACTGATCAGAACAACCTAACGTGATTAAGTAAAGTGGAAAGTGGTAAATTAAGTAAATTAATGATGTGATACGGCTGGCTTCTAAACTCAGTTGCTTGCTAACATGGACAATGAAATGTAATTGAACACTTCTAATTTATGTTTCTGGCGATTTTCTTTTGCTTTTTATTATTATGCCAAGCTATATGTGTCGGAACTAACAGAAGATCATTATTCATCTTATTCATCTTCCATCGAAAGTGATAAGTTGGATA

mRNA sequence

TCCCATCCGCCTCGAACCTCACTCGCCGGCGTCTCTCCCATCCCCTTCGTCACACCTTGTTCTGCAGGGCGGCTCATTCTCCCCCGTCTCCCATCCGCGTCGAACAACCAAGCCGGCGTCTCCCTCCCTCGCCACTTGGTTGCCATTTTCGGTAGCTGATTCAATTCCCATTTCTATCTCTATTATTATGAACAAAGGCATTGGTGGTGGAACTGGTCCCACTGCAGCGGCTGCGGCGGCGGCAGCTCAGAAGCAGAAACTGCTTCTCCAGAGAGTGGAAACTGATATAGCCAATATTGTTGACAACTTCACCCACCTTGTCAACGTCTCTAGAGTGAACGATCCACCAGTTAGAAATTCACAGGAATCTTTTATGATGGAAATGCGCGCCGCCAGAATGGTTCAGGCAGCTGATTCTTTGCTGAAGTTGGTTTCAGAACTTAAGCAAACAGCCATCTTTTCTGGATTTGCTTCACTAAACGATCATGTGGAGCAAAGAATAGTGGAATTCAATCAGCAGGCACAGCAAACCGAACGTCTTTTATCTAGAATTGGTGAAGAAGCTGCTGCCAATTTGAAGGAGCTTGAATCTCATTATTATTCTTCAACACAGAGGACTGATCAGAACAACCTAACGTGATTAAGTAAAGTGGAAAGTGGTAAATTAAGTAAATTAATGATGTGATACGGCTGGCTTCTAAACTCAGTTGCTTGCTAACATGGACAATGAAATGTAATTGAACACTTCTAATTTATGTTTCTGGCGATTTTCTTTTGCTTTTTATTATTATGCCAAGCTATATGTGTCGGAACTAACAGAAGATCATTATTCATCTTATTCATCTTCCATCGAAAGTGATAAGTTGGATA

Coding sequence (CDS)

ATGAACAAAGGCATTGGTGGTGGAACTGGTCCCACTGCAGCGGCTGCGGCGGCGGCAGCTCAGAAGCAGAAACTGCTTCTCCAGAGAGTGGAAACTGATATAGCCAATATTGTTGACAACTTCACCCACCTTGTCAACGTCTCTAGAGTGAACGATCCACCAGTTAGAAATTCACAGGAATCTTTTATGATGGAAATGCGCGCCGCCAGAATGGTTCAGGCAGCTGATTCTTTGCTGAAGTTGGTTTCAGAACTTAAGCAAACAGCCATCTTTTCTGGATTTGCTTCACTAAACGATCATGTGGAGCAAAGAATAGTGGAATTCAATCAGCAGGCACAGCAAACCGAACGTCTTTTATCTAGAATTGGTGAAGAAGCTGCTGCCAATTTGAAGGAGCTTGAATCTCATTATTATTCTTCAACACAGAGGACTGATCAGAACAACCTAACGTGA

Protein sequence

MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLSRIGEEAAANLKELESHYYSSTQRTDQNNLT*
Homology
[Close]
BLAST of MELO3C021751 vs. Swiss-Prot
Match: MD22B_ARATH (Mediator of RNA polymerase II transcription subunit 22b OS=Arabidopsis thaliana GN=MED22B PE=1 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 8.9e-59
Identity = 114/140 (81.43%), Postives = 129/140 (92.14%), Query Frame = 1 

Query: 4   GIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFM 63
           G GGG+GPTAAAAAAA QKQK LLQRVETDI ++VDNFT +VNVSRV+DPPV+NSQE++M
Sbjct: 10  GSGGGSGPTAAAAAAALQKQKALLQRVETDITSVVDNFTQIVNVSRVSDPPVKNSQETYM 69

