MU56859 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU56859
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	ATP-dependent RNA helicase, putative
Location	chr6 : 9469445 .. 9488836 (+)
Sequence length	800

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

TGGTAACTGCCCTGTAATCACTGCAGAGGGTAGGGTGCATCCTGTAACCACCTACTTTCTTGAAGATATATATGAGAGTACTGGGTACCACCTCGCTTCAGACTCCCCTGCTGCCATACGATATGAAGTATCAAGTGGCAAAAAGAGTGCTCCAGTCAATTATCGAAGAGGAAAGAAAAACCTCATATTATCCGGATGGGGTGACGATGTTTTACTTTCTGAAGCCTGTACGAATCCTTACTACAATTCAGATTGTTATCAATCATATAGTGAGTTGACACATAAAAATCTGGAAAGATTAAATGAGCATGTTATTGATTATGATCTTCTCGAAGATTTAGTGATTCATGTGGATAAAACTTTTGATGAGGGAGCCATACTTGTTTTCTTGCCAGGAGTGTCAGAAATTCACTTGTTGTATGATAGATTAGCTGCTTCTTACCAATTTGGTGGACAGGCTTCTGATTGGATTCTTCCTTTGCATTCGTCCATTGCATCTACTGATCAAAAAAAGGTGTTTTTACGGCCTCCTTATGGCATCCGGAAGGTTATAATAGCCACAAATATTGCGGAGACCAGTATTACGATCGATGATGTGGTTTATGTGATAGACAGTGGAAGACATAAAGAGAACCGTTACAATCCTCAAAAGAAATTATCAAGCATGGTTGAGGATTGGATTTCTCAAGCGAATGCTAGGCAGCGGCGAGGAAGAGCTGGACGTGTGAGACCTGGTACTTGCTTTTGTTTATACACACATCACAGATATGAAAAGCTCATGCGCCCTTTTCAGGTCCCTG

Library


Library category	ESTs
melon A library	1

Homology

[Close]

BLAST of MU56859 vs. Swiss-Prot
Match: DEXH7_ARATH (DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana GN=At1g58060 PE=2 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.1e-101
Identity = 181/266 (68.05%), Postives = 211/266 (79.32%), Query Frame = 2


Query: 2    GNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKN 61
            G+CPVITA+GR HPVTT+FLE+IYES  Y LA DSPAA+R + S   K   VN RRGKKN
Sbjct: 793  GHCPVITAQGRTHPVTTHFLEEIYESINYLLAPDSPAALRSDTSIKDKLGSVNDRRGKKN 852

Query: 62   LILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKT 121
            L+L+GWGDD LLSE C NP+Y S  Y SYS+ T +NL+RLNE  IDY+LLE+L+ H+D T
Sbjct: 853  LVLAGWGDDYLLSEDCLNPFYVSSNYNSYSDQTQQNLKRLNEDRIDYELLEELICHIDDT 912

Query: 122  FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI 181
             +EGAIL+FLPGV+EI++L D LAASY+F G A+DW+LPLHSSIAS++Q+KVFLRPP G+
Sbjct: 913  CEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWLLPLHSSIASSEQRKVFLRPPKGL 972

Query: 182  RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQXXXXXXXXXXX 241
            RKVI ATNIAETSITIDDVVYVIDSG+HKENRYNPQKKLSSMVEDWISQ           
Sbjct: 973  RKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAG 1032

Query: 242  XXXXXTCFCLYTHHRYEKLMRPFQVP 301
                  CF LYT +R+EKLMRP+QVP
Sbjct: 1033 RVKPGICFSLYTRYRFEKLMRPYQVP 1058

Query: 302   361
            
Sbjct: 1093  1058

Query: 362   421
            
Sbjct: 1153  1058

Query: 422   481
            
Sbjct: 1213  1058

Query: 482   541
            
Sbjct: 1273  1058

Query: 542   601
            
Sbjct: 1333  1058

Query: 602   661
            
Sbjct: 1393  1058

Query: 662   721
            
Sbjct: 1453  1058

Query: 722   781
            
Sbjct: 1513  1058

Query: 782   800
            
Sbjct: 1573  1058

[Close]

BLAST of MU56859 vs. Swiss-Prot
Match: DEXH4_ARATH (DExH-box ATP-dependent RNA helicase DExH4, chloroplastic OS=Arabidopsis thaliana GN=At1g58050 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 2.6e-90
Identity = 169/266 (63.53%), Postives = 195/266 (73.31%), Query Frame = 2


Query: 2    GNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKN 61
            G CP+ITA+GR HPVTTYFLEDIYE T Y LASDSPAA+  + S   K   VN  RGKKN
Sbjct: 773  GQCPIITAQGRTHPVTTYFLEDIYERTKYLLASDSPAALSSDTSITDKLGSVNVPRGKKN 832

Query: 62   LILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKT 121
            L+L+GWGD  L+SE   N  Y+S  Y             +   V+DYDLLE+L+ H+D T
Sbjct: 833  LMLAGWGDSYLVSEDSLNTSYDSIKY-------------IASAVVDYDLLEELICHIDDT 892

Query: 122  FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI 181
             +EGAILVFLPG+SEI++L +RLAASY+F G + DW+LPLHSSIAST+QKKVFLRPP GI
Sbjct: 893  CEEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWLLPLHSSIASTEQKKVFLRPPKGI 952

Query: 182  RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQXXXXXXXXXXX 241
            RKVIIATNIAETSITI+DVVYVIDSG+HKENRYNP KKLSSMVEDW+S+           
Sbjct: 953  RKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQRMGRAG 1012

Query: 242  XXXXXTCFCLYTHHRYEKLMRPFQVP 301
                  CF LYT HR+EKLMRP+QVP
Sbjct: 1013 RVKPGHCFSLYTRHRFEKLMRPYQVP 1025

Query: 302   361
            
Sbjct: 1073  1025

Query: 362   421
            
Sbjct: 1133  1025

Query: 422   481
            
Sbjct: 1193  1025

Query: 482   541
            
Sbjct: 1253  1025

Query: 542   601
            
Sbjct: 1313  1025

Query: 602   661
            
Sbjct: 1373  1025

Query: 662   721
            
Sbjct: 1433  1025

Query: 722   781
            
Sbjct: 1493  1025

Query: 782   800
            
Sbjct: 1553  1025

[Close]

