MELO3C017919 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C017919
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRING finger protein 126
Locationchr7 : 25886609 .. 25887280 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCTTTGCAATTTCTTCTCCAATTCAATACCTTCTCAACGGTACTGGTTTCGGCAATGGAGTATTGGAGATACAATTAAGTTACGTGGAACGAGTAATCTCTATTTCTTCAGTCTCCCAACGAATCCTGTACGAAACTCAACCCATTCCCTTCAACAATGCACACTTCTATCTCTCGGTGCACCACCTTCAAGATCCGTTGTTCTACATTCGGCAATTTCTCTTCTCACTCAACATTCGCCGGGAAAACATAGCTCGGCAAATCGCTTCCTACGTCGCCCACATGTGCAACGGAAACACGGGGAGGAATTCGAATTTCTATGTCATCGCTAGAGTGGATTTGGTGAGAGCCATCCGAATTGAAGAAGAGTCGATGTGGAGAGATGGGGGTGGAGTGGTGGTGGAGGCCGAGACGGTGGTGTTCGATGAGGTTCCGCGGGCGAGGAGAGGAGTGGTGGTGGGGGAGAGGTTGAGGAAGTTGAAATCGGAGGAAGAAGAGGGAGATTGCAGTGTGTGTTTGGATGAATTGGATTGTGGAAAGAGGGAGGTGATAAGAATTCCTTGCGGCCATGTTTATCATGAATCATGCATCTTCGAGTGGCTTAACAACAACAATTCTTGCCCTTTGTGTAGAACCTCATTCCCACTAGACAACCCAAATACTTACTAA

mRNA sequence

ATGTCCTTTGCAATTTCTTCTCCAATTCAATACCTTCTCAACGGTACTGGTTTCGGCAATGGAGTATTGGAGATACAATTAAGTTACGTGGAACGAGTAATCTCTATTTCTTCAGTCTCCCAACGAATCCTGTACGAAACTCAACCCATTCCCTTCAACAATGCACACTTCTATCTCTCGGTGCACCACCTTCAAGATCCGTTGTTCTACATTCGGCAATTTCTCTTCTCACTCAACATTCGCCGGGAAAACATAGCTCGGCAAATCGCTTCCTACGTCGCCCACATGTGCAACGGAAACACGGGGAGGAATTCGAATTTCTATGTCATCGCTAGAGTGGATTTGGTGAGAGCCATCCGAATTGAAGAAGAGTCGATGTGGAGAGATGGGGGTGGAGTGGTGGTGGAGGCCGAGACGGTGGTGTTCGATGAGGTTCCGCGGGCGAGGAGAGGAGTGGTGGTGGGGGAGAGGTTGAGGAAGTTGAAATCGGAGGAAGAAGAGGGAGATTGCAGTGTGTGTTTGGATGAATTGGATTGTGGAAAGAGGGAGGTGATAAGAATTCCTTGCGGCCATGTTTATCATGAATCATGCATCTTCGAGTGGCTTAACAACAACAATTCTTGCCCTTTGTGTAGAACCTCATTCCCACTAGACAACCCAAATACTTACTAA

Coding sequence (CDS)

ATGTCCTTTGCAATTTCTTCTCCAATTCAATACCTTCTCAACGGTACTGGTTTCGGCAATGGAGTATTGGAGATACAATTAAGTTACGTGGAACGAGTAATCTCTATTTCTTCAGTCTCCCAACGAATCCTGTACGAAACTCAACCCATTCCCTTCAACAATGCACACTTCTATCTCTCGGTGCACCACCTTCAAGATCCGTTGTTCTACATTCGGCAATTTCTCTTCTCACTCAACATTCGCCGGGAAAACATAGCTCGGCAAATCGCTTCCTACGTCGCCCACATGTGCAACGGAAACACGGGGAGGAATTCGAATTTCTATGTCATCGCTAGAGTGGATTTGGTGAGAGCCATCCGAATTGAAGAAGAGTCGATGTGGAGAGATGGGGGTGGAGTGGTGGTGGAGGCCGAGACGGTGGTGTTCGATGAGGTTCCGCGGGCGAGGAGAGGAGTGGTGGTGGGGGAGAGGTTGAGGAAGTTGAAATCGGAGGAAGAAGAGGGAGATTGCAGTGTGTGTTTGGATGAATTGGATTGTGGAAAGAGGGAGGTGATAAGAATTCCTTGCGGCCATGTTTATCATGAATCATGCATCTTCGAGTGGCTTAACAACAACAATTCTTGCCCTTTGTGTAGAACCTCATTCCCACTAGACAACCCAAATACTTACTAA