Query: 64  MEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLSRIG 123
           MEMRA+RMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRI EF+Q+A++T RLL+RI 
Sbjct: 70  MEMRASRMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIEEFDQEAEKTNRLLARIA 129

Query: 124 EEAAANLKELESHYYSSTQR 144
           ++A+ANLKELESHYYSS QR
Sbjct: 130 DDASANLKELESHYYSSAQR 149

[Close]
BLAST of MELO3C021751 vs. Swiss-Prot
Match: MD22A_ARATH (Mediator of RNA polymerase II transcription subunit 22a OS=Arabidopsis thaliana GN=MED22A PE=1 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 6.4e-57
Identity = 111/146 (76.03%), Postives = 132/146 (90.41%), Query Frame = 1 

Query: 1   MNKG--IGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNS 60
           MNKG   GGG+GPTAAAAAAA QKQK LLQRV+TDI ++VDNF  +VNV+RV+DPP++NS
Sbjct: 2   MNKGGGSGGGSGPTAAAAAAALQKQKALLQRVDTDITSVVDNFNQIVNVARVSDPPMKNS 61

Query: 61  QESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERL 120
           QE++MMEMRA+R+VQAADSLLKLVSELKQTAIFSGFASLNDHVEQRI EF+Q+A++T RL
Sbjct: 62  QEAYMMEMRASRLVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIAEFDQEAEKTNRL 121

Query: 121 LSRIGEEAAANLKELESHYYSSTQRT 145
           L+RI ++A+A+LKELESHYYSS QR+
Sbjct: 122 LARIADDASASLKELESHYYSSAQRS 147

[Close]
BLAST of MELO3C021751 vs. Swiss-Prot
Match: MED22_DICDI (Putative mediator of RNA polymerase II transcription subunit 22 OS=Dictyostelium discoideum GN=med22 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.2e-17
Identity = 43/143 (30.07%), Postives = 87/143 (60.84%), Query Frame = 1 

Query: 1   MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 60
           MN G G  + P         + Q+   +++++ I  +++N+ +++ +S+VNDP ++N+ E
Sbjct: 1   MNTG-GNNSLPPQTRGEVLFRDQQFFQKQIDSKIMQLLENYHNIIKISKVNDP-LKNASE 60

Query: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLS 120
            + ME R + M+ A + LLK++ ELKQ  I + F+++ + V  + + F+++ ++T + + 
Sbjct: 61  IYEMETRTSNMLNAGEGLLKIIEELKQNLILNDFSTMAEEVRIQNLVFHKENERTNKSIK 120

Query: 121 RIGEEAAANLKELESHYYSSTQR 144
            I EE + +LKELE  YY+S+ +
Sbjct: 121 LISEELSRSLKELEDEYYNSSYK 141

[Close]
BLAST of MELO3C021751 vs. Swiss-Prot
Match: MED22_RAT (Mediator of RNA polymerase II transcription subunit 22 OS=Rattus norvegicus GN=Med22 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-16
Identity = 49/144 (34.03%), Postives = 83/144 (57.64%), Query Frame = 1 

Query: 14  AAAAAAAQKQKLLLQ----RVETDIANIVDNFTHLVNVSRVNDPP-----VRNSQESFMM 73
           A   A  Q ++ LLQ    R++ DI +I+DNFT ++  +++ D        +  Q+++ M
Sbjct: 2   AQQRALPQSKETLLQSYNKRLKDDIKSIMDNFTEIIKTAKIEDETQVSRATQGEQDNYEM 61

Query: 74  EMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLSRIGE 133
            +RAA +V+A +SL+KLVS+LKQ  I + F S+N+ ++QR  +     ++ +R L  + +
Sbjct: 62  HVRAANIVRAGESLMKLVSDLKQFLILNDFPSVNEAIDQRNQQLRALQEECDRKLITLRD 121

Query: 134 EAAANLKELESHYYSSTQRTDQNN 149
           E + +L ELE  YYSS+    + N
Sbjct: 122 EVSIDLYELEEEYYSSSSSLCEAN 145

[Close]
BLAST of MELO3C021751 vs. Swiss-Prot
Match: MED22_MOUSE (Mediator of RNA polymerase II transcription subunit 22 OS=Mus musculus GN=Med22 PE=1 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-16
Identity = 49/144 (34.03%), Postives = 83/144 (57.64%), Query Frame = 1 