BLAST of MU56859 vs. Swiss-Prot
Match: DHX29_MOUSE (ATP-dependent RNA helicase Dhx29 OS=Mus musculus GN=Dhx29 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 6.2e-39
Identity = 94/269 (34.94%), Postives = 149/269 (55.39%), Query Frame = 2


Query: 5    NCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKNL 64
            +CP++   GR +PV  + LEDI E TG+ L  DS    ++     + +  V  + G    
Sbjct: 747  HCPILRISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEEITINVTSKAGGVKK 806

Query: 65   ILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKTF 124
                   + +  ++  +P  N   YQ YS  T   +  +N H I+ DL+ +L++++DK+ 
Sbjct: 807  Y-----QEYIPVQSGASPELNP-FYQKYSSRTQHAILYMNPHKINLDLILELLVYLDKSP 866

Query: 125  D----EGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPP 184
                 EGA+L+FLPG++ I  LYD L++  +F  +    ++ LHS +++ DQ   F+ PP
Sbjct: 867  QFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFYSERYQ-VIALHSVLSTQDQAAAFMFPP 926

Query: 185  YGIRKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQXXXXXXXX 244
             G+RK+++ATNIAET ITI DVV+VID+GR KEN+Y+   ++SS+VE ++S+        
Sbjct: 927  PGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQG 986

Query: 245  XXXXXXXXTCFCLYTHHRYEKLMRPFQVP 304
                     CF LYT  R+E  +  + VP
Sbjct: 987  RAGRVRDGFCFRLYTRERFEGFL-DYSVP 1007

Query: 305   364
            
Sbjct: 1047  1007

Query: 365   424
            
Sbjct: 1107  1007

Query: 425   484
            
Sbjct: 1167  1007

Query: 485   544
            
Sbjct: 1227  1007

Query: 545   604
            
Sbjct: 1287  1007

Query: 605   664
            
Sbjct: 1347  1007

Query: 665   724
            
Sbjct: 1407  1007

Query: 725   784
            
Sbjct: 1467  1007

Query: 785   800
            
Sbjct: 1527  1007

[Close]

BLAST of MU56859 vs. Swiss-Prot
Match: DHX29_XENLA (ATP-dependent RNA helicase DHX29 OS=Xenopus laevis GN=dhx29 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.4e-38
Identity = 98/275 (35.64%), Postives = 147/275 (53.45%), Query Frame = 2


Query: 5    NCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKNL 64
            +CP+I   GR  PV  + LED+ E+TG+ L  DS    ++     + +  V  + G    
Sbjct: 742  HCPIIRISGRTFPVEVFHLEDVVEATGFVLEQDSEYCQKFLEDEEEITLSVTGKGGSSKK 801

Query: 65   IL------SGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVI 124
                    SG G D+               YQ YS  T   +  +N + I+ DL+ +L++
Sbjct: 802  YQEFIPAQSGTGLDL------------GARYQRYSSQTRHAVLYMNPNKINLDLILELLV 861

Query: 125  HVDKTFD----EGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKK 184
             +D + +    EGA+L+FLPG+++I  LYD L++  +F  +    ++ LHS ++S DQ +
Sbjct: 862  FLDISPEYRNVEGAVLIFLPGLADIQQLYDILSSDKRFHDRRRYKLIALHSILSSQDQAE 921

Query: 185  VFLRPPYGIRKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQXX 244
             F+ PP G RK+++ATNIAET ITI DVV+VID+GR KENRY+   ++SS+VE +IS+  
Sbjct: 922  AFILPPAGTRKIVLATNIAETGITIPDVVFVIDAGRTKENRYHESSQMSSLVETFISKAS 981

Query: 245  XXXXXXXXXXXXXXTCFCLYTHHRYEKLMRPFQVP 304
                           CF LYT  R+E  M  + VP
Sbjct: 982  ALQRQGRAGRVRNGYCFRLYTRERFESFME-YSVP 1003

Query: 305   364
            
Sbjct: 1042  1003

Query: 365   424
            
Sbjct: 1102  1003

Query: 425   484
            
Sbjct: 1162  1003

Query: 485   544
            
Sbjct: 1222  1003

Query: 545   604
            
Sbjct: 1282  1003

Query: 605   664
            
Sbjct: 1342  1003

Query: 665   724
            
Sbjct: 1402  1003

Query: 725   784
            
Sbjct: 1462  1003

Query: 785   800
            
Sbjct: 1522  1003

[Close]

BLAST of MU56859 vs. Swiss-Prot
Match: DHX29_HUMAN (ATP-dependent RNA helicase DHX29 OS=Homo sapiens GN=DHX29 PE=1 SV=2)

HSP 1 Score: 159.1 bits (401), Expect = 6.8e-38
Identity = 95/272 (34.93%), Postives = 149/272 (54.78%), Query Frame = 2


Query: 5    NCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKNL 64
            +CP++   GR +PV  + LEDI E TG+ L  DS    ++     + +  V  + G    
Sbjct: 748  HCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEVTINVTSKAGG--- 807

Query: 65   ILSGWGDDVLL---SEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVD 124
             +  + + + +   + A  NP+Y     Q YS  T   +  +N H I+ DL+ +L+ ++D
Sbjct: 808  -IKKYQEYIPVQTGAHADLNPFY-----QKYSSRTQHAILYMNPHKINLDLILELLAYLD 867

Query: 125  KTFD----EGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFL 184
            K+      EGA+L+FLPG++ I  LYD L+   +F  +    ++ LHS +++ DQ   F 
Sbjct: 868  KSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYK-VIALHSILSTQDQAAAFT 927

Query: 185  RPPYGIRKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQXXXXX 244
             PP G+RK+++ATNIAET ITI DVV+VID+GR KEN+Y+   ++SS+VE ++S+     
Sbjct: 928  LPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQ 987

