MELO3C018234 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C018234
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Glutathione-regulated potassium-efflux system protein KefB
Location	chr4 : 7984662 .. 7985201 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCTCCAAATTTTCTATCTCCCTCTTCCATTTTAATTATTCAAAAAAAGAAAAACAAATGCCGACCATTTTTCAGTCCCAACCCCCCCCTCGCCGGAGCCCCTCCGTTGCTGGAAGAGAAGCTGGCCGGACCCGTGCCGTTAGATCCACTTGCAGGAGCCTTAGTTTTGGTGGGATGGTTAGAGGTGGCCGGAATCTGATGGCGCTTCCCGGAGATAGATGCCGCCGGAATCAGGGAAGCAGAGAGGTTTTAAGAAGGGCTTTGATGCCGCCGAGCCGGAGACCCACACTTCGGTGGATGAATTTCCGTCCAACTCCCAGTCGTCTTTCGATGATGTCCATGGCGGAAAGTTAAATCATTAATTTTGTTTTTTGGGATTATTCTTTTATTCTTATTCAACAAATTTCTGGGATTTTCGTTGTATGCTTGGAGAATCTATGGATGATTGAGTTCCTAATATTTTGAGTGAAAATTCGGAATTCTTCGTGGTTTTGTTTATTAACTTTTCATCAATTTTTTGGTGTGTAATGCTTGACC

mRNA sequence

TTCTTCTCCAAATTTTCTATCTCCCTCTTCCATTTTAATTATTCAAAAAAAGAAAAACAAATGCCGACCATTTTTCAGTCCCAACCCCCCCCTCGCCGGAGCCCCTCCGTTGCTGGAAGAGAAGCTGGCCGGACCCGTGCCGTTAGATCCACTTGCAGGAGCCTTAGTTTTGGTGGGATGGTTAGAGGTGGCCGGAATCTGATGGCGCTTCCCGGAGATAGATGCCGCCGGAATCAGGGAAGCAGAGAGGTTTTAAGAAGGGCTTTGATGCCGCCGAGCCGGAGACCCACACTTCGGTGGATGAATTTCCGTCCAACTCCCAGTCGTCTTTCGATGATGTCCATGGCGGAAAGTTAAATCATTAATTTTGTTTTTTGGGATTATTCTTTTATTCTTATTCAACAAATTTCTGGGATTTTCGTTGTATGCTTGGAGAATCTATGGATGATTGAGTTCCTAATATTTTGAGTGAAAATTCGGAATTCTTCGTGGTTTTGTTTATTAACTTTTCATCAATTTTTTGGTGTGTAATGCTTGACC

Coding sequence (CDS)

ATGCCGACCATTTTTCAGTCCCAACCCCCCCCTCGCCGGAGCCCCTCCGTTGCTGGAAGAGAAGCTGGCCGGACCCGTGCCGTTAGATCCACTTGCAGGAGCCTTAGTTTTGGTGGGATGGTTAGAGGTGGCCGGAATCTGATGGCGCTTCCCGGAGATAGATGCCGCCGGAATCAGGGAAGCAGAGAGGTTTTAAGAAGGGCTTTGATGCCGCCGAGCCGGAGACCCACACTTCGGTGGATGAATTTCCGTCCAACTCCCAGTCGTCTTTCGATGATGTCCATGGCGGAAAGTTAA

Protein sequence

MPTIFQSQPPPRRSPSVAGREAGRTRAVRSTCRSLSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSMMSMAES*

Homology

[Close]

BLAST of MELO3C018234 vs. TrEMBL
Match: A0A0A0LD23_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G852440 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.4e-46
Identity = 93/98 (94.90%), Postives = 95/98 (96.94%), Query Frame = 1


Query: 1  MPTIFQSQPPPRRSPSVAGREAGRTRAVRSTCRSLSFGGMVRGGRNLMALPGDRCRRNQG 60
          MPTIFQSQPPPRR+PSVAGRE GR RAVRSTCRS SFGGMVRGGRNLMALPGDRCRRNQG
Sbjct: 1  MPTIFQSQPPPRRTPSVAGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQG 60

Query: 61 SREVLRRALMPPSRRPTLRWMNFRPTPSRLSMMSMAES 99
          SREVLRRALMPPSRRPTLRWMNFRPTPSRLS+MSMAES
Sbjct: 61 SREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAES 98

