ClCG07G008790 (gene) Watermelon (Charleston Gray)

Overview
NameClCG07G008790
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionTransmembrane protein
LocationCG_Chr07 : 23147898 .. 23149488 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATATCAATATCAATTTTAAAGCCCCCCTGGCCTCGGTCTCAACTGTGGAAACCGATTAAATTGATCGGTGATCGGTAGCTGCTTCAGACGATCTTTCTTCACCAAAATTGTTCCAATTGGTATCAAGTTTCCTTTCACACTTTTCCCTATAGATCTGTTTGTTCTTTCTTCAAATTCTTCGCGTAGCTTGCTTGTTTTACCTGCTTGATTTTTTTGTTCTATGCACTTGGTGTTTGGTTATCCCTAAAGTTGAGAAGATTTAGGAGCTTCAATTTTGTTTTCTGTAATTGAGAAGGAATATACGGGTATCACTGGGTGCTTGCACTTCCAGCCTATGGCTGGTTCTTTGATAAATACTGGAAGTTAATGTTCAACTTTGGGCGATTTTTGTTCCATGAAATGGTTTGATGAACTTCAAACATTGTTTTCCCTTTTCTTTCTTCTTTCTTCTTTCTTCCTTCGCACGGATTCGTTGAACAGCCTAATTTCATTCTTCAAAATAGTTTAAGCATCTGTCTAGACTTTCTATTACATGCTCGCTTTCTGCGGTCATCCCCCCAAAAAGGAAATAGGGGTTTGGTGAGATTATAAAATTGACGGAAGGAAATTGGGATTGTTTAAGTTTAGGTCAATTTTTCCTTGAAGCTCTGTTAAGTTGAGGGCATTCATTTCATTTCAGGCAGCATTTTATGAGTTTGAAAATGAAATCAAGTAACGACCCTGAGAATCAGCTCATAATCGAAGGAAATATCTCTCAGAATATGAAGATTGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCGTGGCTCATTCCTTTCATTGGTCACATTGGTATTGGCAGAGAGGATGGAGTAATCTTGGACTTTGCTGGCCCTAATTTTGTGTGTGTTGACAACTTCACATTTGGAGCAGTCGCACGGTATCTTCAAATCAACAGAGATAAGGTACAAATCAATTTCCACAATTGAACTAAAGATCAATCTTTCAACAATCATCTTTCCCTCAATTTGGAATACCAAAATTCATAACATGGTATTGTAATCGACATGCAGTGTTGCATTTCCACTCATAGAAGTGAAGAAGAATTGAGGGAAGTTGATCATAGCACAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTTCAACATCGATCCTACAATCTCTTGACTTGCAATTGTCATTCCTTTGTGGCTAATAATCTGAACAGACTTGAGTTTCGAACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTCAAGGGTCGGTGGGTCAGTAAAGGAGCTTTTATCCGGACGTTCTTACCATTTGTTGTGGTATTCAGTATTGGACTCGCACTGGGGGGTACTACGTTCCTTACCTTCTTGGCATTCTTCACTTTCTTCCTGGTTGGTTGGTTCATTCTTGGTACTTACGTCTTCAAAAATTTGGTTCAGTTGTAATGTTTCTACATTTTTTACGCATTGGATTCTGTGAGTTGAATGAAGGTAAATTGCTTTTCTTCGTTGTATGTTTCCAAATCTTTGTTATTGTGCCGTGCAG

mRNA sequence

TATATCAATATCAATTTTAAAGCCCCCCTGGCCTCGGTCTCAACTGTGGAAACCGATTAAATTGATCGGTGATCGGTAGCTGCTTCAGACGATCTTTCTTCACCAAAATTGTTCCAATTGGCAGCATTTTATGAGTTTGAAAATGAAATCAAGTAACGACCCTGAGAATCAGCTCATAATCGAAGGAAATATCTCTCAGAATATGAAGATTGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCGTGGCTCATTCCTTTCATTGGTCACATTGGTATTGGCAGAGAGGATGGAGTAATCTTGGACTTTGCTGGCCCTAATTTTGTGTGTGTTGACAACTTCACATTTGGAGCAGTCGCACGGTATCTTCAAATCAACAGAGATAAGTGTTGCATTTCCACTCATAGAAGTGAAGAAGAATTGAGGGAAGTTGATCATAGCACAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTTCAACATCGATCCTACAATCTCTTGACTTGCAATTGTCATTCCTTTGTGGCTAATAATCTGAACAGACTTGAGTTTCGAACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTCAAGGGTCGGTGGGTCAGTAAAGGAGCTTTTATCCGGACGTTCTTACCATTTGTTGTGGTATTCAGTATTGGACTCGCACTGGGGGGTACTACGTTCCTTACCTTCTTGGCATTCTTCACTTTCTTCCTGGTTGGTTGGTTCATTCTTGGTACTTACGTCTTCAAAAATTTGGTTCAGTTGTAATGTTTCTACATTTTTTACGCATTGGATTCTGTGAGTTGAATGAAGGTAAATTGCTTTTCTTCGTTGTATGTTTCCAAATCTTTGTTATTGTGCCGTGCAG

