MELO3C016410 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C016410
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionReversion-to-ethylene sensitivity1
Locationchr7 : 22700253 .. 22702301 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACTGTAGAAACCGATCAAATTGATCGGTGATCAGAAGTTGCGTTCTTGGATTCTTCACCAAAATTGTTCTGATTGGTAACTTCAACTTTATTTCACACTTCTCTTCAGAAAATTGTTTATTTGTACTTCAAATTCTTCGCGTAACTTGTTCGTTTTACCTGTTTGATTTGTGTTCTATGCACTTGGTGTTTGACTATCCCTAAAGTTGAGGAGATTTGGGAACTTCATCTCGTAATTTGATTGTAGGTAGCCGAGGGATTTTCTTTTAACCTATTTTTTCACTTGTGTTTTCTGTGATCGAGAATGAATATACGGGTTAATGGGTGCTTGCAATTCCAGCCTATGGCTGCTTCTCTAATGAATACTGGAAGTTACTACTCAACTTCATACAATGTCTTTCTCTCTTCTTTCTTCCTTCGTCCTTTGCATGAATTCGTTTGAAAGTTTGGTTGAACACTCTAATTTCATTCTTCAAGATGAAATTTTGGCCTCTGTCTAAACTTTTTCTATTACATTCTCGCTTTCTGCGATCATCCTCCCAAAACGGTAATAAGATTTGCTGAGATTATGAAATTGACGGAAGGACATTGGGATCGTTTAATGTTAGGTCAAATTTTTTCTTGAAGCTCTGTTAAATTAAGTGTATTCATTTCATTTCAGGCAGCATTTTATGAGTTTGGAAATGGAATCAAATAAGGATCCTGAGAATCAGCTCATGATTGAAGGAAATATTGCTCAGCATATGAAGATCGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCTTGGCTTGTTCCTTTCATTGGTCACATTGGTATTGGTAGAGAGGACGGAGTAATCTTGGACTTTGCTGGCCCCAATTTTGTGTGTGTGGACAACTTCACATTTGGAGCTGTCGCACGGTATCTTCAAATCAACAGAGATAAGGTATAAGCTAGTTTCCTCAATTGAACTAAAGATCAATCCCTTACAATCATCTTTCCCTCAATTTTGCTGTGTGACCAAAATTCATGACATGGTATTGTGATAGGAACTAATTTCCCATTAGTTAGTTTTTTAGCTCATTTTCTACCCAACTGATTTTATCATATGTTAGTGATATAATATTAGATCTGCTTTCATCTATCAATTTAAGTTTTTGGATCAATCGGTGATTTAAAGTAGTATCAAAGTACGTAGTCCAGAAGGTTTTGTGTTCAAAACCTACAAGCTTATTTCTTCTAAGCTTGATTTGGGTCTTCTACATATTTCAAGCTCAAAGTGAGGAGCGTTAGTAATATAATATTAAATTTGTTTGACCCATTAGCTCAAGTTTTTTGTTTAATTGTTGATTTAACAAATGTACTTGACGTGCAGTGTTGCATTTCGGCTCATAGAAGTGAAGAAGAATTGAGGGAAGTTGATCGTAGCAGAGAAATTTCAACATGGGATGATGCATTGCGCAGGAGCACTCAAGAGTTCCAACACCGATCCTACAATCTCTTGACATGCAATTGTCATTCCTTTGTGGCTAATAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTCAAGGGTCGCTGGGTCAGTAAAGGAGCTGTTATCCGAACGTTCTTACCATTTGTTGTGGTATTCAGTATTGGACTCGCACTGGGGGATACTACGTTTCTTACCTTCTTGGCATTCTTCACTTTCTTCTTGGTTGGTTGGTTCATTCTCGGTACTTACGTCTTCAAAAATTTGGTTCAGTTGTAAAATGTATTACACATTGGATTCTGCGAGTTAAGTGAAGGTCAATTGGTTTTCTTTGATGTATTTGTCCAAATCTATGTTATTGTGCCGTGCAGTTCGTATGGCGTATTATATACCGTATAGATAGGAGGCAAATCATTTGATATAACTCACGACCGTGATTACTGGCAGCTTGTTTAGGCCATTATTCAATAGAGTTCATGAATTGCTGATTAGATAAGAGATTATGATACATCAAAATATCTAAATAATTCGACT