[Close]

BLAST of MELO3C018234 vs. TrEMBL
Match: B9N1L2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41500g PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 5.2e-14
Identity = 51/108 (47.22%), Postives = 60/108 (55.56%), Query Frame = 1


Query: 1   MPTIFQSQP-----PPRRSPSVAGREAGRTRAV-------RSTCRSLSFGGMVRGGRNLM 60
           M TI Q Q      PP R     G    R   V       RSTC   +  G VR  ++  
Sbjct: 1   METISQKQTRGRLQPPARQSLGEGNRVRRNNQVASISPRPRSTCTCSNRPGSVRCSKHGY 60

Query: 61  ALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSMMSMA 97
            +P D+ RRNQ + E+LRRAL PP+RR TLRW NF+PTPSRLS MSMA
Sbjct: 61  LVPSDKLRRNQANTEILRRALAPPNRRLTLRWFNFQPTPSRLSNMSMA 108

[Close]

BLAST of MELO3C018234 vs. TrEMBL
Match: A0A072VBI5_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_2g080030 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.2e-12
Identity = 42/92 (45.65%), Postives = 58/92 (63.04%), Query Frame = 1


Query: 8   QPPPRRSPSVAGREAG---RTRAVRSTCRSLSFGGMVRGGRNLMALPGDRCRRNQGSREV 67
           Q PP+ S S   +  G    ++  R  C  L+  G VR  R+   +PG+R ++   S+E+
Sbjct: 18  QLPPKMSFSGQNKNEGYMSMSQRFRPACTCLNRPGSVRCARHGYVVPGERLKKRLASKEI 77

Query: 68  LRRALMPPSRRPTLRWMNFRPTPSRLSMMSMA 97
           LRRAL PP +R  LRW+NF+PTPSRLS+MSMA
Sbjct: 78  LRRALTPPPKRLGLRWLNFKPTPSRLSIMSMA 109

[Close]

BLAST of MELO3C018234 vs. TrEMBL
Match: B9HZY7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s12430g PE=4 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 2.8e-12
Identity = 41/69 (59.42%), Postives = 51/69 (73.91%), Query Frame = 1


Query: 29  RSTCRSLSFGGMVRGGRNLMALPGDRC-RRNQGSREVLRRALMPPSRRPTLRWMNFRPTP 88
           RSTC   +  G VR  ++   +PGD+  RR+Q ++E+LRRAL PP+RR TLRW NFRPTP
Sbjct: 41  RSTCTCSNRPGSVRCSKHGYMVPGDKLIRRHQANKELLRRALAPPNRRLTLRWFNFRPTP 100

Query: 89  SRLSMMSMA 97
           SRLS MSMA
Sbjct: 101 SRLSNMSMA 109

[Close]

BLAST of MELO3C018234 vs. TrEMBL
Match: B9T365_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0129360 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.7e-12
Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = 1


Query: 29  RSTCRSLSFGGMVRGGRNLMALPGDRCRRN-QGSREVLRRALMPPSRRPTLRWMNFRPTP 88
           RSTC   +  G VR  ++   LP D+ RR+ Q SRE+LRRAL PP+R+ +LRW NFRPTP
Sbjct: 49  RSTCTCSNRPGSVRCSKHGYVLPSDKLRRHHQASREILRRALAPPNRKMSLRWWNFRPTP 108

Query: 89  SRLSMMSMA 97
           SRLS MSMA
Sbjct: 109 SRLSNMSMA 117

[Close]

BLAST of MELO3C018234 vs. TAIR10
Match: AT3G15518.1 (AT3G15518.1 unknown protein)

HSP 1 Score: 65.9 bits (159), Expect = 1.6e-11
Identity = 40/89 (44.94%), Postives = 47/89 (52.81%), Query Frame = 1


Query: 11  PRRSPS--VAGREAGRTRAVRSTCRSLSFGGMVRGGRNLMALPGDRC---RRNQGSREVL 70
           P RS +  +  R  G    VR  C      G  +  R+   +P D     + + GSREVL
Sbjct: 16  PGRSETNRIRRRSHGSGLRVRVACTCSGRPGSTKCARHGFVVPSDERLMRKASDGSREVL 75

Query: 71  RRALMPPSRRPTLRWMNFRPTPSRLSMMS 95
           RRAL PP RR  LRW+NFRPTPSRL  MS
Sbjct: 76  RRALTPPIRRMNLRWLNFRPTPSRLCKMS 104

