CsGy4G005150 (gene) Cucumber (Gy14) v2

Overview
NameCsGy4G005150
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionRTE1 isoform 1
LocationChr4 : 3694476 .. 3696152 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTTGGAAATGGAATCAAGTAAGGATCCTGAGAATCAGCTCATGATTGAAGGAAATATTGCTCAGAATATGAAGATCGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCTTGGCTTGTTCCTTTCATTGGTCACATTGGTATTGGTAGAGAGGATGGAGTAATCTTGGACTTTGCTGGCCCCAATTTTGTTTGTGTGGACAACTTCACATTTGGAGCTGTCGCACGGTATCTTCAAATCAACAGAGATAAGGTACAAGCTAATTTCCACAATTGAACTAAAGATCAATCCCTTACAATCATTTTTTACCCAACTGATTTCATCATATATTAGTGATATAATATTAGATCTGGCCTTATTTTTGGATCAATTCGTGATTTAACATAGTATACATAGTCCAAAAGGTTCTGTGTTCAAACCCTATTTTCTCTAATCTTGATTTTCACATGTTGGATCTCTTACATATTTCAAGCTCTACAAGTGAGTGAGGAGTGTTAGTAATATAATATTAAATTTGTTTGACCCATTAGCTCAAGATTTTTTGTTTAATTGGTGATTTAACAATGTACTCGACTTGCAGTGTTGCATTTCGGCTCATAGAAGTGAAGAAGAATTGAGGGAAGTTGATCATAGCAGAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGAGCCTACAATCTCTTGACATGCAATTGTCATTCCTTTGTGGCTAATAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTCAAGGGTCGGTGGGTCAGTAAAGGAGCTGTTATCCGAACGTTCTTACCATTTGTTGTGGTTTTCAGTATTGGACTCGCATTGGGGGATACTACGTTTCTTACCTTCTTGGCATTCTTCACTTTCTTCTTGGTTGGTTGGTTCATTCTCGGTACTTACGTCTTCAAAAATTTGGTTCAGTTGTAAAATGTAACACATTGGATTCTGGTAGTTAAGTGAAGGTCAATTGCTTTTCTTCGTTGTATTTGTCCAAATCTATGTTATTGTGCCGTGCAGTTCATATGGCGTATTATATACCATGTAGGTAGGAGGCAAATCATTTGATGTAACTCACGACCGTGAATTCTGGCAGCTTGTTTAGGCCATTAATGAATAGAGTTCATGAAATGCTAACTAGATAAGTGATTATGATAAATCAAAATATCTAAATAAAATCGTTTGTACAATTTTAAATCAGAACTTTTATCTTGTCTGTTGAATGTACTATTTAGTTTTAAAGGCAAGTCTGAATGAAATTATCATTGCAAAAGTAAGCAGAGTATTGTTTGCTCCCTTTTGCCCCTTAGATAAATAACATTTTTTTCTGGTCATTAAACGAAATCACATTGTTACATCAGGATCTCCTCCTAGCATGAAGTCAAATAGATAAAAGCGTGTGCTCCCCTCTAAAATGGAAGGGGAGGTAGCTGCAGATTCAACTTAGTGCCCTAGAAGGAACAAATCACCCCCACACAAAACACAAATTACTTTTTTTTTCCCTAATGAACACTGTTGTATAAAAGCTGCTGAACCATTTGAAACCAATTTCCTTTTGCTGTACAGGTAACCAGGATGAAGACTGA

mRNA sequence

ATGAGTTTGGAAATGGAATCAAGTAAGGATCCTGAGAATCAGCTCATGATTGAAGGAAATATTGCTCAGAATATGAAGATCGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCTTGGCTTGTTCCTTTCATTGGTCACATTGGTATTGGTAGAGAGGATGGAGTAATCTTGGACTTTGCTGGCCCCAATTTTGTTTGTGTGGACAACTTCACATTTGGAGCTGTCGCACGAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGAGCCTACAATCTCTTGACATGCAATTGTCATTCCTTTGTGGCTAATAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTCAAGGGTCGGTGGGTCAGTAAAGGAGCTGTTATCCGAACGTTCTTACCATTTGTTGTGGTTTTCAGTATTGGACTCGCATTGGGGGATACTACGTTTCTTACCTTCTTGGCATTCTTCACTTTCTTCTTGGTTGGTTGGTTCATTCTCGGTAACCAGGATGAAGACTGA