mRNA sequence

CAACTGTAGAAACCGATCAAATTGATCGGTGATCAGAAGTTGCGTTCTTGGATTCTTCACCAAAATTGTTCTGATTGGCAGCATTTTATGAGTTTGGAAATGGAATCAAATAAGGATCCTGAGAATCAGCTCATGATTGAAGGAAATATTGCTCAGCATATGAAGATCGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCTTGGCTTGTTCCTTTCATTGGTCACATTGGTATTGGTAGAGAGGACGGAGTAATCTTGGACTTTGCTGGCCCCAATTTTGTGTGTGTGGACAACTTCACATTTGGAGCTGTCGCACGGTATCTTCAAATCAACAGAGATAAGTGTTGCATTTCGGCTCATAGAAGTGAAGAAGAATTGAGGGAAGTTGATCGTAGCAGAGAAATTTCAACATGGGATGATGCATTGCGCAGGAGCACTCAAGAGTTCCAACACCGATCCTACAATCTCTTGACATGCAATTGTCATTCCTTTGTGGCTAATAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTCAAGGGTCGCTGGGTCAGTAAAGGAGCTGTTATCCGAACGTTCTTACCATTTGTTGTGGTATTCAGTATTGGACTCGCACTGGGGGATACTACGTTTCTTACCTTCTTGGCATTCTTCACTTTCTTCTTGGTTGGTTGGTTCATTCTCGGTACTTACGTCTTCAAAAATTTGGTTCAGTTGTAAAATGTATTACACATTGGATTCTGCGAGTTAAGTGAAGGTCAATTGGTTTTCTTTGATGTATTTGTCCAAATCTATGTTATTGTGCCGTGCAGTTCGTATGGCGTATTATATACCGTATAGATAGGAGGCAAATCATTTGATATAACTCACGACCGTGATTACTGGCAGCTTGTTTAGGCCATTATTCAATAGAGTTCATGAATTGCTGATTAGATAAGAGATTATGATACATCAAAATATCTAAATAATTCGACT

Coding sequence (CDS)

ATGAGTTTGGAAATGGAATCAAATAAGGATCCTGAGAATCAGCTCATGATTGAAGGAAATATTGCTCAGCATATGAAGATCGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCTTGGCTTGTTCCTTTCATTGGTCACATTGGTATTGGTAGAGAGGACGGAGTAATCTTGGACTTTGCTGGCCCCAATTTTGTGTGTGTGGACAACTTCACATTTGGAGCTGTCGCACGGTATCTTCAAATCAACAGAGATAAGTGTTGCATTTCGGCTCATAGAAGTGAAGAAGAATTGAGGGAAGTTGATCGTAGCAGAGAAATTTCAACATGGGATGATGCATTGCGCAGGAGCACTCAAGAGTTCCAACACCGATCCTACAATCTCTTGACATGCAATTGTCATTCCTTTGTGGCTAATAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTCAAGGGTCGCTGGGTCAGTAAAGGAGCTGTTATCCGAACGTTCTTACCATTTGTTGTGGTATTCAGTATTGGACTCGCACTGGGGGATACTACGTTTCTTACCTTCTTGGCATTCTTCACTTTCTTCTTGGTTGGTTGGTTCATTCTCGGTACTTACGTCTTCAAAAATTTGGTTCAGTTGTAA

Protein sequence

MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL*
Homology
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BLAST of MELO3C016410 vs. Swiss-Prot
Match: RTH_ARATH (Protein RTE1-HOMOLOG OS=Arabidopsis thaliana GN=RTH PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.2e-78
Identity = 139/233 (59.66%), Postives = 172/233 (73.82%), Query Frame = 1 

Query: 6   ESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVI 65
           E+  D E+++MI   ++  MKIDP+R RFPCCIVWTPLP ISWLVPFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVARYLQINRD--------KCCISAHRSEEELREVDRSREIST 125
           LDFAGPNFVCVDNF FGAV+RY+QIN++            +  R  E+  E D   +  T
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKEMESSRSSSSGMFNGERRYEQ--EEDSHEKEPT 122

