MELO3C020598.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C020598.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPentatricopeptide repeat-containing family protein
Locationchr12 : 1337146 .. 1340534 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCTCCTTCTCACGCCTATTTTCCTTCTCCTCTTCCAACTCATTGCGCCGCCGTCACTACCAACTCTCTCCACCGTTTTGTTTGCTCCTTCTCCTTCGTCTCCGTATATAACTCTGCGCCGCAGTCGTACGCCGGAAATATCCCCTTTCATCCCTCTCTGCTTCAACTGCTCCGGCATTCGCGACTGCCCAACCTTTTTCTACTCGTCGCTCACTACCCACCGGATTCTTCCGCCAAAGACGAAAACCGCACTCTATCTTCGGCAGCCCCTCCCTCCTTCAGTCGCTCAGTTCGCAGGGATAAGTCTTTGCCCATCTTCATTTTCTTTCTTCGAGTCACCAATTTGTAAACAAGATACCACCTGGTTCTGATGCCTCTCATAAATTACAAAACCCTCTCTGCTCTTCTCCTCTCCTTCCTGAAGAATCTCCTCATTCCACTTTGAATTCAGGTTGCAATAATCAGATGGCAATTCGGTGGTTTTCCAGGTCGAAATTGCCCATTTTTGCTTTGGTATTCCTACGGGGTTTAACGAGGAGACCAATTAGAGATGTCCCATTACCAGTTACATCGACGATTACTGGTTTTCAGCCGGATTCGAGCCGACCCATATGGGGATTCCGGCTGTATCACGACGGGAGGCCTCGGGGACCCCTTTGGAGAAGCCGGAAAGCAATTGGTAAAGAAGCACTTTTCGTTATTCAGGGATTGAAGAGATTCAAGGAAGATGAAGAGAAACTCGGAAAGTTCATGAAGAGTCATGTTTCAAGGCTCTTGAAATTGGATATGCTTGCTGTGCTTGGTGAACTTGAGCGGCAGGAGGAGGTTGCTTTAGCTGTCAAGGTTTATTTCCATTTCCTTTTCTTCAATATGTTCTGTCGTTTTTGTTGCTCTTTCTGGATCTTCACATTCATTTTAGATTTTACGTAATGGGTCGTCTCAGAAATTGATAATGGGCTTCTGTACATTACACATAATATCGCTGTCTTGCTCTTGTTTGTTGTCACTGCAACTTCTTTATCTTGTTAGTTGATACTGTGAGTTTTCTTCTTAACTGTTATGTTATTGATGGTTAGTTCCTTTATTTGAATTACTTTACTACTGCTGCATGTGAGGTTCTATTCTGTTCTTCAATTTGGAAAATTATGTTTCTCAGCTTCTAGCTTCCTTGGTATGAATTTGATGTTCTTGACTTTTTCCCTGCCTCCTTTCATGGAGCTCTTGTGCAATTTTTTTTTAAGTTTCAACTATTTCCTTCTTTATTCATGGTAGTAATTGAAGAATGCTTAAGGGAGGTCGTAGAGGAAGTAAACTCGTGAATTGGGGTTCCTTTAAATGATATTGTTATTTTCGCACTTTGTCTTAATAGCTTAGCTTGATTTATGTCGATGTTGCTCTTGCATTCAAAATTATTTCTTCCTTTTGAATGATTAAAGATCTCAAATATGAAATCTAGTTCATTTTAGTTGCGTATGGAAACATTTTCTTTTACATTCTTTTTATCTCCAACTCGAGATTGAATTGATTTTACTTCATTAGTTTCTGGGAATCTTACATGCTTGTTGAAATTCCCAGATATTTAGGTTGATTCGGAAGCAAGACTGGTACAAGCCTGATGTTTATATATATAAAGACTTGATTATTGCATTAGCTAGAAGTAAAAAGATGGATGACGCGATGAAATTATGGGAAAGCATGAGAGAGGAAAATTTATTCCCCGACTCTCAAACGTATACTGAAGTCATCAGAGGTTTCTTGAGATATGGATCTCCTTCTGATGCAATGAACGTATATGAGGATATGAAGAAGTCTCCAGAGCCACCAGACGAGTTGCCATTTAGAATTTTATTGAAAGGCCTTTTGCCACACCCCCTTTTGAGAAACAGAGTAAAGCAAGACTTTGAGGAGCTCTTTCCTGACCAGCATGTGTTCGATCCCCCAGAAGAGATATTCAGCCTACGTTGAGGTATGTTTTATGCAATTCTTTTTTTTACCCCTTTAGCTCTTTCTTCTCAATTAATGTTGATTTTTTTCTTGTATTCTGAAGGTTGGTAACTTGGTACCAGTACCACTTAATAGGCAGTAATAGTAGGCCATTTGCCATTATATGCTTCCTTGTGACATTTAATATCTTATGACTTTTTACATACCAAATATTTTTCACTTTTTTGAAGAAATAAGAAACGACCAAAGCGTGCCTGTGAGTAAAATTAGCTTGGGAAACCCAGAGAAGGTAGGATAAGAGTCGGTCAGATATAAAACGAGTCTCATGTGGATAGTAGTTGAGTTGGAGCCAAGAATGCTCTTAGTCTTAGGAATTAGGATACTCTTGTCTTGGATCTCTTGGGAAGAGGATCAATTGAGTCGTGTTGTCCTTGTGTTTAGAACTTGATACTATCCTCTTCCAGCCCTTCAAATGAAATGCAGCAAAACTGAAGGAAGGAAAATTCATAGATCAACCCCATTGTCTCCGCTCTATGGAAACTACATACTACAAGATCACCCGGTGTATGTCTTCAATTTATAGGTTATGAACCAAACATAGAGTTCTATTCGACTGGTGAGGAGCTTATCCTTCACCCTCCCTTTCGTGTTCAGGGGCGTTTTCTTGTAACAGACTGGGGTACATGCTATTTTGTTGGGGATTTGTGGAGTGAGACAATAGAGTGTTCAAAGGGCAGGATAGTTTTTAAAACGATATTTAGTCCCTCATTAGATTCTCTTTTTCTAAACTCTTTGTAAGTTGTAACTATTTGCCTGATCATATTGCTCTAGGCTGGAGCCCTTGCTTGTAGCTTGGCGTGTATTCTGCTGTTTATTCATGATGAAAAGATGAAAAGTGGTATGCATTGGTTGTCCACTCTTTTGTTGGTTTAGTAGATTCTTTTGGCAATGTAGAGTTCTATTAAATGTAAAAAGTGTTTTAACTATAACAAATCGACCTTTAGCCCTTTATCTTGCATGGTCTTGTTTTCAAGTACTTCATTGGCCCTGAATTCATCCTAATATGCTATACATCTGATCTTTCTCTTTTTCTCTTTTTAAATTATGTTGTATTACGCTTCATTTCAGTGAATTAACATGACGGTTTGTCAACGAACATTATTCCGGTTTCTTGATCTTATCCCTGCTGAATCTGAAAACAACCAAGTGTGTGAAGCTTGACGATATGAAGCTGCAAGGAGATGGAGTTGTTATTGATAACATTTCTCTGGATCTATGACGACTTGGGATTCAGAGAAGGGAAGGAAACGGTGAAAATACCAAAACTTGAATCAAATGTTGGTGTTCATTTCTGTTTTTAGAGAGTGCAGTTTGTTGAGGGATCATTGCCCAGAAATTTTCTATTTAACCGACGAATCTGAATGCCACAAAGAAATTCATATGTC