[Close]

BLAST of MELO3C018234 vs. NCBI nr
Match: gi|659109339|ref|XP_008454664.1| (PREDICTED: uncharacterized protein LOC103495017 [Cucumis melo])

HSP 1 Score: 201.4 bits (511), Expect = 7.1e-49
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 1


Query: 1  MPTIFQSQPPPRRSPSVAGREAGRTRAVRSTCRSLSFGGMVRGGRNLMALPGDRCRRNQG 60
          MPTIFQSQPPPRRSPSVAGREAGRTRAVRSTCRSLSFGGMVRGGRNLMALPGDRCRRNQG
Sbjct: 1  MPTIFQSQPPPRRSPSVAGREAGRTRAVRSTCRSLSFGGMVRGGRNLMALPGDRCRRNQG 60

Query: 61 SREVLRRALMPPSRRPTLRWMNFRPTPSRLSMMSMAES 99
          SREVLRRALMPPSRRPTLRWMNFRPTPSRLSMMSMAES
Sbjct: 61 SREVLRRALMPPSRRPTLRWMNFRPTPSRLSMMSMAES 98

[Close]

BLAST of MELO3C018234 vs. NCBI nr
Match: gi|778688989|ref|XP_011652880.1| (PREDICTED: uncharacterized protein LOC105435142 [Cucumis sativus])

HSP 1 Score: 193.4 bits (490), Expect = 1.9e-46
Identity = 93/98 (94.90%), Postives = 95/98 (96.94%), Query Frame = 1


Query: 1  MPTIFQSQPPPRRSPSVAGREAGRTRAVRSTCRSLSFGGMVRGGRNLMALPGDRCRRNQG 60
          MPTIFQSQPPPRR+PSVAGRE GR RAVRSTCRS SFGGMVRGGRNLMALPGDRCRRNQG
Sbjct: 1  MPTIFQSQPPPRRTPSVAGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQG 60

Query: 61 SREVLRRALMPPSRRPTLRWMNFRPTPSRLSMMSMAES 99
          SREVLRRALMPPSRRPTLRWMNFRPTPSRLS+MSMAES
Sbjct: 61 SREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAES 98

[Close]

BLAST of MELO3C018234 vs. NCBI nr
Match: gi|566154106|ref|XP_006370308.1| (hypothetical protein POPTR_0001s41500g [Populus trichocarpa])

HSP 1 Score: 85.1 bits (209), Expect = 7.4e-14
Identity = 51/108 (47.22%), Postives = 60/108 (55.56%), Query Frame = 1


Query: 1   MPTIFQSQP-----PPRRSPSVAGREAGRTRAV-------RSTCRSLSFGGMVRGGRNLM 60
           M TI Q Q      PP R     G    R   V       RSTC   +  G VR  ++  
Sbjct: 1   METISQKQTRGRLQPPARQSLGEGNRVRRNNQVASISPRPRSTCTCSNRPGSVRCSKHGY 60

Query: 61  ALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSMMSMA 97
            +P D+ RRNQ + E+LRRAL PP+RR TLRW NF+PTPSRLS MSMA
Sbjct: 61  LVPSDKLRRNQANTEILRRALAPPNRRLTLRWFNFQPTPSRLSNMSMA 108

[Close]

BLAST of MELO3C018234 vs. NCBI nr
Match: gi|922392698|ref|XP_013464758.1| (hypothetical protein MTR_2g080030 [Medicago truncatula])

HSP 1 Score: 79.7 bits (195), Expect = 3.1e-12
Identity = 42/92 (45.65%), Postives = 58/92 (63.04%), Query Frame = 1


Query: 8   QPPPRRSPSVAGREAG---RTRAVRSTCRSLSFGGMVRGGRNLMALPGDRCRRNQGSREV 67
           Q PP+ S S   +  G    ++  R  C  L+  G VR  R+   +PG+R ++   S+E+
Sbjct: 18  QLPPKMSFSGQNKNEGYMSMSQRFRPACTCLNRPGSVRCARHGYVVPGERLKKRLASKEI 77

Query: 68  LRRALMPPSRRPTLRWMNFRPTPSRLSMMSMA 97
           LRRAL PP +R  LRW+NF+PTPSRLS+MSMA
Sbjct: 78  LRRALTPPPKRLGLRWLNFKPTPSRLSIMSMA 109

