MELO3C016688.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C016688.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Description60S ribosomal protein L18a-like protein
Locationchr07 : 2849033 .. 2853147 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCCCTCATGTTCTCAATTTGATCCATTTCGGCCGACGGTTTCGTTTCTAGAGAGAGAGAATGAGCCAAGAAGACAAATCCGCCGCTGTGGGTGTCGTCGTCCACCACCATCACGAATCCAATTCCGCCCATCCTCACTACGGAACCTTCCAAGGCGTCGCTAATTATCCTCCCGTCGAATTCCCTCAGCCTACTCGCCCGCCTGGTCTCTCTGACTCCGACGATCCTTCTCAATATCAGCACTATGCTCACGGCTATCAAGCTGTACCCGGTAACCTCTTCTTTCTCAATCTTTTCTCACTTGTTAATCTGGTGTCAGATTTTTCTTTTGCTTCTTGTACGATGTCTTCGATCTCATGCCTTTCCGTTGACTTGAACTACTGATCTTTGTTGCTATGTCAAATGTCTTTAGTTGTACTCCAGTAAAAGGTTGTTCTAATCACTTGAATAACCTAGTTCCGTCCGAATCTTGAAATTATCATCTACTGAAGTGCCAAACATGGATTAATAATCTTTTAGTCGTCATATATTTTGTTATCTGTAATTTCATTTGGAATTTAACCTTCAGCTTTCTAGTTCCTGCTAGTACTAGGTTTTTGTTGAGCTTGAGATTAGATCCTGCCTTTTCTTGTTCTGAAAGTGTGCTTTTATATTGGGGTCTGCTTGGAAGTTTATAATTCAAAATTGAAAGAAAGAAAAAAATAGAATAGAGTAGGAAGCCACTTCTAACTTATGATCATACTTAACAACGCTCACAATGAAGTATTGTAGTTTATCAGTGTTATTTACTTTGAAGCTTTTTGTTATGGCAAACATTCGACAAAAACTTTGGTAGGATTCTTATTATATGTTTAGGAGTGATTTTGGAACAGTGAAAAATAACTTTTGTCATGTTCAAGATCACTCTAAAACACGCTTTTAATTGTAATAATATGAAATCTTCGTTTAAAAGGTGTAAAATGAAATATTGAATTGATTTTTGAGTTATTAAAAGTGTATTCCAAAGTGATTTTAGGCATGATGAAAGTGATTTTAACCATTTCAAAATCACTACCAAACATGTACATAACAAAAGTTGATTCTCTTTTGACTCTTGAAATTCTTGATTTTAGCATTCTGAAATGCGTATGCTCTCTTTCCCTTTTGCATTTCGAGACGAATATGGGTGAAAATAAATGCCATGGTTTTATATATTCATATTCAACCCTTTTTCTCTCTGAGATTTGTTGTTGCACTATAAAATTTTCTTTAGTTTCTTTTTGTTGGCTGTAACTTTGTGTAACTTCTTCTAAAATAGACTCTCGGATTTGCTTAACATATATCAGTACAAAGACAAAAGTTGTAACTCAAAATTTTCTTTTATTTATCTATTTATGAATTCTTCCAGGATATGCTATTGTTGAAGGAAGACCAGTGAGAGAGCCGCCCCTTCCTTGCTGTGGCATTGGCATTGGGTGGTTCCTGTAAGTAGCCATAATTGTTGGACTTTATCATCATTTACATTACACTAGCATTGCCATCATAAACAAGCCAGGTGATATCATTATTGCCACAATAAGTGGGCGTTTAGAGGGGCTGAGTTGGTTGTAATAATTAGTGGTCGTTATAGCCTGTGAGTTATAATACTTTGTAGTTTATAATATTCTATGTTTGGAGTATAGGTTACTTTAGTTTGAGTGTGAAATAGTAAACATTGTAACAAAGAGAGAAAAAGAAGATGAATAAGAAATAACATGCACTATATTGAAGAGGGATTTAAAATGGTAATATGTAGTTAATTATATGTTATAATAGTTGAAAATACTAATTATTATAATTGGAGTCCCAAACACAAAGTGTGCTATCATAGTCCACTCCACGCACTTGAAGTTTGTAGGTCAAACACCTCTAGGCATTTTAAAGTGTCAGTGGTTATTTGGTCAGAAAGTTATCAATCCGTAAGATGATGCGAATGCTACATGATATGAAAACCTTAGGATTTGAAAATTAGAAATCCAGTTGGTGAACCCCTAGCATCAAATTCTAAAACTTCCAATTTAATTTGACAACAATCCAAGGGAATGGATTCTATTTGGATCACTCTTTGATCAAAGACCGAGAGATAAGGAGAACTAATTCCTCACTCCAAGTTCGGAAACTTTACAAGCAAGGTGATCAAACTTACCTGAATGTTTTTGGCATGCAACATTGAGTCAAAAATTGCAAAAGAATGACGATGAGACTCTGTCATCTATCAGAGAATTTTTATTGAAAGAAAACCCCAGATCTTCAAAATATAACAAACTAATGTTTCCAATACTTTATACCCAAACTATTGTACTAAAAAAGACAAAAAAAGTCTATTTTACCACTAACTCAAAGGAGCTAAAACTCAAATAAATATGTATGGGTCTAAAAATAAAAGCCCACAAATAAGGTATGTTTTTACAAAATAAAACAAATTACAAAACTAAATTGGTTTGATCCCATAGCCTCAGCTGACTCCAATTATAAATCCTCTAATCAATTGTTGCTGCTTGAATCTCCTTAATTGAGTTTACCTCCTCATGAATGTGAGAATTCAATGCTAACACGTGATTCATCTAGGAGGTAACGCAAGGGAGTCTTGATTCATATCACTACAACTTCCATCTTATGAACTAAAATCAATCAGCTTCTAGATTGGAATGATAGAATTGCTAGTGTGTCATGCATTCTTTTCTTTATCTTGCTATTTAAAAATTTCCCAGATTTTTGTGTCTACATATGAGTGGCCTGATAAAAAAGAATACTGTGTTTTTCAGGTTTATTATTGGTTTCTTCCTTGCTGCTATCCCATGGTATGCTGGAGCAATTCTTATACTATGTGGCAGGGTTGACTACCGTGAGAAACCAGGATATGTTGCCTGCTCAATTGCTGTGAGTAACTTTTCATTATTATTTTAGACTTCTTCAGCTTCATGACGATGTTCTTATATCTCCAATATAGTTCTGCAATAGGTTTAATCACGAGAACTGATTTTTCTGTTATATTTCTTTGCAACTTGCCAAAAGATATATTGGATTAGTTGGTTAAAGCAGGAAAAGGCATTCGGGAGTCGATGGTTGTAATTTGTCAAAAACTAGACCTTTTAGTATCTTGAGCAACGTTTGACAGTAAACAAACTTGATTTGTTACTTGCTTCTTTCTATAAAGATTATTACTTGTTGGAAAGCTTTAACTAAAAAAAATTGTTATAAAATGAGTTAGTATATAAGTCATAAGTCATCCGGAATAAGTTCATTTATTCTCTTTCCTTTTATTTTCTATTAGAACTGTTTATTTTCTTAAACACTAAATGCCAGAAAATGCTCCACGTAGGGGTTAGACGGGGACGCGGCCCCCTCAATTTTATTAGTAAACGCAATAGTATTTAATATATCTTTACTCATTAACCAAGTTAGCCCGGTACCTCGTTGTTTTTGGCTGACACTATTGCAATTTAGATTTCTGCGTTTGATGTTTTTATTATGAAAAAAAATGCTCGGCTATTTGTAAATGTGTATGCATATGAATTTGTGCCCCTGACATAAATGTCTTGATCCACCACCGTTGCAAGCTAATATTATTATGTTGCATGTCAGGCTGTTATTGCCACACTTGCAATTATATTCGGTGCAACAAGGGAAGCTGATGTCTGGTAACCAATCCTAAACTTAAAGTATTGTACAGTTTGCAAATATGTATGAACTGACAGAGCCCATGGGCAAGCTTAGTTCCATTGAAACCTGAATCTGTGAGAGCCTATCACTACAAGAAATTACACTTTTCCCAATGGATAAACTCATTGGGAAAACTCCGAAAAGCTTCTGGAAAATTTCTCCCGACGCCACATTGGCCATTGTCATGATCGTCAGGAAAGATTTCCTCGGGAGAAGCTTAATTTCTTGTGGTGTATAGATATTGGTTAGTGGTTGTTTCCATGTTGTGCCCCTAAGAAGCTGTGCCTGCAAAATCATGTTATTTGTTTTAAATCTACGATATGTGTTATGATGACTATTCATCTTAAACTCATGTGTAGAAACCTACTTATCCTTTGGTAAATATATTTCTTTCTGCTTGTTTGGAATAAGCATTTGAACATCAAAACAGAAAA