Coding sequence (CDS)

ATGAGTTTGAAAATGAAATCAAGTAACGACCCTGAGAATCAGCTCATAATCGAAGGAAATATCTCTCAGAATATGAAGATTGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCGTGGCTCATTCCTTTCATTGGTCACATTGGTATTGGCAGAGAGGATGGAGTAATCTTGGACTTTGCTGGCCCTAATTTTGTGTGTGTTGACAACTTCACATTTGGAGCAGTCGCACGGTATCTTCAAATCAACAGAGATAAGTGTTGCATTTCCACTCATAGAAGTGAAGAAGAATTGAGGGAAGTTGATCATAGCACAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTTCAACATCGATCCTACAATCTCTTGACTTGCAATTGTCATTCCTTTGTGGCTAATAATCTGAACAGACTTGAGTTTCGAACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTCAAGGGTCGGTGGGTCAGTAAAGGAGCTTTTATCCGGACGTTCTTACCATTTGTTGTGGTATTCAGTATTGGACTCGCACTGGGGGGTACTACGTTCCTTACCTTCTTGGCATTCTTCACTTTCTTCCTGGTTGGTTGGTTCATTCTTGGTACTTACGTCTTCAAAAATTTGGTTCAGTTGTAA

Protein sequence

MSLKMKSSNDPENQLIIEGNISQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISTHRSEEELREVDHSTEISTWDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLEFRTGGWNVVNLAALIFLKGRWVSKGAFIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Homology
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BLAST of ClCG07G008790 vs. Swiss-Prot
Match: RTH_ARATH (Protein RTE1-HOMOLOG OS=Arabidopsis thaliana GN=RTH PE=2 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 5.3e-79
Identity = 140/235 (59.57%), Postives = 174/235 (74.04%), Query Frame = 1 

Query: 6   KSSNDPENQLIIEGNISQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVI 65
           +++ D E++++I   +S  MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVARYLQINRDKCCISTHRSEE----------ELREVDHSTEI 125
           LDFAGPNFVCVDNF FGAV+RY+QIN++   + + RS            E  E  H  E 
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKE- 122

Query: 126 STWDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLEFRTGGWNVVNLAALIFLKGRWV 185
            TWDDALR+STQE+QH SYN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV
Sbjct: 123 PTWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWV 182

Query: 186 SKGAFIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           +K A +++ LP ++V++IG+ LGG TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 NKTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

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BLAST of ClCG07G008790 vs. Swiss-Prot
Match: RTE1_ARATH (Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana GN=RTE1 PE=1 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.4e-62
Identity = 113/210 (53.81%), Postives = 149/210 (70.95%), Query Frame = 1 

Query: 26  KIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVA 85
           +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ VD+F FG  A
Sbjct: 43  EIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPA 102

Query: 86  RYLQINRDKCCI----STHRSEEELREVDHSTEISTWDDALRRSTQEFQHRSYNLLTCNC 145
           RYLQ++R KCC+      H  +   +  D  T   TWD+AL  ST+ F+H++YN+ TCNC
Sbjct: 103 RYLQLDRTKCCLPPNMGGHTCKYGFKHTDFGT-ARTWDNALSSSTRSFEHKTYNIFTCNC 162

Query: 146 HSFVANNLNRLEFRTGG---WNVVNLAALIFLKGRWVSKGAFIRTFLPFVVVFSIGLALG 205
           HSFVAN LNRL +  GG   WN+VN+A L+ +KG+W++  + +R+FLP  VV S+G+ L 
Sbjct: 163 HSFVANCLNRLCY--GGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLV 222

