CmoCh13G001010 (gene) Cucurbita moschata (Rifu)

NameCmoCh13G001010
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPentatricopeptide repeat superfamily protein
LocationCmo_Chr13 : 567408 .. 569937 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATGCGGTGGTTTTCCAAGTTGAAGTTACCCATTTGTTATTCGGTATTCCTACGAGGTCTAATGAGGAGACCCATTAGAGATATCCCATTACCAGTAAAATCGACGGTTGCCGGATTTCAGCCGGATTCCAGCCGACCCTTAAGCGGATTCCGGCTATATCACGACGGGAGGCCGCGGGGACCCCTTTGGAGAAGCCGGAAAGCAATTGGGAAAGAAGCGCTTTTCGTTATTCAGGGATTGAAGAGATTCAAGGAAGATGAAGAGAAGCTCCAGAAGTTCATGAAATGTCATGTTTTGAGGCTCTTGAAATTGGACATGATTGCTGTGCTTGGTGAACTTGAGCGGCAGGAAGAGGTTGCTTTAGCCGTCAAGGTCTCTTTTCCCTTCCTTTTCTTCATTATGTTCTGTCATTTTTTGGGTTTTTAACTTTACTTCATGAGGTGCCATGGAAATAGATAACGAGCTTCTGCAAAATATACTTAATATTCCTGACTTACTCTTGTTTGTTGTCACTATTACTTTCAATAACCTTGTTGGTTAATGCTTTGAATTTTTGCTTCTTAATTGTTATGTTCATCTCTGATCTGCCCCTTTTGATTCATCAGGGTCTTCTTCATATATATATATATGATTTAAGATCTTGTATATGAACCCTTTTCCAATCTAGTTGCTTGTGGAAAATATGTTGTGAGATCCCACCTCGGTTGGGGAGGAGAATGAAGCATTCTTTATAAGGGTGTGGAAACCTTTCCCTAGCAGAAATCTTGAGGAGAAGCCCGAAAGGGAAAGCCCAAAAAGGACAATATTTGCTAGGAGTGGGGTTGGGTTGGGTTGTTACAAATAATATCAAAGCTAGACATCGGGCAATGTGCCAACAAGGACGCTAGGACTTGAAGGGGGTTGACATGAGGCGGTGTGCTAGCTAGGACGTTGGGCCCCGAATGGGGGTGGATTGGAAGCTCCACATCGATTGGAGAAAGGAACAAGTGTCAGCGAGGACGCTGGGCCTCAAAGGGTGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACAAAACATTCTTTATAAGGATGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGAGGGAAGCCCGAAAGGGAAAGCCCAAGGAGGATGTGCCAGCAAGGAGGCTGAGCCCTGAAGGGGGGTGGACATGAGGCGGTGTGTTAGCTAGGACGTTGGGCCCTGAATAGGGGTGGATTAGGGGTTCCACATCGATTGGAGAAAGGAACGAGTGCCAGCAAGGATGCTGGACCTCGAAGGGTGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACAAAACATTCTTTATAAGGATGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGAGGGAAGCCCGAAAGGGAAAGCCCAAGGAGGATGTGCCAGCAAGGAGGCTGAGCCCTGAAGGGGGGTGGACATGAGGCGGTGTGTTAGCTAGGACGTTGGGCCCTGAATAGGGGTGGATTAGGGGTTCCACATCGATTGGAGAAAGGAACGAGTGCCAGCAAGGATGCTGGACCTCGAAGGGTGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACAAAACATTCTTTATAAGGATGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGAGGGAAGCCCGAAAGGGAAAGCCCAAGGAGGATGTGCCAGCAAGGAGGCTGAGCCCTGAAGGGGGGTGGACATGAGGCGGTGTGTTAGCTAGGACGTTGGGCCCTGAATAGGGGTGGATTAGGGGTTCCACATCGATTGGAGAAAGGAACGAGTGCCAGCAAGGATGCTGGACCTCGAAGGGTGGTGGATTGTGAGATCTCACATCGGTTGGGGAGGAGAACGGAACATTTTTTATGAGGATGTGGAAACCTCTCCCTAGAAAACGCGTTTTAAAAACCTTGAGGGAAACCTAGAAGGAAAAGCCCAAAGAGGACAATATTTGCTAGCGATGGGTTTAGGCTATTACATATTTGCTTTTAGATTCTCTTACTTCATTGTTTTGGGGAATCTGACCTGCTGCAATTTTCTATTGTCATTATGTTTGCTCGCCTTGTACGCTTGTCGAACTTTCAGGTATTTCGGTTGATTCAAAAGCAAGAATGGTACAAGCCCGATGTTTTTCTCTACAAAGACTTGATTGTTGCATTAGCTAGAAGTAAACAGATGGATGATGCAATGGAATTATGGGAAAGCATGAGAAAGGAGAATTTATTCCCTGATTCTCAAACGTACACCGAAGTCATCAGAGGCTTCTTGAAATATGGATCTCCTTCTGATGCAATGAACATATATGAAGATATGAAGAAGTCTCCTGATCCACCAGATGAGTTGCCATTTAGAATTTTGTTGAAAGGACTTTTGCCACACCCCCTTTTGAGAAACAGAGTGAAGCAAGATTTCGAGGAGATCTTTCCTGACCAGCACGTGTACGATCCCCCGGAAGAGATATTCGGCCTACGCTGA