mRNA sequence

ATCCCTCATGTTCTCAATTTGATCCATTTCGGCCGACGGTTTCGTTTCTAGAGAGAGAGAATGAGCCAAGAAGACAAATCCGCCGCTGTGGGTGTCGTCGTCCACCACCATCACGAATCCAATTCCGCCCATCCTCACTACGGAACCTTCCAAGGCGTCGCTAATTATCCTCCCGTCGAATTCCCTCAGCCTACTCGCCCGCCTGGTCTCTCTGACTCCGACGATCCTTCTCAATATCAGCACTATGCTCACGGCTATCAAGCTGTACCCGGATATGCTATTGTTGAAGGAAGACCAGTGAGAGAGCCGCCCCTTCCTTGCTGTGGCATTGGCATTGGGTGGTTCCTGTTTATTATTGGTTTCTTCCTTGCTGCTATCCCATGGTATGCTGGAGCAATTCTTATACTATGTGGCAGGGTTGACTACCGTGAGAAACCAGGATATGTTGCCTGCTCAATTGCTGCTGTTATTGCCACACTTGCAATTATATTCGGTGCAACAAGGGAAGCTGATGTCTGGTAACCAATCCTAAACTTAAAGTATTGTACAGTTTGCAAATATGTATGAACTGACAGAGCCCATGGGCAAGCTTAGTTCCATTGAAACCTGAATCTGTGAGAGCCTATCACTACAAGAAATTACACTTTTCCCAATGGATAAACTCATTGGGAAAACTCCGAAAAGCTTCTGGAAAATTTCTCCCGACGCCACATTGGCCATTGTCATGATCGTCAGGAAAGATTTCCTCGGGAGAAGCTTAATTTCTTGTGGTGTATAGATATTGGTTAGTGGTTGTTTCCATGTTGTGCCCCTAAGAAGCTGTGCCTGCAAAATCATGTTATTTGTTTTAAATCTACGATATGTGTTATGATGACTATTCATCTTAAACTCATGTGTAGAAACCTACTTATCCTTTGGTAAATATATTTCTTTCTGCTTGTTTGGAATAAGCATTTGAACATCAAAACAGAAAA

Coding sequence (CDS)

ATGAGCCAAGAAGACAAATCCGCCGCTGTGGGTGTCGTCGTCCACCACCATCACGAATCCAATTCCGCCCATCCTCACTACGGAACCTTCCAAGGCGTCGCTAATTATCCTCCCGTCGAATTCCCTCAGCCTACTCGCCCGCCTGGTCTCTCTGACTCCGACGATCCTTCTCAATATCAGCACTATGCTCACGGCTATCAAGCTGTACCCGGATATGCTATTGTTGAAGGAAGACCAGTGAGAGAGCCGCCCCTTCCTTGCTGTGGCATTGGCATTGGGTGGTTCCTGTTTATTATTGGTTTCTTCCTTGCTGCTATCCCATGGTATGCTGGAGCAATTCTTATACTATGTGGCAGGGTTGACTACCGTGAGAAACCAGGATATGTTGCCTGCTCAATTGCTGCTGTTATTGCCACACTTGCAATTATATTCGGTGCAACAAGGGAAGCTGATGTCTGGTAA

Protein sequence

MSQEDKSAAVGVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGATREADVW
Homology
[Close]
BLAST of MELO3C016688.2 vs. NCBI nr
Match: XP_008452440.1 (PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis melo])

HSP 1 Score: 293.1 bits (749), Expect = 5.4e-76
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0 

Query: 1   MSQEDKSAXXXXXXXXXXXXXSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQ 60
           MSQEDKSAXXXXXXXXXXXXXSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQ
Sbjct: 1   MSQEDKSAXXXXXXXXXXXXXSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQ 60

Query: 61  HYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRV 120
           HYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRV
Sbjct: 61  HYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRV 120

