MU53506 (transcribed_cluster) Melon (DHL92) v3.5.1

Overview
NameMU53506
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionUnknown protein
Locationchr4 : 7984671 .. 7985202 (+)
Sequence length531
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

AAATTTTCTATCTCCCTCTTCCATTTTAATTATTCAAAAAAAGAAAAACAAATGCCGACCATTTTTCAGTCCCAACCCCCCCCTCGCCGGAGCCCCTCCGTTGCTGGAAGAGAAGCTGGCCGGACCCGTGCCGTTAGATCCACTTGCAGGAGCCTTAGTTTTGGTGGGATGGTTAGAGGTGGCCGGAATCTGATGGCGCTTCCCGGAGATAGATGCCGCCGGAATCAGGGAAGCAGAGAGGTTTTAAGAAGGGCTTTGATGCCGCCGAGCCGGAGACCCACACTTCGGTGGATGAATTTCCGTCCAACTCCCAGTCGTCTTTCGATGATGTCCATGGCGGAAAGTTAAATCATTAATTTTGTTTTTTGGGATTATTCTTTTATTCTTATTCAACAAATTTCTGGGATTTTCGTTGTATGCTTGGAGAATCTATGGATGATTGAGTTCCTAATATTTTGAGTGAAAATTCGGAATTCTTCGTGGTTTTGTTTATTAACTTTTCATCAATTTTTTGGTGTGTAATGCTTGACC
Homology
[Close]
BLAST of MU53506 vs. TrEMBL
Match: A0A0A0LD23_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G852440 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.9e-38
Identity = 83/98 (84.69%), Postives = 84/98 (85.71%), Query Frame = 1 

Query: 52  MPTIFXXXXXXXXXXXVAGREAGRTRAVRSTCRSLSFGGMVRGGRNLMALPGDRCRRNQG 111
           MPTIF           VAGRE GR RAVRSTCRS SFGGMVRGGRNLMALPGDRCRRNQG
Sbjct: 1   MPTIFQSQPPPRRTPSVAGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQG 60

Query: 112 SREVLRRALMPPSRRPTLRWMNFRPTPSRLSMMSMAES 171
           SREVLRRALMPPSRRPTLRWMNFRPTPSRLS+MSMAES
Sbjct: 61  SREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAES 98

Query: 172  231
           
Sbjct: 121  98

Query: 232  291
           
Sbjct: 181  98

Query: 292  346
           
Sbjct: 241  98

[Close]
BLAST of MU53506 vs. TrEMBL
Match: B9N1L2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41500g PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.0e-12
Identity = 40/68 (58.82%), Postives = 49/68 (72.06%), Query Frame = 1 

Query: 136 RSTCRSLSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPS 195
           RSTC   +  G VR  ++   +P D+ RRNQ + E+LRRAL PP+RR TLRW NF+PTPS
Sbjct: 41  RSTCTCSNRPGSVRCSKHGYLVPSDKLRRNQANTEILRRALAPPNRRLTLRWFNFQPTPS 100

Query: 196 RLSMMSMA 255
           RLS MSMA
Sbjct: 101 RLSNMSMA 108

Query: 256  315
           
Sbjct: 161  108

Query: 316  340
           
Sbjct: 221  108

[Close]
BLAST of MU53506 vs. TrEMBL
Match: B9HZY7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s12430g PE=4 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 5.1e-12
Identity = 41/69 (59.42%), Postives = 51/69 (73.91%), Query Frame = 1 

Query: 136 RSTCRSLSFGGMVRGGRNLMALPGDRC-RRNQGSREVLRRALMPPSRRPTLRWMNFRPTP 195
           RSTC   +  G VR  ++   +PGD+  RR+Q ++E+LRRAL PP+RR TLRW NFRPTP
Sbjct: 41  RSTCTCSNRPGSVRCSKHGYMVPGDKLIRRHQANKELLRRALAPPNRRLTLRWFNFRPTP 100

Query: 196 SRLSMMSMA 255
           SRLS MSMA
Sbjct: 101 SRLSNMSMA 109

Query: 256  315
           
Sbjct: 161  109

Query: 316  340
           
Sbjct: 221  109

[Close]
BLAST of MU53506 vs. TrEMBL
Match: B9T365_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0129360 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.6e-12
Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = 1 

Query: 136 RSTCRSLSFGGMVRGGRNLMALPGDRCRRN-QGSREVLRRALMPPSRRPTLRWMNFRPTP 195
           RSTC   +  G VR  ++   LP D+ RR+ Q SRE+LRRAL PP+R+ +LRW NFRPTP
Sbjct: 49  RSTCTCSNRPGSVRCSKHGYVLPSDKLRRHHQASREILRRALAPPNRKMSLRWWNFRPTP 108