Query: 206 GTTFLTFLAFFTFFLVGWFILGTYVFKNLV 229
           G  FL  L+ F+  L  WFI+ TY FKN++
Sbjct: 223 GWPFLIGLSSFSLLLFAWFIIATYCFKNII 249

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BLAST of ClCG07G008790 vs. Swiss-Prot
Match: TM222_HUMAN (Transmembrane protein 222 OS=Homo sapiens GN=TMEM222 PE=1 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 4.4e-33
Identity = 70/177 (39.55%), Postives = 104/177 (58.76%), Query Frame = 1 

Query: 22  SQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTF 81
           S  + +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  F
Sbjct: 40  SGGVAMDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAF 99

Query: 82  GAVARYLQINRDKCCISTHRSEEELREVDHSTEISTWDDALRRSTQEFQHRSYNLLTCNC 141
           G  A+Y +++  +                +++  + WD A+  +++E++HR +NL   NC
Sbjct: 100 GKPAKYWKLDPAQV---------------YASGPNAWDTAVHDASEEYKHRMHNLCCDNC 159

Query: 142 HSFVANNLNRLEFRTG-GWNVVNLAALIFLKGRWVSKGAFIRTFLPFVVVFSIGLAL 198
           HS VA  LN + +     WN+V L     L G++VS GAF++T+LPF+++  I L +
Sbjct: 160 HSHVALALNLMRYNNSTNWNMVTLCFFCLLYGKYVSVGAFVKTWLPFILLLGIILTV 201

[Close]
BLAST of ClCG07G008790 vs. Swiss-Prot
Match: TM222_MOUSE (Transmembrane protein 222 OS=Mus musculus GN=Tmem222 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-32
Identity = 69/177 (38.98%), Postives = 104/177 (58.76%), Query Frame = 1 

Query: 22  SQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTF 81
           S  + +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  F
Sbjct: 40  SGGVVMDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSAGVIRDFAGPYFVSEDNMAF 99

Query: 82  GAVARYLQINRDKCCISTHRSEEELREVDHSTEISTWDDALRRSTQEFQHRSYNLLTCNC 141
           G  A++ +++  +                +++  + WD A+  +++E++HR +NL   NC
Sbjct: 100 GKPAKFWKLDPGQV---------------YASGPNAWDTAVHDASEEYKHRMHNLCCDNC 159

Query: 142 HSFVANNLNRLEFRTG-GWNVVNLAALIFLKGRWVSKGAFIRTFLPFVVVFSIGLAL 198
           HS VA  LN + +     WN+V L     + G++VS GAF++T+LPFV++  I L +
Sbjct: 160 HSHVALALNLMRYNNSTNWNMVTLCCFCLIYGKYVSVGAFVKTWLPFVLLLGIILTV 201

[Close]
BLAST of ClCG07G008790 vs. TrEMBL
Match: A0A0A0KXZ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G044470 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 2.0e-125
Identity = 218/230 (94.78%), Postives = 224/230 (97.39%), Query Frame = 1 

Query: 1   MSLKMKSSNDPENQLIIEGNISQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 60
           MSL+M+SS DPENQL+IEGNI+QNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISTHRSEEELREVDHSTEISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCIS HRSEEELREVDHS EISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLEFRTGGWNVVNLAALIFLKGRWVSKGAF 180
           ALRRSTQEFQHR+YNLLTCNCHSFVANNLNRL FRTGGWNVVNLAALIFLKGRWVSKGA 
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           IRTFLPFVVVFSIGLALG TTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]
BLAST of ClCG07G008790 vs. TrEMBL
Match: F6GWR6_VITVI (C-repeat binding transcription factor OS=Vitis vinifera GN=CBF2 PE=2 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 1.8e-94
Identity = 166/231 (71.86%), Postives = 191/231 (82.68%), Query Frame = 1 

Query: 5   MKSSNDPENQLIIEGNISQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 64
           M S+ DPE+ ++IE ++SQ M+IDP RARFPCCIVWTPLPVISWLIPF+GHIGI REDGV
Sbjct: 1   MDSNADPEDHMMIERSVSQMMQIDPRRARFPCCIVWTPLPVISWLIPFVGHIGICREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISTH-----RSEEELREVDHSTEISTWD 124
           ILDFAGPNFVCVDNF FGAV RY+QI+++KCCIS H     R E    + +   +I TWD
Sbjct: 61  ILDFAGPNFVCVDNFAFGAVTRYIQISKEKCCISPHHPAPYRRENGRGQDETEIDILTWD 120