mRNA sequence

ATGGCAATGCGGTGGTTTTCCAAGTTGAAGTTACCCATTTGTTATTCGGTATTCCTACGAGGTCTAATGAGGAGACCCATTAGAGATATCCCATTACCAGTAAAATCGACGGTTGCCGGATTTCAGCCGGATTCCAGCCGACCCTTAAGCGGATTCCGGCTATATCACGACGGGAGGCCGCGGGGACCCCTTTGGAGAAGCCGGAAAGCAATTGGGAAAGAAGCGCTTTTCGTTATTCAGGGATTGAAGAGATTCAAGGAAGATGAAGAGAAGCTCCAGAAGTTCATGAAATGTCATGTTTTGAGGCTCTTGAAATTGGACATGATTGCTGTGCTTGGTGAACTTGAGCGGCAGGAAGAGGTTGCTTTAGCCGTCAAGGTATTTCGGTTGATTCAAAAGCAAGAATGGTACAAGCCCGATGTTTTTCTCTACAAAGACTTGATTGTTGCATTAGCTAGAAGTAAACAGATGGATGATGCAATGGAATTATGGGAAAGCATGAGAAAGGAGAATTTATTCCCTGATTCTCAAACGTACACCGAAGTCATCAGAGGCTTCTTGAAATATGGATCTCCTTCTGATGCAATGAACATATATGAAGATATGAAGAAGTCTCCTGATCCACCAGATGAGTTGCCATTTAGAATTTTGTTGAAAGGACTTTTGCCACACCCCCTTTTGAGAAACAGAGTGAAGCAAGATTTCGAGGAGATCTTTCCTGACCAGCACGTGTACGATCCCCCGGAAGAGATATTCGGCCTACGCTGA

Coding sequence (CDS)

ATGGCAATGCGGTGGTTTTCCAAGTTGAAGTTACCCATTTGTTATTCGGTATTCCTACGAGGTCTAATGAGGAGACCCATTAGAGATATCCCATTACCAGTAAAATCGACGGTTGCCGGATTTCAGCCGGATTCCAGCCGACCCTTAAGCGGATTCCGGCTATATCACGACGGGAGGCCGCGGGGACCCCTTTGGAGAAGCCGGAAAGCAATTGGGAAAGAAGCGCTTTTCGTTATTCAGGGATTGAAGAGATTCAAGGAAGATGAAGAGAAGCTCCAGAAGTTCATGAAATGTCATGTTTTGAGGCTCTTGAAATTGGACATGATTGCTGTGCTTGGTGAACTTGAGCGGCAGGAAGAGGTTGCTTTAGCCGTCAAGGTATTTCGGTTGATTCAAAAGCAAGAATGGTACAAGCCCGATGTTTTTCTCTACAAAGACTTGATTGTTGCATTAGCTAGAAGTAAACAGATGGATGATGCAATGGAATTATGGGAAAGCATGAGAAAGGAGAATTTATTCCCTGATTCTCAAACGTACACCGAAGTCATCAGAGGCTTCTTGAAATATGGATCTCCTTCTGATGCAATGAACATATATGAAGATATGAAGAAGTCTCCTGATCCACCAGATGAGTTGCCATTTAGAATTTTGTTGAAAGGACTTTTGCCACACCCCCTTTTGAGAAACAGAGTGAAGCAAGATTTCGAGGAGATCTTTCCTGACCAGCACGTGTACGATCCCCCGGAAGAGATATTCGGCCTACGCTGA
BLAST of CmoCh13G001010 vs. Swiss-Prot
Match: PP266_ARATH (Pentatricopeptide repeat-containing protein At3g46870 OS=Arabidopsis thaliana GN=At3g46870 PE=1 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 4.5e-95
Identity = 169/246 (68.70%), Postives = 200/246 (81.30%), Query Frame = 1

Query: 10  KLPICYSVFLRGLMRRP-IRDIPLPVKSTVAGFQPDSSRPLSGF-RLYHDGRPRGPLWRS 69
           K P   S+F + + R P I  I            P   +P + F   +HDGRPRGPLWR 
Sbjct: 10  KFPTFASIFFQNITRNPSIHRISFSNLKPKTLLHPIPPKPFTVFVSRFHDGRPRGPLWRG 69