Protein sequence

MSFAISSPIQYLLNGTGFGNGVLEIQLSYVERVISISSVSQRILYETQPIPFNNAHFYLSVHHLQDPLFYIRQFLFSLNIRRENIARQIASYVAHMCNGNTGRNSNFYVIARVDLVRAIRIEEESMWRDGGGVVVEAETVVFDEVPRARRGVVVGERLRKLKSEEEEGDCSVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPLDNPNTY*
Homology
[Close]
BLAST of MELO3C017919 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.9e-10
Identity = 28/61 (45.90%), Postives = 40/61 (65.57%), Query Frame = 1 

Query: 161 LKSEEEEGDCSVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPLDNP 220
           LKSE  +  C+VC+DE + G  +V ++PC HV+H+ C+  WL  +NSCP+CR   P D+P
Sbjct: 209 LKSEMNQ--CAVCMDEFEDGS-DVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDP 266

Query: 221 N 222
           +
Sbjct: 269 D 266

[Close]
BLAST of MELO3C017919 vs. Swiss-Prot
Match: RN181_XENTR (E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09
Identity = 35/79 (44.30%), Postives = 43/79 (54.43%), Query Frame = 1 

Query: 146 PRARRGVVVGERLRKLKSEEEEGD----CSVCLDELDCGKREVIRIPCGHVYHESCIFEW 205
           P A + VV  E L K+    E+ D    C VCL E + G+  V ++PC H++H SCI  W
Sbjct: 53  PPAAKKVV--ESLPKVTVTPEQADAALKCPVCLLEFEEGET-VRQLPCEHLFHSSCILPW 112

Query: 206 LNNNNSCPLCRTSFPLDNP 221
           L   NSCPLCR   P D+P
Sbjct: 113 LGKTNSCPLCRHELPTDSP 128

[Close]
BLAST of MELO3C017919 vs. Swiss-Prot
Match: RN181_DROME (E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster GN=CG7694 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09
Identity = 31/79 (39.24%), Postives = 43/79 (54.43%), Query Frame = 1 

Query: 144 EVPRARRGVVVGERLRKLKSEEEEGD--CSVCLDELDCGKREVIRIPCGHVYHESCIFEW 203
           EVP A +  ++   + ++   +E GD  CSVC +  + G++  I +PC H +HE CI  W
Sbjct: 42  EVPEASKRAILELPVHEIVKSDEGGDLECSVCKEPAEEGQKYRI-LPCKHEFHEECILLW 101

Query: 204 LNNNNSCPLCRTSFPLDNP 221
           L   NSCPLCR     D+P
Sbjct: 102 LKKTNSCPLCRYELETDDP 119

[Close]
BLAST of MELO3C017919 vs. Swiss-Prot
Match: RN181_XENLA (E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.9e-09
Identity = 34/80 (42.50%), Postives = 44/80 (55.00%), Query Frame = 1 

Query: 146 PRARRGVVVGERLRKLKSEEEEGD----CSVCLDELDCGKREVIRIPCGHVYHESCIFEW 205
           P A + VV  E L K+    E+ D    C VCL E + G+  V ++PC H++H +CI  W
Sbjct: 53  PPASKKVV--ESLPKVTVTPEQADAALKCPVCLLEFEEGET-VRQLPCEHLFHSACILPW 112

Query: 206 LNNNNSCPLCRTSFPLDNPN 222
           L   NSCPLCR   P D+P+
Sbjct: 113 LGKTNSCPLCRHELPTDSPD 129

[Close]
BLAST of MELO3C017919 vs. Swiss-Prot
Match: RN181_RAT (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.9e-09
Identity = 30/74 (40.54%), Postives = 40/74 (54.05%), Query Frame = 1 

Query: 146 PRARRGVVVGERLRKLKSEEEEGDCSVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNN 205
           P A + VV       ++S + E  C VCL E +  +  VI +PC H++H +CI  WL+  
Sbjct: 64  PPAAKAVVESLPRTVIRSSKAELKCPVCLLEFE-EEETVIEMPCHHLFHSNCILPWLSKT 123