Query: 245  XXXXXXXXXXXTCFCLYTHHRYEKLMRPFQVP 304
                        CF +YT  R+E  M  + VP
Sbjct: 988  RQGRAGRVRDGFCFRMYTRERFEGFM-DYSVP 1008

Query: 305   364
            
Sbjct: 1048  1008

Query: 365   424
            
Sbjct: 1108  1008

Query: 425   484
            
Sbjct: 1168  1008

Query: 485   544
            
Sbjct: 1228  1008

Query: 545   604
            
Sbjct: 1288  1008

Query: 605   664
            
Sbjct: 1348  1008

Query: 665   724
            
Sbjct: 1408  1008

Query: 725   784
            
Sbjct: 1468  1008

Query: 785   800
            
Sbjct: 1528  1008

[Close]

BLAST of MU56859 vs. TrEMBL
Match: B9SSN0_RICCO (ATP-dependent RNA helicase, putative OS=Ricinus communis GN=RCOM_1374260 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 1.7e-107
Identity = 193/266 (72.56%), Postives = 220/266 (82.71%), Query Frame = 2


Query: 2    GNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKN 61
            G+CPV++A+GR HPVTTYFLEDIYES  YHLASDSPAA+  + S+  KS PVN RRGKKN
Sbjct: 791  GHCPVLSAQGRTHPVTTYFLEDIYESIDYHLASDSPAALGLQTSTIAKSGPVNDRRGKKN 850

Query: 62   LILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKT 121
            L+LSGWGDD LLSE   NP++ S  YQSYSE T KNL+RL+E +IDYDLLEDL+ HVD+T
Sbjct: 851  LVLSGWGDDSLLSEEIINPHFVSSNYQSYSEQTQKNLKRLDEDIIDYDLLEDLIFHVDQT 910

Query: 122  FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI 181
            + EGAILVFLPG+SEIH+L DRL ASY+FGG +S+W+LPLHSSIASTDQKKVFLRPP  I
Sbjct: 911  YGEGAILVFLPGMSEIHMLLDRLVASYRFGGPSSNWVLPLHSSIASTDQKKVFLRPPENI 970

Query: 182  RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQXXXXXXXXXXX 241
            RKVIIATNIAETSITIDDVVYVID G+HKENRYNPQKKL+SMVEDWISQ           
Sbjct: 971  RKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLTSMVEDWISQANARQRRGRAG 1030

Query: 242  XXXXXTCFCLYTHHRYEKLMRPFQVP 301
                  CFCLYT HR++KLMRP+QVP
Sbjct: 1031 RVKPGICFCLYTCHRFKKLMRPYQVP 1056

Query: 302   361
            
Sbjct: 1091  1056

Query: 362   421
            
Sbjct: 1151  1056

Query: 422   481
            
Sbjct: 1211  1056

Query: 482   541
            
Sbjct: 1271  1056

Query: 542   601
            
Sbjct: 1331  1056

Query: 602   661
            
Sbjct: 1391  1056

Query: 662   721
            
Sbjct: 1451  1056

Query: 722   781
            
Sbjct: 1511  1056

Query: 782   800
            
Sbjct: 1571  1056

[Close]

BLAST of MU56859 vs. TrEMBL
Match: A0A061DYH6_THECC (ATP-dependent RNA helicase, putative isoform 1 OS=Theobroma cacao GN=TCM_006225 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 2.4e-106
Identity = 195/266 (73.31%), Postives = 215/266 (80.83%), Query Frame = 2


Query: 2    GNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKN 61
            G CPVITA+GR H VTT FLEDIYES  YHLASDSPA++RYE S+   S PVN RRGKKN
Sbjct: 792  GFCPVITAQGRTHAVTTCFLEDIYESINYHLASDSPASLRYETSTKDMSGPVNNRRGKKN 851

Query: 62   LILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKT 121
            L+LS WGDD LLSE   NP+Y+S  YQSYSE T KNL+RLNE VIDYDLLE LV HVD+T
Sbjct: 852  LVLSAWGDDSLLSEDYVNPHYDSSSYQSYSEQTQKNLKRLNEDVIDYDLLEYLVCHVDET 911

Query: 122  FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI 181
              EGAIL+FLPGV EI+ L DRLAASYQFGG +SDW+LPLHSSIAS++QKKVFL PP GI
Sbjct: 912  CGEGAILIFLPGVVEIYTLLDRLAASYQFGGPSSDWLLPLHSSIASSEQKKVFLNPPNGI 971

Query: 182  RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQXXXXXXXXXXX 241
            RKVIIATN+AETSITIDDVVYVID G+HKENRYNPQKKLSSMVEDWIS+           
Sbjct: 972  RKVIIATNVAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISRANAKQRRGRAG 1031

Query: 242  XXXXXTCFCLYTHHRYEKLMRPFQVP 301
                  CFCLYT HR+EKLMRP+QVP
Sbjct: 1032 RVKPGICFCLYTQHRFEKLMRPYQVP 1057

Query: 302   361
            
Sbjct: 1092  1057

Query: 362   421
            
Sbjct: 1152  1057

Query: 422   481
            
Sbjct: 1212  1057

Query: 482   541
            
Sbjct: 1272  1057

Query: 542   601
            
Sbjct: 1332  1057

Query: 602   661
            
Sbjct: 1392  1057

Query: 662   721
            
Sbjct: 1452  1057

Query: 722   781
            
Sbjct: 1512  1057

Query: 782   800
            
Sbjct: 1572  1057

[Close]

BLAST of MU56859 vs. TrEMBL
Match: A0A061E4D8_THECC (ATP-dependent RNA helicase, putative isoform 4 OS=Theobroma cacao GN=TCM_006225 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 2.4e-106
Identity = 195/266 (73.31%), Postives = 215/266 (80.83%), Query Frame = 2


Query: 2   GNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKN 61
           G CPVITA+GR H VTT FLEDIYES  YHLASDSPA++RYE S+   S PVN RRGKKN
Sbjct: 326 GFCPVITAQGRTHAVTTCFLEDIYESINYHLASDSPASLRYETSTKDMSGPVNNRRGKKN 385

