Cp4.1LG01g07080 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g07080
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionProtein REVERSION-TO-ETHYLENE SENSITIVITY1
LocationCp4.1LG01 : 3966527 .. 3968082 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAAAATGTCCTTTATGCCCCTAAAGCGGATAAACTATGAGCCTCTCTCGTTTCCGCCCAATTTTTTCTCCTCTCCTTTGTTTCTTGTCAATAAAGAACAAGAAAATCCGATCCAGTCGAAATTTCTCAGATTTCAGAGCTTTTCAATTCTAAAATCTTCAAGATCTTTCAAATTTGGGCTTGTGGGCGGCGGAAGAGTCGTCGCCGGCAGTGGATACGTCTTGGTGAAGGAAGCTGGGAGGAGAGGCCGGAGAGGTAGGAAGAGGTAAAACGAGAGAACTAAAATTTCTCCGCTACTGGTGCAAACCGATGAATTTGATCGGTTATCGGTAGGTCGTTCACACGATCTTTCTTCACCAAAATTGTTCCGATAGGTAACTTCTCTGAAAATCTGTTTTGTTCTTCAATTTCTTGCAGTAGCTTGCTTGTTTTACCAGTTTGATTTTCCTGGATGTTTGGGAGTTGAACAGCCTAGTTTCGTGCTTGTTTTCTGCGATTATCTCAATAAAGATTTCAGGGGATTAGCTGAGATTATGAAATTGGGATTGTTAAGCTTAGGTTAATTTTTAGTTGAACCTCTGTCAAATTGAGGGTTTTCATTTCACTTCAGGAAGCATCTTATAACTCTGGAAATGGAATCAAGTGATGACCCTGAGAATCAAATGATGATAGAAGGAAATGTTGTTCAGAAAATGAAAATTGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCCTGGCTCATTCCTTTCATTGGTCACATTGGTATTGGCAGAGAGGATGGAGTGATCTTGGACTTTGCAGGCCCCAATTTTGTTTGCGTGGACAACTTCACATTTGGAGCAGTCGCACGGTATCTTCAAATCAACACAGACAAGGTAACTTTCGATAGGAAACTCTTTCCCTTTTGAAGTTCTTTCGCTCACACGACTGATTTGATTGTTATCGGCTTCCAGTGCTGCATCTCAACTCATAGAAGTGAGGATGAATTCAGGGAAGTTGATAATGGTAGAGAAATATCAACATGGGATGATGCACTGCGGAGGAGCACTCAAGAGTTCCAACACCGAGCCTACAATCTCTTAACTTGCAATTGTCATTCCTTTGTTGCTAACAATCTGAACAGGCTTGGGTTTGTCACAGGTGGATGGAATGTGGTAAACCTTGCAGCTCTGATGTTTCTCAAGGGTCGGTGGGTCAGTAAAGGAGCTGTGATCCGGACGTTCTTACCATTTGGTGTGGTATTCAGTATAGGAGTTGCAATGGGGGGTACTACATTCCTAACTTTCTTGGCATTCTTCACTTTCTTCCTGGTTGGTTGGTTCGTTCTTGGTACTTATGTCTTCAAAAATTTGGTTCAGTTGTAATGTTTCTACAGTTTTTACAAATTGAATTCTGTGATTTGAACGGAGGTAGATTCATTTTTCACAAAAGTTCTAATGTGTCTGGGCGATGTTTCTACACTATTATAAAGAATGTTTTGTTCTCTTCCCCGACCAATGTGTTATCTTATCGAAGATTTATGCAA