Query: 14  AAAAAAAQKQKLLLQ----RVETDIANIVDNFTHLVNVSRVNDPP-----VRNSQESFMM 73
           A   A  Q ++ LLQ    R++ DI +I+DNFT ++  +++ D        +  Q+++ M
Sbjct: 2   AQQRALPQSKETLLQSYNKRLKDDIKSIMDNFTEIIKTAKIEDETQVSRATQGEQDNYEM 61

Query: 74  EMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLSRIGE 133
            +RAA +V+A +SL+KLVS+LKQ  I + F S+N+ ++QR  +     ++ +R L  + +
Sbjct: 62  HVRAANIVRAGESLMKLVSDLKQFLILNDFPSVNEAIDQRNQQLRALQEECDRKLITLRD 121

Query: 134 EAAANLKELESHYYSSTQRTDQNN 149
           E + +L ELE  YYSS+    + N
Sbjct: 122 EVSIDLYELEEEYYSSSSSLCEAN 145

[Close]
BLAST of MELO3C021751 vs. TrEMBL
Match: A0A0A0M174_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701970 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 3.1e-74
Identity = 148/150 (98.67%), Postives = 150/150 (100.00%), Query Frame = 1 

Query: 1   MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 60
           MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE
Sbjct: 1   MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 60

Query: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLS 120
           SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQT+RLLS
Sbjct: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTDRLLS 120

Query: 121 RIGEEAAANLKELESHYYSSTQRTDQNNLT 151
           RIGEEAAANLKELESHYYSSTQRTDQN+LT
Sbjct: 121 RIGEEAAANLKELESHYYSSTQRTDQNSLT 150

[Close]
BLAST of MELO3C021751 vs. TrEMBL
Match: A0A0D2N902_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G075400 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 5.4e-63
Identity = 126/144 (87.50%), Postives = 137/144 (95.14%), Query Frame = 1 

Query: 1   MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 60
           MNKG G GTGPTAAAAAAAAQKQK ++QRVETDIANIVDNFT LVNV+RVNDPPVRNSQE
Sbjct: 1   MNKGTGAGTGPTAAAAAAAAQKQKTMMQRVETDIANIVDNFTQLVNVARVNDPPVRNSQE 60

Query: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLS 120
           SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVE+R  EFNQQA++T+++L+
Sbjct: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVERRTTEFNQQAERTDQMLA 120

Query: 121 RIGEEAAANLKELESHYYSSTQRT 145
           RIGEEAAA+LKELESHYYSS QRT
Sbjct: 121 RIGEEAAASLKELESHYYSSAQRT 144

[Close]
BLAST of MELO3C021751 vs. TrEMBL
Match: M5W3R2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012665mg PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 2.7e-62
Identity = 126/142 (88.73%), Postives = 137/142 (96.48%), Query Frame = 1 

Query: 6   GGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMME 65
           GGG+GPTAAAAAAAAQKQK LLQRVETDIANIVDNF+ LVNVSRVNDPPVRNSQE+FMME
Sbjct: 15  GGGSGPTAAAAAAAAQKQKALLQRVETDIANIVDNFSSLVNVSRVNDPPVRNSQEAFMME 74

Query: 66  MRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLSRIGEE 125
           MRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQA++T+++L+RIGEE
Sbjct: 75  MRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAEKTDQMLARIGEE 134

Query: 126 AAANLKELESHYYSSTQRTDQN 148
           AAA+LKELESHYYSS  RT +N
Sbjct: 135 AAASLKELESHYYSSALRTSEN 156

[Close]
BLAST of MELO3C021751 vs. TrEMBL
Match: A0A061F1S0_THECC (Surfeit locus protein 5 subunit 22 of Mediator complex OS=Theobroma cacao GN=TCM_025935 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.3e-61
Identity = 124/147 (84.35%), Postives = 139/147 (94.56%), Query Frame = 1 

Query: 1   MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 60
           MNKG G GTGPTAAAAAAAAQKQK ++QRVETDI NIVDNFT LVNV+RVNDPPVRNSQE
Sbjct: 1   MNKGTGVGTGPTAAAAAAAAQKQKTMMQRVETDIVNIVDNFTQLVNVARVNDPPVRNSQE 60