Query: 196 SRLSMMSMA 255
           SRLS MSMA
Sbjct: 109 SRLSNMSMA 117

Query: 256  315
           
Sbjct: 169  117

Query: 316  340
           
Sbjct: 229  117

[Close]
BLAST of MU53506 vs. TrEMBL
Match: A0A072VBI5_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_2g080030 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.3e-11
Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 1 

Query: 136 RSTCRSLSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPS 195
           R  C  L+  G VR  R+   +PG+R ++   S+E+LRRAL PP +R  LRW+NF+PTPS
Sbjct: 42  RPACTCLNRPGSVRCARHGYVVPGERLKKRLASKEILRRALTPPPKRLGLRWLNFKPTPS 101

Query: 196 RLSMMSMA 255
           RLS+MSMA
Sbjct: 102 RLSIMSMA 109

Query: 256  315
           
Sbjct: 162  109

Query: 316  340
           
Sbjct: 222  109

[Close]
BLAST of MU53506 vs. TAIR10
Match: AT3G15518.1 (AT3G15518.1 unknown protein)

HSP 1 Score: 65.5 bits (158), Expect = 3.8e-11
Identity = 37/78 (47.44%), Postives = 42/78 (53.85%), Query Frame = 1 

Query: 109 REAGRTRAVRSTCRSLSFGGMVRGGRNLMALPGDRC---RRNQGSREVLRRALMPPSRRP 168
           R  G    VR  C      G  +  R+   +P D     + + GSREVLRRAL PP RR 
Sbjct: 27  RSHGSGLRVRVACTCSGRPGSTKCARHGFVVPSDERLMRKASDGSREVLRRALTPPIRRM 86

Query: 169 TLRWMNFRPTPSRLSMMS 228
            LRW+NFRPTPSRL  MS
Sbjct: 87  NLRWLNFRPTPSRLCKMS 104

Query: 229  288
           
Sbjct: 147  104

Query: 289  334
           
Sbjct: 207  104

[Close]
BLAST of MU53506 vs. NCBI nr
Match: gi|659109339|ref|XP_008454664.1| (PREDICTED: uncharacterized protein LOC103495017 [Cucumis melo])

HSP 1 Score: 171.8 bits (434), Expect = 1.1e-39
Identity = 87/98 (88.78%), Postives = 87/98 (88.78%), Query Frame = 1 

Query: 52  MPTIFXXXXXXXXXXXVAGREAGRTRAVRSTCRSLSFGGMVRGGRNLMALPGDRCRRNQG 111
           MPTIF           VAGREAGRTRAVRSTCRSLSFGGMVRGGRNLMALPGDRCRRNQG
Sbjct: 1   MPTIFQSQPPPRRSPSVAGREAGRTRAVRSTCRSLSFGGMVRGGRNLMALPGDRCRRNQG 60

Query: 112 SREVLRRALMPPSRRPTLRWMNFRPTPSRLSMMSMAES 171
           SREVLRRALMPPSRRPTLRWMNFRPTPSRLSMMSMAES
Sbjct: 61  SREVLRRALMPPSRRPTLRWMNFRPTPSRLSMMSMAES 98

Query: 172  231
           
Sbjct: 121  98

Query: 232  291
           
Sbjct: 181  98

Query: 292  346
           
Sbjct: 241  98

[Close]
BLAST of MU53506 vs. NCBI nr
Match: gi|778688989|ref|XP_011652880.1| (PREDICTED: uncharacterized protein LOC105435142 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 1.3e-37
Identity = 83/98 (84.69%), Postives = 84/98 (85.71%), Query Frame = 1 

Query: 52  MPTIFXXXXXXXXXXXVAGREAGRTRAVRSTCRSLSFGGMVRGGRNLMALPGDRCRRNQG 111
           MPTIF           VAGRE GR RAVRSTCRS SFGGMVRGGRNLMALPGDRCRRNQG
Sbjct: 1   MPTIFQSQPPPRRTPSVAGREPGRNRAVRSTCRSFSFGGMVRGGRNLMALPGDRCRRNQG 60

Query: 112 SREVLRRALMPPSRRPTLRWMNFRPTPSRLSMMSMAES 171
           SREVLRRALMPPSRRPTLRWMNFRPTPSRLS+MSMAES
Sbjct: 61  SREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAES 98

Query: 172  231
           
Sbjct: 121  98

Query: 232  291
           
Sbjct: 181  98

Query: 292  346
           
Sbjct: 241  98

[Close]
BLAST of MU53506 vs. NCBI nr
Match: gi|566154106|ref|XP_006370308.1| (hypothetical protein POPTR_0001s41500g [Populus trichocarpa])