Query: 62  LILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKT 121
           L+LS WGDD LLSE   NP+Y+S  YQSYSE T KNL+RLNE VIDYDLLE LV HVD+T
Sbjct: 386 LVLSAWGDDSLLSEDYVNPHYDSSSYQSYSEQTQKNLKRLNEDVIDYDLLEYLVCHVDET 445

Query: 122 FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI 181
             EGAIL+FLPGV EI+ L DRLAASYQFGG +SDW+LPLHSSIAS++QKKVFL PP GI
Sbjct: 446 CGEGAILIFLPGVVEIYTLLDRLAASYQFGGPSSDWLLPLHSSIASSEQKKVFLNPPNGI 505

Query: 182 RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQXXXXXXXXXXX 241
           RKVIIATN+AETSITIDDVVYVID G+HKENRYNPQKKLSSMVEDWIS+           
Sbjct: 506 RKVIIATNVAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISRANAKQRRGRAG 565

Query: 242 XXXXXTCFCLYTHHRYEKLMRPFQVP 301
                 CFCLYT HR+EKLMRP+QVP
Sbjct: 566 RVKPGICFCLYTQHRFEKLMRPYQVP 591

Query: 302  361
           
Sbjct: 626  591

Query: 362  421
           
Sbjct: 686  591

Query: 422  481
           
Sbjct: 746  591

Query: 482  541
           
Sbjct: 806  591

Query: 542  601
           
Sbjct: 866  591

Query: 602  661
           
Sbjct: 926  591

Query: 662  721
           
Sbjct: 986  591

Query: 722  781
           
Sbjct: 1046  591

Query: 782  800
           
Sbjct: 1106  591

[Close]

BLAST of MU56859 vs. TrEMBL
Match: A0A061DXK0_THECC (ATP-dependent RNA helicase, putative isoform 3 OS=Theobroma cacao GN=TCM_006225 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 2.4e-106
Identity = 195/266 (73.31%), Postives = 215/266 (80.83%), Query Frame = 2


Query: 2    GNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKN 61
            G CPVITA+GR H VTT FLEDIYES  YHLASDSPA++RYE S+   S PVN RRGKKN
Sbjct: 792  GFCPVITAQGRTHAVTTCFLEDIYESINYHLASDSPASLRYETSTKDMSGPVNNRRGKKN 851

Query: 62   LILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKT 121
            L+LS WGDD LLSE   NP+Y+S  YQSYSE T KNL+RLNE VIDYDLLE LV HVD+T
Sbjct: 852  LVLSAWGDDSLLSEDYVNPHYDSSSYQSYSEQTQKNLKRLNEDVIDYDLLEYLVCHVDET 911

Query: 122  FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI 181
              EGAIL+FLPGV EI+ L DRLAASYQFGG +SDW+LPLHSSIAS++QKKVFL PP GI
Sbjct: 912  CGEGAILIFLPGVVEIYTLLDRLAASYQFGGPSSDWLLPLHSSIASSEQKKVFLNPPNGI 971

Query: 182  RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQXXXXXXXXXXX 241
            RKVIIATN+AETSITIDDVVYVID G+HKENRYNPQKKLSSMVEDWIS+           
Sbjct: 972  RKVIIATNVAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISRANAKQRRGRAG 1031

Query: 242  XXXXXTCFCLYTHHRYEKLMRPFQVP 301
                  CFCLYT HR+EKLMRP+QVP
Sbjct: 1032 RVKPGICFCLYTQHRFEKLMRPYQVP 1057

Query: 302   361
            
Sbjct: 1092  1057

Query: 362   421
            
Sbjct: 1152  1057

Query: 422   481
            
Sbjct: 1212  1057

Query: 482   541
            
Sbjct: 1272  1057

Query: 542   601
            
Sbjct: 1332  1057

Query: 602   661
            
Sbjct: 1392  1057

Query: 662   721
            
Sbjct: 1452  1057

Query: 722   781
            
Sbjct: 1512  1057

Query: 782   800
            
Sbjct: 1572  1057

[Close]

BLAST of MU56859 vs. TrEMBL
Match: M5XY08_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000230mg PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 3.1e-106
Identity = 194/266 (72.93%), Postives = 216/266 (81.20%), Query Frame = 2


Query: 2    GNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKN 61
            GNCPVITAEGR HPVTTY+LEDIYES  Y +ASDSPA++ Y   + +K+  VN RRGKKN
Sbjct: 760  GNCPVITAEGRTHPVTTYYLEDIYESIDYRIASDSPASLGYGPLTKEKAGAVNNRRGKKN 819

Query: 62   LILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKT 121
            L+LS WGDD LLSE   NPYY  D YQSY E T +NL+RLNE VIDYDLLEDLV HVD+T
Sbjct: 820  LVLSAWGDDSLLSEENINPYYVPDRYQSYKEQTRQNLKRLNEDVIDYDLLEDLVCHVDET 879

Query: 122  FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI 181
             DEGAILVFLPG+SEI+ L D+LAASY+FGGQASDWILPLHSS++STDQKKVFLR P  I
Sbjct: 880  CDEGAILVFLPGISEIYTLVDKLAASYRFGGQASDWILPLHSSVSSTDQKKVFLRAPENI 939

Query: 182  RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQXXXXXXXXXXX 241
            RKVI+ATNIAETSITIDDVVYVID G+HKENRYNPQKKLSSMVEDWIS+           
Sbjct: 940  RKVIVATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISKANARQRRGRAG 999

Query: 242  XXXXXTCFCLYTHHRYEKLMRPFQVP 301
                  CFCLYT +R+EKLMRPFQVP
Sbjct: 1000 RVKPGICFCLYTRYRFEKLMRPFQVP 1025

Query: 302   361
            
Sbjct: 1060  1025

Query: 362   421
            
Sbjct: 1120  1025

Query: 422   481
            
Sbjct: 1180  1025

Query: 482   541
            
Sbjct: 1240  1025

Query: 542   601
            
Sbjct: 1300  1025

Query: 602   661
            
Sbjct: 1360  1025

Query: 662   721
            
Sbjct: 1420  1025

Query: 722   781
            
Sbjct: 1480  1025

Query: 782   800
            
Sbjct: 1540  1025

[Close]