Query: 121 DYREKPGYVACSIAAVIATLAIIFGATREADVW 154
           DYREKPGYVACSIAAVIATLAIIFGATREADVW
Sbjct: 121 DYREKPGYVACSIAAVIATLAIIFGATREADVW 153

[Close]
BLAST of MELO3C016688.2 vs. NCBI nr
Match: XP_004146004.1 (PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis sativus] >KGN55009.1 hypothetical protein Csa_4G621210 [Cucumis sativus])

HSP 1 Score: 266.9 bits (681), Expect = 4.1e-68
Identity = 138/153 (90.20%), Postives = 143/153 (93.46%), Query Frame = 0 

Query: 1   MSQEDKSAXXXXXXXXXXXXXSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQ 60
           MS++DKSA  XXXXXXXXXXX  HPHYGTFQGVANYPPV F  PTR PG+ DSDDPSQYQ
Sbjct: 1   MSEQDKSAAVXXXXXXXXXXXXPHPHYGTFQGVANYPPVGFSHPTRLPGVPDSDDPSQYQ 60

Query: 61  HYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRV 120
           HYAHGYQAVPGYAIVEGRPVREP LPCCGIGIGWFLFIIGFFLAAIPWYAGAILI+CGRV
Sbjct: 61  HYAHGYQAVPGYAIVEGRPVREPRLPCCGIGIGWFLFIIGFFLAAIPWYAGAILIICGRV 120

Query: 121 DYREKPGYVACSIAAVIATLAIIFGATREADVW 154
           DYREKPGYVACSIAAVIAT+AIIFGATREADVW
Sbjct: 121 DYREKPGYVACSIAAVIATVAIIFGATREADVW 153

[Close]
BLAST of MELO3C016688.2 vs. NCBI nr
Match: XP_022936871.1 (60S ribosomal protein L18a-like protein [Cucurbita moschata])

HSP 1 Score: 241.5 bits (615), Expect = 1.9e-60
Identity = 124/153 (81.05%), Postives = 129/153 (84.31%), Query Frame = 0 

Query: 1   MSQEDKSAXXXXXXXXXXXXXSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQ 60
           MSQEDKSA    XXXXXX     HPHYGTFQGVANYPPV FPQPTRPPG+SD DD SQ +
Sbjct: 1   MSQEDKSAAVGVXXXXXXEPNPGHPHYGTFQGVANYPPVGFPQPTRPPGVSDFDDRSQPE 60

Query: 61  HYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRV 120
           HYAHGYQ V GYA+VEGRPVREP LPCCGIG GWFLFIIGF L A  WY GAILILCGRV
Sbjct: 61  HYAHGYQTVTGYAVVEGRPVREPRLPCCGIGYGWFLFIIGFILPA-TWYIGAILILCGRV 120

Query: 121 DYREKPGYVACSIAAVIATLAIIFGATREADVW 154
            YREKPGYVACSIAAVIAT+AIIFGAT+ ADVW
Sbjct: 121 HYREKPGYVACSIAAVIATVAIIFGATKGADVW 152

[Close]
BLAST of MELO3C016688.2 vs. NCBI nr
Match: XP_022976878.1 (60S ribosomal protein L18a-like protein [Cucurbita maxima])

HSP 1 Score: 240.4 bits (612), Expect = 4.2e-60
Identity = 125/153 (81.70%), Postives = 129/153 (84.31%), Query Frame = 0 

Query: 1   MSQEDKSAXXXXXXXXXXXXXSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQ 60
           MSQEDKSA    XXXXXX     HPHYGTFQGVANYPPV FPQPTRPPG+SD DD SQ Q
Sbjct: 1   MSQEDKSAAVGVXXXXXXEPNPGHPHYGTFQGVANYPPVGFPQPTRPPGVSDFDDRSQPQ 60

Query: 61  HYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRV 120
           +YAHGYQ V GYAIVEGRPVREP LPCCGIG GWFLFIIGF L A  WY GAILILCGRV
Sbjct: 61  NYAHGYQTVTGYAIVEGRPVREPRLPCCGIGYGWFLFIIGFILPA-TWYIGAILILCGRV 120

Query: 121 DYREKPGYVACSIAAVIATLAIIFGATREADVW 154
            YREKPGYVACSIAAVIAT+AIIFGAT+ ADVW
Sbjct: 121 HYREKPGYVACSIAAVIATVAIIFGATKGADVW 152