Query: 126 WDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSK 185
           WDDALR+STQE+QH SYN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV+K
Sbjct: 123 WDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWVNK 182

Query: 186 GAVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
            A++++ LP ++V++IG+ LG  TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 TAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

[Close]
BLAST of MELO3C016410 vs. Swiss-Prot
Match: RTE1_ARATH (Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana GN=RTE1 PE=1 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.7e-61
Identity = 112/210 (53.33%), Postives = 148/210 (70.48%), Query Frame = 1 

Query: 26  KIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVA 85
           +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ VD+F FG  A
Sbjct: 43  EIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPA 102

Query: 86  RYLQINRDKCCI----SAHRSEEELREVDRSREISTWDDALRRSTQEFQHRSYNLLTCNC 145
           RYLQ++R KCC+      H  +   +  D      TWD+AL  ST+ F+H++YN+ TCNC
Sbjct: 103 RYLQLDRTKCCLPPNMGGHTCKYGFKHTDFG-TARTWDNALSSSTRSFEHKTYNIFTCNC 162

Query: 146 HSFVANNLNRLGFRTGG---WNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLALG 205
           HSFVAN LNRL +  GG   WN+VN+A L+ +KG+W++  +V+R+FLP  VV S+G+ L 
Sbjct: 163 HSFVANCLNRLCY--GGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLV 222

Query: 206 DTTFLTFLAFFTFFLVGWFILGTYVFKNLV 229
              FL  L+ F+  L  WFI+ TY FKN++
Sbjct: 223 GWPFLIGLSSFSLLLFAWFIIATYCFKNII 249

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BLAST of MELO3C016410 vs. Swiss-Prot
Match: TM222_HUMAN (Transmembrane protein 222 OS=Homo sapiens GN=TMEM222 PE=1 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-31
Identity = 69/172 (40.12%), Postives = 99/172 (57.56%), Query Frame = 1 

Query: 27  IDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAR 86
           +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  FG  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 87  YLQINRDKCCISAHRSEEELREVDRSREISTWDDALRRSTQEFQHRSYNLLTCNCHSFVA 146
           Y +++  +   S                 + WD A+  +++E++HR +NL   NCHS VA
Sbjct: 105 YWKLDPAQVYASGP---------------NAWDTAVHDASEEYKHRMHNLCCDNCHSHVA 164

Query: 147 NNLNRLGFRTG-GWNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLAL 198
             LN + +     WN+V L     L G++VS GA ++T+LPF+++  I L +
Sbjct: 165 LALNLMRYNNSTNWNMVTLCFFCLLYGKYVSVGAFVKTWLPFILLLGIILTV 201

[Close]
BLAST of MELO3C016410 vs. Swiss-Prot
Match: TM222_MOUSE (Transmembrane protein 222 OS=Mus musculus GN=Tmem222 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.4e-31
Identity = 68/172 (39.53%), Postives = 99/172 (57.56%), Query Frame = 1 

Query: 27  IDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAR 86
           +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  FG  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSAGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 87  YLQINRDKCCISAHRSEEELREVDRSREISTWDDALRRSTQEFQHRSYNLLTCNCHSFVA 146
           + +++  +   S                 + WD A+  +++E++HR +NL   NCHS VA
Sbjct: 105 FWKLDPGQVYASGP---------------NAWDTAVHDASEEYKHRMHNLCCDNCHSHVA 164

Query: 147 NNLNRLGFRTG-GWNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLAL 198
             LN + +     WN+V L     + G++VS GA ++T+LPFV++  I L +
Sbjct: 165 LALNLMRYNNSTNWNMVTLCCFCLIYGKYVSVGAFVKTWLPFVLLLGIILTV 201

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BLAST of MELO3C016410 vs. TrEMBL
Match: A0A0A0KXZ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G044470 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 1.7e-129
Identity = 226/230 (98.26%), Postives = 229/230 (99.57%), Query Frame = 1 