Query: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLS 120
           +FMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQR VEF+QQA++T+R+L+
Sbjct: 61  AFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRSVEFDQQAEKTDRMLA 120

Query: 121 RIGEEAAANLKELESHYYSSTQRTDQN 148
           RIGEEAAA+LKELESH+YSS +RT ++
Sbjct: 121 RIGEEAAASLKELESHHYSSARRTAES 147

[Close]
BLAST of MELO3C021751 vs. TrEMBL
Match: D7T100_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0085g01120 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.3e-61
Identity = 125/146 (85.62%), Postives = 136/146 (93.15%), Query Frame = 1 

Query: 1   MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 60
           MNKG G G GPTAAAAAAAAQKQK LLQRVETDIAN+VD+FT LVNV+RVNDPPVRNSQE
Sbjct: 1   MNKGGGAGGGPTAAAAAAAAQKQKTLLQRVETDIANVVDHFTFLVNVARVNDPPVRNSQE 60

Query: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLS 120
           +FMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHV+QR  EFNQQA++T+ LL+
Sbjct: 61  AFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVDQREAEFNQQAEKTDHLLA 120

Query: 121 RIGEEAAANLKELESHYYSSTQRTDQ 147
           RIGEEAAA+LKELESHYYSS QRT +
Sbjct: 121 RIGEEAAASLKELESHYYSSAQRTSE 146

[Close]
BLAST of MELO3C021751 vs. TAIR10
Match: AT1G07950.1 (AT1G07950.1 Surfeit locus protein 5 subunit 22 of Mediator complex)

HSP 1 Score: 227.6 bits (579), Expect = 5.0e-60
Identity = 114/140 (81.43%), Postives = 129/140 (92.14%), Query Frame = 1 

Query: 4   GIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFM 63
           G GGG+GPTAAAAAAA QKQK LLQRVETDI ++VDNFT +VNVSRV+DPPV+NSQE++M
Sbjct: 10  GSGGGSGPTAAAAAAALQKQKALLQRVETDITSVVDNFTQIVNVSRVSDPPVKNSQETYM 69

Query: 64  MEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLSRIG 123
           MEMRA+RMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRI EF+Q+A++T RLL+RI 
Sbjct: 70  MEMRASRMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIEEFDQEAEKTNRLLARIA 129

Query: 124 EEAAANLKELESHYYSSTQR 144
           ++A+ANLKELESHYYSS QR
Sbjct: 130 DDASANLKELESHYYSSAQR 149

[Close]
BLAST of MELO3C021751 vs. TAIR10
Match: AT1G16430.1 (AT1G16430.1 Surfeit locus protein 5 subunit 22 of Mediator complex)

HSP 1 Score: 221.5 bits (563), Expect = 3.6e-58
Identity = 111/146 (76.03%), Postives = 132/146 (90.41%), Query Frame = 1 

Query: 1   MNKG--IGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNS 60
           MNKG   GGG+GPTAAAAAAA QKQK LLQRV+TDI ++VDNF  +VNV+RV+DPP++NS
Sbjct: 2   MNKGGGSGGGSGPTAAAAAAALQKQKALLQRVDTDITSVVDNFNQIVNVARVSDPPMKNS 61

Query: 61  QESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERL 120
           QE++MMEMRA+R+VQAADSLLKLVSELKQTAIFSGFASLNDHVEQRI EF+Q+A++T RL
Sbjct: 62  QEAYMMEMRASRLVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIAEFDQEAEKTNRL 121

Query: 121 LSRIGEEAAANLKELESHYYSSTQRT 145
           L+RI ++A+A+LKELESHYYSS QR+
Sbjct: 122 LARIADDASASLKELESHYYSSAQRS 147

[Close]
BLAST of MELO3C021751 vs. NCBI nr
Match: gi|659118280|ref|XP_008459039.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 22b-like isoform X2 [Cucumis melo])

HSP 1 Score: 288.9 bits (738), Expect = 5.2e-75
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1 

Query: 1   MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 60
           MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE
Sbjct: 1   MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 60

Query: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLS 120
           SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLS
Sbjct: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLS 120