[Close]
BLAST of MELO3C016688.2 vs. NCBI nr
Match: XP_023536200.1 (60S ribosomal protein L18a-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.0 bits (611), Expect = 5.4e-60
Identity = 125/153 (81.70%), Postives = 128/153 (83.66%), Query Frame = 0 

Query: 1   MSQEDKSAXXXXXXXXXXXXXSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQ 60
           MSQEDKSA    XXXXXX     HPHYGTFQGVANYPPV FPQPTRPPG+SD DD SQ Q
Sbjct: 1   MSQEDKSAAVGVXXXXXXEPNPGHPHYGTFQGVANYPPVGFPQPTRPPGVSDFDDRSQPQ 60

Query: 61  HYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRV 120
            YAHGYQ V GYAIVEGRPVREP LPCCGIG GWFLFIIGF L A  WY GAILILCGRV
Sbjct: 61  QYAHGYQTVTGYAIVEGRPVREPRLPCCGIGYGWFLFIIGFILPA-TWYIGAILILCGRV 120

Query: 121 DYREKPGYVACSIAAVIATLAIIFGATREADVW 154
            YREKPGYVACSIAAVIAT+AIIFGAT+ ADVW
Sbjct: 121 HYREKPGYVACSIAAVIATVAIIFGATKGADVW 152

[Close]
BLAST of MELO3C016688.2 vs. TAIR10
Match: AT1G17080.1 (Ribosomal protein L18ae family)

HSP 1 Score: 174.1 bits (440), Expect = 6.6e-44
Identity = 82/139 (58.99%), Postives = 104/139 (74.82%), Query Frame = 0 

Query: 24  HPHYGTFQGVANYPPVE-------FPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGY-AIV 83
           H  YGTFQGV+NYPP +       FPQP+ PPG+ DS  P    +YAHGYQ VP +  + 
Sbjct: 20  HHQYGTFQGVSNYPPPQNSAPVTGFPQPSAPPGVYDSGAP----YYAHGYQTVPVHGGVA 79

Query: 84  EGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCG-RVDYREKPGYVACSIA 143
           EGRPVR+  LPCCGIG+GWFLFI+GFFL AIPWY G  +++ G R+DYREKPGY+AC+IA
Sbjct: 80  EGRPVRQRRLPCCGIGLGWFLFIVGFFLGAIPWYVGLFIMMFGRRIDYREKPGYIACTIA 139

Query: 144 AVIATLAIIFGATREADVW 154
           A++AT+A+I G ++ AD W
Sbjct: 140 AILATIAVILGVSKGADDW 154

[Close]
BLAST of MELO3C016688.2 vs. TAIR10
Match: AT1G53560.1 (Ribosomal protein L18ae family)

HSP 1 Score: 134.4 bits (337), Expect = 5.8e-32
Identity = 67/138 (48.55%), Postives = 81/138 (58.70%), Query Frame = 0 

Query: 27  YGTFQGVANYPP-----------VEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIV 86
           YGTFQGV  YPP                           D S +Q Y    Q V GY + 
Sbjct: 16  YGTFQGVPTYPPXXXXXXXXXXXXXXXXXXXXXXXXXHHDISVHQ-YIQEXQTVAGYPVS 75

Query: 87  EGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRVDYREKPGYVACSIAA 146
           +GRP R+  LPCCG+G+GWFLFIIGF L AIPWY G  +++C R+D REKPGYVAC+IAA
Sbjct: 76  QGRPARQNRLPCCGLGLGWFLFIIGFLLGAIPWYVGVFILVCARIDPREKPGYVACTIAA 135

Query: 147 VIATLAIIFGATREADVW 154
           V+AT+ I+FG      VW
Sbjct: 136 VVATITIVFGVMGGRGVW 152

[Close]
BLAST of MELO3C016688.2 vs. TAIR10
Match: AT1G29970.2 (60S ribosomal protein L18A-1)

HSP 1 Score: 117.5 bits (293), Expect = 7.4e-27
Identity = 62/120 (51.67%), Postives = 76/120 (63.33%), Query Frame = 0 

