MELO3C019422 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C019422
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	ATP-dependent RNA helicase, putative
Location	chr6 : 9480801 .. 9481179 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGAAAGATTAAATGAGCATGTTATTGATTATGATCTTCTCGAAGATTTAGTGATTCATGTGGATAAAACTTTTGATGAGGGAGCCATACTTGTTTTCTTGCCAGTAAGTTATTGTTGTTCTCTGCATTTTTATTTTTATTAGTATTGCTTTTTATTTTTTTTAACTTCAAAACTGTTTCGCATAACAGGGAGTGTCAGAAATTCACTTGTTGTATGATAGATTAGCTGCTTCTTACCAATTTGGTGGACAGGCTTCTGATTGGATTCTTCCTTTGCATTCGTCCATTGCATCTACTGATCAAAAAAAGGTGTTTTTACGGCCTCCTTATGGCATCCGCAAGGCAAGTTTTGTAACATACAGGGGCTACTTCTAA

mRNA sequence

ATGCAGGAAAGATTAAATGAGCATGTTATTGATTATGATCTTCTCGAAGATTTAGTGATTCATGTGGATAAAACTTTTGATGAGGGAGCCATACTTGTTTTCTTGCCAGGAGTGTCAGAAATTCACTTGTTGTATGATAGATTAGCTGCTTCTTACCAATTTGGTGGACAGGCTTCTGATTGGATTCTTCCTTTGCATTCGTCCATTGCATCTACTGATCAAAAAAAGGTGTTTTTACGGCCTCCTTATGGCATCCGCAAGGCAAGTTTTGTAACATACAGGGGCTACTTCTAA

Coding sequence (CDS)

ATGCAGGAAAGATTAAATGAGCATGTTATTGATTATGATCTTCTCGAAGATTTAGTGATTCATGTGGATAAAACTTTTGATGAGGGAGCCATACTTGTTTTCTTGCCAGGAGTGTCAGAAATTCACTTGTTGTATGATAGATTAGCTGCTTCTTACCAATTTGGTGGACAGGCTTCTGATTGGATTCTTCCTTTGCATTCGTCCATTGCATCTACTGATCAAAAAAAGGTGTTTTTACGGCCTCCTTATGGCATCCGCAAGGCAAGTTTTGTAACATACAGGGGCTACTTCTAA

Protein sequence

MQERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGIRKASFVTYRGYF*

Homology

[Close]

BLAST of MELO3C019422 vs. Swiss-Prot
Match: DEXH7_ARATH (DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana GN=At1g58060 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.1e-28
Identity = 59/90 (65.56%), Postives = 74/90 (82.22%), Query Frame = 1


Query: 3   ERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI 62
           +RLNE  IDY+LLE+L+ H+D T +EGAIL+FLPGV+EI++L D LAASY+F G A+DW+
Sbjct: 890 KRLNEDRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWL 949

Query: 63  LPLHSSIASTDQKKVFLRPPYGIRKASFVT 93
           LPLHSSIAS++Q+KVFLRPP G+RK    T
Sbjct: 950 LPLHSSIASSEQRKVFLRPPKGLRKVIAAT 979

[Close]

BLAST of MELO3C019422 vs. Swiss-Prot
Match: DEXH4_ARATH (DExH-box ATP-dependent RNA helicase DExH4, chloroplastic OS=Arabidopsis thaliana GN=At1g58050 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.8e-28
Identity = 59/84 (70.24%), Postives = 70/84 (83.33%), Query Frame = 1


Query: 9   VIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSS 68
           V+DYDLLE+L+ H+D T +EGAILVFLPG+SEI++L +RLAASY+F G + DW+LPLHSS
Sbjct: 863 VVDYDLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWLLPLHSS 922

Query: 69  IASTDQKKVFLRPPYGIRKASFVT 93
           IAST+QKKVFLRPP GIRK    T
Sbjct: 923 IASTEQKKVFLRPPKGIRKVIIAT 946

[Close]

BLAST of MELO3C019422 vs. Swiss-Prot
Match: DHX30_BOVIN (Putative ATP-dependent RNA helicase DHX30 OS=Bos taurus GN=DHX30 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 7.6e-11
Identity = 39/91 (42.86%), Postives = 51/91 (56.04%), Query Frame = 1


Query: 3   ERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDW- 62
           E  +E  +D DL+ DLV+H+D   + G IL FLPG  EI  +  RL  +   G   S + 
Sbjct: 669 ESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA--LGMHESKYL 728