mRNA sequence

GGCTCCTTCTCACGCCTATTTTCCTTCTCCTCTTCCAACTCATTGCGCCGCCGTCACTACCAACTCTCTCCACCGTTTTGTTTGCTCCTTCTCCTTCGTCTCCGTATATAACTCTGCGCCGCAGTCGTACGCCGGAAATATCCCCTTTCATCCCTCTCTGCTTCAACTGCTCCGGCATTCGCGACTGCCCAACCTTTTTCTACTCGTCGCTCACTACCCACCGGATTCTTCCGCCAAAGACGAAAACCGCACTCTATCTTCGGCAGCCCCTCCCTCCTTCAGTCGCTCAGTTCGCAGGGATAAGTCTTTGCCCATCTTCATTTTCTTTCTTCGAGTCACCAATTTGTAAACAAGATACCACCTGGTTCTGATGCCTCTCATAAATTACAAAACCCTCTCTGCTCTTCTCCTCTCCTTCCTGAAGAATCTCCTCATTCCACTTTGAATTCAGGTTGCAATAATCAGATGGCAATTCGGTGGTTTTCCAGGTCGAAATTGCCCATTTTTGCTTTGGTATTCCTACGGGGTTTAACGAGGAGACCAATTAGAGATGTCCCATTACCAGTTACATCGACGATTACTGGTTTTCAGCCGGATTCGAGCCGACCCATATGGGGATTCCGGCTGTATCACGACGGGAGGCCTCGGGGACCCCTTTGGAGAAGCCGGAAAGCAATTGGTAAAGAAGCACTTTTCGTTATTCAGGGATTGAAGAGATTCAAGGAAGATGAAGAGAAACTCGGAAAGTTCATGAAGAGTCATGTTTCAAGGCTCTTGAAATTGGATATGCTTGCTGTGCTTGGTGAACTTGAGCGGCAGGAGGAGGTTGCTTTAGCTGTCAAGATATTTAGGTTGATTCGGAAGCAAGACTGGTACAAGCCTGATGTTTATATATATAAAGACTTGATTATTGCATTAGCTAGAAGTAAAAAGATGGATGACGCGATGAAATTATGGGAAAGCATGAGAGAGGAAAATTTATTCCCCGACTCTCAAACGTATACTGAAGTCATCAGAGGTTTCTTGAGATATGGATCTCCTTCTGATGCAATGAACGTATATGAGGATATGAAGAAGTCTCCAGAGCCACCAGACGAGTTGCCATTTAGAATTTTATTGAAAGGCCTTTTGCCACACCCCCTTTTGAGAAACAGAGTAAAGCAAGACTTTGAGGAGCTCTTTCCTGACCAGCATGTGTTCGATCCCCCAGAAGAGATATTCAGCCTACGTTGAGTGAATTAACATGACGGTTTGTCAACGAACATTATTCCGGTTTCTTGATCTTATCCCTGCTGAATCTGAAAACAACCAAGTGTGTGAAGCTTGACGATATGAAGCTGCAAGGAGATGGAGTTGTTATTGATAACATTTCTCTGGATCTATGACGACTTGGGATTCAGAGAAGGGAAGGAAACGGTGAAAATACCAAAACTTGAATCAAATGTTGGTGTTCATTTCTGTTTTTAGAGAGTGCAGTTTGTTGAGGGATCATTGCCCAGAAATTTTCTATTTAACCGACGAATCTGAATGCCACAAAGAAATTCATATGTC