Query: 125 DALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLEFRTGGWNVVNLAALIFLKGRWVSKGA 184
           DALR+STQEFQH+SYNL TCNCHSFVANNLNRL F  GGWNVVNLAALIFLKGRWVS  +
Sbjct: 121 DALRKSTQEFQHQSYNLFTCNCHSFVANNLNRLGFYDGGWNVVNLAALIFLKGRWVSTTS 180

Query: 185 FIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
            I++FLPF +V ++GL  GG TFLTFLAFFTF LVGWF+LGTY FKNL+ L
Sbjct: 181 MIKSFLPFAIVSALGLFFGGLTFLTFLAFFTFLLVGWFLLGTYCFKNLIHL 231

[Close]
BLAST of ClCG07G008790 vs. TrEMBL
Match: A0A103Y5G2_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_018829 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.5e-93
Identity = 158/231 (68.40%), Postives = 192/231 (83.12%), Query Frame = 1 

Query: 5   MKSSNDPENQLIIEGNISQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 64
           M+S  +P + ++IE  + QNM+IDP RARFPCCIVWTPLPVISWL+PF+GHIGIGREDGV
Sbjct: 1   MESDTEPNHSMMIEHTVPQNMQIDPSRARFPCCIVWTPLPVISWLLPFVGHIGIGREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISTH-----RSEEELREVDHSTEISTWD 124
           ILDFAGPNFVCVDNFTFGAVARY+QI+++KC I+ H     RSEEE R V+      TWD
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYVQISKEKCSITPHPSSMYRSEEEYRLVESGRNQHTWD 120

Query: 125 DALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLEFRTGGWNVVNLAALIFLKGRWVSKGA 184
           DAL++STQE+QHR+YN+LTCNCHSFVA+NLNRLEF+ GGWNVVN+AALI LKG+WV+  +
Sbjct: 121 DALKKSTQEYQHRTYNILTCNCHSFVAHNLNRLEFQNGGWNVVNVAALILLKGQWVNTTS 180

Query: 185 FIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
            IR ++PFV++F +G+  GG  FLTFLAFF   LVGWFILGTY FKN ++L
Sbjct: 181 MIRAYVPFVMIFLVGITFGGANFLTFLAFFAILLVGWFILGTYCFKNFIKL 231

[Close]
BLAST of ClCG07G008790 vs. TrEMBL
Match: W9SD51_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026815 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 1.0e-92
Identity = 162/230 (70.43%), Postives = 189/230 (82.17%), Query Frame = 1 

Query: 5   MKSSNDPENQLIIEGNISQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 64
           M S  D ENQL+ EG+ S N +IDP+RARFPCCIVWTPLPVISWL+PF+GHIGI REDGV
Sbjct: 1   MDSDADTENQLMAEGSSSPNFQIDPKRARFPCCIVWTPLPVISWLVPFVGHIGICREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCI----STHRSEEELREVDHSTEISTWDD 124
           ILDFAGPNFVCVDNF FG VARYL I+  +C      S H+SE++ R+     EISTWDD
Sbjct: 61  ILDFAGPNFVCVDNFAFGVVARYLHISLHECYALPLPSLHKSEDQHRQDQPEREISTWDD 120

Query: 125 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLEFRTGGWNVVNLAALIFLKGRWVSKGAF 184
           ALR+ TQ FQHR+Y+L TCNCHSFVANNLNRL+F  GGWNVVNLAALIF+KG+WVSK + 
Sbjct: 121 ALRKGTQVFQHRAYSLFTCNCHSFVANNLNRLQFSNGGWNVVNLAALIFIKGKWVSKASM 180

Query: 185 IRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           +R+FLPF+VVFS+G ALGG++FL FLA F  FLVGWF+ GTY FKNL+QL
Sbjct: 181 VRSFLPFLVVFSLGFALGGSSFLIFLALFIVFLVGWFLFGTYCFKNLIQL 230

[Close]
BLAST of ClCG07G008790 vs. TrEMBL
Match: A0A061DFF6_THECC (RTE1 isoform 1 OS=Theobroma cacao GN=TCM_000278 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 1.0e-92
Identity = 166/233 (71.24%), Postives = 193/233 (82.83%), Query Frame = 1 