Query: 206 NSCPLCRTSFPLDN 220
           NSCPLCR   P D+
Sbjct: 124 NSCPLCRHELPTDD 136

[Close]
BLAST of MELO3C017919 vs. TrEMBL
Match: A0A0A0KYC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G003650 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.1e-85
Identity = 167/221 (75.57%), Postives = 179/221 (81.00%), Query Frame = 1 

Query: 1   MSFAISSPIQYLLNGTGFGNGVLEIQLSYVERVISISSVSQRILYETQPIPFNNAHFYLS 60
           MSF ISSPI YLLN  GFGNGVLE+QLSY+ER IS+SS SQRILYETQP PFNNA FYLS
Sbjct: 1   MSFEISSPIPYLLNANGFGNGVLEVQLSYLERAISVSSFSQRILYETQPTPFNNALFYLS 60

Query: 61  VHHLQDPLFYIRQFLFSLNIRRENIARQIASYVAHMCNGNTGRNSNFYVIARVDLVRAIR 120
           VH LQ PLF+IRQFL+SLNIRRE IARQIAS+VAHMCNGNTG NSNFYVIARVDLVR IR
Sbjct: 61  VHQLQHPLFHIRQFLYSLNIRRETIARQIASFVAHMCNGNTGWNSNFYVIARVDLVRVIR 120

Query: 121 IEEESMWRDGGGVVVEAETVVFDEVPRAR--RGVVVGERLRKLKSEEEEGDCSVCLDELD 180
           IEE+                     PRA   RGV V ERL KLKSEEE+GDCSVCLDELD
Sbjct: 121 IEEQ---------------------PRAEGWRGVAV-ERLSKLKSEEEKGDCSVCLDELD 180

Query: 181 CGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPLDN 220
           C KREVIRIPCGHVYHESCIF+WLN++NSCPLCR+SFPL N
Sbjct: 181 CEKREVIRIPCGHVYHESCIFKWLNSSNSCPLCRSSFPLHN 199

[Close]
BLAST of MELO3C017919 vs. TrEMBL
Match: A0A0A0K2W2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025210 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.8e-55
Identity = 123/223 (55.16%), Postives = 161/223 (72.20%), Query Frame = 1 

Query: 1   MSFAISSPIQYLL--NGTGFGNGVLEIQLSYVERVISISSVSQR---ILYETQPIPFNNA 60
           MSFAIS+PIQY L  +GTG GNGVL++ +S+++++IS+S ++ R   +L++T  IP++NA
Sbjct: 1   MSFAISNPIQYRLYASGTG-GNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNA 60

Query: 61  HFYLSVHHLQDPLFYIRQFLFSLNIR---RENIARQIASYVAHMCNGNTGRNSNFYVIAR 120
            FYLS+  LQ PLFYI Q L SLNIR    +N+AR+IAS++  M + N+   +NF+++A 
Sbjct: 61  LFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNS--ETNFHILAE 120

Query: 121 VDLVRAIRIEEESMWRDGGGVVVEAETVVFDEVPRA-RRGVVV--GERLRKLKSEEEEGD 180
           VD +R I +        GGG     ETVV DE P A +RGV V  GERLR  +  EE GD
Sbjct: 121 VDFIRLIWLPSM-----GGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGD 180

Query: 181 CSVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCR 213
           CS+CLDEL C KREV+RIPCGHVYHESCIF+WL N+NSCPLCR
Sbjct: 181 CSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCR 215

[Close]
BLAST of MELO3C017919 vs. TrEMBL
Match: A0A0A0K696_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G026750 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.8e-55
Identity = 123/223 (55.16%), Postives = 161/223 (72.20%), Query Frame = 1 

Query: 1   MSFAISSPIQYLL--NGTGFGNGVLEIQLSYVERVISISSVSQR---ILYETQPIPFNNA 60
           MSFAIS+PIQY L  +GTG GNGVL++ +S+++++IS+S ++ R   +L++T  IP++NA
Sbjct: 1   MSFAISNPIQYRLYASGTG-GNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNA 60

Query: 61  HFYLSVHHLQDPLFYIRQFLFSLNIR---RENIARQIASYVAHMCNGNTGRNSNFYVIAR 120
            FYLS+  LQ PLFYI Q L SLNIR    +N+AR+IAS++  M + N+   +NF+++A 
Sbjct: 61  LFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNS--ETNFHILAE 120