Coding sequence (CDS)

ATGGCAATTCGGTGGTTTTCCAGGTCGAAATTGCCCATTTTTGCTTTGGTATTCCTACGGGGTTTAACGAGGAGACCAATTAGAGATGTCCCATTACCAGTTACATCGACGATTACTGGTTTTCAGCCGGATTCGAGCCGACCCATATGGGGATTCCGGCTGTATCACGACGGGAGGCCTCGGGGACCCCTTTGGAGAAGCCGGAAAGCAATTGGTAAAGAAGCACTTTTCGTTATTCAGGGATTGAAGAGATTCAAGGAAGATGAAGAGAAACTCGGAAAGTTCATGAAGAGTCATGTTTCAAGGCTCTTGAAATTGGATATGCTTGCTGTGCTTGGTGAACTTGAGCGGCAGGAGGAGGTTGCTTTAGCTGTCAAGATATTTAGGTTGATTCGGAAGCAAGACTGGTACAAGCCTGATGTTTATATATATAAAGACTTGATTATTGCATTAGCTAGAAGTAAAAAGATGGATGACGCGATGAAATTATGGGAAAGCATGAGAGAGGAAAATTTATTCCCCGACTCTCAAACGTATACTGAAGTCATCAGAGGTTTCTTGAGATATGGATCTCCTTCTGATGCAATGAACGTATATGAGGATATGAAGAAGTCTCCAGAGCCACCAGACGAGTTGCCATTTAGAATTTTATTGAAAGGCCTTTTGCCACACCCCCTTTTGAGAAACAGAGTAAAGCAAGACTTTGAGGAGCTCTTTCCTGACCAGCATGTGTTCGATCCCCCAGAAGAGATATTCAGCCTACGTTGA

Protein sequence

MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFPDQHVFDPPEEIFSLR
Homology
[Close]
BLAST of MELO3C020598.2 vs. NCBI nr
Match: XP_008457435.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g46870 [Cucumis melo])

HSP 1 Score: 392.9 bits (1008), Expect = 8.4e-106
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0 

Query: 1   MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRP 60
           MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRP
Sbjct: 1   MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEE 120
           RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEE
Sbjct: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEE 120

Query: 121 VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXXX 180
           VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXXX
Sbjct: 121 VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELFP 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELFP
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELFP 240

Query: 241 DQHVFDPPEEIFSLR 256
           DQHVFDPPEEIFSLR
Sbjct: 241 DQHVFDPPEEIFSLR 255

[Close]
BLAST of MELO3C020598.2 vs. NCBI nr
Match: XP_004145279.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g46870 [Cucumis sativus] >KGN65758.1 hypothetical protein Csa_1G525290 [Cucumis sativus])

HSP 1 Score: 375.9 bits (964), Expect = 1.1e-100
Identity = 246/255 (96.47%), Postives = 249/255 (97.65%), Query Frame = 0 

Query: 1   MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRP 60
           MAIRWFSRSKLP+FA VFL+GLTRRPIRDVPLPV STIT FQPDS RPIWGFRLYHDGRP
Sbjct: 1   MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEE 120
           RGPLWRSRKAIGKEALFVIQGLKRFKEDEEK  KFMKSHVSRLLKLDM+AVLGELERQEE
Sbjct: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLDMVAVLGELERQEE 120

Query: 121 VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXXX 180
           VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXXX
Sbjct: 121 VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELFP 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELFP
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELFP 240

Query: 241 DQHVFDPPEEIFSLR 256
           DQHVFDPPEEIFSLR
Sbjct: 241 DQHVFDPPEEIFSLR 255

[Close]
BLAST of MELO3C020598.2 vs. NCBI nr
Match: XP_022158131.1 (pentatricopeptide repeat-containing protein At3g46870 [Momordica charantia])

HSP 1 Score: 349.4 bits (895), Expect = 1.1e-92
Identity = 233/255 (91.37%), Postives = 245/255 (96.08%), Query Frame = 0 