Query: 5   MKSSNDPENQLIIEGNIS--QNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGRED 64
           M+   D ++QL++EG ++  ++M+IDP R RFPCCIVWTPLPV+SWL+PFIGH+GI RED
Sbjct: 1   MEEHVDSDHQLMVEGGLTFPRSMQIDPRRERFPCCIVWTPLPVLSWLVPFIGHVGICRED 60

Query: 65  GVILDFAGPNFVCVDNFTFGAVARYLQINRDK-CCISTHRS----EEELREVDHSTEIST 124
           GVILDFAGPNFVCVDNFTFGAVARY+QIN DK CCIS H S    E+E +  D   E  T
Sbjct: 61  GVILDFAGPNFVCVDNFTFGAVARYIQINIDKECCISPHPSAFKGEQEYQHDDPRRERLT 120

Query: 125 WDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLEFRTGGWNVVNLAALIFLKGRWVSK 184
           WDD LR+STQEFQHRSY+L TCNCHSFVANNLNRL FR+GGWNVVNLA LIFLKG WVSK
Sbjct: 121 WDDTLRKSTQEFQHRSYSLFTCNCHSFVANNLNRLGFRSGGWNVVNLAVLIFLKGCWVSK 180

Query: 185 GAFIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
            AF+R+FLPFV+V  +GLA GGTT+LTFLA F F LVGWF+LGTY FK+L+ L
Sbjct: 181 TAFLRSFLPFVIVSGLGLAFGGTTYLTFLALFAFLLVGWFLLGTYCFKSLIHL 233

[Close]
BLAST of ClCG07G008790 vs. TAIR10
Match: AT3G51040.1 (AT3G51040.1 RTE1-homolog)

HSP 1 Score: 295.4 bits (755), Expect = 3.0e-80
Identity = 140/235 (59.57%), Postives = 174/235 (74.04%), Query Frame = 1 

Query: 6   KSSNDPENQLIIEGNISQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVI 65
           +++ D E++++I   +S  MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVARYLQINRDKCCISTHRSEE----------ELREVDHSTEI 125
           LDFAGPNFVCVDNF FGAV+RY+QIN++   + + RS            E  E  H  E 
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKE- 122

Query: 126 STWDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLEFRTGGWNVVNLAALIFLKGRWV 185
            TWDDALR+STQE+QH SYN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV
Sbjct: 123 PTWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWV 182

Query: 186 SKGAFIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           +K A +++ LP ++V++IG+ LGG TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 NKTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

[Close]
BLAST of ClCG07G008790 vs. TAIR10
Match: AT2G26070.1 (AT2G26070.1 Protein of unknown function (DUF778))

HSP 1 Score: 239.6 bits (610), Expect = 1.9e-63
Identity = 113/210 (53.81%), Postives = 149/210 (70.95%), Query Frame = 1 

Query: 26  KIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVA 85
           +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ VD+F FG  A
Sbjct: 43  EIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPA 102

Query: 86  RYLQINRDKCCI----STHRSEEELREVDHSTEISTWDDALRRSTQEFQHRSYNLLTCNC 145
           RYLQ++R KCC+      H  +   +  D  T   TWD+AL  ST+ F+H++YN+ TCNC
Sbjct: 103 RYLQLDRTKCCLPPNMGGHTCKYGFKHTDFGT-ARTWDNALSSSTRSFEHKTYNIFTCNC 162

Query: 146 HSFVANNLNRLEFRTGG---WNVVNLAALIFLKGRWVSKGAFIRTFLPFVVVFSIGLALG 205
           HSFVAN LNRL +  GG   WN+VN+A L+ +KG+W++  + +R+FLP  VV S+G+ L 
Sbjct: 163 HSFVANCLNRLCY--GGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLV 222

Query: 206 GTTFLTFLAFFTFFLVGWFILGTYVFKNLV 229
           G  FL  L+ F+  L  WFI+ TY FKN++
Sbjct: 223 GWPFLIGLSSFSLLLFAWFIIATYCFKNII 249

[Close]
BLAST of ClCG07G008790 vs. NCBI nr
Match: gi|449457506|ref|XP_004146489.1| (PREDICTED: protein RTE1-HOMOLOG [Cucumis sativus])

HSP 1 Score: 456.4 bits (1173), Expect = 2.9e-125
Identity = 218/230 (94.78%), Postives = 224/230 (97.39%), Query Frame = 1 