Query: 121 VDLVRAIRIEEESMWRDGGGVVVEAETVVFDEVPRA-RRGVVV--GERLRKLKSEEEEGD 180
           VD +R I +        GGG     ETVV DE P A +RGV V  GERLR  +  EE GD
Sbjct: 121 VDFIRLIWLPSM-----GGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGD 180

Query: 181 CSVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCR 213
           CS+CLDEL C KREV+RIPCGHVYHESCIF+WL N+NSCPLCR
Sbjct: 181 CSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCR 215

[Close]
BLAST of MELO3C017919 vs. TrEMBL
Match: A0A0A0LHS2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G130680 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 7.9e-18
Identity = 75/231 (32.47%), Postives = 110/231 (47.62%), Query Frame = 1 

Query: 1   MSFAISSPIQYLLNGTGFGNGVLEIQLSYVERVISISS----VSQRILYETQPIPFNNAH 60
           MSF+ +S +Q   +G    +  L ++L +  R+IS S     V   IL +T       A 
Sbjct: 1   MSFSATSCVQCSFSGYPNTDQTLIVRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEAL 60

Query: 61  FYLSVHHLQDPL------FYIRQFLFSLNIRRENIARQIASYVAHMCNGNTGRNSNFYVI 120
           F LS  +LQ PL      + + +FL S N+R  ++ R ++  +          N  F + 
Sbjct: 61  FSLS--NLQYPLQQQELEYMVNEFLRSFNLR-SSVCRIVSHNILSFAQQFDINNECFKIE 120

Query: 121 ARVDLVRAIRIEEESMWRDGGGVVVEAETVVFDEVPRARRGVVVGERLRKLK-------S 180
             VD ++         W +    +    TV  + +P         ER++K K        
Sbjct: 121 TNVDYIK-------EYWTEAAPELYPISTVGEEGLPPRGASESAIERVKKQKFDGFRGEE 180

Query: 181 EEEEGDCSVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTS 215
           EEE GDCSVC +E+     EV RIPCGHVYH+SCI +WL  +NSCPLCR +
Sbjct: 181 EEEIGDCSVCCEEIKRKGGEVRRIPCGHVYHKSCILKWLEISNSCPLCRAA 221

[Close]
BLAST of MELO3C017919 vs. TrEMBL
Match: A0A0A0LRB0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G432790 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-17
Identity = 71/225 (31.56%), Postives = 115/225 (51.11%), Query Frame = 1 

Query: 2   SFAISSPIQYLLNGTGFGNG----VLEIQLSYVERVISISSVSQRILYETQPIPFNNAHF 61
           +F+    I+   NG+   NG     +E++L +  +++   S S +IL +T PI  ++   
Sbjct: 6   TFSFRCSIRCNANGSAATNGQPLQFVELRLGHFSQLVL--SPSHQILQQTSPILISDTLI 65

Query: 62  YLSVHHLQDPLFY----IRQFLFSLNIRR---ENIARQIASYVAHMCNGNTGRNSNFYVI 121
              +  L+DP F     + +FL S NI     + I  +I+S+   +  GN   NSNF++I
Sbjct: 66  RFPLRELEDPPFISHSSLCRFLSSYNISDAVCDAIFLKISSFAFQLVAGNL--NSNFHII 125

Query: 122 ARVDLVRAIRIEEESMWRDGGGVVVEAETVVFDEVPRARRGVVVGERLRKLKSEEEEGDC 181
           A +D V    ++ +           E    V    PR+    ++ E+      EE E +C
Sbjct: 126 AALDFVYTHWVDLDP---------AEDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDEC 185

Query: 182 SVCLDELDCG---KREVIRIPCGHVYHESCIFEWLNNNNSCPLCR 213
           SVC ++L      ++EV RIPCGH++H+SCI +WL  +NSCPLCR
Sbjct: 186 SVCYEDLHGKTEKEKEVSRIPCGHMFHKSCILKWLKISNSCPLCR 217

[Close]
BLAST of MELO3C017919 vs. TAIR10
Match: AT4G12190.1 (AT4G12190.1 RING/U-box superfamily protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-11
Identity = 30/65 (46.15%), Postives = 38/65 (58.46%), Query Frame = 1 