mRNA sequence

ATGGAACAAGAAAATCCGATCCAGTCGAAATTTCTCAGATTTCAGAGCTTTTCAATTCTAAAATCTTCAAGATCTTTCAAATTTGGGCTTGTGGGCGGCGGAAGAGTCGTCGCCGGCAGTGGATACGTCTTGGTGAAGGAAGCTGGGAGGAGAGGCCGGAGAGGTAGGAAGAGGAAGCATCTTATAACTCTGGAAATGGAATCAAGTGATGACCCTGAGAATCAAATGATGATAGAAGGAAATGTTGTTCAGAAAATGAAAATTGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCCTGGCTCATTCCTTTCATTGGTCACATTGGTATTGGCAGAGAGGATGGAGTGATCTTGGACTTTGCAGGCCCCAATTTTGTTTGCGTGGACAACTTCACATTTGGAGCAGTCGCACGGTATCTTCAAATCAACACAGACAAGTGCTGCATCTCAACTCATAGAAGTGAGGATGAATTCAGGGAAGTTGATAATGGTAGAGAAATATCAACATGGGATGATGCACTGCGGAGGAGCACTCAAGAGTTCCAACACCGAGCCTACAATCTCTTAACTTGCAATTGTCATTCCTTTGTTGCTAACAATCTGAACAGGCTTGGGTTTGTCACAGGTGGATGGAATGTGGTAAACCTTGCAGCTCTGATGTTTCTCAAGGGTCGGTGGGTCAGTAAAGGAGCTGTGATCCGGACGTTCTTACCATTTGGTGTGGTATTCAGTATAGGAGTTGCAATGGGGGGTACTACATTCCTAACTTTCTTGGCATTCTTCACTTTCTTCCTGGTTGGTTGGTTCGTTCTTGGTACTTATGTCTTCAAAAATTTGGTTCAGTTGTAATGTTTCTACAGTTTTTACAAATTGAATTCTGTGATTTGAACGGAGGTAGATTCATTTTTCACAAAAGTTCTAATGTGTCTGGGCGATGTTTCTACACTATTATAAAGAATGTTTTGTTCTCTTCCCCGACCAATGTGTTATCTTATCGAAGATTTATGCAA

Coding sequence (CDS)

ATGGAACAAGAAAATCCGATCCAGTCGAAATTTCTCAGATTTCAGAGCTTTTCAATTCTAAAATCTTCAAGATCTTTCAAATTTGGGCTTGTGGGCGGCGGAAGAGTCGTCGCCGGCAGTGGATACGTCTTGGTGAAGGAAGCTGGGAGGAGAGGCCGGAGAGGTAGGAAGAGGAAGCATCTTATAACTCTGGAAATGGAATCAAGTGATGACCCTGAGAATCAAATGATGATAGAAGGAAATGTTGTTCAGAAAATGAAAATTGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCCTGGCTCATTCCTTTCATTGGTCACATTGGTATTGGCAGAGAGGATGGAGTGATCTTGGACTTTGCAGGCCCCAATTTTGTTTGCGTGGACAACTTCACATTTGGAGCAGTCGCACGGTATCTTCAAATCAACACAGACAAGTGCTGCATCTCAACTCATAGAAGTGAGGATGAATTCAGGGAAGTTGATAATGGTAGAGAAATATCAACATGGGATGATGCACTGCGGAGGAGCACTCAAGAGTTCCAACACCGAGCCTACAATCTCTTAACTTGCAATTGTCATTCCTTTGTTGCTAACAATCTGAACAGGCTTGGGTTTGTCACAGGTGGATGGAATGTGGTAAACCTTGCAGCTCTGATGTTTCTCAAGGGTCGGTGGGTCAGTAAAGGAGCTGTGATCCGGACGTTCTTACCATTTGGTGTGGTATTCAGTATAGGAGTTGCAATGGGGGGTACTACATTCCTAACTTTCTTGGCATTCTTCACTTTCTTCCTGGTTGGTTGGTTCGTTCTTGGTACTTATGTCTTCAAAAATTTGGTTCAGTTGTAA

Protein sequence

MEQENPIQSKFLRFQSFSILKSSRSFKFGLVGGGRVVAGSGYVLVKEAGRRGRRGRKRKHLITLEMESSDDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTFLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL
Homology
[Close]
BLAST of Cp4.1LG01g07080 vs. Swiss-Prot
Match: RTH_ARATH (Protein RTE1-HOMOLOG OS=Arabidopsis thaliana GN=RTH PE=2 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 7.6e-75
Identity = 137/234 (58.55%), Postives = 174/234 (74.36%), Query Frame = 1 

Query: 67  ESSDDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVI 126
           E++ D E++MMI   +   MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 127 LDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEF---------REVDNGREIS 186
           LDFAGPNFVCVDNF FGAV+RY+QIN +   + + RS             +E D+  +  
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKEP 122

Query: 187 TWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVS 246
           TWDDALR+STQE+QH +YN+LTCNCHSFVANNLNRL   +GGWNVVNLA L+  KGRWV+
Sbjct: 123 TWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWVN 182

Query: 247 KGAVIRTFLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 292
           K A++++ LP  +V++IG+ +GG TF+   +     L GWF++GTY FK L+QL
Sbjct: 183 KTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