Query: 26  HYGTFQGVANY----PPVEFPQPTRP----PG--LSDSDDPSQYQHYAHGYQ-AVPGYAI 85
           +YGTFQGVAN+    PP +F QP  P    PG    +        +YA G+   VP Y +
Sbjct: 20  YYGTFQGVANFPTPTPPPQFMQPQHPITTFPGHAYQNLQGHGGGVNYAQGFPVVVPDYTV 79

Query: 86  VEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRVDYREKPGYVACSIA 135
           VE RP+ E  LPCCG+G+GWFLFI+GF    IPWY GA ++L   VD+REK GYVACSIA
Sbjct: 80  VEVRPMIEHELPCCGLGMGWFLFIMGFLFGGIPWYLGAFIVLVTSVDHREKAGYVACSIA 139

[Close]
BLAST of MELO3C016688.2 vs. TAIR10
Match: AT3G14595.1 (Ribosomal protein L18ae family)

HSP 1 Score: 85.1 bits (209), Expect = 4.1e-17
Identity = 39/67 (58.21%), Postives = 50/67 (74.63%), Query Frame = 0 

Query: 87  CCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLAIIFGA 146
           CCGIGIGW LFI+GFF  A+PWY G  L+L  R + RE+PGY+AC++ AV AT+ +IFG 
Sbjct: 67  CCGIGIGWVLFILGFFF-ALPWYIGFFLLLFSR-NPRERPGYIACAVGAVFATIIVIFGT 126

Query: 147 TREADVW 154
            R + VW
Sbjct: 127 VRGSGVW 131

[Close]
BLAST of MELO3C016688.2 vs. TAIR10
Match: AT1G54217.2 (Ribosomal protein L18ae family)

HSP 1 Score: 50.4 bits (119), Expect = 1.1e-06
Identity = 27/62 (43.55%), Postives = 37/62 (59.68%), Query Frame = 0 

Query: 84  PLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCG--RVDYREKPGYVACSIAAVIATLA 143
           PLPC G GIGWF F++G F+    WY    L L      D RE+ G  A +IAA+I ++A
Sbjct: 32  PLPCFGFGIGWFSFLLG-FVFPFAWYVATFLYLISYYHRDPRERSGLAASAIAALIFSVA 91

[Close]
BLAST of MELO3C016688.2 vs. Swiss-Prot
Match: sp|Q8L9S1|R18AL_ARATH (60S ribosomal protein L18a-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g29970 PE=2 SV=2)

HSP 1 Score: 131.7 bits (330), Expect = 6.8e-30
Identity = 67/139 (48.20%), Postives = 89/139 (64.03%), Query Frame = 0 

Query: 26  HYGTFQGVANY----PPVEFPQPTRP----PG--LSDSDDPSQYQHYAHGYQ-AVPGYAI 85
           +YGTFQGVAN+    PP +F QP  P    PG    +        +YA G+   VP Y +
Sbjct: 20  YYGTFQGVANFPTPTPPPQFMQPQHPITTFPGHAYQNLQGHGGGVNYAQGFPVVVPDYTV 79

Query: 86  VEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRVDYREKPGYVACSIA 145
           VE RP+ E  LPCCG+G+GWFLFI+GF    IPWY GA ++L   VD+REK GYVACSIA
Sbjct: 80  VEVRPMIEHELPCCGLGMGWFLFIMGFLFGGIPWYLGAFIVLVTSVDHREKAGYVACSIA 139

Query: 146 AVIATLAIIFGATREADVW 154
           +V+  +A++ G T + ++W
Sbjct: 140 SVVYLIAVMLGMTGDINIW 158

[Close]
BLAST of MELO3C016688.2 vs. TrEMBL
Match: tr|A0A1S3BUZ1|A0A1S3BUZ1_CUCME (60S ribosomal protein L18a-like protein OS=Cucumis melo OX=3656 GN=LOC103493475 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 3.6e-76
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0 

Query: 1   MSQEDKSAXXXXXXXXXXXXXSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQ 60
           MSQEDKSAXXXXXXXXXXXXXSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQ
Sbjct: 1   MSQEDKSAXXXXXXXXXXXXXSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQ 60

Query: 61  HYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRV 120
           HYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRV
Sbjct: 61  HYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRV 120

Query: 121 DYREKPGYVACSIAAVIATLAIIFGATREADVW 154
           DYREKPGYVACSIAAVIATLAIIFGATREADVW
Sbjct: 121 DYREKPGYVACSIAAVIATLAIIFGATREADVW 153