Query: 70  RKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEEVALAVKV 129
           +K IGKEALFVI GLKR KED+EKL KF+K HV RLLKLDM+AV+GELERQEE ALA+K+
Sbjct: 70  KKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQEETALAIKM 129

Query: 130 FRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFL 189
           F +IQKQEWY+PDVF+YKDLIV+LA+SK+MD+AM LWE M+KENLFPDSQTYTEVIRGFL
Sbjct: 130 FEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFPDSQTYTEVIRGFL 189

Query: 190 KYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDP 249
           + G P+DAMN+YEDM KSPDPP+ELPFR+LLKGLLPHPLLRN+VK+DFEE+FP++H YDP
Sbjct: 190 RDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGLLPHPLLRNKVKKDFEELFPEKHAYDP 249

Query: 250 PEEIFG 254
           PEEIFG
Sbjct: 250 PEEIFG 255

BLAST of CmoCh13G001010 vs. Swiss-Prot
Match: PPR89_ARATH (Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana GN=At1g62350 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 5.5e-45
Identity = 80/181 (44.20%), Postives = 130/181 (71.82%), Query Frame = 1

Query: 71  IGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEEVALAVKVFRL 130
           + KE L   + LKR +    +L +F+  HV RLLK D+++VL E +RQ +V L +K++ +
Sbjct: 1   MSKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEV 60

Query: 131 IQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYG 190
           ++++ WY+PD+F Y+D+++ LAR+K++D+  ++WE ++KE +  D  T+ +++RGFL   
Sbjct: 61  VRREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQHTFGDLVRGFLDNE 120

Query: 191 SPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEE 250
            P +AM +Y +M++SPD P  LPFR++LKGL+P+P LR +VK DF E+FP   VYDPPE+
Sbjct: 121 LPLEAMRLYGEMRESPDRPLSLPFRVILKGLVPYPELREKVKDDFLELFPGMIVYDPPED 180

Query: 251 I 252
           I
Sbjct: 181 I 181

BLAST of CmoCh13G001010 vs. Swiss-Prot
Match: PP424_ARATH (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana GN=At5g48730 PE=2 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 9.8e-10
Identity = 36/100 (36.00%), Postives = 57/100 (57.00%), Query Frame = 1

Query: 124 AVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVI 183
           A++VF L+++Q WYKP+V +Y  LIV L + KQ + A EL++ M  E    + + YT ++
Sbjct: 133 AIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALV 192

Query: 184 RGFLKYGSPSDAMNIYEDMKKSPD-PPDELPFRILLKGLL 223
             + + G    A  + E MK S +  PD   + IL+K  L
Sbjct: 193 SAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFL 232

BLAST of CmoCh13G001010 vs. Swiss-Prot
Match: PP376_ARATH (Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.4e-09
Identity = 35/102 (34.31%), Postives = 54/102 (52.94%), Query Frame = 1

Query: 120 EVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTY 179
           +V   +++F  ++    Y P VF+Y  LI  L + K+M+DA +L++ M    L P   TY
Sbjct: 194 DVGKGLELFNRMKHDRIY-PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITY 253

Query: 180 TEVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGL 222
             +I G+ K G+P  +  + E MK     P  + F  LLKGL
Sbjct: 254 NTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGL 294

BLAST of CmoCh13G001010 vs. Swiss-Prot
Match: RF1_ORYSI (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.4e-08
Identity = 26/80 (32.50%), Postives = 44/80 (55.00%), Query Frame = 1

Query: 139 PDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYGSPSDAMNI 198
           PDV  Y  +I AL +++ MD AME+  +M K  + PD  TY  ++ G+   G P +A+  
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288

Query: 199 YEDMKKSPDPPDELPFRILL 219
            + M+     PD + + +L+
Sbjct: 289 LKKMRSDGVEPDVVTYSLLM 308

BLAST of CmoCh13G001010 vs. TrEMBL
Match: A0A0A0LVE9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G525290 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 3.6e-128
Identity = 221/255 (86.67%), Postives = 243/255 (95.29%), Query Frame = 1

Query: 1   MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRP 60
           MA+RWFS+ KLP+  SVFL+GL RRPIRD+PLPVKST+  FQPDS RP+ GFRLYHDGRP
Sbjct: 1   MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEE 120
           RGPLWRSRKAIGKEALFVIQGLKRFKEDEEK +KFMK HV RLLKLDM+AVLGELERQEE
Sbjct: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLDMVAVLGELERQEE 120

Query: 121 VALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYT 180
           VALAVK+FRLI+KQ+WYKPDV++YKDLI+ALARSK+MDDAM+LWESMR+ENLFPDSQTYT
Sbjct: 121 VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYT 180

Query: 181 EVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFP 240
           EVIRGFL+YGSPSDAMN+YEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEE+FP
Sbjct: 181 EVIRGFLRYGSPSDAMNVYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFP 240