Query: 63  ILPLHSSIASTDQKKVFLRPPYGIRKASFVT 93
           ILP+HS+I   DQK +F +PP G+RK    T
Sbjct: 729 ILPVHSNIPMMDQKAIFQQPPIGVRKIVLAT 757

[Close]

BLAST of MELO3C019422 vs. Swiss-Prot
Match: DHX30_RAT (Putative ATP-dependent RNA helicase DHX30 OS=Rattus norvegicus GN=Dhx30 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 7.6e-11
Identity = 39/91 (42.86%), Postives = 51/91 (56.04%), Query Frame = 1


Query: 3   ERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDW- 62
           E  +E  +D DL+ DLV+H+D   + G IL FLPG  EI  +  RL  +   G   S + 
Sbjct: 643 ESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA--LGMHESKYL 702

Query: 63  ILPLHSSIASTDQKKVFLRPPYGIRKASFVT 93
           ILP+HS+I   DQK +F +PP G+RK    T
Sbjct: 703 ILPVHSNIPMMDQKAIFQQPPLGVRKIVLAT 731

[Close]

BLAST of MELO3C019422 vs. Swiss-Prot
Match: DHX30_PONAB (Putative ATP-dependent RNA helicase DHX30 OS=Pongo abelii GN=DHX30 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 7.6e-11
Identity = 39/91 (42.86%), Postives = 51/91 (56.04%), Query Frame = 1


Query: 3   ERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDW- 62
           E  +E  +D DL+ DLV+H+D   + G IL FLPG  EI  +  RL  +   G   S + 
Sbjct: 643 ESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA--LGMHESKYL 702

Query: 63  ILPLHSSIASTDQKKVFLRPPYGIRKASFVT 93
           ILP+HS+I   DQK +F +PP G+RK    T
Sbjct: 703 ILPVHSNIPMMDQKAIFQQPPVGVRKIVLAT 731

[Close]

BLAST of MELO3C019422 vs. TrEMBL
Match: A0A0A0L9F8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G228370 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 3.8e-41
Identity = 85/90 (94.44%), Postives = 86/90 (95.56%), Query Frame = 1


Query: 3   ERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI 62
           ERLNEH+IDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI
Sbjct: 62  ERLNEHIIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI 121

Query: 63  LPLHSSIASTDQKKVFLRPPYGIRKASFVT 93
           LPLHSSIASTDQKKVFLRPPYGIRK    T
Sbjct: 122 LPLHSSIASTDQKKVFLRPPYGIRKVIIAT 151

[Close]

BLAST of MELO3C019422 vs. TrEMBL
Match: M5XY08_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000230mg PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.1e-31
Identity = 70/90 (77.78%), Postives = 78/90 (86.67%), Query Frame = 1


Query: 3   ERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI 62
           +RLNE VIDYDLLEDLV HVD+T DEGAILVFLPG+SEI+ L D+LAASY+FGGQASDWI
Sbjct: 857 KRLNEDVIDYDLLEDLVCHVDETCDEGAILVFLPGISEIYTLVDKLAASYRFGGQASDWI 916

Query: 63  LPLHSSIASTDQKKVFLRPPYGIRKASFVT 93
           LPLHSS++STDQKKVFLR P  IRK    T
Sbjct: 917 LPLHSSVSSTDQKKVFLRAPENIRKVIVAT 946

[Close]

BLAST of MELO3C019422 vs. TrEMBL
Match: B9SSN0_RICCO (ATP-dependent RNA helicase, putative OS=Ricinus communis GN=RCOM_1374260 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 6.0e-31
Identity = 66/90 (73.33%), Postives = 78/90 (86.67%), Query Frame = 1


Query: 3   ERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI 62
           +RL+E +IDYDLLEDL+ HVD+T+ EGAILVFLPG+SEIH+L DRL ASY+FGG +S+W+
Sbjct: 888 KRLDEDIIDYDLLEDLIFHVDQTYGEGAILVFLPGMSEIHMLLDRLVASYRFGGPSSNWV 947

Query: 63  LPLHSSIASTDQKKVFLRPPYGIRKASFVT 93
           LPLHSSIASTDQKKVFLRPP  IRK    T
Sbjct: 948 LPLHSSIASTDQKKVFLRPPENIRKVIIAT 977

[Close]

BLAST of MELO3C019422 vs. TrEMBL
Match: V4SBK4_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v100000301mg PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 3.9e-30
Identity = 68/90 (75.56%), Postives = 76/90 (84.44%), Query Frame = 1