Query: 1   MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60
           MSLEMES+KDPENQLMIEGNIAQ+MKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVD SREISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180
           ALRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]
BLAST of MELO3C016410 vs. TrEMBL
Match: F6GWR6_VITVI (C-repeat binding transcription factor OS=Vitis vinifera GN=CBF2 PE=2 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 3.3e-96
Identity = 167/231 (72.29%), Postives = 193/231 (83.55%), Query Frame = 1 

Query: 5   MESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 64
           M+SN DPE+ +MIE +++Q M+IDP RARFPCCIVWTPLPVISWL+PF+GHIGI REDGV
Sbjct: 1   MDSNADPEDHMMIERSVSQMMQIDPRRARFPCCIVWTPLPVISWLIPFVGHIGICREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSRE-----ISTWD 124
           ILDFAGPNFVCVDNF FGAV RY+QI+++KCCIS H      RE  R ++     I TWD
Sbjct: 61  ILDFAGPNFVCVDNFAFGAVTRYIQISKEKCCISPHHPAPYRRENGRGQDETEIDILTWD 120

Query: 125 DALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGA 184
           DALR+STQEFQH+SYNL TCNCHSFVANNLNRLGF  GGWNVVNLAALIFLKGRWVS  +
Sbjct: 121 DALRKSTQEFQHQSYNLFTCNCHSFVANNLNRLGFYDGGWNVVNLAALIFLKGRWVSTTS 180

Query: 185 VIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           +I++FLPF +V ++GL  G  TFLTFLAFFTF LVGWF+LGTY FKNL+ L
Sbjct: 181 MIKSFLPFAIVSALGLFFGGLTFLTFLAFFTFLLVGWFLLGTYCFKNLIHL 231

[Close]
BLAST of MELO3C016410 vs. TrEMBL
Match: A0A061DFF6_THECC (RTE1 isoform 1 OS=Theobroma cacao GN=TCM_000278 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 9.1e-94
Identity = 169/233 (72.53%), Postives = 192/233 (82.40%), Query Frame = 1 

Query: 5   MESNKDPENQLMIEGNIA--QHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGRED 64
           ME + D ++QLM+EG +   + M+IDP R RFPCCIVWTPLPV+SWLVPFIGH+GI RED
Sbjct: 1   MEEHVDSDHQLMVEGGLTFPRSMQIDPRRERFPCCIVWTPLPVLSWLVPFIGHVGICRED 60

Query: 65  GVILDFAGPNFVCVDNFTFGAVARYLQINRDK-CCISAHRS----EEELREVDRSREIST 124
           GVILDFAGPNFVCVDNFTFGAVARY+QIN DK CCIS H S    E+E +  D  RE  T
Sbjct: 61  GVILDFAGPNFVCVDNFTFGAVARYIQINIDKECCISPHPSAFKGEQEYQHDDPRRERLT 120

Query: 125 WDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSK 184
           WDD LR+STQEFQHRSY+L TCNCHSFVANNLNRLGFR+GGWNVVNLA LIFLKG WVSK
Sbjct: 121 WDDTLRKSTQEFQHRSYSLFTCNCHSFVANNLNRLGFRSGGWNVVNLAVLIFLKGCWVSK 180

Query: 185 GAVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
            A +R+FLPFV+V  +GLA G TT+LTFLA F F LVGWF+LGTY FK+L+ L
Sbjct: 181 TAFLRSFLPFVIVSGLGLAFGGTTYLTFLALFAFLLVGWFLLGTYCFKSLIHL 233

[Close]
BLAST of MELO3C016410 vs. TrEMBL
Match: A0A103Y5G2_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_018829 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 5.9e-93
Identity = 158/231 (68.40%), Postives = 193/231 (83.55%), Query Frame = 1 

Query: 5   MESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 64
           MES+ +P + +MIE  + Q+M+IDP RARFPCCIVWTPLPVISWL+PF+GHIGIGREDGV
Sbjct: 1   MESDTEPNHSMMIEHTVPQNMQIDPSRARFPCCIVWTPLPVISWLLPFVGHIGIGREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAH-----RSEEELREVDRSREISTWD 124
           ILDFAGPNFVCVDNFTFGAVARY+QI+++KC I+ H     RSEEE R V+  R   TWD
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYVQISKEKCSITPHPSSMYRSEEEYRLVESGRNQHTWD 120