Coding sequence (CDS)

ATGAGTTTGGAAATGGAATCAAGTAAGGATCCTGAGAATCAGCTCATGATTGAAGGAAATATTGCTCAGAATATGAAGATCGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCTTGGCTTGTTCCTTTCATTGGTCACATTGGTATTGGTAGAGAGGATGGAGTAATCTTGGACTTTGCTGGCCCCAATTTTGTTTGTGTGGACAACTTCACATTTGGAGCTGTCGCACGAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGAGCCTACAATCTCTTGACATGCAATTGTCATTCCTTTGTGGCTAATAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTCAAGGGTCGGTGGGTCAGTAAAGGAGCTGTTATCCGAACGTTCTTACCATTTGTTGTGGTTTTCAGTATTGGACTCGCATTGGGGGATACTACGTTTCTTACCTTCTTGGCATTCTTCACTTTCTTCTTGGTTGGTTGGTTCATTCTCGGTAACCAGGATGAAGACTGA

Protein sequence

MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGNQDED
Homology
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BLAST of CsGy4G005150 vs. NCBI nr
Match: XP_004146489.1 (PREDICTED: protein RTE1-HOMOLOG [Cucumis sativus] >KGN53282.1 hypothetical protein Csa_4G044470 [Cucumis sativus])

HSP 1 Score: 372.9 bits (956), Expect = 6.9e-100
Identity = 193/220 (87.73%), Postives = 193/220 (87.73%), Query Frame = 0 

Query: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60
           MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVA---------------------------REISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVA                           REISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180
           ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVVFSIGLALGDTTFLTFXXXXXFFLVGWFILG 194
           IRTFLPFVVVFSIGLALGDTTFLTFXXXXXFFLVGWFILG
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFXXXXXFFLVGWFILG 220

[Close]
BLAST of CsGy4G005150 vs. NCBI nr
Match: XP_008452120.1 (PREDICTED: protein RTE1-HOMOLOG [Cucumis melo] >XP_016901175.1 PREDICTED: protein RTE1-HOMOLOG [Cucumis melo])

HSP 1 Score: 368.6 bits (945), Expect = 1.3e-98
Identity = 190/220 (86.36%), Postives = 193/220 (87.73%), Query Frame = 0 

Query: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60
           MSLEMES+KDPENQLMIEGNIAQ+MKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 1   MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVA---------------------------REISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVA                           REISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDD 120

Query: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180
           ALRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVVFSIGLALGDTTFLTFXXXXXFFLVGWFILG 194
           IRTFLPFVVVFSIGLALGDTTFLTFXXXXXFFLVGWFILG
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFXXXXXFFLVGWFILG 220

[Close]
BLAST of CsGy4G005150 vs. NCBI nr
Match: XP_022929506.1 (protein RTE1-HOMOLOG isoform X1 [Cucurbita moschata])

HSP 1 Score: 360.9 bits (925), Expect = 2.7e-96
Identity = 181/218 (83.03%), Postives = 184/218 (84.40%), Query Frame = 0 

Query: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60
           M+LEMESS DPENQ+MIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 1   MTLEMESSNDPENQMMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVAR-------------------------EISTWDDAL 120
           EDGVILDFAGPNFVCVDNFTFGAVAR                         EISTWDDAL
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQISSDKCXXXXXRRSEEDEFRDGEISTWDDAL 120