BLAST of MU56859 vs. TAIR10
Match: AT1G58060.1 (AT1G58060.1 RNA helicase family protein)

HSP 1 Score: 370.9 bits (951), Expect = 6.4e-103
Identity = 181/266 (68.05%), Postives = 211/266 (79.32%), Query Frame = 2


Query: 2    GNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKN 61
            G+CPVITA+GR HPVTT+FLE+IYES  Y LA DSPAA+R + S   K   VN RRGKKN
Sbjct: 793  GHCPVITAQGRTHPVTTHFLEEIYESINYLLAPDSPAALRSDTSIKDKLGSVNDRRGKKN 852

Query: 62   LILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKT 121
            L+L+GWGDD LLSE C NP+Y S  Y SYS+ T +NL+RLNE  IDY+LLE+L+ H+D T
Sbjct: 853  LVLAGWGDDYLLSEDCLNPFYVSSNYNSYSDQTQQNLKRLNEDRIDYELLEELICHIDDT 912

Query: 122  FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI 181
             +EGAIL+FLPGV+EI++L D LAASY+F G A+DW+LPLHSSIAS++Q+KVFLRPP G+
Sbjct: 913  CEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWLLPLHSSIASSEQRKVFLRPPKGL 972

Query: 182  RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQXXXXXXXXXXX 241
            RKVI ATNIAETSITIDDVVYVIDSG+HKENRYNPQKKLSSMVEDWISQ           
Sbjct: 973  RKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAG 1032

Query: 242  XXXXXTCFCLYTHHRYEKLMRPFQVP 301
                  CF LYT +R+EKLMRP+QVP
Sbjct: 1033 RVKPGICFSLYTRYRFEKLMRPYQVP 1058

Query: 302   361
            
Sbjct: 1093  1058

Query: 362   421
            
Sbjct: 1153  1058

Query: 422   481
            
Sbjct: 1213  1058

Query: 482   541
            
Sbjct: 1273  1058

Query: 542   601
            
Sbjct: 1333  1058

Query: 602   661
            
Sbjct: 1393  1058

Query: 662   721
            
Sbjct: 1453  1058

Query: 722   781
            
Sbjct: 1513  1058

Query: 782   800
            
Sbjct: 1573  1058

[Close]

BLAST of MU56859 vs. TAIR10
Match: AT1G58050.1 (AT1G58050.1 RNA helicase family protein)

HSP 1 Score: 333.2 bits (853), Expect = 1.5e-91
Identity = 169/266 (63.53%), Postives = 195/266 (73.31%), Query Frame = 2


Query: 2    GNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKN 61
            G CP+ITA+GR HPVTTYFLEDIYE T Y LASDSPAA+  + S   K   VN  RGKKN
Sbjct: 773  GQCPIITAQGRTHPVTTYFLEDIYERTKYLLASDSPAALSSDTSITDKLGSVNVPRGKKN 832

Query: 62   LILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKT 121
            L+L+GWGD  L+SE   N  Y+S  Y             +   V+DYDLLE+L+ H+D T
Sbjct: 833  LMLAGWGDSYLVSEDSLNTSYDSIKY-------------IASAVVDYDLLEELICHIDDT 892

Query: 122  FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI 181
             +EGAILVFLPG+SEI++L +RLAASY+F G + DW+LPLHSSIAST+QKKVFLRPP GI
Sbjct: 893  CEEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWLLPLHSSIASTEQKKVFLRPPKGI 952

Query: 182  RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQXXXXXXXXXXX 241
            RKVIIATNIAETSITI+DVVYVIDSG+HKENRYNP KKLSSMVEDW+S+           
Sbjct: 953  RKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQRMGRAG 1012

Query: 242  XXXXXTCFCLYTHHRYEKLMRPFQVP 301
                  CF LYT HR+EKLMRP+QVP
Sbjct: 1013 RVKPGHCFSLYTRHRFEKLMRPYQVP 1025

Query: 302   361
            
Sbjct: 1073  1025

Query: 362   421
            
Sbjct: 1133  1025

Query: 422   481
            
Sbjct: 1193  1025

Query: 482   541
            
Sbjct: 1253  1025

Query: 542   601
            
Sbjct: 1313  1025

Query: 602   661
            
Sbjct: 1373  1025

Query: 662   721
            
Sbjct: 1433  1025

Query: 722   781
            
Sbjct: 1493  1025

Query: 782   800
            
Sbjct: 1553  1025

[Close]

BLAST of MU56859 vs. TAIR10
Match: AT2G35920.1 (AT2G35920.1 RNA helicase family protein)

HSP 1 Score: 139.0 bits (349), Expect = 4.1e-33
Identity = 92/266 (34.59%), Postives = 134/266 (50.38%), Query Frame = 2


Query: 2   GNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKN 61
           GN P +   G   PV   FLED+ E + Y++ S       Y+ SS          RG++ 
Sbjct: 397 GNSPTMHIPGFTFPVAELFLEDVLEKSRYNIKSSDSG--NYQGSS----------RGRRR 456

Query: 62  LILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKT 121
              S   D   L E       NS  Y+SYS  T  +LE  +   ID DL+E  + H+ + 
Sbjct: 457 ESESKKDDLTTLFEDID---INSH-YKSYSSATRNSLEAWSGAQIDVDLVEATIEHICRL 516

Query: 122 FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI 181
              GAILVFL G  EI  L +++  +   G  +   +LPLH S+ + +Q+++F RPP   
Sbjct: 517 EGGGAILVFLTGWDEISKLLEKINMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNK 576

Query: 182 RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQXXXXXXXXXXX 241
           RK+++ATNIAE+SITIDDVVYV+D G+ KE  Y+   K++ ++  WIS+           
Sbjct: 577 RKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAG 636

Query: 242 XXXXXTCFCLYTHHRYEKLMRPFQVP 301
                 C+ LY    Y+   + +Q+P
Sbjct: 637 RVQAGVCYRLYPKVIYDAFPQ-YQLP 645