Query: 3   ERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI 62
           +RLNE VIDYDLLEDLV HVD+T  EGAILVFLPGV+EIH+L DRLAASY+FGG +SDW+
Sbjct: 886 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL 945

Query: 63  LPLHSSIASTDQKKVFLRPPYGIRKASFVT 93
           L LHSS+AS DQKKVFLRPP  IRK    T
Sbjct: 946 LALHSSVASVDQKKVFLRPPEKIRKVIIAT 975

[Close]

BLAST of MELO3C019422 vs. TrEMBL
Match: V4SVZ1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v100000301mg PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 3.9e-30
Identity = 68/90 (75.56%), Postives = 76/90 (84.44%), Query Frame = 1


Query: 3   ERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI 62
           +RLNE VIDYDLLEDLV HVD+T  EGAILVFLPGV+EIH+L DRLAASY+FGG +SDW+
Sbjct: 886 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL 945

Query: 63  LPLHSSIASTDQKKVFLRPPYGIRKASFVT 93
           L LHSS+AS DQKKVFLRPP  IRK    T
Sbjct: 946 LALHSSVASVDQKKVFLRPPEKIRKVIIAT 975

[Close]

BLAST of MELO3C019422 vs. TAIR10
Match: AT1G58060.1 (AT1G58060.1 RNA helicase family protein)

HSP 1 Score: 127.1 bits (318), Expect = 6.0e-30
Identity = 59/90 (65.56%), Postives = 74/90 (82.22%), Query Frame = 1


Query: 3   ERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI 62
           +RLNE  IDY+LLE+L+ H+D T +EGAIL+FLPGV+EI++L D LAASY+F G A+DW+
Sbjct: 890 KRLNEDRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWL 949

Query: 63  LPLHSSIASTDQKKVFLRPPYGIRKASFVT 93
           LPLHSSIAS++Q+KVFLRPP G+RK    T
Sbjct: 950 LPLHSSIASSEQRKVFLRPPKGLRKVIAAT 979

[Close]

BLAST of MELO3C019422 vs. TAIR10
Match: AT1G58050.1 (AT1G58050.1 RNA helicase family protein)

HSP 1 Score: 126.3 bits (316), Expect = 1.0e-29
Identity = 59/84 (70.24%), Postives = 70/84 (83.33%), Query Frame = 1


Query: 9   VIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSS 68
           V+DYDLLE+L+ H+D T +EGAILVFLPG+SEI++L +RLAASY+F G + DW+LPLHSS
Sbjct: 863 VVDYDLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWLLPLHSS 922

Query: 69  IASTDQKKVFLRPPYGIRKASFVT 93
           IAST+QKKVFLRPP GIRK    T
Sbjct: 923 IASTEQKKVFLRPPKGIRKVIIAT 946

[Close]

BLAST of MELO3C019422 vs. TAIR10
Match: AT2G30800.1 (AT2G30800.1 helicase in vascular tissue and tapetum)

HSP 1 Score: 60.5 bits (145), Expect = 6.9e-10
Identity = 34/88 (38.64%), Postives = 47/88 (53.41%), Query Frame = 1


Query: 5   LNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILP 64
           +N   +D  L++ L+  +    ++GAILVFLPG  +I+    RL  +  F   A   I+ 
Sbjct: 528 INPEQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFDIIC 587

Query: 65  LHSSIASTDQKKVFLRPPYGIRKASFVT 93
           LHS + + +QKKVF RPP G RK    T
Sbjct: 588 LHSMVPAGEQKKVFNRPPPGCRKIVLAT 615

[Close]

BLAST of MELO3C019422 vs. TAIR10
Match: AT1G48650.2 (AT1G48650.2 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-09
Identity = 31/83 (37.35%), Postives = 48/83 (57.83%), Query Frame = 1


Query: 10  IDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSI 69
           I ++L+E+++ H+ K    GA+LVF+ G  +I+ L ++L A    G      +L  H S+
Sbjct: 560 IGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSM 619

Query: 70  ASTDQKKVFLRPPYGIRKASFVT 93
           AS++Q+ +F RPP GIRK    T
Sbjct: 620 ASSEQRLIFDRPPEGIRKIVLAT 642

[Close]

BLAST of MELO3C019422 vs. TAIR10
Match: AT2G35920.1 (AT2G35920.1 RNA helicase family protein)

HSP 1 Score: 57.8 bits (138), Expect = 4.4e-09
Identity = 31/83 (37.35%), Postives = 45/83 (54.22%), Query Frame = 1