Query: 121 RRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIR 180
           RRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIR
Sbjct: 121 RRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIR 180

Query: 181 TFLPFVVVFSIGLALGDTTFLTFXXXXXFFLVGWFILG 194
           T LPFVVVFSIGLALG TTFLTF      FLVGWFILG
Sbjct: 181 TLLPFVVVFSIGLALGGTTFLTFLAFFNVFLVGWFILG 218

[Close]
BLAST of CsGy4G005150 vs. NCBI nr
Match: XP_023552337.1 (protein RTE1-HOMOLOG-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360.9 bits (925), Expect = 2.7e-96
Identity = 181/218 (83.03%), Postives = 184/218 (84.40%), Query Frame = 0 

Query: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60
           M+LEMESS DPENQ+MIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 1   MTLEMESSNDPENQMMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVAR-------------------------EISTWDDAL 120
           EDGVILDFAGPNFVCVDNFTFGAVAR                         EISTWDDAL
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINSDKCCCIVTHRSEEDEFREGEISTWDDAL 120

Query: 121 RRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIR 180
           RRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIR
Sbjct: 121 RRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIR 180

Query: 181 TFLPFVVVFSIGLALGDTTFLTFXXXXXFFLVGWFILG 194
           T LPFVVVFSIGLALG TTFLTF      FLVGWFILG
Sbjct: 181 TLLPFVVVFSIGLALGGTTFLTFLAFFNVFLVGWFILG 218

[Close]
BLAST of CsGy4G005150 vs. NCBI nr
Match: XP_022984318.1 (protein RTE1-HOMOLOG [Cucurbita maxima] >XP_022984319.1 protein RTE1-HOMOLOG [Cucurbita maxima])

HSP 1 Score: 359.4 bits (921), Expect = 7.9e-96
Identity = 180/218 (82.57%), Postives = 183/218 (83.94%), Query Frame = 0 

Query: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60
           M+LEMESS DPENQ+MIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 1   MTLEMESSNDPENQMMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVAR-------------------------EISTWDDAL 120
           EDGVILDFAGPNFVCVDNFTFGAV R                         EISTWDDAL
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVVRYLQINSDKCCCIVTRRSEEDEFREGEISTWDDAL 120

Query: 121 RRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIR 180
           RRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIR
Sbjct: 121 RRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIR 180

Query: 181 TFLPFVVVFSIGLALGDTTFLTFXXXXXFFLVGWFILG 194
           T LPFVVVFSIGLALG TTFLTF      FLVGWFILG
Sbjct: 181 TLLPFVVVFSIGLALGGTTFLTFLAFFNVFLVGWFILG 218

[Close]
BLAST of CsGy4G005150 vs. TAIR10
Match: AT3G51040.1 (RTE1-homolog)

HSP 1 Score: 256.5 bits (654), Expect = 1.3e-68
Identity = 124/221 (56.11%), Postives = 153/221 (69.23%), Query Frame = 0 

Query: 6   ESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVI 65
           E++ D E+++MI   ++  MKIDP+R RFPCCIVWTPLP ISWLVPFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVAREIS---------------------------------TWD 125
           LDFAGPNFVCVDNF FGAV+R I                                  TWD
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKEMESSRSSSSGMFNGERRYEQEEDSHEKEPTWD 122

Query: 126 DALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGA 185
           DALR+STQE+QH +YN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV+K A
Sbjct: 123 DALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWVNKTA 182

Query: 186 VIRTFLPFVVVFSIGLALGDTTFLTFXXXXXFFLVGWFILG 194
           ++++ LP ++V++IG+ LG  TF+         L GWFI+G
Sbjct: 183 IVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIG 221

[Close]
BLAST of CsGy4G005150 vs. TAIR10
Match: AT2G26070.1 (Protein of unknown function (DUF778))