[Close]
BLAST of Cp4.1LG01g07080 vs. Swiss-Prot
Match: RTE1_ARATH (Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana GN=RTE1 PE=1 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 6.9e-60
Identity = 113/210 (53.81%), Postives = 151/210 (71.90%), Query Frame = 1 

Query: 87  KIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVA 146
           +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ VD+F FG  A
Sbjct: 43  EIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPA 102

Query: 147 RYLQINTDKCCI----STHRSEDEFREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNC 206
           RYLQ++  KCC+      H  +  F+  D G    TWD+AL  ST+ F+H+ YN+ TCNC
Sbjct: 103 RYLQLDRTKCCLPPNMGGHTCKYGFKHTDFG-TARTWDNALSSSTRSFEHKTYNIFTCNC 162

Query: 207 HSFVANNLNRLGFVTGG---WNVVNLAALMFLKGRWVSKGAVIRTFLPFGVVFSIGVAMG 266
           HSFVAN LNRL +  GG   WN+VN+A L+ +KG+W++  +V+R+FLP  VV S+GV + 
Sbjct: 163 HSFVANCLNRLCY--GGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLV 222

Query: 267 GTTFLTFLAFFTFFLVGWFVLGTYVFKNLV 290
           G  FL  L+ F+  L  WF++ TY FKN++
Sbjct: 223 GWPFLIGLSSFSLLLFAWFIIATYCFKNII 249

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BLAST of Cp4.1LG01g07080 vs. Swiss-Prot
Match: TM222_HUMAN (Transmembrane protein 222 OS=Homo sapiens GN=TMEM222 PE=1 SV=2)

HSP 1 Score: 133.7 bits (335), Expect = 3.4e-30
Identity = 68/168 (40.48%), Postives = 98/168 (58.33%), Query Frame = 1 

Query: 88  IDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAR 147
           +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  FG  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 148 YLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVA 207
           Y +++  +   S                 + WD A+  +++E++HR +NL   NCHS VA
Sbjct: 105 YWKLDPAQVYASGP---------------NAWDTAVHDASEEYKHRMHNLCCDNCHSHVA 164

Query: 208 NNLNRLGFVTG-GWNVVNLAALMFLKGRWVSKGAVIRTFLPFGVVFSI 255
             LN + +     WN+V L     L G++VS GA ++T+LPF ++  I
Sbjct: 165 LALNLMRYNNSTNWNMVTLCFFCLLYGKYVSVGAFVKTWLPFILLLGI 197

[Close]
BLAST of Cp4.1LG01g07080 vs. Swiss-Prot
Match: TM222_MOUSE (Transmembrane protein 222 OS=Mus musculus GN=Tmem222 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.5e-30
Identity = 66/168 (39.29%), Postives = 98/168 (58.33%), Query Frame = 1 

Query: 88  IDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAR 147
           +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  FG  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSAGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 148 YLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVA 207
           + +++  +   S                 + WD A+  +++E++HR +NL   NCHS VA
Sbjct: 105 FWKLDPGQVYASGP---------------NAWDTAVHDASEEYKHRMHNLCCDNCHSHVA 164

Query: 208 NNLNRLGFVTG-GWNVVNLAALMFLKGRWVSKGAVIRTFLPFGVVFSI 255
             LN + +     WN+V L     + G++VS GA ++T+LPF ++  I
Sbjct: 165 LALNLMRYNNSTNWNMVTLCCFCLIYGKYVSVGAFVKTWLPFVLLLGI 197

[Close]
BLAST of Cp4.1LG01g07080 vs. TrEMBL
Match: A0A0A0KXZ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G044470 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 4.6e-119
Identity = 209/230 (90.87%), Postives = 220/230 (95.65%), Query Frame = 1 

Query: 62  ITLEMESSDDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 121
           ++LEMESS DPENQ+MIEGN+ Q MKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 122 EDGVILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDD 181
           EDGVILDFAGPNFVCVDNFTFGAVARYLQIN DKCCIS HRSE+E REVD+ REISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 182 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAV 241
           ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGF TGGWNVVNLAAL+FLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 242 IRTFLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 292
           IRTFLPF VVFSIG+A+G TTFLTFLAFFTFFLVGWF+LGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]
BLAST of Cp4.1LG01g07080 vs. TrEMBL
Match: F6GWR6_VITVI (C-repeat binding transcription factor OS=Vitis vinifera GN=CBF2 PE=2 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.6e-92
Identity = 167/231 (72.29%), Postives = 192/231 (83.12%), Query Frame = 1 