Query: 125 DALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGA 184
           DAL++STQE+QHR+YN+LTCNCHSFVA+NLNRL F+ GGWNVVN+AALI LKG+WV+  +
Sbjct: 121 DALKKSTQEYQHRTYNILTCNCHSFVAHNLNRLEFQNGGWNVVNVAALILLKGQWVNTTS 180

Query: 185 VIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           +IR ++PFV++F +G+  G   FLTFLAFF   LVGWFILGTY FKN ++L
Sbjct: 181 MIRAYVPFVMIFLVGITFGGANFLTFLAFFAILLVGWFILGTYCFKNFIKL 231

[Close]
BLAST of MELO3C016410 vs. TrEMBL
Match: W9SD51_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026815 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.7e-92
Identity = 162/230 (70.43%), Postives = 191/230 (83.04%), Query Frame = 1 

Query: 5   MESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 64
           M+S+ D ENQLM EG+ + + +IDP+RARFPCCIVWTPLPVISWLVPF+GHIGI REDGV
Sbjct: 1   MDSDADTENQLMAEGSSSPNFQIDPKRARFPCCIVWTPLPVISWLVPFVGHIGICREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCI----SAHRSEEELREVDRSREISTWDD 124
           ILDFAGPNFVCVDNF FG VARYL I+  +C      S H+SE++ R+    REISTWDD
Sbjct: 61  ILDFAGPNFVCVDNFAFGVVARYLHISLHECYALPLPSLHKSEDQHRQDQPEREISTWDD 120

Query: 125 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 184
           ALR+ TQ FQHR+Y+L TCNCHSFVANNLNRL F  GGWNVVNLAALIF+KG+WVSK ++
Sbjct: 121 ALRKGTQVFQHRAYSLFTCNCHSFVANNLNRLQFSNGGWNVVNLAALIFIKGKWVSKASM 180

Query: 185 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           +R+FLPF+VVFS+G ALG ++FL FLA F  FLVGWF+ GTY FKNL+QL
Sbjct: 181 VRSFLPFLVVFSLGFALGGSSFLIFLALFIVFLVGWFLFGTYCFKNLIQL 230

[Close]
BLAST of MELO3C016410 vs. TAIR10
Match: AT3G51040.1 (AT3G51040.1 RTE1-homolog)

HSP 1 Score: 294.3 bits (752), Expect = 6.6e-80
Identity = 139/233 (59.66%), Postives = 172/233 (73.82%), Query Frame = 1 

Query: 6   ESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVI 65
           E+  D E+++MI   ++  MKIDP+R RFPCCIVWTPLP ISWLVPFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVARYLQINRD--------KCCISAHRSEEELREVDRSREIST 125
           LDFAGPNFVCVDNF FGAV+RY+QIN++            +  R  E+  E D   +  T
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKEMESSRSSSSGMFNGERRYEQ--EEDSHEKEPT 122

Query: 126 WDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSK 185
           WDDALR+STQE+QH SYN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV+K
Sbjct: 123 WDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWVNK 182

Query: 186 GAVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
            A++++ LP ++V++IG+ LG  TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 TAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

[Close]
BLAST of MELO3C016410 vs. TAIR10
Match: AT2G26070.1 (AT2G26070.1 Protein of unknown function (DUF778))

HSP 1 Score: 237.3 bits (604), Expect = 9.6e-63
Identity = 112/210 (53.33%), Postives = 148/210 (70.48%), Query Frame = 1 

Query: 26  KIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVA 85
           +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ VD+F FG  A
Sbjct: 43  EIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPA 102

Query: 86  RYLQINRDKCCI----SAHRSEEELREVDRSREISTWDDALRRSTQEFQHRSYNLLTCNC 145
           RYLQ++R KCC+      H  +   +  D      TWD+AL  ST+ F+H++YN+ TCNC
Sbjct: 103 RYLQLDRTKCCLPPNMGGHTCKYGFKHTDFG-TARTWDNALSSSTRSFEHKTYNIFTCNC 162