Query: 1   MSLKMKSSNDPENQLIIEGNISQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 60
           MSL+M+SS DPENQL+IEGNI+QNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISTHRSEEELREVDHSTEISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCIS HRSEEELREVDHS EISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLEFRTGGWNVVNLAALIFLKGRWVSKGAF 180
           ALRRSTQEFQHR+YNLLTCNCHSFVANNLNRL FRTGGWNVVNLAALIFLKGRWVSKGA 
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           IRTFLPFVVVFSIGLALG TTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]
BLAST of ClCG07G008790 vs. NCBI nr
Match: gi|659102422|ref|XP_008452120.1| (PREDICTED: protein RTE1-HOMOLOG [Cucumis melo])

HSP 1 Score: 451.4 bits (1160), Expect = 9.2e-124
Identity = 216/230 (93.91%), Postives = 223/230 (96.96%), Query Frame = 1 

Query: 1   MSLKMKSSNDPENQLIIEGNISQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 60
           MSL+M+S+ DPENQL+IEGNI+Q+MKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISTHRSEEELREVDHSTEISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCIS HRSEEELREVD S EISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDD 120

Query: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLEFRTGGWNVVNLAALIFLKGRWVSKGAF 180
           ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRL FRTGGWNVVNLAALIFLKGRWVSKGA 
Sbjct: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           IRTFLPFVVVFSIGLALG TTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]
BLAST of ClCG07G008790 vs. NCBI nr
Match: gi|225431245|ref|XP_002274106.1| (PREDICTED: protein RTE1-HOMOLOG isoform X1 [Vitis vinifera])

HSP 1 Score: 353.6 bits (906), Expect = 2.6e-94
Identity = 166/231 (71.86%), Postives = 191/231 (82.68%), Query Frame = 1 

Query: 5   MKSSNDPENQLIIEGNISQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 64
           M S+ DPE+ ++IE ++SQ M+IDP RARFPCCIVWTPLPVISWLIPF+GHIGI REDGV
Sbjct: 1   MDSNADPEDHMMIERSVSQMMQIDPRRARFPCCIVWTPLPVISWLIPFVGHIGICREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISTH-----RSEEELREVDHSTEISTWD 124
           ILDFAGPNFVCVDNF FGAV RY+QI+++KCCIS H     R E    + +   +I TWD
Sbjct: 61  ILDFAGPNFVCVDNFAFGAVTRYIQISKEKCCISPHHPAPYRRENGRGQDETEIDILTWD 120

Query: 125 DALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLEFRTGGWNVVNLAALIFLKGRWVSKGA 184
           DALR+STQEFQH+SYNL TCNCHSFVANNLNRL F  GGWNVVNLAALIFLKGRWVS  +
Sbjct: 121 DALRKSTQEFQHQSYNLFTCNCHSFVANNLNRLGFYDGGWNVVNLAALIFLKGRWVSTTS 180

Query: 185 FIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
            I++FLPF +V ++GL  GG TFLTFLAFFTF LVGWF+LGTY FKNL+ L
Sbjct: 181 MIKSFLPFAIVSALGLFFGGLTFLTFLAFFTFLLVGWFLLGTYCFKNLIHL 231

[Close]
BLAST of ClCG07G008790 vs. NCBI nr
Match: gi|976917406|gb|KVI02869.1| (Protein of unknown function DUF778 [Cynara cardunculus var. scolymus])

HSP 1 Score: 350.5 bits (898), Expect = 2.2e-93
Identity = 158/231 (68.40%), Postives = 192/231 (83.12%), Query Frame = 1 

Query: 5   MKSSNDPENQLIIEGNISQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 64
           M+S  +P + ++IE  + QNM+IDP RARFPCCIVWTPLPVISWL+PF+GHIGIGREDGV
Sbjct: 1   MESDTEPNHSMMIEHTVPQNMQIDPSRARFPCCIVWTPLPVISWLLPFVGHIGIGREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISTH-----RSEEELREVDHSTEISTWD 124
           ILDFAGPNFVCVDNFTFGAVARY+QI+++KC I+ H     RSEEE R V+      TWD
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYVQISKEKCSITPHPSSMYRSEEEYRLVESGRNQHTWD 120

Query: 125 DALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLEFRTGGWNVVNLAALIFLKGRWVSKGA 184
           DAL++STQE+QHR+YN+LTCNCHSFVA+NLNRLEF+ GGWNVVN+AALI LKG+WV+  +
Sbjct: 121 DALKKSTQEYQHRTYNILTCNCHSFVAHNLNRLEFQNGGWNVVNVAALILLKGQWVNTTS 180