Query: 302  361
           
Sbjct: 697  645

Query: 362  421
           
Sbjct: 757  645

Query: 422  481
           
Sbjct: 817  645

Query: 482  541
           
Sbjct: 877  645

Query: 542  601
           
Sbjct: 937  645

Query: 602  661
           
Sbjct: 997  645

Query: 662  721
           
Sbjct: 1057  645

Query: 722  781
           
Sbjct: 1117  645

Query: 782  800
           
Sbjct: 1177  645

[Close]

BLAST of MU56859 vs. TAIR10
Match: AT1G48650.2 (AT1G48650.2 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 133.7 bits (335), Expect = 1.7e-31
Identity = 82/257 (31.91%), Postives = 129/257 (50.19%), Query Frame = 2


Query: 2   GNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKN 61
           G  P +   G  +PV  +FLED  E++GY L + +      E  + K      +++ K  
Sbjct: 468 GGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQKQAQFKKRKS- 527

Query: 62  LILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKT 121
                     L+S A  +    +D ++ Y+  T  +L   +   I ++L+E+++ H+ K 
Sbjct: 528 ----------LISSAVEDALEAAD-FKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKG 587

Query: 122 FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI 181
              GA+LVF+ G  +I+ L ++L A    G      +L  H S+AS++Q+ +F RPP GI
Sbjct: 588 ERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGI 647

Query: 182 RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQXXXXXXXXXXX 241
           RK+++ATN+AETSITI+DVVYVID G+ KE  Y+       ++  WIS+           
Sbjct: 648 RKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAG 707

Query: 242 XXXXXTCFCLYTHHRYE 301
                 C+ LY    YE
Sbjct: 708 RVMPGECYHLYPRCVYE 712

Query: 302  361
           
Sbjct: 768  712

Query: 362  421
           
Sbjct: 828  712

Query: 422  481
           
Sbjct: 888  712

Query: 482  541
           
Sbjct: 948  712

Query: 542  601
           
Sbjct: 1008  712

Query: 602  661
           
Sbjct: 1068  712

Query: 662  721
           
Sbjct: 1128  712

Query: 722  773
           
Sbjct: 1188  712

[Close]

BLAST of MU56859 vs. TAIR10
Match: AT5G04895.1 (AT5G04895.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 128.3 bits (321), Expect = 7.3e-30
Identity = 82/266 (30.83%), Postives = 126/266 (47.37%), Query Frame = 2


Query: 2   GNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKN 61
           G  P I   G  HPV  +FLED+ E TGY L S +      +  + K    +  R+ K  
Sbjct: 429 GGAPTIHIPGFTHPVKAHFLEDVLEITGYKLTSFNQVDDYGQEKTWKTQKQLMPRKRKNQ 488

Query: 62  LILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKT 121
           +         L+ EA +   +     +SY+  T  +L       I ++L+E ++ H+ + 
Sbjct: 489 IT-------TLVEEALSKSNF-----ESYNSRTRDSLSSWMPDCIGFNLIEAVLCHICRK 548

Query: 122 FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI 181
              GA+LVFL G  +I  L D++ A    G      +L  H S+A+ +Q+ +F R P  I
Sbjct: 549 ERPGAVLVFLTGWDDIRSLSDQIKAHPLLGDPNRVLLLMCHGSMATAEQRLIFERAPPNI 608

Query: 182 RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQXXXXXXXXXXX 241
           RK+++ATN+AE SITI+DVV+V+D G+ KE  Y+       ++  WISQ           
Sbjct: 609 RKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAG 668

Query: 242 XXXXXTCFCLYTHHRYEKLMRPFQVP 301
                 C+ LY    Y+     +Q+P
Sbjct: 669 RLFPGECYHLYPKCVYDAFAE-YQLP 681

Query: 302  361
           
Sbjct: 729  681

Query: 362  421
           
Sbjct: 789  681

Query: 422  481
           
Sbjct: 849  681

Query: 482  541
           
Sbjct: 909  681

Query: 542  601
           
Sbjct: 969  681

Query: 602  661
           
Sbjct: 1029  681

Query: 662  721
           
Sbjct: 1089  681

Query: 722  781
           
Sbjct: 1149  681

Query: 782  800
           
Sbjct: 1209  681

[Close]

BLAST of MU56859 vs. NCBI nr
Match: gi|659112042|ref|XP_008456037.1| (PREDICTED: ATP-dependent RNA helicase DHX36 isoform X2 [Cucumis melo])

HSP 1 Score: 511.5 bits (1316), Expect = 8.6e-142
Identity = 250/266 (93.98%), Postives = 250/266 (93.98%), Query Frame = 2


Query: 2   GNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKN 61
           GNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKN
Sbjct: 663 GNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKN 722

Query: 62  LILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKT 121
           LILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKT
Sbjct: 723 LILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKT 782

Query: 122 FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI 181
           FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI
Sbjct: 783 FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI 842

Query: 182 RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQXXXXXXXXXXX 241
           RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQ           
Sbjct: 843 RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQANARQRRGRAG 902

Query: 242 XXXXXTCFCLYTHHRYEKLMRPFQVP 301
                TCFCLYTHHRYEKLMRPFQVP
Sbjct: 903 RVRPGTCFCLYTHHRYEKLMRPFQVP 928

Query: 302  361
           
Sbjct: 963  928

Query: 362  421
           
Sbjct: 1023  928

Query: 422  481
           
Sbjct: 1083  928

Query: 482  541
           
Sbjct: 1143  928

Query: 542  601
           
Sbjct: 1203  928

Query: 602  661
           
Sbjct: 1263  928

Query: 662  721
           
Sbjct: 1323  928

Query: 722  781
           
Sbjct: 1383  928

Query: 782  800
           
Sbjct: 1443  928

[Close]

BLAST of MU56859 vs. NCBI nr
Match: gi|659112040|ref|XP_008456036.1| (PREDICTED: ATP-dependent RNA helicase DHX29 isoform X1 [Cucumis melo])

HSP 1 Score: 511.5 bits (1316), Expect = 8.6e-142
Identity = 250/266 (93.98%), Postives = 250/266 (93.98%), Query Frame = 2


Query: 2    GNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKN 61
            GNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKN
Sbjct: 817  GNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKN 876