[Close]
BLAST of MELO3C016688.2 vs. TrEMBL
Match: tr|A0A0A0L1Y0|A0A0A0L1Y0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G621210 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.7e-68
Identity = 138/153 (90.20%), Postives = 143/153 (93.46%), Query Frame = 0 

Query: 1   MSQEDKSAXXXXXXXXXXXXXSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQYQ 60
           MS++DKSA  XXXXXXXXXXX  HPHYGTFQGVANYPPV F  PTR PG+ DSDDPSQYQ
Sbjct: 1   MSEQDKSAAVXXXXXXXXXXXXPHPHYGTFQGVANYPPVGFSHPTRLPGVPDSDDPSQYQ 60

Query: 61  HYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRV 120
           HYAHGYQAVPGYAIVEGRPVREP LPCCGIGIGWFLFIIGFFLAAIPWYAGAILI+CGRV
Sbjct: 61  HYAHGYQAVPGYAIVEGRPVREPRLPCCGIGIGWFLFIIGFFLAAIPWYAGAILIICGRV 120

Query: 121 DYREKPGYVACSIAAVIATLAIIFGATREADVW 154
           DYREKPGYVACSIAAVIAT+AIIFGATREADVW
Sbjct: 121 DYREKPGYVACSIAAVIATVAIIFGATREADVW 153

[Close]
BLAST of MELO3C016688.2 vs. TrEMBL
Match: tr|W9QZI1|W9QZI1_9ROSA (60S ribosomal protein L18a-1 OS=Morus notabilis OX=981085 GN=L484_024642 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.7e-46
Identity = 89/140 (63.57%), Postives = 109/140 (77.86%), Query Frame = 0 

Query: 25  PHYGTFQGVANYPP---------VEFPQPTRPPGLSDSDDPSQY--QHYAHGYQAVPGYA 84
           P YGTFQGVANYPP         + FPQP  PPG++   +PS +   +YA GYQ VPGYA
Sbjct: 24  PQYGTFQGVANYPPPRPPHHQPAIGFPQPVPPPGVA---EPSAHHPDYYARGYQTVPGYA 83

Query: 85  IVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRVDYREKPGYVACSI 144
           + EGRPVRE  LPCCGIGIGWFLFIIGFFLA +PWYAGA+++LC R+DYREKPGY+AC++
Sbjct: 84  VAEGRPVRERRLPCCGIGIGWFLFIIGFFLAGVPWYAGALILLCSRIDYREKPGYIACTV 143

Query: 145 AAVIATLAIIFGATREADVW 154
           AA++AT+AI+ G T+ AD W
Sbjct: 144 AAILATIAIVLGVTKGADDW 160

[Close]
BLAST of MELO3C016688.2 vs. TrEMBL
Match: tr|A0A067LCW3|A0A067LCW3_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_20159 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.3e-46
Identity = 90/132 (68.18%), Postives = 103/132 (78.03%), Query Frame = 0 

Query: 25  PHYGTFQGVANYPP---VEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVR 84
           P YGTFQGVANYP    + FPQP  PPG ++   P QY  YAHGYQ VPGYA+ +GRPVR
Sbjct: 24  PQYGTFQGVANYPQQPVIGFPQPVPPPGATEPSAPPQY--YAHGYQTVPGYAVADGRPVR 83

Query: 85  EPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGRVDYREKPGYVACSIAAVIATLA 144
           E  LPCCGIG+GWFLFIIGFFL AIPWY G  +ILC R+D REKPGY+AC+IAAV+AT+A
Sbjct: 84  EHRLPCCGIGLGWFLFIIGFFLGAIPWYVGLFIILCARIDPREKPGYIACTIAAVLATVA 143

Query: 145 IIFGATREADVW 154
           II G T+ AD W
Sbjct: 144 IILGVTKGADDW 153

[Close]
BLAST of MELO3C016688.2 vs. TrEMBL
Match: tr|A0A2R6QT36|A0A2R6QT36_ACTCH (60S ribosomal protein L18a-like protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc14872 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.5e-45
Identity = 92/128 (71.88%), Postives = 104/128 (81.25%), Query Frame = 0 