Query: 151 GVVVGERLRKLKSEEEEGDCSVCLDELDCGK--REVIRIPCGHVYHESCIFEWLNNNNSC 210
           G +  E L+ LK E E   CS+CL+ L  G   R++ R+ C HV+H  C+ EWL   N+C
Sbjct: 5   GRIKTEELKSLKMETEP--CSICLESLVSGPKPRDITRMTCSHVFHNGCLLEWLKRKNTC 64

Query: 211 PLCRT 214
           PLCRT
Sbjct: 65  PLCRT 67

[Close]
BLAST of MELO3C017919 vs. TAIR10
Match: AT5G37200.1 (AT5G37200.1 RING/U-box superfamily protein)

HSP 1 Score: 66.6 bits (161), Expect = 2.2e-11
Identity = 26/62 (41.94%), Postives = 39/62 (62.90%), Query Frame = 1 

Query: 152 VVVGERLRKLKSEEEEGDCSVCLDELDCGKREVIRIP-CGHVYHESCIFEWLNNNNSCPL 211
           +V  +R+     EEE+  CS+C+++      ++IR+P C H++H+ C+FEWL   NSCPL
Sbjct: 141 LVEEQRVESADLEEEDETCSICIEKFSESHEDIIRVPDCLHLFHQGCLFEWLGLQNSCPL 200

Query: 212 CR 213
           CR
Sbjct: 201 CR 202

[Close]
BLAST of MELO3C017919 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 66.6 bits (161), Expect = 2.2e-11
Identity = 28/61 (45.90%), Postives = 40/61 (65.57%), Query Frame = 1 

Query: 161 LKSEEEEGDCSVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPLDNP 220
           LKSE  +  C+VC+DE + G  +V ++PC HV+H+ C+  WL  +NSCP+CR   P D+P
Sbjct: 209 LKSEMNQ--CAVCMDEFEDGS-DVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDP 266

Query: 221 N 222
           +
Sbjct: 269 D 266

[Close]
BLAST of MELO3C017919 vs. TAIR10
Match: AT4G05350.1 (AT4G05350.1 RING/U-box superfamily protein)

HSP 1 Score: 65.9 bits (159), Expect = 3.7e-11
Identity = 30/65 (46.15%), Postives = 37/65 (56.92%), Query Frame = 1 

Query: 151 GVVVGERLRKLKSEEEEGDCSVCLDELDCGK--REVIRIPCGHVYHESCIFEWLNNNNSC 210
           G +  E  + LK E E   CS+CL+ L  G   R+V R+ C HV+H  C+ EWL   N+C
Sbjct: 140 GRMKAEEFKSLKMETEP--CSICLESLVSGPKPRDVTRMTCSHVFHNGCLLEWLKRKNTC 199

Query: 211 PLCRT 214
           PLCRT
Sbjct: 200 PLCRT 202

[Close]
BLAST of MELO3C017919 vs. TAIR10
Match: AT4G12210.1 (AT4G12210.1 RING/U-box superfamily protein)

HSP 1 Score: 63.5 bits (153), Expect = 1.9e-10
Identity = 28/65 (43.08%), Postives = 39/65 (60.00%), Query Frame = 1 

Query: 151 GVVVGERLRKLKSEEEEGDCSVCLDELDCGKR--EVIRIPCGHVYHESCIFEWLNNNNSC 210
           G +  E L+ LK E E   CS+CL+ L  G +  ++ R+ C HV+H  C+ EW    N+C
Sbjct: 136 GRIKAEELKSLKMETES--CSICLENLVSGPKPSDLTRMTCSHVFHNPCLLEWFMRKNTC 195

Query: 211 PLCRT 214
           PLCRT
Sbjct: 196 PLCRT 198

[Close]
BLAST of MELO3C017919 vs. NCBI nr
Match: gi|778697402|ref|XP_011654314.1| (PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Cucumis sativus])

HSP 1 Score: 324.3 bits (830), Expect = 1.6e-85
Identity = 167/221 (75.57%), Postives = 179/221 (81.00%), Query Frame = 1 

Query: 1   MSFAISSPIQYLLNGTGFGNGVLEIQLSYVERVISISSVSQRILYETQPIPFNNAHFYLS 60
           MSF ISSPI YLLN  GFGNGVLE+QLSY+ER IS+SS SQRILYETQP PFNNA FYLS
Sbjct: 1   MSFEISSPIPYLLNANGFGNGVLEVQLSYLERAISVSSFSQRILYETQPTPFNNALFYLS 60