Query: 146 HSFVANNLNRLGFRTGG---WNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLALG 205
           HSFVAN LNRL +  GG   WN+VN+A L+ +KG+W++  +V+R+FLP  VV S+G+ L 
Sbjct: 163 HSFVANCLNRLCY--GGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLV 222

Query: 206 DTTFLTFLAFFTFFLVGWFILGTYVFKNLV 229
              FL  L+ F+  L  WFI+ TY FKN++
Sbjct: 223 GWPFLIGLSSFSLLLFAWFIIATYCFKNII 249

[Close]
BLAST of MELO3C016410 vs. NCBI nr
Match: gi|659102422|ref|XP_008452120.1| (PREDICTED: protein RTE1-HOMOLOG [Cucumis melo])

HSP 1 Score: 477.6 bits (1228), Expect = 1.2e-131
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1 

Query: 1   MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60
           MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 1   MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDD 120

Query: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180
           ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]
BLAST of MELO3C016410 vs. NCBI nr
Match: gi|449457506|ref|XP_004146489.1| (PREDICTED: protein RTE1-HOMOLOG [Cucumis sativus])

HSP 1 Score: 469.9 bits (1208), Expect = 2.5e-129
Identity = 226/230 (98.26%), Postives = 229/230 (99.57%), Query Frame = 1 

Query: 1   MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60
           MSLEMES+KDPENQLMIEGNIAQ+MKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVD SREISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180
           ALRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]
BLAST of MELO3C016410 vs. NCBI nr
Match: gi|225431245|ref|XP_002274106.1| (PREDICTED: protein RTE1-HOMOLOG isoform X1 [Vitis vinifera])

HSP 1 Score: 359.4 bits (921), Expect = 4.8e-96
Identity = 167/231 (72.29%), Postives = 193/231 (83.55%), Query Frame = 1 

Query: 5   MESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 64
           M+SN DPE+ +MIE +++Q M+IDP RARFPCCIVWTPLPVISWL+PF+GHIGI REDGV
Sbjct: 1   MDSNADPEDHMMIERSVSQMMQIDPRRARFPCCIVWTPLPVISWLIPFVGHIGICREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSRE-----ISTWD 124
           ILDFAGPNFVCVDNF FGAV RY+QI+++KCCIS H      RE  R ++     I TWD
Sbjct: 61  ILDFAGPNFVCVDNFAFGAVTRYIQISKEKCCISPHHPAPYRRENGRGQDETEIDILTWD 120

Query: 125 DALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGA 184
           DALR+STQEFQH+SYNL TCNCHSFVANNLNRLGF  GGWNVVNLAALIFLKGRWVS  +
Sbjct: 121 DALRKSTQEFQHQSYNLFTCNCHSFVANNLNRLGFYDGGWNVVNLAALIFLKGRWVSTTS 180

Query: 185 VIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           +I++FLPF +V ++GL  G  TFLTFLAFFTF LVGWF+LGTY FKNL+ L
Sbjct: 181 MIKSFLPFAIVSALGLFFGGLTFLTFLAFFTFLLVGWFLLGTYCFKNLIHL 231

[Close]
BLAST of MELO3C016410 vs. NCBI nr
Match: gi|657948444|ref|XP_008337789.1| (PREDICTED: protein RTE1-HOMOLOG-like isoform X1 [Malus domestica])

HSP 1 Score: 352.8 bits (904), Expect = 4.5e-94
Identity = 159/232 (68.53%), Postives = 199/232 (85.78%), Query Frame = 1 

Query: 3   LEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGRED 62
           L ME++  PE+ L I+G+ +  ++IDP+R+RFPCCIVWTPLPVISWLVPF+GHIGI RED
Sbjct: 29  LAMETSAGPEHXLRIDGSDSPTLQIDPKRSRFPCCIVWTPLPVISWLVPFVGHIGICRED 88

Query: 63  GVILDFAGPNFVCVDNFTFGAVARYLQINRDKCC----ISAHRSEEELREVDRSREISTW 122
           GVILDFAGPNFVCVDNF+FGA  RY+QIN++KCC    +S ++SE++  E +  R+I TW
Sbjct: 89  GVILDFAGPNFVCVDNFSFGAATRYIQINKEKCCAITDLSEYQSEDQYGENEPGRDIKTW 148