Query: 10  IDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSI 69
           ID DL+E  + H+ +    GAILVFL G  EI  L +++  +   G  +   +LPLH S+
Sbjct: 485 IDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKINMNNFLGDSSKFLVLPLHGSM 544

Query: 70  ASTDQKKVFLRPPYGIRKASFVT 93
            + +Q+++F RPP   RK    T
Sbjct: 545 PTVNQREIFDRPPPNKRKIVLAT 567

[Close]

BLAST of MELO3C019422 vs. NCBI nr
Match: gi|659112042|ref|XP_008456037.1| (PREDICTED: ATP-dependent RNA helicase DHX36 isoform X2 [Cucumis melo])

HSP 1 Score: 175.6 bits (444), Expect = 4.1e-41
Identity = 86/90 (95.56%), Postives = 86/90 (95.56%), Query Frame = 1


Query: 3   ERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI 62
           ERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI
Sbjct: 760 ERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI 819

Query: 63  LPLHSSIASTDQKKVFLRPPYGIRKASFVT 93
           LPLHSSIASTDQKKVFLRPPYGIRK    T
Sbjct: 820 LPLHSSIASTDQKKVFLRPPYGIRKVIIAT 849

[Close]

BLAST of MELO3C019422 vs. NCBI nr
Match: gi|659112040|ref|XP_008456036.1| (PREDICTED: ATP-dependent RNA helicase DHX29 isoform X1 [Cucumis melo])

HSP 1 Score: 175.6 bits (444), Expect = 4.1e-41
Identity = 86/90 (95.56%), Postives = 86/90 (95.56%), Query Frame = 1


Query: 3    ERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI 62
            ERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI
Sbjct: 914  ERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI 973

Query: 63   LPLHSSIASTDQKKVFLRPPYGIRKASFVT 93
            LPLHSSIASTDQKKVFLRPPYGIRK    T
Sbjct: 974  LPLHSSIASTDQKKVFLRPPYGIRKVIIAT 1003

[Close]

BLAST of MELO3C019422 vs. NCBI nr
Match: gi|778680315|ref|XP_011651288.1| (PREDICTED: ATP-dependent RNA helicase DHX36 isoform X2 [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 5.4e-41
Identity = 85/90 (94.44%), Postives = 86/90 (95.56%), Query Frame = 1


Query: 3   ERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI 62
           ERLNEH+IDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI
Sbjct: 760 ERLNEHIIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI 819

Query: 63  LPLHSSIASTDQKKVFLRPPYGIRKASFVT 93
           LPLHSSIASTDQKKVFLRPPYGIRK    T
Sbjct: 820 LPLHSSIASTDQKKVFLRPPYGIRKVIIAT 849

[Close]

BLAST of MELO3C019422 vs. NCBI nr
Match: gi|700202476|gb|KGN57609.1| (hypothetical protein Csa_3G228370 [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 5.4e-41
Identity = 85/90 (94.44%), Postives = 86/90 (95.56%), Query Frame = 1


Query: 3   ERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI 62
           ERLNEH+IDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI
Sbjct: 62  ERLNEHIIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI 121

Query: 63  LPLHSSIASTDQKKVFLRPPYGIRKASFVT 93
           LPLHSSIASTDQKKVFLRPPYGIRK    T
Sbjct: 122 LPLHSSIASTDQKKVFLRPPYGIRKVIIAT 151

[Close]

BLAST of MELO3C019422 vs. NCBI nr
Match: gi|778680313|ref|XP_011651287.1| (PREDICTED: ATP-dependent RNA helicase DHX29 isoform X1 [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 5.4e-41
Identity = 85/90 (94.44%), Postives = 86/90 (95.56%), Query Frame = 1


Query: 3    ERLNEHVIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI 62
            ERLNEH+IDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI
Sbjct: 914  ERLNEHIIDYDLLEDLVIHVDKTFDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWI 973

Query: 63   LPLHSSIASTDQKKVFLRPPYGIRKASFVT 93
            LPLHSSIASTDQKKVFLRPPYGIRK    T
Sbjct: 974  LPLHSSIASTDQKKVFLRPPYGIRKVIIAT 1003

The following BLAST results are available for this feature:

BLAST of MELO3C019422 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DEXH7_ARATH	1.1e-28	65.56	DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana...	[more]
DEXH4_ARATH	1.8e-28	70.24	DExH-box ATP-dependent RNA helicase DExH4, chloroplastic OS=Arabidopsis thaliana...	[more]
DHX30_BOVIN	7.6e-11	42.86	Putative ATP-dependent RNA helicase DHX30 OS=Bos taurus GN=DHX30 PE=2 SV=1	[more]
DHX30_RAT	7.6e-11	42.86	Putative ATP-dependent RNA helicase DHX30 OS=Rattus norvegicus GN=Dhx30 PE=1 SV=...	[more]
DHX30_PONAB	7.6e-11	42.86	Putative ATP-dependent RNA helicase DHX30 OS=Pongo abelii GN=DHX30 PE=2 SV=1	[more]

BLAST of MELO3C019422 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9F8_CUCSA	3.8e-41	94.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G228370 PE=4 SV=1	[more]
M5XY08_PRUPE	2.1e-31	77.78	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000230mg PE=4 SV=1	[more]
B9SSN0_RICCO	6.0e-31	73.33	ATP-dependent RNA helicase, putative OS=Ricinus communis GN=RCOM_1374260 PE=4 SV...	[more]
V4SBK4_9ROSI	3.9e-30	75.56	Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v100000301mg PE...	[more]
V4SVZ1_9ROSI	3.9e-30	75.56	Uncharacterized protein OS=Citrus clementina GN=CICLE_v100000301mg PE=4 SV=1	[more]

BLAST of MELO3C019422 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G58060.1	6.0e-30	65.56	RNA helicase family protein	[more]
AT1G58050.1	1.0e-29	70.24	RNA helicase family protein	[more]
AT2G30800.1	6.9e-10	38.64	helicase in vascular tissue and tapetum	[more]
AT1G48650.2	2.0e-09	37.35	DEA(D/H)-box RNA helicase family protein	[more]
AT2G35920.1	4.4e-09	37.35	RNA helicase family protein	[more]

BLAST of MELO3C019422 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659112042\|ref\|XP_008456037.1\|	4.1e-41	95.56	PREDICTED: ATP-dependent RNA helicase DHX36 isoform X2 [Cucumis melo]	[more]
gi\|659112040\|ref\|XP_008456036.1\|	4.1e-41	95.56	PREDICTED: ATP-dependent RNA helicase DHX29 isoform X1 [Cucumis melo]	[more]
gi\|778680315\|ref\|XP_011651288.1\|	5.4e-41	94.44	PREDICTED: ATP-dependent RNA helicase DHX36 isoform X2 [Cucumis sativus]	[more]
gi\|700202476\|gb\|KGN57609.1\|	5.4e-41	94.44	hypothetical protein Csa_3G228370 [Cucumis sativus]	[more]
gi\|778680313\|ref\|XP_011651287.1\|	5.4e-41	94.44	PREDICTED: ATP-dependent RNA helicase DHX29 isoform X1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008026	ATP-dependent helicase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU56859	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019422T1	MELO3C019422T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU56859	MU56859	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR18934	ATP-DEPENDENT RNA HELICASE	coord: 4..87 score: 1.3
None	No IPR available	PANTHER	PTHR18934:SF145	ATP-DEPENDENT RNA HELICASE DHX57-RELATED	coord: 4..87 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C019422	Csa3G228370	Cucumber (Chinese Long) v2	cumeB166
MELO3C019422	CSPI03G19210	Wild cucumber (PI 183967)	cpimeB241
MELO3C019422	Cucsa.032800	Cucumber (Gy14) v1	cgymeB002

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C019422	Cucumber (Chinese Long) v3	cucmeB247
MELO3C019422	Watermelon (97103) v2	mewmbB434
MELO3C019422	Wax gourd	mewgoB530
MELO3C019422	Cucurbita maxima (Rimu)	cmameB298
MELO3C019422	Cucurbita maxima (Rimu)	cmameB691
MELO3C019422	Cucurbita moschata (Rifu)	cmomeB290
MELO3C019422	Cucurbita moschata (Rifu)	cmomeB683
MELO3C019422	Watermelon (Charleston Gray)	mewcgB427
MELO3C019422	Watermelon (97103) v1	mewmB461
MELO3C019422	Cucurbita pepo (Zucchini)	cpemeB192
MELO3C019422	Cucurbita pepo (Zucchini)	cpemeB412
MELO3C019422	Bottle gourd (USVL1VR-Ls)	lsimeB368
MELO3C019422	Cucumber (Gy14) v2	cgybmeB210
MELO3C019422	Silver-seed gourd	carmeB0041
MELO3C019422	Silver-seed gourd	carmeB0651