Query: 1   MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRP 60
           MAIR FSRSKLPIFA VFLRGLTRRPIRD+PLPV S ITGFQPDSSRPI GFR YHDGRP
Sbjct: 1   MAIRGFSRSKLPIFASVFLRGLTRRPIRDIPLPVKSKITGFQPDSSRPICGFRPYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEE 120
           RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKL KFMKSHVSRLLKLDM++VLGELERQEE
Sbjct: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKSHVSRLLKLDMISVLGELERQEE 120

Query: 121 VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXXX 180
           VALAVKIFRLI+KQDWYKPDV++YKDLIIALA SKKMDDAM+LWESMR+E+L XXXXXXX
Sbjct: 121 VALAVKIFRLIQKQDWYKPDVFMYKDLIIALAGSKKMDDAMELWESMRKEDLFXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELFP 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRN+VKQDFEELFP
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNKVKQDFEELFP 240

Query: 241 DQHVFDPPEEIFSLR 256
           DQ+V+DPPEEIF LR
Sbjct: 241 DQNVYDPPEEIFGLR 255

[Close]
BLAST of MELO3C020598.2 vs. NCBI nr
Match: XP_022964699.1 (protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita moschata] >XP_022964700.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita moschata] >XP_022964701.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita moschata])

HSP 1 Score: 340.1 bits (871), Expect = 6.4e-90
Identity = 224/255 (87.84%), Postives = 241/255 (94.51%), Query Frame = 0 

Query: 1   MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRP 60
           MA+RWFS+ KLPI   VFLRGL RRPIRD+PLPV ST+ GFQPDSSRP+ GFRLYHDGRP
Sbjct: 1   MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEE 120
           RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKL KFMK HV RLLKLDM+AVLGELERQEE
Sbjct: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEE 120

Query: 121 VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXXX 180
           VALAVK+FRLI+KQ+WYKPDV++YKDLI+ALARSK+MDDAM+LWESMR+E  XXXXXXXX
Sbjct: 121 VALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKEXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELFP 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEE+FP
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEEIFP 240

Query: 241 DQHVFDPPEEIFSLR 256
           DQHV+DPPEEIF LR
Sbjct: 241 DQHVYDPPEEIFGLR 255

[Close]
BLAST of MELO3C020598.2 vs. NCBI nr
Match: XP_023521051.1 (protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023522412.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 339.0 bits (868), Expect = 1.4e-89
Identity = 223/255 (87.45%), Postives = 242/255 (94.90%), Query Frame = 0 

Query: 1   MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRP 60
           MA+RWFS+SKLPI   VFLRGLT RPIRD+ LPV ST+ GFQPDSS+P+ GFRLYHDGRP
Sbjct: 1   MAMRWFSKSKLPICYSVFLRGLTTRPIRDISLPVKSTVAGFQPDSSQPLSGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEE 120
           RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKL KFMK HV RLLKLDM+AVLGELERQEE
Sbjct: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEE 120

Query: 121 VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXXX 180
           VALAVK+FRLI+KQ+WYKPDV++YKDLI+ALARSK+MD+AM+LWESMR+EN XXXXXXXX
Sbjct: 121 VALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDEAMELWESMRKENXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELFP 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEE+FP
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEEIFP 240

Query: 241 DQHVFDPPEEIFSLR 256
           DQHV+DPPEEIF LR
Sbjct: 241 DQHVYDPPEEIFGLR 255

[Close]
BLAST of MELO3C020598.2 vs. TAIR10
Match: AT3G46870.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 236.5 bits (602), Expect = 1.8e-62
Identity = 128/253 (50.59%), Postives = 159/253 (62.85%), Query Frame = 0 

Query: 2   AIRWFSRSKLPIFALVFLRGLTRRP-IRDVPLPVTSTITGFQPDSSRPIWGF-RLYHDGR 61
           AIR  SR K P FA +F + +TR P I  +        T   P   +P   F   +HDGR
Sbjct: 3   AIRVCSR-KFPTFASIFFQNITRNPSIHRISFSNLKPKTLLHPIPPKPFTVFVSRFHDGR 62

Query: 62  PRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQE 121
           PRGPLWR +K IGKEALFVI GLKR KED+EKL KF+K+HV RLLKLDMLAV+GELERQE
Sbjct: 63  PRGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQE 122

Query: 122 EVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXX 181
           E ALA+K+F +I+KQ+WY+PDV++YKDLI++LA+SK+MD+AM LWE M++ENL       
Sbjct: 123 ETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFPDSQTY 182

Query: 182 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELF 241
                                                       HPLLRN+VK+DFEELF
Sbjct: 183 TEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGLLPHPLLRNKVKKDFEELF 242

Query: 242 PDQHVFDPPEEIF 253
           P++H +DPPEEIF
Sbjct: 243 PEKHAYDPPEEIF 254

[Close]
BLAST of MELO3C020598.2 vs. TAIR10
Match: AT1G62350.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 116.7 bits (291), Expect = 2.1e-26
Identity = 59/181 (32.60%), Postives = 96/181 (53.04%), Query Frame = 0 

Query: 71  IGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEEVALAVKIFRL 130
           + KE L   + LKR +    +L +F+ SHVSRLLK D+++VL E +RQ +V L +K++ +
Sbjct: 1   MSKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEV 60