Query: 123 DDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKG 182
           DDAL++ TQEFQHR+YNL TCNCHSFVANNLNRLGFR+GGWNVVNLAALIFLKG+WVS  
Sbjct: 149 DDALQKGTQEFQHRAYNLFTCNCHSFVANNLNRLGFRSGGWNVVNLAALIFLKGQWVSTA 208

Query: 183 AVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           AV+++ LPF+++F +G+AL  +TFLT+L FFT FLVGWF+LGTY FK+L+QL
Sbjct: 209 AVVQSLLPFLIIFCLGVALAGSTFLTYLGFFTAFLVGWFLLGTYCFKSLIQL 260

[Close]
BLAST of MELO3C016410 vs. NCBI nr
Match: gi|657948446|ref|XP_008337795.1| (PREDICTED: protein RTE1-HOMOLOG-like isoform X2 [Malus domestica])

HSP 1 Score: 352.8 bits (904), Expect = 4.5e-94
Identity = 159/232 (68.53%), Postives = 199/232 (85.78%), Query Frame = 1 

Query: 3   LEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGRED 62
           L ME++  PE+ L I+G+ +  ++IDP+R+RFPCCIVWTPLPVISWLVPF+GHIGI RED
Sbjct: 28  LAMETSAGPEHXLRIDGSDSPTLQIDPKRSRFPCCIVWTPLPVISWLVPFVGHIGICRED 87

Query: 63  GVILDFAGPNFVCVDNFTFGAVARYLQINRDKCC----ISAHRSEEELREVDRSREISTW 122
           GVILDFAGPNFVCVDNF+FGA  RY+QIN++KCC    +S ++SE++  E +  R+I TW
Sbjct: 88  GVILDFAGPNFVCVDNFSFGAATRYIQINKEKCCAITDLSEYQSEDQYGENEPGRDIKTW 147

Query: 123 DDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKG 182
           DDAL++ TQEFQHR+YNL TCNCHSFVANNLNRLGFR+GGWNVVNLAALIFLKG+WVS  
Sbjct: 148 DDALQKGTQEFQHRAYNLFTCNCHSFVANNLNRLGFRSGGWNVVNLAALIFLKGQWVSTA 207

Query: 183 AVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           AV+++ LPF+++F +G+AL  +TFLT+L FFT FLVGWF+LGTY FK+L+QL
Sbjct: 208 AVVQSLLPFLIIFCLGVALAGSTFLTYLGFFTAFLVGWFLLGTYCFKSLIQL 259