Query: 66  MESSDDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 125
           M+S+ DPE+ MMIE +V Q M+IDP RARFPCCIVWTPLPVISWLIPF+GHIGI REDGV
Sbjct: 1   MDSNADPEDHMMIERSVSQMMQIDPRRARFPCCIVWTPLPVISWLIPFVGHIGICREDGV 60

Query: 126 ILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGRE-----ISTWD 185
           ILDFAGPNFVCVDNF FGAV RY+QI+ +KCCIS H      RE   G++     I TWD
Sbjct: 61  ILDFAGPNFVCVDNFAFGAVTRYIQISKEKCCISPHHPAPYRRENGRGQDETEIDILTWD 120

Query: 186 DALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGA 245
           DALR+STQEFQH++YNL TCNCHSFVANNLNRLGF  GGWNVVNLAAL+FLKGRWVS  +
Sbjct: 121 DALRKSTQEFQHQSYNLFTCNCHSFVANNLNRLGFYDGGWNVVNLAALIFLKGRWVSTTS 180

Query: 246 VIRTFLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 292
           +I++FLPF +V ++G+  GG TFLTFLAFFTF LVGWF+LGTY FKNL+ L
Sbjct: 181 MIKSFLPFAIVSALGLFFGGLTFLTFLAFFTFLLVGWFLLGTYCFKNLIHL 231

[Close]
BLAST of Cp4.1LG01g07080 vs. TrEMBL
Match: M5VRS1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010911mg PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.5e-90
Identity = 160/230 (69.57%), Postives = 193/230 (83.91%), Query Frame = 1 

Query: 66  MESSDDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 125
           ME+S  PE+ +MI+G+    ++IDP RARFPCCIVWTPLPVISWLIPFIGHIGI REDGV
Sbjct: 1   METSASPEHNLMIDGSASPTLQIDPRRARFPCCIVWTPLPVISWLIPFIGHIGICREDGV 60

Query: 126 ILDFAGPNFVCVDNFTFGAVARYLQINTDKCCI----STHRSEDEFREVDNGREISTWDD 185
           ILDFAGPNFVCVDNF FGA  RY+QI+ +KC      S  +SED++R+ + GR+I TWDD
Sbjct: 61  ILDFAGPNFVCVDNFAFGAATRYIQISKEKCHSIPNPSVCQSEDQYRQDEPGRDIMTWDD 120

Query: 186 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAV 245
           ALR+ TQEFQHR+YN+LTCNCHSFVANNLNRLGF +GGWNVVNLAAL+FLKG+WVS  ++
Sbjct: 121 ALRKGTQEFQHRSYNILTCNCHSFVANNLNRLGFCSGGWNVVNLAALIFLKGKWVSTASM 180

Query: 246 IRTFLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 292
           +R+FLPF + F +GVA  G+TFLT+L FFT FLVGWF+LGTY FK+L+ L
Sbjct: 181 VRSFLPFLIAFGLGVAFAGSTFLTYLGFFTAFLVGWFLLGTYCFKSLIHL 230

[Close]
BLAST of Cp4.1LG01g07080 vs. TrEMBL
Match: A0A103Y5G2_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_018829 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 2.6e-90
Identity = 158/231 (68.40%), Postives = 191/231 (82.68%), Query Frame = 1 

Query: 66  MESSDDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 125
           MES  +P + MMIE  V Q M+IDP RARFPCCIVWTPLPVISWL+PF+GHIGIGREDGV
Sbjct: 1   MESDTEPNHSMMIEHTVPQNMQIDPSRARFPCCIVWTPLPVISWLLPFVGHIGIGREDGV 60

Query: 126 ILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTH-----RSEDEFREVDNGREISTWD 185
           ILDFAGPNFVCVDNFTFGAVARY+QI+ +KC I+ H     RSE+E+R V++GR   TWD
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYVQISKEKCSITPHPSSMYRSEEEYRLVESGRNQHTWD 120

Query: 186 DALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGA 245
           DAL++STQE+QHR YN+LTCNCHSFVA+NLNRL F  GGWNVVN+AAL+ LKG+WV+  +
Sbjct: 121 DALKKSTQEYQHRTYNILTCNCHSFVAHNLNRLEFQNGGWNVVNVAALILLKGQWVNTTS 180