HSP 1 Score: 190.7 bits (483), Expect = 8.9e-49
Identity = 96/200 (48.00%), Postives = 125/200 (62.50%), Query Frame = 0 

Query: 26  KIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVA 85
           +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ VD+F FG  A
Sbjct: 43  EIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPA 102

Query: 86  REIS------------------------------TWDDALRRSTQEFQHRAYNLLTCNCH 145
           R +                               TWD+AL  ST+ F+H+ YN+ TCNCH
Sbjct: 103 RYLQLDRTKCCLPPNMGGHTCKYGFKHTDFGTARTWDNALSSSTRSFEHKTYNIFTCNCH 162

Query: 146 SFVANNLNRLGFRTGG---WNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLALGD 193
           SFVAN LNRL +  GG   WN+VN+A L+ +KG+W++  +V+R+FLP  VV S+G+ L  
Sbjct: 163 SFVANCLNRLCY--GGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLVG 222

[Close]
BLAST of CsGy4G005150 vs. Swiss-Prot
Match: sp|Q9SD42|RTH_ARATH (Protein RTE1-HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=RTH PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 2.4e-67
Identity = 124/221 (56.11%), Postives = 153/221 (69.23%), Query Frame = 0 

Query: 6   ESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVI 65
           E++ D E+++MI   ++  MKIDP+R RFPCCIVWTPLP ISWLVPFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVAREIS---------------------------------TWD 125
           LDFAGPNFVCVDNF FGAV+R I                                  TWD
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKEMESSRSSSSGMFNGERRYEQEEDSHEKEPTWD 122

Query: 126 DALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGA 185
           DALR+STQE+QH +YN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV+K A
Sbjct: 123 DALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWVNKTA 182

Query: 186 VIRTFLPFVVVFSIGLALGDTTFLTFXXXXXFFLVGWFILG 194
           ++++ LP ++V++IG+ LG  TF+         L GWFI+G
Sbjct: 183 IVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIG 221

[Close]
BLAST of CsGy4G005150 vs. Swiss-Prot
Match: sp|F4ITL6|RTE1_ARATH (Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana OX=3702 GN=RTE1 PE=1 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.6e-47
Identity = 96/200 (48.00%), Postives = 125/200 (62.50%), Query Frame = 0 

Query: 26  KIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVA 85
           +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ VD+F FG  A
Sbjct: 43  EIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPA 102

Query: 86  REIS------------------------------TWDDALRRSTQEFQHRAYNLLTCNCH 145
           R +                               TWD+AL  ST+ F+H+ YN+ TCNCH
Sbjct: 103 RYLQLDRTKCCLPPNMGGHTCKYGFKHTDFGTARTWDNALSSSTRSFEHKTYNIFTCNCH 162

Query: 146 SFVANNLNRLGFRTGG---WNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLALGD 193
           SFVAN LNRL +  GG   WN+VN+A L+ +KG+W++  +V+R+FLP  VV S+G+ L  
Sbjct: 163 SFVANCLNRLCY--GGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLVG 222

[Close]
BLAST of CsGy4G005150 vs. Swiss-Prot
Match: sp|Q9H0R3|TM222_HUMAN (Transmembrane protein 222 OS=Homo sapiens OX=9606 GN=TMEM222 PE=1 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 4.7e-31
Identity = 67/157 (42.68%), Postives = 95/157 (60.51%), Query Frame = 0 

Query: 27  IDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAR 86
           +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  FG  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 87  ------------EISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTG-GWN 146
                         + WD A+  +++E++HR +NL   NCHS VA  LN + +     WN
Sbjct: 105 YWKLDPAQVYASGPNAWDTAVHDASEEYKHRMHNLCCDNCHSHVALALNLMRYNNSTNWN 164

Query: 147 VVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLAL 171
           +V L     L G++VS GA ++T+LPF+++  I L +
Sbjct: 165 MVTLCFFCLLYGKYVSVGAFVKTWLPFILLLGIILTV 201