The following BLAST results are available for this feature:
BLAST of MELO3C016410 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RTH_ARATH1.2e-7859.66Protein RTE1-HOMOLOG OS=Arabidopsis thaliana GN=RTH PE=2 SV=1[more]
RTE1_ARATH1.7e-6153.33Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana GN=RTE1 PE=1 ... [more]
TM222_HUMAN1.1e-3140.12Transmembrane protein 222 OS=Homo sapiens GN=TMEM222 PE=1 SV=2[more]
TM222_MOUSE2.4e-3139.53Transmembrane protein 222 OS=Mus musculus GN=Tmem222 PE=1 SV=1[more]
BLAST of MELO3C016410 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXZ7_CUCSA1.7e-12998.26Uncharacterized protein OS=Cucumis sativus GN=Csa_4G044470 PE=4 SV=1[more]
F6GWR6_VITVI3.3e-9672.29C-repeat binding transcription factor OS=Vitis vinifera GN=CBF2 PE=2 SV=1[more]
A0A061DFF6_THECC9.1e-9472.53RTE1 isoform 1 OS=Theobroma cacao GN=TCM_000278 PE=4 SV=1[more]
A0A103Y5G2_CYNCS5.9e-9368.40Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_018829 PE=4 ... [more]
W9SD51_9ROSA1.7e-9270.43Uncharacterized protein OS=Morus notabilis GN=L484_026815 PE=4 SV=1[more]
BLAST of MELO3C016410 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G51040.16.6e-8059.66 RTE1-homolog[more]
AT2G26070.19.6e-6353.33 Protein of unknown function (DUF778)[more]
BLAST of MELO3C016410 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659102422|ref|XP_008452120.1|1.2e-131100.00PREDICTED: protein RTE1-HOMOLOG [Cucumis melo][more]
gi|449457506|ref|XP_004146489.1|2.5e-12998.26PREDICTED: protein RTE1-HOMOLOG [Cucumis sativus][more]
gi|225431245|ref|XP_002274106.1|4.8e-9672.29PREDICTED: protein RTE1-HOMOLOG isoform X1 [Vitis vinifera][more]
gi|657948444|ref|XP_008337789.1|4.5e-9468.53PREDICTED: protein RTE1-HOMOLOG-like isoform X1 [Malus domestica][more]
gi|657948446|ref|XP_008337795.1|4.5e-9468.53PREDICTED: protein RTE1-HOMOLOG-like isoform X2 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008496DUF778
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU54752melon EST collection version 4.0transcribed_cluster
MU67332melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C016410T1MELO3C016410T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU54752MU54752transcribed_cluster
MU67332MU67332transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008496Protein of unknown function DUF778PANTHERPTHR20921UNCHARACTERIZEDcoord: 8..213
score: 9.0E
IPR008496Protein of unknown function DUF778PFAMPF05608DUF778coord: 43..93
score: 4.0E-21coord: 100..174
score: 9.2
NoneNo IPR availablePANTHERPTHR20921:SF1PROTEIN RTE1-HOMOLOGcoord: 8..213
score: 9.0E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C016410Csa4G044470Cucumber (Chinese Long) v2cumeB312
MELO3C016410Cla014561Watermelon (97103) v1mewmB505
MELO3C016410ClCG07G008790Watermelon (Charleston Gray)mewcgB484
MELO3C016410Cla97C07G135840Watermelon (97103) v2mewmbB490
MELO3C016410Bhi01G001884Wax gourdmewgoB568
MELO3C016410CSPI04G05240Wild cucumber (PI 183967)cpimeB310
MELO3C016410Cucsa.201110Cucumber (Gy14) v1cgymeB366
MELO3C016410CmaCh16G006390Cucurbita maxima (Rimu)cmameB301
MELO3C016410CmoCh16G006960Cucurbita moschata (Rifu)cmomeB294
MELO3C016410Lsi07G002320Bottle gourd (USVL1VR-Ls)lsimeB454
MELO3C016410Cp4.1LG14g01770Cucurbita pepo (Zucchini)cpemeB196
MELO3C016410Cp4.1LG01g07080Cucurbita pepo (Zucchini)cpemeB424
MELO3C016410CsGy4G005150Cucumber (Gy14) v2cgybmeB269
MELO3C016410Carg05758Silver-seed gourdcarmeB0992
MELO3C016410Carg14167Silver-seed gourdcarmeB0924
MELO3C016410CsaV3_4G005380Cucumber (Chinese Long) v3cucmeB315
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C016410Watermelon (97103) v2mewmbB454
MELO3C016410Melon (DHL92) v3.5.1memeB155
MELO3C016410Cucumber (Gy14) v1cgymeB025
MELO3C016410Cucurbita maxima (Rimu)cmameB608
MELO3C016410Cucurbita maxima (Rimu)cmameB694
MELO3C016410Cucurbita maxima (Rimu)cmameB796
MELO3C016410Cucurbita maxima (Rimu)cmameB797
MELO3C016410Cucurbita moschata (Rifu)cmomeB597
MELO3C016410Cucurbita moschata (Rifu)cmomeB686
MELO3C016410Wild cucumber (PI 183967)cpimeB504
MELO3C016410Cucumber (Chinese Long) v2cumeB500
MELO3C016410Watermelon (Charleston Gray)mewcgB466
MELO3C016410Watermelon (97103) v1mewmB531
MELO3C016410Bottle gourd (USVL1VR-Ls)lsimeB148
MELO3C016410Cucumber (Gy14) v2cgybmeB442
MELO3C016410Silver-seed gourdcarmeB0412
MELO3C016410Cucumber (Chinese Long) v3cucmeB514