Query: 131 IRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXXXXXXXXXXXXX 190
           +R++ WY+PD++ Y+D+++ LAR+KK+D+  K+WE +++E +                  
Sbjct: 61  VRREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQHTFGDLVRGFLDNE 120

Query: 191 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELFPDQHVFDPPEE 250
                                            +P LR +VK DF ELFP   V+DPPE+
Sbjct: 121 LPLEAMRLYGEMRESPDRPLSLPFRVILKGLVPYPELREKVKDDFLELFPGMIVYDPPED 180

Query: 251 I 252
           I
Sbjct: 181 I 181

[Close]
BLAST of MELO3C020598.2 vs. TAIR10
Match: AT5G09320.1 (Vacuolar sorting protein 9 (VPS9) domain)

HSP 1 Score: 69.3 bits (168), Expect = 3.8e-12
Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 0 

Query: 92  LGKFMKSHVSRLLKLDMLAVLGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIAL 151
           L + + S   RLLK DM+AVL EL RQ E +LA+K+F  IRK+ WYKP V +Y D+I  +
Sbjct: 541 LDRVIISKFRRLLKFDMVAVLRELLRQNECSLALKVFEEIRKEYWYKPQVRMYTDMITVM 600

Query: 152 ARSKKMDDAMKLWESMREE 171
           A +  M++   L+ +M+ E
Sbjct: 601 ADNSLMEEVNYLYSAMKSE 619

[Close]
BLAST of MELO3C020598.2 vs. TAIR10
Match: AT3G27750.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 53.5 bits (127), Expect = 2.2e-07
Identity = 38/104 (36.54%), Postives = 60/104 (57.69%), Query Frame = 0 

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEE 120
           RGPL + R  +  EA+  IQ LKR       L   ++  + RL+K D+++VL EL RQ+ 
Sbjct: 39  RGPLLKGR-ILSTEAIQSIQSLKRAHRTGVSLSLTLRP-LRRLIKSDLISVLRELLRQDY 98

Query: 121 VALAVKIFRLIRKQDWYKP-DVYIYKDLIIALARSKKMDDAMKL 164
             LAV +   +R +  Y P D+ +Y D++ AL R+K+ D+  +L
Sbjct: 99  CTLAVHVLSTLRTE--YPPLDLVLYADIVNALTRNKEFDEIDRL 138

[Close]
BLAST of MELO3C020598.2 vs. TAIR10
Match: AT5G48730.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 45.8 bits (107), Expect = 4.5e-05
Identity = 32/105 (30.48%), Postives = 54/105 (51.43%), Query Frame = 0 

Query: 66  RSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEEVALAV 125
           ++ K   ++A+ +I   +  K   EK     K    +LL   +L  L E         A+
Sbjct: 80  KNTKIASRKAISIILRREATKSIIEK-----KKGSKKLLPRTVLESLHERITALRWESAI 139

Query: 126 KIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREE 171
           ++F L+R+Q WYKP+V IY  LI+ L + K+ + A +L++ M  E
Sbjct: 140 QVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINE 179

[Close]
BLAST of MELO3C020598.2 vs. Swiss-Prot
Match: sp|Q9STF9|THA8L_ARATH (Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THA8L PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.3e-61
Identity = 128/253 (50.59%), Postives = 159/253 (62.85%), Query Frame = 0 

Query: 2   AIRWFSRSKLPIFALVFLRGLTRRP-IRDVPLPVTSTITGFQPDSSRPIWGF-RLYHDGR 61
           AIR  SR K P FA +F + +TR P I  +        T   P   +P   F   +HDGR
Sbjct: 3   AIRVCSR-KFPTFASIFFQNITRNPSIHRISFSNLKPKTLLHPIPPKPFTVFVSRFHDGR 62

Query: 62  PRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQE 121
           PRGPLWR +K IGKEALFVI GLKR KED+EKL KF+K+HV RLLKLDMLAV+GELERQE
Sbjct: 63  PRGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQE 122

Query: 122 EVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXX 181
           E ALA+K+F +I+KQ+WY+PDV++YKDLI++LA+SK+MD+AM LWE M++ENL       
Sbjct: 123 ETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFPDSQTY 182

Query: 182 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELF 241
                                                       HPLLRN+VK+DFEELF
Sbjct: 183 TEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGLLPHPLLRNKVKKDFEELF 242

Query: 242 PDQHVFDPPEEIF 253
           P++H +DPPEEIF
Sbjct: 243 PEKHAYDPPEEIF 254

[Close]
BLAST of MELO3C020598.2 vs. Swiss-Prot
Match: sp|Q1PFH7|PPR89_ARATH (Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana OX=3702 GN=At1g62350 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.8e-25
Identity = 59/181 (32.60%), Postives = 96/181 (53.04%), Query Frame = 0 

Query: 71  IGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEEVALAVKIFRL 130
           + KE L   + LKR +    +L +F+ SHVSRLLK D+++VL E +RQ +V L +K++ +
Sbjct: 1   MSKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEV 60