[Close]
BLAST of CsGy4G005150 vs. Swiss-Prot
Match: sp|Q8BVA2|TM222_MOUSE (Transmembrane protein 222 OS=Mus musculus OX=10090 GN=Tmem222 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.7e-31
Identity = 67/157 (42.68%), Postives = 95/157 (60.51%), Query Frame = 0 

Query: 27  IDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAR 86
           +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  FG  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSAGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 87  ------------EISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTG-GWN 146
                         + WD A+  +++E++HR +NL   NCHS VA  LN + +     WN
Sbjct: 105 FWKLDPGQVYASGPNAWDTAVHDASEEYKHRMHNLCCDNCHSHVALALNLMRYNNSTNWN 164

Query: 147 VVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLAL 171
           +V L     + G++VS GA ++T+LPFV++  I L +
Sbjct: 165 MVTLCCFCLIYGKYVSVGAFVKTWLPFVLLLGIILTV 201

[Close]
BLAST of CsGy4G005150 vs. TrEMBL
Match: tr|A0A0A0KXZ7|A0A0A0KXZ7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G044470 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 4.6e-100
Identity = 193/220 (87.73%), Postives = 193/220 (87.73%), Query Frame = 0 

Query: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60
           MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVA---------------------------REISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVA                           REISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180
           ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVVFSIGLALGDTTFLTFXXXXXFFLVGWFILG 194
           IRTFLPFVVVFSIGLALGDTTFLTFXXXXXFFLVGWFILG
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFXXXXXFFLVGWFILG 220

[Close]
BLAST of CsGy4G005150 vs. TrEMBL
Match: tr|A0A1S4DZL7|A0A1S4DZL7_CUCME (protein RTE1-HOMOLOG OS=Cucumis melo OX=3656 GN=LOC103493222 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 8.7e-99
Identity = 190/220 (86.36%), Postives = 193/220 (87.73%), Query Frame = 0 

Query: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60
           MSLEMES+KDPENQLMIEGNIAQ+MKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR
Sbjct: 1   MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 61  EDGVILDFAGPNFVCVDNFTFGAVA---------------------------REISTWDD 120
           EDGVILDFAGPNFVCVDNFTFGAVA                           REISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDD 120

Query: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180
           ALRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 181 IRTFLPFVVVFSIGLALGDTTFLTFXXXXXFFLVGWFILG 194
           IRTFLPFVVVFSIGLALGDTTFLTFXXXXXFFLVGWFILG
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFXXXXXFFLVGWFILG 220

[Close]
BLAST of CsGy4G005150 vs. TrEMBL
Match: tr|A0A2N9GQD7|A0A2N9GQD7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29657 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.3e-78
Identity = 143/220 (65.00%), Postives = 165/220 (75.00%), Query Frame = 0 

Query: 5   MESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 64
           ME + DPE+Q+M+EGN+ Q M+IDP +ARFPCCIVWTPLP+ISWLVPFIGHIGI REDGV
Sbjct: 1   MEENADPEHQMMMEGNVPQTMQIDPRKARFPCCIVWTPLPIISWLVPFIGHIGICREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVAREIS-------------------------------TWDD 124
           ILDFAGPNFVCVDNF FG+V R +                                TWDD
Sbjct: 61  ILDFAGPNFVCVDNFAFGSVTRYLQISKEKCGISPYPSLYNSEDGYIPDEPGREGLTWDD 120

Query: 125 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 184
           ALR+STQEFQHR+YNL  CNCHSFVANNLNR+ F +GGWNVVNLAALIFLKGRWVS GA+
Sbjct: 121 ALRKSTQEFQHRSYNLFACNCHSFVANNLNRMTFNSGGWNVVNLAALIFLKGRWVSTGAM 180