[Close]

BLAST of MELO3C018234 vs. NCBI nr
Match: gi|743853132|ref|XP_011029434.1| (PREDICTED: uncharacterized protein LOC105129174 [Populus euphratica])

HSP 1 Score: 79.7 bits (195), Expect = 3.1e-12
Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = 1


Query: 29  RSTCRSLSFGGMVRGGRNLMALPGDRC-RRNQGSREVLRRALMPPSRRPTLRWMNFRPTP 88
           RSTC  L+  G  R  ++   +PGDR  RR+Q ++E+LRRAL PP+RR TLRW  FRPTP
Sbjct: 41  RSTCTCLNRPGSARCSKHGYMVPGDRLMRRHQANKEILRRALAPPNRRLTLRWFTFRPTP 100

Query: 89  SRLSMMSMA 97
           SRLS MSMA
Sbjct: 101 SRLSNMSMA 109

The following BLAST results are available for this feature:

BLAST of MELO3C018234 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LD23_CUCSA	1.4e-46	94.90	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G852440 PE=4 SV=1	[more]
B9N1L2_POPTR	5.2e-14	47.22	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41500g PE=4 SV=1	[more]
A0A072VBI5_MEDTR	2.2e-12	45.65	Uncharacterized protein OS=Medicago truncatula GN=MTR_2g080030 PE=4 SV=1	[more]
B9HZY7_POPTR	2.8e-12	59.42	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s12430g PE=4 SV=2	[more]
B9T365_RICCO	3.7e-12	59.42	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0129360 PE=4 SV=1	[more]

BLAST of MELO3C018234 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15518.1	1.6e-11	44.94	unknown protein	[more]

BLAST of MELO3C018234 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659109339\|ref\|XP_008454664.1\|	7.1e-49	100.00	PREDICTED: uncharacterized protein LOC103495017 [Cucumis melo]	[more]
gi\|778688989\|ref\|XP_011652880.1\|	1.9e-46	94.90	PREDICTED: uncharacterized protein LOC105435142 [Cucumis sativus]	[more]
gi\|566154106\|ref\|XP_006370308.1\|	7.4e-14	47.22	hypothetical protein POPTR_0001s41500g [Populus trichocarpa]	[more]
gi\|922392698\|ref\|XP_013464758.1\|	3.1e-12	45.65	hypothetical protein MTR_2g080030 [Medicago truncatula]	[more]
gi\|743853132\|ref\|XP_011029434.1\|	3.1e-12	59.42	PREDICTED: uncharacterized protein LOC105129174 [Populus euphratica]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU53506	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C018234T1	MELO3C018234T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU53506	MU53506	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C018234	Csa3G852440	Cucumber (Chinese Long) v2	cumeB222
MELO3C018234	Cla023409	Watermelon (97103) v1	mewmB384
MELO3C018234	ClCG11G018300	Watermelon (Charleston Gray)	mewcgB320
MELO3C018234	Cla97C11G224450	Watermelon (97103) v2	mewmbB321
MELO3C018234	Bhi09G001711	Wax gourd	mewgoB436
MELO3C018234	CSPI03G42120	Wild cucumber (PI 183967)	cpimeB215
MELO3C018234	Cucsa.341770	Cucumber (Gy14) v1	cgymeB559
MELO3C018234	CmaCh09G008860	Cucurbita maxima (Rimu)	cmameB033
MELO3C018234	CmoCh09G008740	Cucurbita moschata (Rifu)	cmomeB022
MELO3C018234	CmoCh01G012460	Cucurbita moschata (Rifu)	cmomeB418
MELO3C018234	Lsi04G012990	Bottle gourd (USVL1VR-Ls)	lsimeB312
MELO3C018234	Cp4.1LG06g07060	Cucurbita pepo (Zucchini)	cpemeB727
MELO3C018234	Carg14681	Silver-seed gourd	carmeB0312
MELO3C018234	Carg12757	Silver-seed gourd	carmeB0891
MELO3C018234	CsaV3_3G044520	Cucumber (Chinese Long) v3	cucmeB219

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C018234	Cucurbita pepo (Zucchini)	cpemeB519
MELO3C018234	Cucumber (Gy14) v2	cgybmeB185
MELO3C018234	Cucurbita maxima (Rimu)	cmameB428