Query: 241 DQHVYDPPEEIFGLR 256
           DQHV+DPPEEIF LR
Sbjct: 241 DQHVFDPPEEIFSLR 255

BLAST of CmoCh13G001010 vs. TrEMBL
Match: M5W0S0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010266mg PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 2.8e-104
Identity = 187/255 (73.33%), Postives = 218/255 (85.49%), Query Frame = 1

Query: 1   MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRP 60
           MA R FS+ K  I  S+ LRGL R   ++ PL  K  +   + +SS+P+ GFRLYHDGRP
Sbjct: 1   MATRAFSRSKFAIFSSILLRGLKRTTTQETPLLRKFRIPESEIESSKPICGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEE 120
           RGPLWR +K IGKEAL+VI GLKRFK+DEEKL KF+K HVLRLLK+D+IAVL ELERQEE
Sbjct: 61  RGPLWRGKKLIGKEALYVISGLKRFKDDEEKLGKFIKNHVLRLLKMDLIAVLTELERQEE 120

Query: 121 VALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYT 180
           V LA+KVF +I+KQ+WY PDV+LYKDLI++LARSK+MDD M LW+ M+KE+LFPDSQTYT
Sbjct: 121 VNLAIKVFNVIRKQDWYNPDVYLYKDLIISLARSKKMDDVMLLWDGMKKEDLFPDSQTYT 180

Query: 181 EVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFP 240
           EVIRGFL  GSP+DAMNIYEDMK SPDPP+ELPFRILLKGLLPHPLLRNRVKQDFEE+FP
Sbjct: 181 EVIRGFLSSGSPADAMNIYEDMKNSPDPPEELPFRILLKGLLPHPLLRNRVKQDFEELFP 240

Query: 241 DQHVYDPPEEIFGLR 256
           +QHVYDPPEEIFG+R
Sbjct: 241 EQHVYDPPEEIFGVR 255

BLAST of CmoCh13G001010 vs. TrEMBL
Match: A0A0B0MH77_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_18987 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 8.2e-104
Identity = 183/253 (72.33%), Postives = 217/253 (85.77%), Query Frame = 1

Query: 1   MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRP 60
           MA R FSK K PI  S+ L+ L +      P  VK  +   QPD  +P+SGF+LYHDGRP
Sbjct: 1   MATRAFSKSKFPILTSILLQNLTKNSTTRSPFLVKPEIPPVQPDIHKPISGFKLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEE 120
           RGPLW+ +K IGKEALFVI GLKRFK+DE+K+ KF+K HVLRLLK+D+IAVL ELERQEE
Sbjct: 61  RGPLWKGKKLIGKEALFVILGLKRFKDDEDKVLKFIKTHVLRLLKMDLIAVLSELERQEE 120

Query: 121 VALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYT 180
            +LAVKVF +IQKQ+WYKPDV+LYKDLI+ALA+ ++MD+AM+LWESMRKENLFPDSQTYT
Sbjct: 121 TSLAVKVFEVIQKQDWYKPDVYLYKDLIIALAKCRKMDEAMKLWESMRKENLFPDSQTYT 180

Query: 181 EVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFP 240
           E+IRGFL+ GSP+DAMNIYEDM KSPDPP+ELPFRILLKGLLPHPLLRN+VK+DFEE+FP
Sbjct: 181 EIIRGFLRDGSPADAMNIYEDMIKSPDPPEELPFRILLKGLLPHPLLRNKVKKDFEELFP 240

Query: 241 DQHVYDPPEEIFG 254
           ++H YDPPEEIFG
Sbjct: 241 EKHAYDPPEEIFG 253

BLAST of CmoCh13G001010 vs. TrEMBL
Match: D7SK67_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g05640 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 1.1e-103
Identity = 189/257 (73.54%), Postives = 223/257 (86.77%), Query Frame = 1

Query: 1   MAMRWFSKLKLPICYSVFLRGLMRRPIRD---IPLPVKSTVAGFQPDSSRPLSGFRLYHD 60
           MA+R FS+ K+PI  +  L+ L++ PI++      PV       +  S +PL G +LYHD
Sbjct: 1   MAIRAFSRSKIPIFSAKILQNLIKAPIKESTRFQFPV------LEVGSYKPLLGSKLYHD 60

Query: 61  GRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELER 120
           GRPRGPLWR +K IGKEALFVI GLKRFK+DEE L+KF+K HVLRLLK+DM+AVL ELER
Sbjct: 61  GRPRGPLWRGKKLIGKEALFVILGLKRFKDDEENLRKFIKSHVLRLLKMDMVAVLTELER 120

Query: 121 QEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQ 180
           QEEV+LAV+VFR+I+KQ+WYKPDV+LYKDLI+ALA+ K+MDDAM+LWESMRKE+LFPD Q
Sbjct: 121 QEEVSLAVEVFRVIRKQDWYKPDVYLYKDLIIALAKCKKMDDAMQLWESMRKEDLFPDYQ 180