Query: 185 FIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
            IR ++PFV++F +G+  GG  FLTFLAFF   LVGWFILGTY FKN ++L
Sbjct: 181 MIRAYVPFVMIFLVGITFGGANFLTFLAFFAILLVGWFILGTYCFKNFIKL 231

[Close]
BLAST of ClCG07G008790 vs. NCBI nr
Match: gi|657948444|ref|XP_008337789.1| (PREDICTED: protein RTE1-HOMOLOG-like isoform X1 [Malus domestica])

HSP 1 Score: 348.2 bits (892), Expect = 1.1e-92
Identity = 157/232 (67.67%), Postives = 197/232 (84.91%), Query Frame = 1 

Query: 3   LKMKSSNDPENQLIIEGNISQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGRED 62
           L M++S  PE+ L I+G+ S  ++IDP+R+RFPCCIVWTPLPVISWL+PF+GHIGI RED
Sbjct: 29  LAMETSAGPEHXLRIDGSDSPTLQIDPKRSRFPCCIVWTPLPVISWLVPFVGHIGICRED 88

Query: 63  GVILDFAGPNFVCVDNFTFGAVARYLQINRDKCC----ISTHRSEEELREVDHSTEISTW 122
           GVILDFAGPNFVCVDNF+FGA  RY+QIN++KCC    +S ++SE++  E +   +I TW
Sbjct: 89  GVILDFAGPNFVCVDNFSFGAATRYIQINKEKCCAITDLSEYQSEDQYGENEPGRDIKTW 148

Query: 123 DDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLEFRTGGWNVVNLAALIFLKGRWVSKG 182
           DDAL++ TQEFQHR+YNL TCNCHSFVANNLNRL FR+GGWNVVNLAALIFLKG+WVS  
Sbjct: 149 DDALQKGTQEFQHRAYNLFTCNCHSFVANNLNRLGFRSGGWNVVNLAALIFLKGQWVSTA 208

Query: 183 AFIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           A +++ LPF+++F +G+AL G+TFLT+L FFT FLVGWF+LGTY FK+L+QL
Sbjct: 209 AVVQSLLPFLIIFCLGVALAGSTFLTYLGFFTAFLVGWFLLGTYCFKSLIQL 260