HSP 1 Score: 79.0 bits (193), Expect = 9.5e-12
Identity = 40/68 (58.82%), Postives = 49/68 (72.06%), Query Frame = 1 

Query: 136 RSTCRSLSFGGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPS 195
           RSTC   +  G VR  ++   +P D+ RRNQ + E+LRRAL PP+RR TLRW NF+PTPS
Sbjct: 41  RSTCTCSNRPGSVRCSKHGYLVPSDKLRRNQANTEILRRALAPPNRRLTLRWFNFQPTPS 100

Query: 196 RLSMMSMA 255
           RLS MSMA
Sbjct: 101 RLSNMSMA 108

Query: 256  315
           
Sbjct: 161  108

Query: 316  340
           
Sbjct: 221  108

[Close]
BLAST of MU53506 vs. NCBI nr
Match: gi|743853132|ref|XP_011029434.1| (PREDICTED: uncharacterized protein LOC105129174 [Populus euphratica])

HSP 1 Score: 77.0 bits (188), Expect = 3.6e-11
Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = 1 

Query: 136 RSTCRSLSFGGMVRGGRNLMALPGDRC-RRNQGSREVLRRALMPPSRRPTLRWMNFRPTP 195
           RSTC  L+  G  R  ++   +PGDR  RR+Q ++E+LRRAL PP+RR TLRW  FRPTP
Sbjct: 41  RSTCTCLNRPGSARCSKHGYMVPGDRLMRRHQANKEILRRALAPPNRRLTLRWFTFRPTP 100

Query: 196 SRLSMMSMA 255
           SRLS MSMA
Sbjct: 101 SRLSNMSMA 109

Query: 256  315
           
Sbjct: 161  109

Query: 316  340
           
Sbjct: 221  109

[Close]
BLAST of MU53506 vs. NCBI nr
Match: gi|566195099|ref|XP_002316920.2| (hypothetical protein POPTR_0011s12430g [Populus trichocarpa])

HSP 1 Score: 76.6 bits (187), Expect = 4.7e-11
Identity = 41/69 (59.42%), Postives = 51/69 (73.91%), Query Frame = 1 

Query: 136 RSTCRSLSFGGMVRGGRNLMALPGDRC-RRNQGSREVLRRALMPPSRRPTLRWMNFRPTP 195
           RSTC   +  G VR  ++   +PGD+  RR+Q ++E+LRRAL PP+RR TLRW NFRPTP
Sbjct: 41  RSTCTCSNRPGSVRCSKHGYMVPGDKLIRRHQANKELLRRALAPPNRRLTLRWFNFRPTP 100

Query: 196 SRLSMMSMA 255
           SRLS MSMA
Sbjct: 101 SRLSNMSMA 109

Query: 256  315
           
Sbjct: 161  109

Query: 316  340
           
Sbjct: 221  109

The following BLAST results are available for this feature:
BLAST of MU53506 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LD23_CUCSA1.9e-3884.69Uncharacterized protein OS=Cucumis sativus GN=Csa_3G852440 PE=4 SV=1[more]
B9N1L2_POPTR1.0e-1258.82Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41500g PE=4 SV=1[more]
B9HZY7_POPTR5.1e-1259.42Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s12430g PE=4 SV=2[more]
B9T365_RICCO6.6e-1259.42Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0129360 PE=4 SV=1[more]
A0A072VBI5_MEDTR4.3e-1152.94Uncharacterized protein OS=Medicago truncatula GN=MTR_2g080030 PE=4 SV=1[more]
BLAST of MU53506 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G15518.13.8e-1147.44 unknown protein[more]
BLAST of MU53506 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659109339|ref|XP_008454664.1|1.1e-3988.78PREDICTED: uncharacterized protein LOC103495017 [Cucumis melo][more]
gi|778688989|ref|XP_011652880.1|1.3e-3784.69PREDICTED: uncharacterized protein LOC105435142 [Cucumis sativus][more]
gi|566154106|ref|XP_006370308.1|9.5e-1258.82hypothetical protein POPTR_0001s41500g [Populus trichocarpa][more]
gi|743853132|ref|XP_011029434.1|3.6e-1159.42PREDICTED: uncharacterized protein LOC105129174 [Populus euphratica][more]
gi|566195099|ref|XP_002316920.2|4.7e-1159.42hypothetical protein POPTR_0011s12430g [Populus trichocarpa][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C018234MELO3C018234gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
BA11YK15FM1BA11YK15FM1EST
CA9YP02FM1CA9YP02FM1EST