Query: 181 TYTEVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEE 240
           TYTEVIRGFL+YGSP+DAMNIYEDMKKSPDPP+ELPFRILLKGLLPHPLLRNRVKQDFEE
Sbjct: 181 TYTEVIRGFLRYGSPADAMNIYEDMKKSPDPPEELPFRILLKGLLPHPLLRNRVKQDFEE 240

Query: 241 IFPDQHVYDPPEEIFGL 255
           IFPD+HVYDPPEEIFG+
Sbjct: 241 IFPDRHVYDPPEEIFGV 251

BLAST of CmoCh13G001010 vs. TrEMBL
Match: D7SJL5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g07800 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 1.4e-103
Identity = 187/254 (73.62%), Postives = 221/254 (87.01%), Query Frame = 1

Query: 1   MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRP 60
           MA+R FS+ K+PI  +  L+ L++ PI++     K      +  S++PL G + YHDGRP
Sbjct: 1   MAIRAFSRSKIPIFSAKILQSLIKSPIKE---STKFQFPVLEVASNKPLFGLKHYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEE 120
           RGPLWR +K IGKEALFVI GLKRFK+DEEKL+KF+K HVLRLLK+DMIAVL ELERQEE
Sbjct: 61  RGPLWRGKKLIGKEALFVILGLKRFKDDEEKLRKFIKSHVLRLLKMDMIAVLTELERQEE 120

Query: 121 VALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYT 180
           V LAV+VFR+ QKQ+WYKPDV+LYKDLI+ALA+ K+MD+AM+LWESMRKE+LFPD QTYT
Sbjct: 121 VTLAVEVFRVFQKQDWYKPDVYLYKDLIIALAKCKKMDNAMQLWESMRKEDLFPDYQTYT 180

Query: 181 EVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFP 240
           EVIRGFL++GSP+DAMNIYEDMKKSPDPP+ELPFRILLKGLLPHPLLRNRVKQDFEEIFP
Sbjct: 181 EVIRGFLRHGSPADAMNIYEDMKKSPDPPEELPFRILLKGLLPHPLLRNRVKQDFEEIFP 240

Query: 241 DQHVYDPPEEIFGL 255
           D+HVYDPPEEIFG+
Sbjct: 241 DRHVYDPPEEIFGI 251

BLAST of CmoCh13G001010 vs. TAIR10
Match: AT3G46870.1 (AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 349.0 bits (894), Expect = 2.5e-96
Identity = 169/246 (68.70%), Postives = 200/246 (81.30%), Query Frame = 1

Query: 10  KLPICYSVFLRGLMRRP-IRDIPLPVKSTVAGFQPDSSRPLSGF-RLYHDGRPRGPLWRS 69
           K P   S+F + + R P I  I            P   +P + F   +HDGRPRGPLWR 
Sbjct: 10  KFPTFASIFFQNITRNPSIHRISFSNLKPKTLLHPIPPKPFTVFVSRFHDGRPRGPLWRG 69

Query: 70  RKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEEVALAVKV 129
           +K IGKEALFVI GLKR KED+EKL KF+K HV RLLKLDM+AV+GELERQEE ALA+K+
Sbjct: 70  KKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQEETALAIKM 129

Query: 130 FRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFL 189
           F +IQKQEWY+PDVF+YKDLIV+LA+SK+MD+AM LWE M+KENLFPDSQTYTEVIRGFL
Sbjct: 130 FEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFPDSQTYTEVIRGFL 189

Query: 190 KYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDP 249
           + G P+DAMN+YEDM KSPDPP+ELPFR+LLKGLLPHPLLRN+VK+DFEE+FP++H YDP
Sbjct: 190 RDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGLLPHPLLRNKVKKDFEELFPEKHAYDP 249

Query: 250 PEEIFG 254
           PEEIFG
Sbjct: 250 PEEIFG 255

BLAST of CmoCh13G001010 vs. TAIR10
Match: AT1G62350.1 (AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 182.6 bits (462), Expect = 3.1e-46
Identity = 80/181 (44.20%), Postives = 130/181 (71.82%), Query Frame = 1

Query: 71  IGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEEVALAVKVFRL 130
           + KE L   + LKR +    +L +F+  HV RLLK D+++VL E +RQ +V L +K++ +
Sbjct: 1   MSKEGLIAAKELKRLQTQSVRLDRFIGSHVSRLLKSDLVSVLAEFQRQNQVFLCMKLYEV 60

Query: 131 IQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVIRGFLKYG 190
           ++++ WY+PD+F Y+D+++ LAR+K++D+  ++WE ++KE +  D  T+ +++RGFL   
Sbjct: 61  VRREIWYRPDMFFYRDMLMMLARNKKVDETKKVWEDLKKEEVLFDQHTFGDLVRGFLDNE 120