Query: 185 IRTFLPFVVVFSIGLALGDTTFLTFXXXXXFFLVGWFILG 194
           +RTFLPFV+ F++GLA G +TFLT+      FLVGWF+LG
Sbjct: 181 VRTFLPFVIAFALGLAFGGSTFLTYWAFFTCFLVGWFLLG 220

[Close]
BLAST of CsGy4G005150 vs. TrEMBL
Match: tr|W9SD51|W9SD51_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026815 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 3.5e-76
Identity = 143/220 (65.00%), Postives = 162/220 (73.64%), Query Frame = 0 

Query: 5   MESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 64
           M+S  D ENQLM EG+ + N +IDP+RARFPCCIVWTPLPVISWLVPF+GHIGI REDGV
Sbjct: 1   MDSDADTENQLMAEGSSSPNFQIDPKRARFPCCIVWTPLPVISWLVPFVGHIGICREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVA-------------------------------REISTWDD 124
           ILDFAGPNFVCVDNF FG VA                               REISTWDD
Sbjct: 61  ILDFAGPNFVCVDNFAFGVVARYLHISLHECYALPLPSLHKSEDQHRQDQPEREISTWDD 120

Query: 125 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 184
           ALR+ TQ FQHRAY+L TCNCHSFVANNLNRL F  GGWNVVNLAALIF+KG+WVSK ++
Sbjct: 121 ALRKGTQVFQHRAYSLFTCNCHSFVANNLNRLQFSNGGWNVVNLAALIFIKGKWVSKASM 180

Query: 185 IRTFLPFVVVFSIGLALGDTTFLTFXXXXXFFLVGWFILG 194
           +R+FLPF+VVFS+G ALG ++FL F      FLVGWF+ G
Sbjct: 181 VRSFLPFLVVFSLGFALGGSSFLIFLALFIVFLVGWFLFG 220

[Close]
BLAST of CsGy4G005150 vs. TrEMBL
Match: tr|A0A251NFA4|A0A251NFA4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G163300 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 3.9e-75
Identity = 138/222 (62.16%), Postives = 163/222 (73.42%), Query Frame = 0 

Query: 3   LEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGRED 62
           L ME+S  PE+ LMI+G+ +  ++IDP RARFPCCIVWTPLPVISWL+PFIGHIGI RED
Sbjct: 16  LAMETSASPEHNLMIDGSASPTLQIDPRRARFPCCIVWTPLPVISWLIPFIGHIGICRED 75

Query: 63  GVILDFAGPNFVCVDNFTFGAV-------------------------------AREISTW 122
           GVILDFAGPNFVCVDNF FGA                                 R+I TW
Sbjct: 76  GVILDFAGPNFVCVDNFAFGAATRYIQISKEKCHSIPNPSVCQSEDQYRQDEPGRDIMTW 135

Query: 123 DDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKG 182
           DDALR+ TQEFQHR+YN+LTCNCHSFVANNLNRLGF +GGWNVVNLAALIFLKG+WVS  
Sbjct: 136 DDALRKGTQEFQHRSYNILTCNCHSFVANNLNRLGFCSGGWNVVNLAALIFLKGKWVSTA 195

Query: 183 AVIRTFLPFVVVFSIGLALGDTTFLTFXXXXXFFLVGWFILG 194
           +++R+FLPF++ F +G+A   +TFLT+      FLVGWF+LG
Sbjct: 196 SMVRSFLPFLIAFGLGVAFAGSTFLTYLGFFTAFLVGWFLLG 237