Query: 246 VIRTFLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 292
           +IR ++PF ++F +G+  GG  FLTFLAFF   LVGWF+LGTY FKN ++L
Sbjct: 181 MIRAYVPFVMIFLVGITFGGANFLTFLAFFAILLVGWFILGTYCFKNFIKL 231

[Close]
BLAST of Cp4.1LG01g07080 vs. TrEMBL
Match: W9SD51_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026815 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 6.5e-89
Identity = 161/230 (70.00%), Postives = 188/230 (81.74%), Query Frame = 1 

Query: 66  MESSDDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 125
           M+S  D ENQ+M EG+     +IDP+RARFPCCIVWTPLPVISWL+PF+GHIGI REDGV
Sbjct: 1   MDSDADTENQLMAEGSSSPNFQIDPKRARFPCCIVWTPLPVISWLVPFVGHIGICREDGV 60

Query: 126 ILDFAGPNFVCVDNFTFGAVARYLQINTDKCCI----STHRSEDEFREVDNGREISTWDD 185
           ILDFAGPNFVCVDNF FG VARYL I+  +C      S H+SED+ R+    REISTWDD
Sbjct: 61  ILDFAGPNFVCVDNFAFGVVARYLHISLHECYALPLPSLHKSEDQHRQDQPEREISTWDD 120

Query: 186 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAV 245
           ALR+ TQ FQHRAY+L TCNCHSFVANNLNRL F  GGWNVVNLAAL+F+KG+WVSK ++
Sbjct: 121 ALRKGTQVFQHRAYSLFTCNCHSFVANNLNRLQFSNGGWNVVNLAALIFIKGKWVSKASM 180

Query: 246 IRTFLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 292
           +R+FLPF VVFS+G A+GG++FL FLA F  FLVGWF+ GTY FKNL+QL
Sbjct: 181 VRSFLPFLVVFSLGFALGGSSFLIFLALFIVFLVGWFLFGTYCFKNLIQL 230

[Close]
BLAST of Cp4.1LG01g07080 vs. TAIR10
Match: AT3G51040.1 (AT3G51040.1 RTE1-homolog)

HSP 1 Score: 282.0 bits (720), Expect = 4.3e-76
Identity = 137/234 (58.55%), Postives = 174/234 (74.36%), Query Frame = 1 

Query: 67  ESSDDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVI 126
           E++ D E++MMI   +   MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 127 LDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEF---------REVDNGREIS 186
           LDFAGPNFVCVDNF FGAV+RY+QIN +   + + RS             +E D+  +  
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKEP 122

Query: 187 TWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVS 246
           TWDDALR+STQE+QH +YN+LTCNCHSFVANNLNRL   +GGWNVVNLA L+  KGRWV+
Sbjct: 123 TWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWVN 182

Query: 247 KGAVIRTFLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 292
           K A++++ LP  +V++IG+ +GG TF+   +     L GWF++GTY FK L+QL
Sbjct: 183 KTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

[Close]
BLAST of Cp4.1LG01g07080 vs. TAIR10
Match: AT2G26070.1 (AT2G26070.1 Protein of unknown function (DUF778))

HSP 1 Score: 232.3 bits (591), Expect = 3.9e-61
Identity = 113/210 (53.81%), Postives = 151/210 (71.90%), Query Frame = 1 

Query: 87  KIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVA 146
           +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ VD+F FG  A
Sbjct: 43  EIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPA 102

Query: 147 RYLQINTDKCCI----STHRSEDEFREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNC 206
           RYLQ++  KCC+      H  +  F+  D G    TWD+AL  ST+ F+H+ YN+ TCNC
Sbjct: 103 RYLQLDRTKCCLPPNMGGHTCKYGFKHTDFG-TARTWDNALSSSTRSFEHKTYNIFTCNC 162

Query: 207 HSFVANNLNRLGFVTGG---WNVVNLAALMFLKGRWVSKGAVIRTFLPFGVVFSIGVAMG 266
           HSFVAN LNRL +  GG   WN+VN+A L+ +KG+W++  +V+R+FLP  VV S+GV + 
Sbjct: 163 HSFVANCLNRLCY--GGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLV 222