Query: 191 SPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFPDQHVYDPPEE 250
            P +AM +Y +M++SPD P  LPFR++LKGL+P+P LR +VK DF E+FP   VYDPPE+
Sbjct: 121 LPLEAMRLYGEMRESPDRPLSLPFRVILKGLVPYPELREKVKDDFLELFPGMIVYDPPED 180

Query: 251 I 252
           I
Sbjct: 181 I 181

BLAST of CmoCh13G001010 vs. TAIR10
Match: AT5G09320.1 (AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain)

HSP 1 Score: 80.5 bits (197), Expect = 1.7e-15
Identity = 58/177 (32.77%), Postives = 87/177 (49.15%), Query Frame = 1

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFK---------------EDEEKLQKFMKCHVLRLLK 120
           R PL R R  +  EA+  +Q LKR                      L + +     RLLK
Sbjct: 496 RKPLQRGRM-LSIEAIQAVQALKRANPLLPPPPVPSTSTTSSSSALLDRVIISKFRRLLK 555

Query: 121 LDMIAVLGELERQEEVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWE 180
            DM+AVL EL RQ E +LA+KVF  I+K+ WYKP V +Y D+I  +A +  M++   L+ 
Sbjct: 556 FDMVAVLRELLRQNECSLALKVFEEIRKEYWYKPQVRMYTDMITVMADNSLMEEVNYLYS 615

Query: 181 SMRKE-NLFPDSQTYTEVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGL 222
           +M+ E  L  + + +  ++   L +      M+ Y  M+     PD   FR+L+ GL
Sbjct: 616 AMKSEKGLMAEIEWFNTLLTILLNHKLFDLVMDCYAFMQSIGYEPDRASFRVLVLGL 671

BLAST of CmoCh13G001010 vs. TAIR10
Match: AT5G48730.1 (AT5G48730.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 65.5 bits (158), Expect = 5.5e-11
Identity = 36/100 (36.00%), Postives = 57/100 (57.00%), Query Frame = 1

Query: 124 AVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYTEVI 183
           A++VF L+++Q WYKP+V +Y  LIV L + KQ + A EL++ M  E    + + YT ++
Sbjct: 133 AIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALV 192

Query: 184 RGFLKYGSPSDAMNIYEDMKKSPD-PPDELPFRILLKGLL 223
             + + G    A  + E MK S +  PD   + IL+K  L
Sbjct: 193 SAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFL 232

BLAST of CmoCh13G001010 vs. TAIR10
Match: AT5G12100.1 (AT5G12100.1 pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 62.8 bits (151), Expect = 3.6e-10
Identity = 35/102 (34.31%), Postives = 54/102 (52.94%), Query Frame = 1

Query: 120 EVALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTY 179
           +V   +++F  ++    Y P VF+Y  LI  L + K+M+DA +L++ M    L P   TY
Sbjct: 194 DVGKGLELFNRMKHDRIY-PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITY 253

Query: 180 TEVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGL 222
             +I G+ K G+P  +  + E MK     P  + F  LLKGL
Sbjct: 254 NTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGL 294

BLAST of CmoCh13G001010 vs. NCBI nr
Match: gi|449455076|ref|XP_004145279.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g46870 [Cucumis sativus])

HSP 1 Score: 465.7 bits (1197), Expect = 5.2e-128
Identity = 221/255 (86.67%), Postives = 243/255 (95.29%), Query Frame = 1

Query: 1   MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRP 60
           MA+RWFS+ KLP+  SVFL+GL RRPIRD+PLPVKST+  FQPDS RP+ GFRLYHDGRP
Sbjct: 1   MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPDSRRPIWGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEE 120
           RGPLWRSRKAIGKEALFVIQGLKRFKEDEEK +KFMK HV RLLKLDM+AVLGELERQEE
Sbjct: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLDMVAVLGELERQEE 120

Query: 121 VALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYT 180
           VALAVK+FRLI+KQ+WYKPDV++YKDLI+ALARSK+MDDAM+LWESMR+ENLFPDSQTYT
Sbjct: 121 VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYT 180

Query: 181 EVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFP 240
           EVIRGFL+YGSPSDAMN+YEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEE+FP
Sbjct: 181 EVIRGFLRYGSPSDAMNVYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEELFP 240

Query: 241 DQHVYDPPEEIFGLR 256
           DQHV+DPPEEIF LR
Sbjct: 241 DQHVFDPPEEIFSLR 255

BLAST of CmoCh13G001010 vs. NCBI nr
Match: gi|659115195|ref|XP_008457435.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g46870 [Cucumis melo])

HSP 1 Score: 465.7 bits (1197), Expect = 5.2e-128
Identity = 223/255 (87.45%), Postives = 243/255 (95.29%), Query Frame = 1