Query: 61  VHHLQDPLFYIRQFLFSLNIRRENIARQIASYVAHMCNGNTGRNSNFYVIARVDLVRAIR 120
           VH LQ PLF+IRQFL+SLNIRRE IARQIAS+VAHMCNGNTG NSNFYVIARVDLVR IR
Sbjct: 61  VHQLQHPLFHIRQFLYSLNIRRETIARQIASFVAHMCNGNTGWNSNFYVIARVDLVRVIR 120

Query: 121 IEEESMWRDGGGVVVEAETVVFDEVPRAR--RGVVVGERLRKLKSEEEEGDCSVCLDELD 180
           IEE+                     PRA   RGV V ERL KLKSEEE+GDCSVCLDELD
Sbjct: 121 IEEQ---------------------PRAEGWRGVAV-ERLSKLKSEEEKGDCSVCLDELD 180

Query: 181 CGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCRTSFPLDN 220
           C KREVIRIPCGHVYHESCIF+WLN++NSCPLCR+SFPL N
Sbjct: 181 CEKREVIRIPCGHVYHESCIFKWLNSSNSCPLCRSSFPLHN 199

[Close]
BLAST of MELO3C017919 vs. NCBI nr
Match: gi|659108614|ref|XP_008454295.1| (PREDICTED: uncharacterized protein LOC103494735 isoform X1 [Cucumis melo])

HSP 1 Score: 305.1 bits (780), Expect = 1.0e-79
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1 

Query: 1   MSFAISSPIQYLLNGTGFGNGVLEIQLSYVERVISISSVSQRILYETQPIPFNNAHFYLS 60
           MSFAISSPIQYLLNGTGFGNGVLEIQLSYVERVISISSVSQRILYETQPIPFNNAHFYLS
Sbjct: 1   MSFAISSPIQYLLNGTGFGNGVLEIQLSYVERVISISSVSQRILYETQPIPFNNAHFYLS 60

Query: 61  VHHLQDPLFYIRQFLFSLNIRRENIARQIASYVAHMCNGNTGRNSNFYVIARVDLVRAIR 120
           VHHLQDPLFYIRQFLFSLNIRRENIARQIASYVAHMCNGNTGRNSNFYVIARVDLVRAIR
Sbjct: 61  VHHLQDPLFYIRQFLFSLNIRRENIARQIASYVAHMCNGNTGRNSNFYVIARVDLVRAIR 120

Query: 121 IEEESMWRDGGGVVVEAETVVFDEVPRARRGVV 154
           IEEESMWRDGGGVVVEAETVVFDEVPRARRGVV
Sbjct: 121 IEEESMWRDGGGVVVEAETVVFDEVPRARRGVV 153

[Close]
BLAST of MELO3C017919 vs. NCBI nr
Match: gi|449454422|ref|XP_004144954.1| (PREDICTED: uncharacterized protein LOC101214496 [Cucumis sativus])

HSP 1 Score: 223.4 bits (568), Expect = 4.0e-55
Identity = 123/223 (55.16%), Postives = 161/223 (72.20%), Query Frame = 1 

Query: 1   MSFAISSPIQYLL--NGTGFGNGVLEIQLSYVERVISISSVSQR---ILYETQPIPFNNA 60
           MSFAIS+PIQY L  +GTG GNGVL++ +S+++++IS+S ++ R   +L++T  IP++NA
Sbjct: 1   MSFAISNPIQYRLYASGTG-GNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNA 60

Query: 61  HFYLSVHHLQDPLFYIRQFLFSLNIR---RENIARQIASYVAHMCNGNTGRNSNFYVIAR 120
            FYLS+  LQ PLFYI Q L SLNIR    +N+AR+IAS++  M + N+   +NF+++A 
Sbjct: 61  LFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNS--ETNFHILAE 120

Query: 121 VDLVRAIRIEEESMWRDGGGVVVEAETVVFDEVPRA-RRGVVV--GERLRKLKSEEEEGD 180
           VD +R I +        GGG     ETVV DE P A +RGV V  GERLR  +  EE GD
Sbjct: 121 VDFIRLIWLPSM-----GGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGD 180

Query: 181 CSVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCR 213
           CS+CLDEL C KREV+RIPCGHVYHESCIF+WL N+NSCPLCR
Sbjct: 181 CSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCR 215