Query: 267 GTTFLTFLAFFTFFLVGWFVLGTYVFKNLV 290
           G  FL  L+ F+  L  WF++ TY FKN++
Sbjct: 223 GWPFLIGLSSFSLLLFAWFIIATYCFKNII 249

[Close]
BLAST of Cp4.1LG01g07080 vs. NCBI nr
Match: gi|449457506|ref|XP_004146489.1| (PREDICTED: protein RTE1-HOMOLOG [Cucumis sativus])

HSP 1 Score: 435.6 bits (1119), Expect = 6.6e-119
Identity = 209/230 (90.87%), Postives = 220/230 (95.65%), Query Frame = 1 

Query: 62  ITLEMESSDDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 121
           ++LEMESS DPENQ+MIEGN+ Q MKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 122 EDGVILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDD 181
           EDGVILDFAGPNFVCVDNFTFGAVARYLQIN DKCCIS HRSE+E REVD+ REISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 182 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAV 241
           ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGF TGGWNVVNLAAL+FLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 242 IRTFLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 292
           IRTFLPF VVFSIG+A+G TTFLTFLAFFTFFLVGWF+LGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]
BLAST of Cp4.1LG01g07080 vs. NCBI nr
Match: gi|659102422|ref|XP_008452120.1| (PREDICTED: protein RTE1-HOMOLOG [Cucumis melo])

HSP 1 Score: 432.6 bits (1111), Expect = 5.6e-118
Identity = 207/230 (90.00%), Postives = 219/230 (95.22%), Query Frame = 1 

Query: 62  ITLEMESSDDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 121
           ++LEMES+ DPENQ+MIEGN+ Q MKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 122 EDGVILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDD 181
           EDGVILDFAGPNFVCVDNFTFGAVARYLQIN DKCCIS HRSE+E REVD  REISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDD 120

Query: 182 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAV 241
           ALRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGF TGGWNVVNLAAL+FLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 242 IRTFLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 292
           IRTFLPF VVFSIG+A+G TTFLTFLAFFTFFLVGWF+LGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]
BLAST of Cp4.1LG01g07080 vs. NCBI nr
Match: gi|225431245|ref|XP_002274106.1| (PREDICTED: protein RTE1-HOMOLOG isoform X1 [Vitis vinifera])

HSP 1 Score: 347.4 bits (890), Expect = 2.4e-92
Identity = 167/231 (72.29%), Postives = 192/231 (83.12%), Query Frame = 1 

Query: 66  MESSDDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 125
           M+S+ DPE+ MMIE +V Q M+IDP RARFPCCIVWTPLPVISWLIPF+GHIGI REDGV
Sbjct: 1   MDSNADPEDHMMIERSVSQMMQIDPRRARFPCCIVWTPLPVISWLIPFVGHIGICREDGV 60

Query: 126 ILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGRE-----ISTWD 185
           ILDFAGPNFVCVDNF FGAV RY+QI+ +KCCIS H      RE   G++     I TWD
Sbjct: 61  ILDFAGPNFVCVDNFAFGAVTRYIQISKEKCCISPHHPAPYRRENGRGQDETEIDILTWD 120

Query: 186 DALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGA 245
           DALR+STQEFQH++YNL TCNCHSFVANNLNRLGF  GGWNVVNLAAL+FLKGRWVS  +
Sbjct: 121 DALRKSTQEFQHQSYNLFTCNCHSFVANNLNRLGFYDGGWNVVNLAALIFLKGRWVSTTS 180

Query: 246 VIRTFLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 292
           +I++FLPF +V ++G+  GG TFLTFLAFFTF LVGWF+LGTY FKNL+ L
Sbjct: 181 MIKSFLPFAIVSALGLFFGGLTFLTFLAFFTFLLVGWFLLGTYCFKNLIHL 231

[Close]
BLAST of Cp4.1LG01g07080 vs. NCBI nr
Match: gi|657948446|ref|XP_008337795.1| (PREDICTED: protein RTE1-HOMOLOG-like isoform X2 [Malus domestica])

HSP 1 Score: 344.7 bits (883), Expect = 1.5e-91
Identity = 160/232 (68.97%), Postives = 198/232 (85.34%), Query Frame = 1 

Query: 64  LEMESSDDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGRED 123
           L ME+S  PE+ + I+G+    ++IDP+R+RFPCCIVWTPLPVISWL+PF+GHIGI RED
Sbjct: 28  LAMETSAGPEHXLRIDGSDSPTLQIDPKRSRFPCCIVWTPLPVISWLVPFVGHIGICRED 87