Query: 1   MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRP 60
           MA+RWFS+ KLPI   VFLRGL RRPIRD+PLPV ST+ GFQPDSSRP+ GFRLYHDGRP
Sbjct: 1   MAIRWFSRSKLPIFALVFLRGLTRRPIRDVPLPVTSTITGFQPDSSRPIWGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEE 120
           RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKL KFMK HV RLLKLDM+AVLGELERQEE
Sbjct: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLGKFMKSHVSRLLKLDMLAVLGELERQEE 120

Query: 121 VALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYT 180
           VALAVK+FRLI+KQ+WYKPDV++YKDLI+ALARSK+MDDAM+LWESMR+ENLFPDSQTYT
Sbjct: 121 VALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREENLFPDSQTYT 180

Query: 181 EVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFP 240
           EVIRGFL+YGSPSDAMN+YEDMKKSP+PPDELPFRILLKGLLPHPLLRNRVKQDFEE+FP
Sbjct: 181 EVIRGFLRYGSPSDAMNVYEDMKKSPEPPDELPFRILLKGLLPHPLLRNRVKQDFEELFP 240

Query: 241 DQHVYDPPEEIFGLR 256
           DQHV+DPPEEIF LR
Sbjct: 241 DQHVFDPPEEIFSLR 255

BLAST of CmoCh13G001010 vs. NCBI nr
Match: gi|1009114783|ref|XP_015873874.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g46870 [Ziziphus jujuba])

HSP 1 Score: 394.4 bits (1012), Expect = 1.5e-106
Identity = 185/255 (72.55%), Postives = 220/255 (86.27%), Query Frame = 1

Query: 1   MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRP 60
           M +   ++ K+P+  S+ LR L R PI+ + LP++S +  F+  S +P++GFRLYHDGRP
Sbjct: 1   MVLHAITRSKIPVLTSIVLRLLYRAPIKQLSLPLRSNILAFETVSLKPIAGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEE 120
           RGPLWR +K IGKEA+FVI GLKRFK+DEEKL+KF+K HV RLLK+DMIAVL ELERQEE
Sbjct: 61  RGPLWRGKKLIGKEAIFVILGLKRFKDDEEKLEKFIKTHVTRLLKMDMIAVLTELERQEE 120

Query: 121 VALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYT 180
           V LA K+F LIQKQ+WYKPDV+LYKDLI+ALAR K+MD+ M+LWE MRKE+LFPDSQTYT
Sbjct: 121 VVLASKIFGLIQKQDWYKPDVYLYKDLIIALARRKKMDEVMQLWEKMRKEDLFPDSQTYT 180

Query: 181 EVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFP 240
           E+IRGFL  GSP DAMNIYEDMK SPDPP+ELPFRILLKGLLPHPLLRNRVKQDFEE+FP
Sbjct: 181 EIIRGFLSSGSPGDAMNIYEDMKNSPDPPEELPFRILLKGLLPHPLLRNRVKQDFEELFP 240

Query: 241 DQHVYDPPEEIFGLR 256
           ++HVYDPPEEIFG+R
Sbjct: 241 EKHVYDPPEEIFGIR 255

BLAST of CmoCh13G001010 vs. NCBI nr
Match: gi|657987696|ref|XP_008386010.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g46870-like [Malus domestica])

HSP 1 Score: 389.4 bits (999), Expect = 4.8e-105
Identity = 189/255 (74.12%), Postives = 219/255 (85.88%), Query Frame = 1

Query: 1   MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRP 60
           MA R FS+ K     SV L+ L   PI+  PL + ST+   +  S RP+SGFRLYHDGRP
Sbjct: 1   MATRAFSRSKSSFFSSVLLQNLKTTPIKTTPLLLNSTIPELEIKSCRPISGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEE 120
           RGPLWR +K IGKEALFVI GLKRFK++EEKL KF+K HVLRLLK+DMIAVL ELERQEE
Sbjct: 61  RGPLWRGKKLIGKEALFVISGLKRFKDNEEKLGKFVKTHVLRLLKMDMIAVLTELERQEE 120

Query: 121 VALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYT 180
           VALA+KVF +I++Q+WYKPDV+LYKDLI+ALARSK+M+D M LW+ M+KE+LFPDSQTYT
Sbjct: 121 VALAIKVFNVIRRQDWYKPDVYLYKDLIIALARSKKMEDVMLLWDIMKKEDLFPDSQTYT 180

Query: 181 EVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFP 240
           EVIRGFL  G P+DAMNIYEDMK+SPDPP+ELPFRILLKGLLPHPLLRNRVKQDFEE+FP
Sbjct: 181 EVIRGFLNSGCPADAMNIYEDMKQSPDPPEELPFRILLKGLLPHPLLRNRVKQDFEELFP 240

Query: 241 DQHVYDPPEEIFGLR 256
           +QHVYDPPEEIFG+R
Sbjct: 241 EQHVYDPPEEIFGMR 255

BLAST of CmoCh13G001010 vs. NCBI nr
Match: gi|595828842|ref|XP_007205757.1| (hypothetical protein PRUPE_ppa010266mg [Prunus persica])