Query: 62   LILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKT 121
            LILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKT
Sbjct: 877  LILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKT 936

Query: 122  FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI 181
            FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI
Sbjct: 937  FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI 996

Query: 182  RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQXXXXXXXXXXX 241
            RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQ           
Sbjct: 997  RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQANARQRRGRAG 1056

Query: 242  XXXXXTCFCLYTHHRYEKLMRPFQVP 301
                 TCFCLYTHHRYEKLMRPFQVP
Sbjct: 1057 RVRPGTCFCLYTHHRYEKLMRPFQVP 1082

Query: 302   361
            
Sbjct: 1117  1082

Query: 362   421
            
Sbjct: 1177  1082

Query: 422   481
            
Sbjct: 1237  1082

Query: 482   541
            
Sbjct: 1297  1082

Query: 542   601
            
Sbjct: 1357  1082

Query: 602   661
            
Sbjct: 1417  1082

Query: 662   721
            
Sbjct: 1477  1082

Query: 722   781
            
Sbjct: 1537  1082

Query: 782   800
            
Sbjct: 1597  1082

[Close]

BLAST of MU56859 vs. NCBI nr
Match: gi|778680313|ref|XP_011651287.1| (PREDICTED: ATP-dependent RNA helicase DHX29 isoform X1 [Cucumis sativus])

HSP 1 Score: 503.8 bits (1296), Expect = 1.8e-139
Identity = 244/266 (91.73%), Postives = 248/266 (93.23%), Query Frame = 2


Query: 2    GNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKN 61
            GNCPVITAEGR+HPVTTYFLEDIYESTGYHLASDSPAA+RYEVSSGKK+APVNYRRGKKN
Sbjct: 817  GNCPVITAEGRMHPVTTYFLEDIYESTGYHLASDSPAAVRYEVSSGKKNAPVNYRRGKKN 876

Query: 62   LILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKT 121
            LILSGWGDD LLSEACTNPYYNSDCYQSYSELT KNLERLNEH+IDYDLLEDLVIHVDKT
Sbjct: 877  LILSGWGDDALLSEACTNPYYNSDCYQSYSELTQKNLERLNEHIIDYDLLEDLVIHVDKT 936

Query: 122  FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI 181
            FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI
Sbjct: 937  FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI 996

Query: 182  RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQXXXXXXXXXXX 241
            RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQ           
Sbjct: 997  RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQANARQRRGRAG 1056

Query: 242  XXXXXTCFCLYTHHRYEKLMRPFQVP 301
                 TCFCLYTHHRYEKLMRPFQVP
Sbjct: 1057 RVRPGTCFCLYTHHRYEKLMRPFQVP 1082

Query: 302   361
            
Sbjct: 1117  1082

Query: 362   421
            
Sbjct: 1177  1082

Query: 422   481
            
Sbjct: 1237  1082

Query: 482   541
            
Sbjct: 1297  1082

Query: 542   601
            
Sbjct: 1357  1082

Query: 602   661
            
Sbjct: 1417  1082

Query: 662   721
            
Sbjct: 1477  1082

Query: 722   781
            
Sbjct: 1537  1082

Query: 782   800
            
Sbjct: 1597  1082

[Close]

BLAST of MU56859 vs. NCBI nr
Match: gi|778680315|ref|XP_011651288.1| (PREDICTED: ATP-dependent RNA helicase DHX36 isoform X2 [Cucumis sativus])

HSP 1 Score: 503.8 bits (1296), Expect = 1.8e-139
Identity = 244/266 (91.73%), Postives = 248/266 (93.23%), Query Frame = 2


Query: 2   GNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKN 61
           GNCPVITAEGR+HPVTTYFLEDIYESTGYHLASDSPAA+RYEVSSGKK+APVNYRRGKKN
Sbjct: 663 GNCPVITAEGRMHPVTTYFLEDIYESTGYHLASDSPAAVRYEVSSGKKNAPVNYRRGKKN 722

Query: 62  LILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKT 121
           LILSGWGDD LLSEACTNPYYNSDCYQSYSELT KNLERLNEH+IDYDLLEDLVIHVDKT
Sbjct: 723 LILSGWGDDALLSEACTNPYYNSDCYQSYSELTQKNLERLNEHIIDYDLLEDLVIHVDKT 782

Query: 122 FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI 181
           FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI
Sbjct: 783 FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI 842

Query: 182 RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQXXXXXXXXXXX 241
           RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQ           
Sbjct: 843 RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQANARQRRGRAG 902

Query: 242 XXXXXTCFCLYTHHRYEKLMRPFQVP 301
                TCFCLYTHHRYEKLMRPFQVP
Sbjct: 903 RVRPGTCFCLYTHHRYEKLMRPFQVP 928

Query: 302  361
           
Sbjct: 963  928

Query: 362  421
           
Sbjct: 1023  928

Query: 422  481
           
Sbjct: 1083  928

Query: 482  541
           
Sbjct: 1143  928

Query: 542  601
           
Sbjct: 1203  928

Query: 602  661
           
Sbjct: 1263  928

Query: 662  721
           
Sbjct: 1323  928

Query: 722  781
           
Sbjct: 1383  928

Query: 782  800
           
Sbjct: 1443  928

[Close]

BLAST of MU56859 vs. NCBI nr
Match: gi|694325598|ref|XP_009353736.1| (PREDICTED: ATP-dependent RNA helicase DHX36 [Pyrus x bretschneideri])

HSP 1 Score: 399.4 bits (1025), Expect = 4.8e-108
Identity = 195/266 (73.31%), Postives = 218/266 (81.95%), Query Frame = 2


Query: 2    GNCPVITAEGRVHPVTTYFLEDIYESTGYHLASDSPAAIRYEVSSGKKSAPVNYRRGKKN 61
            GNCPVITAEGR HPVTTY+LEDIYES  Y +ASDSPA++RY   + +K+ PVN RRGKKN
Sbjct: 771  GNCPVITAEGRTHPVTTYYLEDIYESIDYRIASDSPASMRYGALTKEKAGPVNNRRGKKN 830