Query: 124 GVILDFAGPNFVCVDNFTFGAVARYLQINTDKCC----ISTHRSEDEFREVDNGREISTW 183
           GVILDFAGPNFVCVDNF+FGA  RY+QIN +KCC    +S ++SED++ E + GR+I TW
Sbjct: 88  GVILDFAGPNFVCVDNFSFGAATRYIQINKEKCCAITDLSEYQSEDQYGENEPGRDIKTW 147

Query: 184 DDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKG 243
           DDAL++ TQEFQHRAYNL TCNCHSFVANNLNRLGF +GGWNVVNLAAL+FLKG+WVS  
Sbjct: 148 DDALQKGTQEFQHRAYNLFTCNCHSFVANNLNRLGFRSGGWNVVNLAALIFLKGQWVSTA 207

Query: 244 AVIRTFLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 292
           AV+++ LPF ++F +GVA+ G+TFLT+L FFT FLVGWF+LGTY FK+L+QL
Sbjct: 208 AVVQSLLPFLIIFCLGVALAGSTFLTYLGFFTAFLVGWFLLGTYCFKSLIQL 259

[Close]
BLAST of Cp4.1LG01g07080 vs. NCBI nr
Match: gi|657948444|ref|XP_008337789.1| (PREDICTED: protein RTE1-HOMOLOG-like isoform X1 [Malus domestica])

HSP 1 Score: 344.7 bits (883), Expect = 1.5e-91
Identity = 160/232 (68.97%), Postives = 198/232 (85.34%), Query Frame = 1 

Query: 64  LEMESSDDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGRED 123
           L ME+S  PE+ + I+G+    ++IDP+R+RFPCCIVWTPLPVISWL+PF+GHIGI RED
Sbjct: 29  LAMETSAGPEHXLRIDGSDSPTLQIDPKRSRFPCCIVWTPLPVISWLVPFVGHIGICRED 88

Query: 124 GVILDFAGPNFVCVDNFTFGAVARYLQINTDKCC----ISTHRSEDEFREVDNGREISTW 183
           GVILDFAGPNFVCVDNF+FGA  RY+QIN +KCC    +S ++SED++ E + GR+I TW
Sbjct: 89  GVILDFAGPNFVCVDNFSFGAATRYIQINKEKCCAITDLSEYQSEDQYGENEPGRDIKTW 148

Query: 184 DDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKG 243
           DDAL++ TQEFQHRAYNL TCNCHSFVANNLNRLGF +GGWNVVNLAAL+FLKG+WVS  
Sbjct: 149 DDALQKGTQEFQHRAYNLFTCNCHSFVANNLNRLGFRSGGWNVVNLAALIFLKGQWVSTA 208

Query: 244 AVIRTFLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 292
           AV+++ LPF ++F +GVA+ G+TFLT+L FFT FLVGWF+LGTY FK+L+QL
Sbjct: 209 AVVQSLLPFLIIFCLGVALAGSTFLTYLGFFTAFLVGWFLLGTYCFKSLIQL 260