HSP 1 Score: 386.3 bits (991), Expect = 4.0e-104
Identity = 187/255 (73.33%), Postives = 218/255 (85.49%), Query Frame = 1

Query: 1   MAMRWFSKLKLPICYSVFLRGLMRRPIRDIPLPVKSTVAGFQPDSSRPLSGFRLYHDGRP 60
           MA R FS+ K  I  S+ LRGL R   ++ PL  K  +   + +SS+P+ GFRLYHDGRP
Sbjct: 1   MATRAFSRSKFAIFSSILLRGLKRTTTQETPLLRKFRIPESEIESSKPICGFRLYHDGRP 60

Query: 61  RGPLWRSRKAIGKEALFVIQGLKRFKEDEEKLQKFMKCHVLRLLKLDMIAVLGELERQEE 120
           RGPLWR +K IGKEAL+VI GLKRFK+DEEKL KF+K HVLRLLK+D+IAVL ELERQEE
Sbjct: 61  RGPLWRGKKLIGKEALYVISGLKRFKDDEEKLGKFIKNHVLRLLKMDLIAVLTELERQEE 120

Query: 121 VALAVKVFRLIQKQEWYKPDVFLYKDLIVALARSKQMDDAMELWESMRKENLFPDSQTYT 180
           V LA+KVF +I+KQ+WY PDV+LYKDLI++LARSK+MDD M LW+ M+KE+LFPDSQTYT
Sbjct: 121 VNLAIKVFNVIRKQDWYNPDVYLYKDLIISLARSKKMDDVMLLWDGMKKEDLFPDSQTYT 180

Query: 181 EVIRGFLKYGSPSDAMNIYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRVKQDFEEIFP 240
           EVIRGFL  GSP+DAMNIYEDMK SPDPP+ELPFRILLKGLLPHPLLRNRVKQDFEE+FP
Sbjct: 181 EVIRGFLSSGSPADAMNIYEDMKNSPDPPEELPFRILLKGLLPHPLLRNRVKQDFEELFP 240

Query: 241 DQHVYDPPEEIFGLR 256
           +QHVYDPPEEIFG+R
Sbjct: 241 EQHVYDPPEEIFGVR 255

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP266_ARATH4.5e-9568.70Pentatricopeptide repeat-containing protein At3g46870 OS=Arabidopsis thaliana GN... [more]
PPR89_ARATH5.5e-4544.20Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana GN... [more]
PP424_ARATH9.8e-1036.00Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop... [more]
PP376_ARATH6.4e-0934.31Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidop... [more]
RF1_ORYSI2.4e-0832.50Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LVE9_CUCSA3.6e-12886.67Uncharacterized protein OS=Cucumis sativus GN=Csa_1G525290 PE=4 SV=1[more]
M5W0S0_PRUPE2.8e-10473.33Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010266mg PE=4 SV=1[more]
A0A0B0MH77_GOSAR8.2e-10472.33Uncharacterized protein OS=Gossypium arboreum GN=F383_18987 PE=4 SV=1[more]
D7SK67_VITVI1.1e-10373.54Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g05640 PE=4 SV=... [more]
D7SJL5_VITVI1.4e-10373.62Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g07800 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT3G46870.12.5e-9668.70 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G62350.13.1e-4644.20 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G09320.11.7e-1532.77 Vacuolar sorting protein 9 (VPS9) domain[more]
AT5G48730.15.5e-1136.00 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G12100.13.6e-1034.31 pentatricopeptide (PPR) repeat-containing protein[more]
Match NameE-valueIdentityDescription
gi|449455076|ref|XP_004145279.1|5.2e-12886.67PREDICTED: pentatricopeptide repeat-containing protein At3g46870 [Cucumis sativu... [more]
gi|659115195|ref|XP_008457435.1|5.2e-12887.45PREDICTED: pentatricopeptide repeat-containing protein At3g46870 [Cucumis melo][more]
gi|1009114783|ref|XP_015873874.1|1.5e-10672.55PREDICTED: pentatricopeptide repeat-containing protein At3g46870 [Ziziphus jujub... [more]
gi|657987696|ref|XP_008386010.1|4.8e-10574.12PREDICTED: pentatricopeptide repeat-containing protein At3g46870-like [Malus dom... [more]
gi|595828842|ref|XP_007205757.1|4.0e-10473.33hypothetical protein PRUPE_ppa010266mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh13G001010.1CmoCh13G001010.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 139..188
score: 2.4
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 146..175
score: 6.7E-6coord: 178..205
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 140..174
score: 11.17coord: 175..209
score: 10
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 17..246
score: 2.5E
NoneNo IPR availablePANTHERPTHR24015:SF332SUBFAMILY NOT NAMEDcoord: 17..246
score: 2.5E

The following gene(s) are paralogous to this gene:

None