The following BLAST results are available for this feature:
BLAST of ClCG07G008790 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RTH_ARATH5.3e-7959.57Protein RTE1-HOMOLOG OS=Arabidopsis thaliana GN=RTH PE=2 SV=1[more]
RTE1_ARATH3.4e-6253.81Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana GN=RTE1 PE=1 ... [more]
TM222_HUMAN4.4e-3339.55Transmembrane protein 222 OS=Homo sapiens GN=TMEM222 PE=1 SV=2[more]
TM222_MOUSE1.3e-3238.98Transmembrane protein 222 OS=Mus musculus GN=Tmem222 PE=1 SV=1[more]
BLAST of ClCG07G008790 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXZ7_CUCSA2.0e-12594.78Uncharacterized protein OS=Cucumis sativus GN=Csa_4G044470 PE=4 SV=1[more]
F6GWR6_VITVI1.8e-9471.86C-repeat binding transcription factor OS=Vitis vinifera GN=CBF2 PE=2 SV=1[more]
A0A103Y5G2_CYNCS1.5e-9368.40Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_018829 PE=4 ... [more]
W9SD51_9ROSA1.0e-9270.43Uncharacterized protein OS=Morus notabilis GN=L484_026815 PE=4 SV=1[more]
A0A061DFF6_THECC1.0e-9271.24RTE1 isoform 1 OS=Theobroma cacao GN=TCM_000278 PE=4 SV=1[more]
BLAST of ClCG07G008790 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G51040.13.0e-8059.57 RTE1-homolog[more]
AT2G26070.11.9e-6353.81 Protein of unknown function (DUF778)[more]
BLAST of ClCG07G008790 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457506|ref|XP_004146489.1|2.9e-12594.78PREDICTED: protein RTE1-HOMOLOG [Cucumis sativus][more]
gi|659102422|ref|XP_008452120.1|9.2e-12493.91PREDICTED: protein RTE1-HOMOLOG [Cucumis melo][more]
gi|225431245|ref|XP_002274106.1|2.6e-9471.86PREDICTED: protein RTE1-HOMOLOG isoform X1 [Vitis vinifera][more]
gi|976917406|gb|KVI02869.1|2.2e-9368.40Protein of unknown function DUF778 [Cynara cardunculus var. scolymus][more]
gi|657948444|ref|XP_008337789.1|1.1e-9267.67PREDICTED: protein RTE1-HOMOLOG-like isoform X1 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008496DUF778
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG07G008790.1ClCG07G008790.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008496Protein of unknown function DUF778PANTHERPTHR20921UNCHARACTERIZEDcoord: 9..213
score: 7.5E
IPR008496Protein of unknown function DUF778PFAMPF05608DUF778coord: 100..174
score: 4.3E-20coord: 43..92
score: 5.0
NoneNo IPR availablePANTHERPTHR20921:SF1PROTEIN RTE1-HOMOLOGcoord: 9..213
score: 7.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG07G008790Csa4G044470Cucumber (Chinese Long) v2cuwcgB325
ClCG07G008790MELO3C016410Melon (DHL92) v3.5.1mewcgB484
ClCG07G008790Cla014561Watermelon (97103) v1wcgwmB364
ClCG07G008790Cla97C07G135840Watermelon (97103) v2wcgwmbB307
ClCG07G008790Bhi01G001884Wax gourdwcgwgoB560
ClCG07G008790CSPI04G05240Wild cucumber (PI 183967)cpiwcgB342
ClCG07G008790Cucsa.201110Cucumber (Gy14) v1cgywcgB372
ClCG07G008790CmaCh16G006390Cucurbita maxima (Rimu)cmawcgB301
ClCG07G008790CmoCh16G006960Cucurbita moschata (Rifu)cmowcgB294
ClCG07G008790Lsi07G002320Bottle gourd (USVL1VR-Ls)lsiwcgB413
ClCG07G008790Cp4.1LG14g01770Cucurbita pepo (Zucchini)cpewcgB210
ClCG07G008790Cp4.1LG01g07080Cucurbita pepo (Zucchini)cpewcgB412
ClCG07G008790CsGy4G005150Cucumber (Gy14) v2cgybwcgB303
ClCG07G008790MELO3C016410.2Melon (DHL92) v3.6.1medwcgB479
ClCG07G008790Carg05758Silver-seed gourdcarwcgB0999
ClCG07G008790Carg14167Silver-seed gourdcarwcgB0916
ClCG07G008790CsaV3_4G005380Cucumber (Chinese Long) v3cucwcgB344
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG07G008790Wax gourdwcgwgoB591
ClCG07G008790Watermelon (Charleston Gray)wcgwcgB107
ClCG07G008790Watermelon (Charleston Gray)wcgwcgB165
ClCG07G008790Cucumber (Gy14) v1cgywcgB029
ClCG07G008790Cucumber (Gy14) v1cgywcgB588
ClCG07G008790Cucurbita maxima (Rimu)cmawcgB599
ClCG07G008790Cucurbita maxima (Rimu)cmawcgB668
ClCG07G008790Cucurbita maxima (Rimu)cmawcgB774
ClCG07G008790Cucurbita moschata (Rifu)cmowcgB599
ClCG07G008790Cucurbita moschata (Rifu)cmowcgB670
ClCG07G008790Cucurbita moschata (Rifu)cmowcgB775
ClCG07G008790Wild cucumber (PI 183967)cpiwcgB261
ClCG07G008790Wild cucumber (PI 183967)cpiwcgB515
ClCG07G008790Cucumber (Chinese Long) v2cuwcgB489
ClCG07G008790Melon (DHL92) v3.5.1mewcgB125
ClCG07G008790Melon (DHL92) v3.5.1mewcgB543
ClCG07G008790Watermelon (97103) v1wcgwmB383
ClCG07G008790Cucurbita pepo (Zucchini)cpewcgB445
ClCG07G008790Bottle gourd (USVL1VR-Ls)lsiwcgB150
ClCG07G008790Cucumber (Gy14) v2cgybwcgB450
ClCG07G008790Melon (DHL92) v3.6.1medwcgB539
ClCG07G008790Silver-seed gourdcarwcgB0400
ClCG07G008790Cucumber (Chinese Long) v3cucwcgB167
ClCG07G008790Cucumber (Chinese Long) v3cucwcgB260
ClCG07G008790Cucumber (Chinese Long) v3cucwcgB509
ClCG07G008790Watermelon (97103) v2wcgwmbB284