Query: 25  PHYGTFQGVANYPP---VEFPQPTRPPGLSDSDDPSQYQHYAHGYQAVPGYAIVEGRPVR 84
           P YGTFQGVANYP    + FPQP  PPG +D    S  Q+YAHGYQAVPGYA+ EGRPVR
Sbjct: 22  PQYGTFQGVANYPAQPVIGFPQPVPPPGATD----SSAQYYAHGYQAVPGYAVAEGRPVR 81

Query: 85  EPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGR-VDYREKPGYVACSIAAVIATL 144
           E  LPCCGIG GWFLFIIGFFLAAIPWY GAI++LC R VDYREKPGY+AC+IAAV+A +
Sbjct: 82  EGHLPCCGIGFGWFLFIIGFFLAAIPWYVGAIILLCVRSVDYREKPGYIACTIAAVLAAI 141

Query: 145 AIIFGATR 149
           A+IFG T+
Sbjct: 142 AVIFGVTK 145

The following BLAST results are available for this feature:
BLAST of MELO3C016688.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008452440.15.4e-76100.00PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis melo][more]
XP_004146004.14.1e-6890.20PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis sativus] >KGN55009.1... [more]
XP_022936871.11.9e-6081.0560S ribosomal protein L18a-like protein [Cucurbita moschata][more]
XP_022976878.14.2e-6081.7060S ribosomal protein L18a-like protein [Cucurbita maxima][more]
XP_023536200.15.4e-6081.7060S ribosomal protein L18a-like protein [Cucurbita pepo subsp. pepo][more]
BLAST of MELO3C016688.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G17080.16.6e-4458.99Ribosomal protein L18ae family[more]
AT1G53560.15.8e-3248.55Ribosomal protein L18ae family[more]
AT1G29970.27.4e-2751.6760S ribosomal protein L18A-1[more]
AT3G14595.14.1e-1758.21Ribosomal protein L18ae family[more]
AT1G54217.21.1e-0643.55Ribosomal protein L18ae family[more]
BLAST of MELO3C016688.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8L9S1|R18AL_ARATH6.8e-3048.2060S ribosomal protein L18a-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g2... [more]
BLAST of MELO3C016688.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BUZ1|A0A1S3BUZ1_CUCME3.6e-76100.0060S ribosomal protein L18a-like protein OS=Cucumis melo OX=3656 GN=LOC103493475 ... [more]
tr|A0A0A0L1Y0|A0A0A0L1Y0_CUCSA2.7e-6890.20Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G621210 PE=4 SV=1[more]
tr|W9QZI1|W9QZI1_9ROSA1.7e-4663.5760S ribosomal protein L18a-1 OS=Morus notabilis OX=981085 GN=L484_024642 PE=4 SV... [more]
tr|A0A067LCW3|A0A067LCW3_JATCU2.3e-4668.18Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_20159 PE=4 SV=1[more]
tr|A0A2R6QT36|A0A2R6QT36_ACTCH1.5e-4571.8860S ribosomal protein L18a-like protein OS=Actinidia chinensis var. chinensis OX... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR02887750S_L18Ae/Ribosomal_L18a/L20
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005840 ribosome
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C016688.2.1MELO3C016688.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10052:SF3060S RIBOSOMAL PROTEIN L18A-LIKE PROTEINcoord: 1..153
IPR02887750S ribosomal protein L18Ae/60S ribosomal protein L20 and L18aPANTHERPTHR1005260S RIBOSOMAL PROTEIN L18Acoord: 1..153

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C016688.2Csa4G621210Cucumber (Chinese Long) v2cumedB293
MELO3C016688.2CSPI04G22290Wild cucumber (PI 183967)cpimedB297
MELO3C016688.2Cucsa.058170Cucumber (Gy14) v1cgymedB045
MELO3C016688.2CmoCh09G006800Cucurbita moschata (Rifu)cmomedB035
MELO3C016688.2Lsi04G019560Bottle gourd (USVL1VR-Ls)lsimedB335
MELO3C016688.2CsGy4G020800Cucumber (Gy14) v2cgybmedB263
MELO3C016688.2Cla023290Watermelon (97103) v1medwmB528
MELO3C016688.2Cla97C11G223030Watermelon (97103) v2medwmbB464
MELO3C016688.2Bhi09G002929Wax gourdmedwgoB614
MELO3C016688.2CsaV3_4G032660Cucumber (Chinese Long) v3cucmedB301
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None