Query: 131 IRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXXXXXXXXXXXXX 190
           +R++ WY+PD++ Y+D+++ LAR+KK+D+  K+WE +++E +                  
Sbjct: 61  VRREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQHTFGDLVRGFLDNE 120

Query: 191 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELFPDQHVFDPPEE 250
                                            +P LR +VK DF ELFP   V+DPPE+
Sbjct: 121 LPLEAMRLYGEMRESPDRPLSLPFRVILKGLVPYPELREKVKDDFLELFPGMIVYDPPED 180

Query: 251 I 252
           I
Sbjct: 181 I 181

[Close]
BLAST of MELO3C020598.2 vs. Swiss-Prot
Match: sp|Q9LVW6|THA8_ARATH (Protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THA8 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.9e-06
Identity = 38/104 (36.54%), Postives = 60/104 (57.69%), Query Frame = 0 

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEE 120
           RGPL + R  +  EA+  IQ LKR       L   ++  + RL+K D+++VL EL RQ+ 
Sbjct: 39  RGPLLKGR-ILSTEAIQSIQSLKRAHRTGVSLSLTLRP-LRRLIKSDLISVLRELLRQDY 98

Query: 121 VALAVKIFRLIRKQDWYKP-DVYIYKDLIIALARSKKMDDAMKL 164
             LAV +   +R +  Y P D+ +Y D++ AL R+K+ D+  +L
Sbjct: 99  CTLAVHVLSTLRTE--YPPLDLVLYADIVNALTRNKEFDEIDRL 138

[Close]
BLAST of MELO3C020598.2 vs. Swiss-Prot
Match: sp|Q9FKC3|PP424_ARATH (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g48730 PE=2 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 8.2e-04
Identity = 32/105 (30.48%), Postives = 54/105 (51.43%), Query Frame = 0 

Query: 66  RSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEEVALAV 125
           ++ K   ++A+ +I   +  K   EK     K    +LL   +L  L E         A+
Sbjct: 80  KNTKIASRKAISIILRREATKSIIEK-----KKGSKKLLPRTVLESLHERITALRWESAI 139

Query: 126 KIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREE 171
           ++F L+R+Q WYKP+V IY  LI+ L + K+ + A +L++ M  E
Sbjct: 140 QVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINE 179

[Close]
BLAST of MELO3C020598.2 vs. TrEMBL
Match: tr|A0A1S3C5H5|A0A1S3C5H5_CUCME (pentatricopeptide repeat-containing protein At3g46870 OS=Cucumis melo OX=3656 GN=LOC103497124 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 5.5e-106
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0 

Query: 1   MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRP 60
           MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRP
Sbjct: 1   MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEE 120
           RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEE
Sbjct: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEE 120

Query: 121 VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXXX 180
           VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXXX
Sbjct: 121 VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELFP 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELFP
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELFP 240

Query: 241 DQHVFDPPEEIFSLR 256
           DQHVFDPPEEIFSLR
Sbjct: 241 DQHVFDPPEEIFSLR 255

[Close]
BLAST of MELO3C020598.2 vs. TrEMBL
Match: tr|A0A0A0LVE9|A0A0A0LVE9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G525290 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 7.0e-101
Identity = 246/255 (96.47%), Postives = 249/255 (97.65%), Query Frame = 0 

Query: 1   MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRP 60
           MAIRWFSRSKLP+FA VFL+GLTRRPIRDVPLPV STIT FQPDS RPIWGFRLYHDGRP
Sbjct: 1   MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEE 120
           RGPLWRSRKAIGKEALFVIQGLKRFKEDEEK  KFMKSHVSRLLKLDM+AVLGELERQEE
Sbjct: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLDMVAVLGELERQEE 120

Query: 121 VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXXX 180
           VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXXX
Sbjct: 121 VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELFP 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELFP
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELFP 240

Query: 241 DQHVFDPPEEIFSLR 256
           DQHVFDPPEEIFSLR
Sbjct: 241 DQHVFDPPEEIFSLR 255

[Close]
BLAST of MELO3C020598.2 vs. TrEMBL
Match: tr|A0A2P6QJB5|A0A2P6QJB5_ROSCH (Putative pentatricopeptide OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0066921 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 4.7e-73
Identity = 142/252 (56.35%), Postives = 174/252 (69.05%), Query Frame = 0 

Query: 1   MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRP 60
           MAIR FSRSK P F+ + L+GL R PIR+ P P T +  G + +  +P+ GFRLYHDGRP
Sbjct: 1   MAIRAFSRSKFPTFSSILLQGLKRTPIRENPFPPTPSSPGLEIEPWKPVCGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEE 120
           RGPLWR +K IGKEAL+VI GLKRFK+DEE+LGKF+++HV RLLK+DM+AVL ELERQEE
Sbjct: 61  RGPLWRGKKLIGKEALYVISGLKRFKDDEERLGKFIQNHVLRLLKMDMIAVLTELERQEE 120