[Close]
BLAST of MELO3C017919 vs. NCBI nr
Match: gi|778730084|ref|XP_011659694.1| (PREDICTED: uncharacterized protein LOC105436225 [Cucumis sativus])

HSP 1 Score: 223.4 bits (568), Expect = 4.0e-55
Identity = 123/223 (55.16%), Postives = 161/223 (72.20%), Query Frame = 1 

Query: 1   MSFAISSPIQYLL--NGTGFGNGVLEIQLSYVERVISISSVSQR---ILYETQPIPFNNA 60
           MSFAIS+PIQY L  +GTG GNGVL++ +S+++++IS+S ++ R   +L++T  IP++NA
Sbjct: 1   MSFAISNPIQYRLYASGTG-GNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNA 60

Query: 61  HFYLSVHHLQDPLFYIRQFLFSLNIR---RENIARQIASYVAHMCNGNTGRNSNFYVIAR 120
            FYLS+  LQ PLFYI Q L SLNIR    +N+AR+IAS++  M + N+   +NF+++A 
Sbjct: 61  LFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNS--ETNFHILAE 120

Query: 121 VDLVRAIRIEEESMWRDGGGVVVEAETVVFDEVPRA-RRGVVV--GERLRKLKSEEEEGD 180
           VD +R I +        GGG     ETVV DE P A +RGV V  GERLR  +  EE GD
Sbjct: 121 VDFIRLIWLPSM-----GGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGD 180

Query: 181 CSVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCR 213
           CS+CLDEL C KREV+RIPCGHVYHESCIF+WL N+NSCPLCR
Sbjct: 181 CSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCR 215

[Close]
BLAST of MELO3C017919 vs. NCBI nr
Match: gi|659132530|ref|XP_008466247.1| (PREDICTED: uncharacterized protein LOC103503717 [Cucumis melo])

HSP 1 Score: 103.2 bits (256), Expect = 6.0e-19
Identity = 72/209 (34.45%), Postives = 108/209 (51.67%), Query Frame = 1 

Query: 22  VLEIQLSYVERVISISSVSQRILYETQPIPFNNA--HFYLSVHHLQDPLFYIRQFLFSLN 81
           ++EI+L    +++S SS   +I+ +T P P ++A  HF L    L++P F+    L    
Sbjct: 25  LVEIRLRRYSKLVSPSS--NQIIQQTFPTPISDALFHFPLPELELENPPFFFHDLLLQFL 84

Query: 82  IRRENIA--RQIASYVAHMCNGNTGRNSNFYVIARVDLVRAIRIEEESMWRDGGGVVVEA 141
              ++ A    I+S+   +  GN   N NF++IA VDL+  I ++            ++ 
Sbjct: 85  SPADSTAIFHNISSFALQLAAGNL--NLNFHLIATVDLLYTISVD------------LDL 144

Query: 142 ETVVFDEVPRARRGVVVGERLRKLKSE-----EEEGD-CSVCLDELDCG-----KREVIR 201
           +   +  + R      V ERL   K +     EE GD C VC ++L+C      + EV R
Sbjct: 145 DPPQYSPLVRNGAPASVIERLMDEKYDDGNGREEMGDQCCVCYEDLNCEREEEKEEEVTR 204

Query: 202 IPCGHVYHESCIFEWLNNNNSCPLCRTSF 216
           IPCGHVYH+ CI +WLN NNSCPLCR  F
Sbjct: 205 IPCGHVYHKYCILKWLNINNSCPLCRREF 217