Query: 62   LILSGWGDDVLLSEACTNPYYNSDCYQSYSELTHKNLERLNEHVIDYDLLEDLVIHVDKT 121
            L+LSGWGDD LLSE   NPYY  D YQSY E T +NL+R+NE VIDYDLLEDLV HVD+T
Sbjct: 831  LVLSGWGDDSLLSEETINPYYVPDSYQSYKEQTRQNLQRVNEDVIDYDLLEDLVCHVDET 890

Query: 122  FDEGAILVFLPGVSEIHLLYDRLAASYQFGGQASDWILPLHSSIASTDQKKVFLRPPYGI 181
             +EGAILVFLPGVSEI+ L D+L+ASY+FGG ASDWILPLHSS+ASTDQKKVFLR P  I
Sbjct: 891  CNEGAILVFLPGVSEIYTLVDKLSASYRFGGPASDWILPLHSSVASTDQKKVFLRAPENI 950

Query: 182  RKVIIATNIAETSITIDDVVYVIDSGRHKENRYNPQKKLSSMVEDWISQXXXXXXXXXXX 241
            RKVI+ATNIAETSITIDDVVYVID G+HKENRYNPQKKLSSMVEDWIS+           
Sbjct: 951  RKVIVATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISRANARQRRGRAG 1010

Query: 242  XXXXXTCFCLYTHHRYEKLMRPFQVP 301
                  CFCLYT +R+EKLMRPFQVP
Sbjct: 1011 RVKPGICFCLYTRYRFEKLMRPFQVP 1036

Query: 302   361
            
Sbjct: 1071  1036

Query: 362   421
            
Sbjct: 1131  1036

Query: 422   481
            
Sbjct: 1191  1036

Query: 482   541
            
Sbjct: 1251  1036

Query: 542   601
            
Sbjct: 1311  1036

Query: 602   661
            
Sbjct: 1371  1036

Query: 662   721
            
Sbjct: 1431  1036

Query: 722   781
            
Sbjct: 1491  1036

Query: 782   800
            
Sbjct: 1551  1036

The following BLAST results are available for this feature:

BLAST of MU56859 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DEXH7_ARATH	1.1e-101	68.05	DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana...	[more]
DEXH4_ARATH	2.6e-90	63.53	DExH-box ATP-dependent RNA helicase DExH4, chloroplastic OS=Arabidopsis thaliana...	[more]
DHX29_MOUSE	6.2e-39	34.94	ATP-dependent RNA helicase Dhx29 OS=Mus musculus GN=Dhx29 PE=1 SV=1	[more]
DHX29_XENLA	1.4e-38	35.64	ATP-dependent RNA helicase DHX29 OS=Xenopus laevis GN=dhx29 PE=2 SV=1	[more]
DHX29_HUMAN	6.8e-38	34.93	ATP-dependent RNA helicase DHX29 OS=Homo sapiens GN=DHX29 PE=1 SV=2	[more]

BLAST of MU56859 vs. TrEMBL


Match Name	E-value	Identity	Description
B9SSN0_RICCO	1.7e-107	72.56	ATP-dependent RNA helicase, putative OS=Ricinus communis GN=RCOM_1374260 PE=4 SV...	[more]
A0A061DYH6_THECC	2.4e-106	73.31	ATP-dependent RNA helicase, putative isoform 1 OS=Theobroma cacao GN=TCM_006225 ...	[more]
A0A061E4D8_THECC	2.4e-106	73.31	ATP-dependent RNA helicase, putative isoform 4 OS=Theobroma cacao GN=TCM_006225 ...	[more]
A0A061DXK0_THECC	2.4e-106	73.31	ATP-dependent RNA helicase, putative isoform 3 OS=Theobroma cacao GN=TCM_006225 ...	[more]
M5XY08_PRUPE	3.1e-106	72.93	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000230mg PE=4 SV=1	[more]

BLAST of MU56859 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G58060.1	6.4e-103	68.05	RNA helicase family protein	[more]
AT1G58050.1	1.5e-91	63.53	RNA helicase family protein	[more]
AT2G35920.1	4.1e-33	34.59	RNA helicase family protein	[more]
AT1G48650.2	1.7e-31	31.91	DEA(D/H)-box RNA helicase family protein	[more]
AT5G04895.1	7.3e-30	30.83	DEA(D/H)-box RNA helicase family protein	[more]

BLAST of MU56859 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659112042\|ref\|XP_008456037.1\|	8.6e-142	93.98	PREDICTED: ATP-dependent RNA helicase DHX36 isoform X2 [Cucumis melo]	[more]
gi\|659112040\|ref\|XP_008456036.1\|	8.6e-142	93.98	PREDICTED: ATP-dependent RNA helicase DHX29 isoform X1 [Cucumis melo]	[more]
gi\|778680313\|ref\|XP_011651287.1\|	1.8e-139	91.73	PREDICTED: ATP-dependent RNA helicase DHX29 isoform X1 [Cucumis sativus]	[more]
gi\|778680315\|ref\|XP_011651288.1\|	1.8e-139	91.73	PREDICTED: ATP-dependent RNA helicase DHX36 isoform X2 [Cucumis sativus]	[more]
gi\|694325598\|ref\|XP_009353736.1\|	4.8e-108	73.31	PREDICTED: ATP-dependent RNA helicase DHX36 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR001650	Helicase_C
IPR027417	P-loop_NTPase

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C019422	MELO3C019422	gene
MELO3C019421	MELO3C019421	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
A34E08	A34E08	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 119..243 score: 1.4
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 138..244 score: 1.7
IPR001650	Helicase, C-terminal	PROFILE	PS51194	HELICASE_CTER	coord: 110..268 score: 14
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 111..260 score: 8.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 97..258 score: 1.25
None	No IPR available	PANTHER	PTHR18934	ATP-DEPENDENT RNA HELICASE	coord: 100..267 score: 4.1E-123coord: 2..35 score: 4.1E
None	No IPR available	PANTHER	PTHR18934:SF145	ATP-DEPENDENT RNA HELICASE DHX57-RELATED	coord: 100..267 score: 4.1E-123coord: 2..35 score: 4.1E