Query: 121 RIGEEAAANLKELESHYYSSTQRTDQNNLT 151
           RIGEEAAANLKELESHYYSSTQRTDQNNLT
Sbjct: 121 RIGEEAAANLKELESHYYSSTQRTDQNNLT 150

[Close]
BLAST of MELO3C021751 vs. NCBI nr
Match: gi|659118278|ref|XP_008459037.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 22a-like isoform X1 [Cucumis melo])

HSP 1 Score: 288.9 bits (738), Expect = 5.2e-75
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1 

Query: 1   MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 60
           MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE
Sbjct: 48  MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 107

Query: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLS 120
           SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLS
Sbjct: 108 SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLS 167

Query: 121 RIGEEAAANLKELESHYYSSTQRTDQNNLT 151
           RIGEEAAANLKELESHYYSSTQRTDQNNLT
Sbjct: 168 RIGEEAAANLKELESHYYSSTQRTDQNNLT 197

[Close]
BLAST of MELO3C021751 vs. NCBI nr
Match: gi|449455405|ref|XP_004145443.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 22b-like [Cucumis sativus])

HSP 1 Score: 285.8 bits (730), Expect = 4.4e-74
Identity = 148/150 (98.67%), Postives = 150/150 (100.00%), Query Frame = 1 

Query: 1   MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 60
           MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE
Sbjct: 1   MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 60

Query: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLS 120
           SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQT+RLLS
Sbjct: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTDRLLS 120

Query: 121 RIGEEAAANLKELESHYYSSTQRTDQNNLT 151
           RIGEEAAANLKELESHYYSSTQRTDQN+LT
Sbjct: 121 RIGEEAAANLKELESHYYSSTQRTDQNSLT 150

[Close]
BLAST of MELO3C021751 vs. NCBI nr
Match: gi|823164821|ref|XP_012482354.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 22b-like [Gossypium raimondii])

HSP 1 Score: 248.4 bits (633), Expect = 7.8e-63
Identity = 126/144 (87.50%), Postives = 137/144 (95.14%), Query Frame = 1 

Query: 1   MNKGIGGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQE 60
           MNKG G GTGPTAAAAAAAAQKQK ++QRVETDIANIVDNFT LVNV+RVNDPPVRNSQE
Sbjct: 1   MNKGTGAGTGPTAAAAAAAAQKQKTMMQRVETDIANIVDNFTQLVNVARVNDPPVRNSQE 60

Query: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLS 120
           SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVE+R  EFNQQA++T+++L+
Sbjct: 61  SFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVERRTTEFNQQAERTDQMLA 120

Query: 121 RIGEEAAANLKELESHYYSSTQRT 145
           RIGEEAAA+LKELESHYYSS QRT
Sbjct: 121 RIGEEAAASLKELESHYYSSAQRT 144

[Close]
BLAST of MELO3C021751 vs. NCBI nr
Match: gi|595807940|ref|XP_007202694.1| (hypothetical protein PRUPE_ppa012665mg [Prunus persica])

HSP 1 Score: 246.1 bits (627), Expect = 3.8e-62
Identity = 126/142 (88.73%), Postives = 137/142 (96.48%), Query Frame = 1 

Query: 6   GGGTGPTAAAAAAAAQKQKLLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMME 65
           GGG+GPTAAAAAAAAQKQK LLQRVETDIANIVDNF+ LVNVSRVNDPPVRNSQE+FMME
Sbjct: 15  GGGSGPTAAAAAAAAQKQKALLQRVETDIANIVDNFSSLVNVSRVNDPPVRNSQEAFMME 74

Query: 66  MRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAQQTERLLSRIGEE 125
           MRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQA++T+++L+RIGEE
Sbjct: 75  MRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQQAEKTDQMLARIGEE 134

Query: 126 AAANLKELESHYYSSTQRTDQN 148
           AAA+LKELESHYYSS  RT +N
Sbjct: 135 AAASLKELESHYYSSALRTSEN 156

The following BLAST results are available for this feature:
BLAST of MELO3C021751 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MD22B_ARATH8.9e-5981.43Mediator of RNA polymerase II transcription subunit 22b OS=Arabidopsis thaliana ... [more]
MD22A_ARATH6.4e-5776.03Mediator of RNA polymerase II transcription subunit 22a OS=Arabidopsis thaliana ... [more]
MED22_DICDI2.2e-1730.07Putative mediator of RNA polymerase II transcription subunit 22 OS=Dictyostelium... [more]
MED22_RAT1.1e-1634.03Mediator of RNA polymerase II transcription subunit 22 OS=Rattus norvegicus GN=M... [more]
MED22_MOUSE1.1e-1634.03Mediator of RNA polymerase II transcription subunit 22 OS=Mus musculus GN=Med22 ... [more]
BLAST of MELO3C021751 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M174_CUCSA3.1e-7498.67Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701970 PE=4 SV=1[more]
A0A0D2N902_GOSRA5.4e-6387.50Uncharacterized protein OS=Gossypium raimondii GN=B456_005G075400 PE=4 SV=1[more]
M5W3R2_PRUPE2.7e-6288.73Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012665mg PE=4 SV=1[more]
A0A061F1S0_THECC1.3e-6184.35Surfeit locus protein 5 subunit 22 of Mediator complex OS=Theobroma cacao GN=TCM... [more]
D7T100_VITVI2.3e-6185.62Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0085g01120 PE=4 SV=... [more]
BLAST of MELO3C021751 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G07950.15.0e-6081.43 Surfeit locus protein 5 subunit 22 of Mediator complex[more]
AT1G16430.13.6e-5876.03 Surfeit locus protein 5 subunit 22 of Mediator complex[more]
BLAST of MELO3C021751 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659118280|ref|XP_008459039.1|5.2e-75100.00PREDICTED: mediator of RNA polymerase II transcription subunit 22b-like isoform ... [more]
gi|659118278|ref|XP_008459037.1|5.2e-75100.00PREDICTED: mediator of RNA polymerase II transcription subunit 22a-like isoform ... [more]
gi|449455405|ref|XP_004145443.1|4.4e-7498.67PREDICTED: mediator of RNA polymerase II transcription subunit 22b-like [Cucumis... [more]
gi|823164821|ref|XP_012482354.1|7.8e-6387.50PREDICTED: mediator of RNA polymerase II transcription subunit 22b-like [Gossypi... [more]
gi|595807940|ref|XP_007202694.1|3.8e-6288.73hypothetical protein PRUPE_ppa012665mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009332Med22
Vocabulary: Molecular Function
TermDefinition
GO:0001104RNA polymerase II transcription cofactor activity
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription from RNA polymerase II promoter
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006357 regulation of transcription from RNA polymerase II promoter
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0016592 mediator complex
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0001104 RNA polymerase II transcription cofactor activity
molecular_function GO:0003712 transcription cofactor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021751T1MELO3C021751T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009332Mediator of RNA polymerase II transcription subunit 22PANTHERPTHR12434FAMILY NOT NAMEDcoord: 1..148
score: 1.7
IPR009332Mediator of RNA polymerase II transcription subunit 22PFAMPF06179Med22coord: 28..127
score: 3.3
NoneNo IPR availableunknownCoilCoilcoord: 98..125
scor
NoneNo IPR availablePANTHERPTHR12434:SF6MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 22coord: 1..148
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C021751Csa1G701970Cucumber (Chinese Long) v2cumeB017
MELO3C021751CSPI01G34450Wild cucumber (PI 183967)cpimeB013
MELO3C021751Cucsa.003880Cucumber (Gy14) v1cgymeB033
MELO3C021751CsGy1G032920Cucumber (Gy14) v2cgybmeB012
MELO3C021751CsaV3_1G046300Cucumber (Chinese Long) v3cucmeB012
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C021751Watermelon (97103) v2mewmbB141
MELO3C021751Wax gourdmewgoB164
MELO3C021751Cucurbita maxima (Rimu)cmameB192
MELO3C021751Cucurbita maxima (Rimu)cmameB364
MELO3C021751Cucurbita moschata (Rifu)cmomeB179
MELO3C021751Cucurbita moschata (Rifu)cmomeB357
MELO3C021751Watermelon (Charleston Gray)mewcgB140
MELO3C021751Watermelon (97103) v1mewmB156
MELO3C021751Cucurbita pepo (Zucchini)cpemeB027
MELO3C021751Cucurbita pepo (Zucchini)cpemeB477
MELO3C021751Bottle gourd (USVL1VR-Ls)lsimeB180
MELO3C021751Silver-seed gourdcarmeB0119