The following BLAST results are available for this feature:
BLAST of MELO3C017919 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RNG1L_ARATH3.9e-1045.90E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1... [more]
RN181_XENTR1.1e-0944.30E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1[more]
RN181_DROME1.1e-0939.24E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster GN=CG7694 ... [more]
RN181_XENLA1.9e-0942.50E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2 SV=1[more]
RN181_RAT1.9e-0940.54E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1[more]
BLAST of MELO3C017919 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYC0_CUCSA1.1e-8575.57Uncharacterized protein OS=Cucumis sativus GN=Csa_4G003650 PE=4 SV=1[more]
A0A0A0K2W2_CUCSA2.8e-5555.16Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025210 PE=4 SV=1[more]
A0A0A0K696_CUCSA2.8e-5555.16Uncharacterized protein OS=Cucumis sativus GN=Csa_7G026750 PE=4 SV=1[more]
A0A0A0LHS2_CUCSA7.9e-1832.47Uncharacterized protein OS=Cucumis sativus GN=Csa_2G130680 PE=4 SV=1[more]
A0A0A0LRB0_CUCSA1.3e-1731.56Uncharacterized protein OS=Cucumis sativus GN=Csa_2G432790 PE=4 SV=1[more]
BLAST of MELO3C017919 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G12190.11.7e-1146.15 RING/U-box superfamily protein[more]
AT5G37200.12.2e-1141.94 RING/U-box superfamily protein[more]
AT3G19950.12.2e-1145.90 RING/U-box superfamily protein[more]
AT4G05350.13.7e-1146.15 RING/U-box superfamily protein[more]
AT4G12210.11.9e-1043.08 RING/U-box superfamily protein[more]
BLAST of MELO3C017919 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778697402|ref|XP_011654314.1|1.6e-8575.57PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Cucumis sativus][more]
gi|659108614|ref|XP_008454295.1|1.0e-79100.00PREDICTED: uncharacterized protein LOC103494735 isoform X1 [Cucumis melo][more]
gi|449454422|ref|XP_004144954.1|4.0e-5555.16PREDICTED: uncharacterized protein LOC101214496 [Cucumis sativus][more]
gi|778730084|ref|XP_011659694.1|4.0e-5555.16PREDICTED: uncharacterized protein LOC105436225 [Cucumis sativus][more]
gi|659132530|ref|XP_008466247.1|6.0e-1934.45PREDICTED: uncharacterized protein LOC103503717 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C017919T1MELO3C017919T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 169..212
score: 1.8
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 170..211
score: 5.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 170..212
score: 13
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 164..213
score: 3.3
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 50..220
score: 1.1
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 164..218
score: 2.55

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C017919Csa4G003650Cucumber (Chinese Long) v2cumeB312
MELO3C017919CSPI04G01210Wild cucumber (PI 183967)cpimeB310
MELO3C017919CsGy4G001100Cucumber (Gy14) v2cgybmeB269
MELO3C017919CsaV3_4G001200Cucumber (Chinese Long) v3cucmeB315
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C017919Cucumber (Chinese Long) v3cucmeB584
MELO3C017919Watermelon (97103) v2mewmbB463
MELO3C017919Watermelon (97103) v2mewmbB509
MELO3C017919Wax gourdmewgoB601
MELO3C017919Wax gourdmewgoB564
MELO3C017919Melon (DHL92) v3.5.1memeB096
MELO3C017919Cucumber (Gy14) v1cgymeB111
MELO3C017919Cucumber (Gy14) v1cgymeB372
MELO3C017919Cucurbita maxima (Rimu)cmameB245
MELO3C017919Cucurbita maxima (Rimu)cmameB347
MELO3C017919Cucurbita maxima (Rimu)cmameB434
MELO3C017919Cucurbita maxima (Rimu)cmameB854
MELO3C017919Cucurbita moschata (Rifu)cmomeB233
MELO3C017919Cucurbita moschata (Rifu)cmomeB339
MELO3C017919Cucurbita moschata (Rifu)cmomeB425
MELO3C017919Cucurbita moschata (Rifu)cmomeB836
MELO3C017919Wild cucumber (PI 183967)cpimeB572
MELO3C017919Cucumber (Chinese Long) v2cumeB561
MELO3C017919Watermelon (Charleston Gray)mewcgB446
MELO3C017919Watermelon (Charleston Gray)mewcgB453
MELO3C017919Watermelon (97103) v1mewmB490
MELO3C017919Watermelon (97103) v1mewmB497
MELO3C017919Cucurbita pepo (Zucchini)cpemeB540
MELO3C017919Cucurbita pepo (Zucchini)cpemeB146
MELO3C017919Cucurbita pepo (Zucchini)cpemeB318
MELO3C017919Cucurbita pepo (Zucchini)cpemeB589
MELO3C017919Bottle gourd (USVL1VR-Ls)lsimeB226
MELO3C017919Bottle gourd (USVL1VR-Ls)lsimeB269
MELO3C017919Cucumber (Gy14) v2cgybmeB501
MELO3C017919Silver-seed gourdcarmeB0116
MELO3C017919Silver-seed gourdcarmeB0758
MELO3C017919Silver-seed gourdcarmeB0813