Query: 121 VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXXX 180
           V LA+K+F++IRKQDWYKP+VY+YKDLII+LA+SKKMDD M LWE M++E+L        
Sbjct: 121 VHLAIKVFKVIRKQDWYKPNVYLYKDLIISLAKSKKMDDVMLLWECMKKEDLFPDSQTYT 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELFP 240
                                                      HPLLRNRVKQDFEELFP
Sbjct: 181 EVIRGFLSSGSPADAMNIYEDMKQSPDPPEELPFRILLKGLLPHPLLRNRVKQDFEELFP 240

Query: 241 DQHVFDPPEEIF 253
           +QHV+DPP+EIF
Sbjct: 241 EQHVYDPPQEIF 252

[Close]
BLAST of MELO3C020598.2 vs. TrEMBL
Match: tr|M5W0S0|M5W0S0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G067500 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 8.9e-72
Identity = 144/255 (56.47%), Postives = 171/255 (67.06%), Query Frame = 0 

Query: 1   MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRP 60
           MA R FSRSK  IF+ + LRGL R   ++ PL     I   + +SS+PI GFRLYHDGRP
Sbjct: 1   MATRAFSRSKFAIFSSILLRGLKRTTTQETPLLRKFRIPESEIESSKPICGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEE 120
           RGPLWR +K IGKEAL+VI GLKRFK+DEEKLGKF+K+HV RLLK+D++AVL ELERQEE
Sbjct: 61  RGPLWRGKKLIGKEALYVISGLKRFKDDEEKLGKFIKNHVLRLLKMDLIAVLTELERQEE 120

Query: 121 VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXXX 180
           V LA+K+F +IRKQDWY PDVY+YKDLII+LARSKKMDD M LW+ M++E+L        
Sbjct: 121 VNLAIKVFNVIRKQDWYNPDVYLYKDLIISLARSKKMDDVMLLWDGMKKEDLFPDSQTYT 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELFP 240
                                                      HPLLRNRVKQDFEELFP
Sbjct: 181 EVIRGFLSSGSPADAMNIYEDMKNSPDPPEELPFRILLKGLLPHPLLRNRVKQDFEELFP 240

Query: 241 DQHVFDPPEEIFSLR 256
           +QHV+DPPEEIF +R
Sbjct: 241 EQHVYDPPEEIFGVR 255

[Close]
BLAST of MELO3C020598.2 vs. TrEMBL
Match: tr|A0A2P4ISK6|A0A2P4ISK6_QUESU (Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_34307 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 9.8e-71
Identity = 191/255 (74.90%), Postives = 220/255 (86.27%), Query Frame = 0 

Query: 1   MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRP 60
           MA R FSR K PI   + +R LTR  I+   LP+   +   +PD  +PI GF+LYHDGRP
Sbjct: 1   MATRAFSRLKTPICTSILIRNLTRTAIKHHSLPLKPKVAALEPDCCKPICGFKLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEE 120
           RGPLWR +K IGKEALFVI GLKRFK+DEEKL KF+K+HV RLLK+D++AVL ELERQEE
Sbjct: 61  RGPLWRGKKLIGKEALFVILGLKRFKDDEEKLEKFIKTHVLRLLKMDLIAVLSELERQEE 120

Query: 121 VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLXXXXXXXX 180
           VALAVK+F++IR+QDWY+PD ++YKDLIIALA+ +KMDDAM+LWE MR+EN XXXXXXXX
Sbjct: 121 VALAVKVFKVIRRQDWYRPDAFLYKDLIIALAKCQKMDDAMQLWEDMRKENXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLRNRVKQDFEELFP 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PLLRNRVKQDFEELFP
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLRNRVKQDFEELFP 240

Query: 241 DQHVFDPPEEIFSLR 256
           ++HV+DPPEEIF LR
Sbjct: 241 ERHVYDPPEEIFGLR 255

The following BLAST results are available for this feature:
BLAST of MELO3C020598.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008457435.18.4e-106100.00PREDICTED: pentatricopeptide repeat-containing protein At3g46870 [Cucumis melo][more]
XP_004145279.11.1e-10096.47PREDICTED: pentatricopeptide repeat-containing protein At3g46870 [Cucumis sativu... [more]
XP_022158131.11.1e-9291.37pentatricopeptide repeat-containing protein At3g46870 [Momordica charantia][more]
XP_022964699.16.4e-9087.84protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita moschata] >XP_022964... [more]
XP_023521051.11.4e-8987.45protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita pepo subsp. pepo] >X... [more]
BLAST of MELO3C020598.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G46870.11.8e-6250.59Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G62350.12.1e-2632.60Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G09320.13.8e-1245.57Vacuolar sorting protein 9 (VPS9) domain[more]
AT3G27750.12.2e-0736.54FUNCTIONS IN: molecular_function unknown[more]
AT5G48730.14.5e-0530.48Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of MELO3C020598.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9STF9|THA8L_ARATH3.3e-6150.59Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
sp|Q1PFH7|PPR89_ARATH3.8e-2532.60Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana OX... [more]
sp|Q9LVW6|THA8_ARATH3.9e-0636.54Protein THYLAKOID ASSEMBLY 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=T... [more]
sp|Q9FKC3|PP424_ARATH8.2e-0430.48Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop... [more]
BLAST of MELO3C020598.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C5H5|A0A1S3C5H5_CUCME5.5e-106100.00pentatricopeptide repeat-containing protein At3g46870 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A0A0LVE9|A0A0A0LVE9_CUCSA7.0e-10196.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G525290 PE=4 SV=1[more]
tr|A0A2P6QJB5|A0A2P6QJB5_ROSCH4.7e-7356.35Putative pentatricopeptide OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0066921 P... [more]
tr|M5W0S0|M5W0S0_PRUPE8.9e-7256.47Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G067500 PE=4 SV=1[more]
tr|A0A2P4ISK6|A0A2P4ISK6_QUESU9.8e-7174.90Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_3... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
biological_process GO:0008150 biological_process
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020598.2.1MELO3C020598.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 139..187
e-value: 2.3E-10
score: 40.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 178..210
e-value: 1.8E-5
score: 22.6
coord: 143..175
e-value: 3.2E-6
score: 24.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 175..209
score: 10.742
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 140..174
score: 11.126
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 69..255
e-value: 9.2E-53
score: 180.3
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..247
NoneNo IPR availablePANTHERPTHR24015:SF332SUBFAMILY NOT NAMEDcoord: 1..247

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C020598.2Csa1G525290Cucumber (Chinese Long) v2cumedB023
MELO3C020598.2CSPI01G23420Wild cucumber (PI 183967)cpimedB024
MELO3C020598.2Cucsa.146590Cucumber (Gy14) v1cgymedB240
MELO3C020598.2CmaCh13G001010Cucurbita maxima (Rimu)cmamedB215
MELO3C020598.2CmoCh13G001010Cucurbita moschata (Rifu)cmomedB203
MELO3C020598.2Lsi02G013280Bottle gourd (USVL1VR-Ls)lsimedB183
MELO3C020598.2Cp4.1LG20g08310Cucurbita pepo (Zucchini)cpemedB561
MELO3C020598.2Cp4.1LG00g03640Cucurbita pepo (Zucchini)cpemedB007
MELO3C020598.2CsGy1G022900Cucumber (Gy14) v2cgybmedB021
MELO3C020598.2Cla008208Watermelon (97103) v1medwmB143
MELO3C020598.2ClCG03G001190Watermelon (Charleston Gray)medwcgB141
MELO3C020598.2Cla97C03G052040Watermelon (97103) v2medwmbB142
MELO3C020598.2Bhi08G000477Wax gourdmedwgoB164
MELO3C020598.2Carg20634Silver-seed gourdcarmedB0392
MELO3C020598.2CsaV3_1G035710Cucumber (Chinese Long) v3cucmedB023
MELO3C020598.2CsaV3_1G034610Cucumber (Chinese Long) v3cucmedB028
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C020598.2Silver-seed gourdcarmedB0451
MELO3C020598.2Silver-seed gourdcarmedB0981
MELO3C020598.2Cucumber (Chinese Long) v3cucmedB174
MELO3C020598.2Watermelon (97103) v2medwmbB136
MELO3C020598.2Cucumber (Gy14) v2cgybmedB155
MELO3C020598.2Cucumber (Gy14) v2cgybmedB398
MELO3C020598.2Cucumber (Gy14) v1cgymedB219
MELO3C020598.2Cucumber (Gy14) v1cgymedB307
MELO3C020598.2Cucurbita maxima (Rimu)cmamedB246
MELO3C020598.2Cucurbita maxima (Rimu)cmamedB451
MELO3C020598.2Cucurbita maxima (Rimu)cmamedB850
MELO3C020598.2Cucurbita moschata (Rifu)cmomedB227
MELO3C020598.2Cucurbita moschata (Rifu)cmomedB439
MELO3C020598.2Cucurbita moschata (Rifu)cmomedB844
MELO3C020598.2Cucurbita pepo (Zucchini)cpemedB581
MELO3C020598.2Cucurbita pepo (Zucchini)cpemedB584
MELO3C020598.2Cucurbita pepo (Zucchini)cpemedB663
MELO3C020598.2Cucurbita pepo (Zucchini)cpemedB935
MELO3C020598.2Wild cucumber (PI 183967)cpimedB173
MELO3C020598.2Wild cucumber (PI 183967)cpimedB448
MELO3C020598.2Cucumber (Chinese Long) v2cumedB172
MELO3C020598.2Cucumber (Chinese Long) v2cumedB440
MELO3C020598.2Melon (DHL92) v3.6.1medmedB068
MELO3C020598.2Melon (DHL92) v3.6.1medmedB070
MELO3C020598.2Bottle gourd (USVL1VR-Ls)lsimedB258
MELO3C020598.2Bottle gourd (USVL1VR-Ls)lsimedB256
MELO3C020598.2Watermelon (Charleston Gray)medwcgB123
MELO3C020598.2Watermelon (97103) v1medwmB142
MELO3C020598.2Watermelon (97103) v1medwmB176