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g07080 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RTH_ARATH7.6e-7558.55Protein RTE1-HOMOLOG OS=Arabidopsis thaliana GN=RTH PE=2 SV=1[more]
RTE1_ARATH6.9e-6053.81Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana GN=RTE1 PE=1 ... [more]
TM222_HUMAN3.4e-3040.48Transmembrane protein 222 OS=Homo sapiens GN=TMEM222 PE=1 SV=2[more]
TM222_MOUSE7.5e-3039.29Transmembrane protein 222 OS=Mus musculus GN=Tmem222 PE=1 SV=1[more]
BLAST of Cp4.1LG01g07080 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXZ7_CUCSA4.6e-11990.87Uncharacterized protein OS=Cucumis sativus GN=Csa_4G044470 PE=4 SV=1[more]
F6GWR6_VITVI1.6e-9272.29C-repeat binding transcription factor OS=Vitis vinifera GN=CBF2 PE=2 SV=1[more]
M5VRS1_PRUPE1.5e-9069.57Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010911mg PE=4 SV=1[more]
A0A103Y5G2_CYNCS2.6e-9068.40Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_018829 PE=4 ... [more]
W9SD51_9ROSA6.5e-8970.00Uncharacterized protein OS=Morus notabilis GN=L484_026815 PE=4 SV=1[more]
BLAST of Cp4.1LG01g07080 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G51040.14.3e-7658.55 RTE1-homolog[more]
AT2G26070.13.9e-6153.81 Protein of unknown function (DUF778)[more]
BLAST of Cp4.1LG01g07080 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457506|ref|XP_004146489.1|6.6e-11990.87PREDICTED: protein RTE1-HOMOLOG [Cucumis sativus][more]
gi|659102422|ref|XP_008452120.1|5.6e-11890.00PREDICTED: protein RTE1-HOMOLOG [Cucumis melo][more]
gi|225431245|ref|XP_002274106.1|2.4e-9272.29PREDICTED: protein RTE1-HOMOLOG isoform X1 [Vitis vinifera][more]
gi|657948446|ref|XP_008337795.1|1.5e-9168.97PREDICTED: protein RTE1-HOMOLOG-like isoform X2 [Malus domestica][more]
gi|657948444|ref|XP_008337789.1|1.5e-9168.97PREDICTED: protein RTE1-HOMOLOG-like isoform X1 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008496DUF778
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0016874 ligase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g07080.1Cp4.1LG01g07080.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008496Protein of unknown function DUF778PANTHERPTHR20921UNCHARACTERIZEDcoord: 19..274
score: 3.1E
IPR008496Protein of unknown function DUF778PFAMPF05608DUF778coord: 104..153
score: 1.3E-20coord: 161..235
score: 1.2
NoneNo IPR availablePANTHERPTHR20921:SF1PROTEIN RTE1-HOMOLOGcoord: 19..274
score: 3.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g07080Cucsa.201110Cucumber (Gy14) v1cgycpeB0569
Cp4.1LG01g07080CmaCh16G006390Cucurbita maxima (Rimu)cmacpeB354
Cp4.1LG01g07080CmaCh04G007680Cucurbita maxima (Rimu)cmacpeB731
Cp4.1LG01g07080CmoCh16G006960Cucurbita moschata (Rifu)cmocpeB316
Cp4.1LG01g07080Cla014561Watermelon (97103) v1cpewmB420
Cp4.1LG01g07080Csa4G044470Cucumber (Chinese Long) v2cpecuB400
Cp4.1LG01g07080MELO3C016410Melon (DHL92) v3.5.1cpemeB424
Cp4.1LG01g07080ClCG07G008790Watermelon (Charleston Gray)cpewcgB412
Cp4.1LG01g07080CSPI04G05240Wild cucumber (PI 183967)cpecpiB397
Cp4.1LG01g07080Lsi07G002320Bottle gourd (USVL1VR-Ls)cpelsiB373
Cp4.1LG01g07080MELO3C016410.2Melon (DHL92) v3.6.1cpemedB496
Cp4.1LG01g07080CsaV3_4G005380Cucumber (Chinese Long) v3cpecucB0497
Cp4.1LG01g07080Bhi01G001884Wax gourdcpewgoB0522
Cp4.1LG01g07080CsGy4G005150Cucumber (Gy14) v2cgybcpeB502
Cp4.1LG01g07080Carg05758Silver-seed gourdcarcpeB1418
Cp4.1LG01g07080Carg14167Silver-seed gourdcarcpeB1303
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g07080Cp4.1LG14g01770Cucurbita pepo (Zucchini)cpecpeB237
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g07080Wax gourdcpewgoB0510
Cp4.1LG01g07080Cucurbita pepo (Zucchini)cpecpeB073
Cp4.1LG01g07080Cucurbita pepo (Zucchini)cpecpeB233
Cp4.1LG01g07080Cucurbita pepo (Zucchini)cpecpeB385
Cp4.1LG01g07080Cucurbita maxima (Rimu)cmacpeB350
Cp4.1LG01g07080Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g07080Cucurbita maxima (Rimu)cmacpeB876
Cp4.1LG01g07080Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g07080Cucurbita moschata (Rifu)cmocpeB684
Cp4.1LG01g07080Cucurbita moschata (Rifu)cmocpeB813
Cp4.1LG01g07080Cucumber (Gy14) v2cgybcpeB807
Cp4.1LG01g07080Melon (DHL92) v3.6.1cpemedB510
Cp4.1LG01g07080Silver-seed gourdcarcpeB1302
Cp4.1LG01g07080Cucumber (Chinese Long) v3cpecucB0580