The following BLAST results are available for this feature:
BLAST of CsGy4G005150 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146489.16.9e-10087.73PREDICTED: protein RTE1-HOMOLOG [Cucumis sativus] >KGN53282.1 hypothetical prote... [more]
XP_008452120.11.3e-9886.36PREDICTED: protein RTE1-HOMOLOG [Cucumis melo] >XP_016901175.1 PREDICTED: protei... [more]
XP_022929506.12.7e-9683.03protein RTE1-HOMOLOG isoform X1 [Cucurbita moschata][more]
XP_023552337.12.7e-9683.03protein RTE1-HOMOLOG-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022984318.17.9e-9682.57protein RTE1-HOMOLOG [Cucurbita maxima] >XP_022984319.1 protein RTE1-HOMOLOG [Cu... [more]
BLAST of CsGy4G005150 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G51040.11.3e-6856.11RTE1-homolog[more]
AT2G26070.18.9e-4948.00Protein of unknown function (DUF778)[more]
BLAST of CsGy4G005150 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SD42|RTH_ARATH2.4e-6756.11Protein RTE1-HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=RTH PE=2 SV=1[more]
sp|F4ITL6|RTE1_ARATH1.6e-4748.00Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana OX=3702 GN=RT... [more]
sp|Q9H0R3|TM222_HUMAN4.7e-3142.68Transmembrane protein 222 OS=Homo sapiens OX=9606 GN=TMEM222 PE=1 SV=2[more]
sp|Q8BVA2|TM222_MOUSE4.7e-3142.68Transmembrane protein 222 OS=Mus musculus OX=10090 GN=Tmem222 PE=1 SV=1[more]
BLAST of CsGy4G005150 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KXZ7|A0A0A0KXZ7_CUCSA4.6e-10087.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G044470 PE=4 SV=1[more]
tr|A0A1S4DZL7|A0A1S4DZL7_CUCME8.7e-9986.36protein RTE1-HOMOLOG OS=Cucumis melo OX=3656 GN=LOC103493222 PE=4 SV=1[more]
tr|A0A2N9GQD7|A0A2N9GQD7_FAGSY1.3e-7865.00Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29657 PE=4 SV=1[more]
tr|W9SD51|W9SD51_9ROSA3.5e-7665.00Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_026815 PE=4 SV=1[more]
tr|A0A251NFA4|A0A251NFA4_PRUPE3.9e-7562.16Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G163300 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008496DUF778
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G005150.1CsGy4G005150.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008496Protein of unknown function DUF778PFAMPF05608DUF778coord: 43..86
e-value: 6.4E-18
score: 65.6
coord: 89..147
e-value: 3.5E-18
score: 66.5
IPR008496Protein of unknown function DUF778PANTHERPTHR20921UNCHARACTERIZEDcoord: 5..88
coord: 88..190
NoneNo IPR availablePANTHERPTHR20921:SF1PROTEIN RTE1-HOMOLOGcoord: 5..88
coord: 88..190

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy4G005150Cla014561Watermelon (97103) v1cgybwmB288
CsGy4G005150Csa4G044470Cucumber (Chinese Long) v2cgybcuB165
CsGy4G005150MELO3C016410Melon (DHL92) v3.5.1cgybmeB269
CsGy4G005150ClCG07G008790Watermelon (Charleston Gray)cgybwcgB303
CsGy4G005150CSPI04G05240Wild cucumber (PI 183967)cgybcpiB168
CsGy4G005150CmaCh04G007680Cucurbita maxima (Rimu)cgybcmaB547
CsGy4G005150CmoCh16G006960Cucurbita moschata (Rifu)cgybcmoB467
CsGy4G005150Lsi07G002320Bottle gourd (USVL1VR-Ls)cgyblsiB277
CsGy4G005150Cp4.1LG14g01770Cucurbita pepo (Zucchini)cgybcpeB487
CsGy4G005150Cp4.1LG01g07080Cucurbita pepo (Zucchini)cgybcpeB502
CsGy4G005150MELO3C016410.2Melon (DHL92) v3.6.1cgybmedB266
CsGy4G005150CsaV3_4G005380Cucumber (Chinese Long) v3cgybcucB171
CsGy4G005150Cla97C07G135840Watermelon (97103) v2cgybwmbB305
CsGy4G005150Bhi01G001884Wax gourdcgybwgoB361
CsGy4G005150Carg05758Silver-seed gourdcarcgybB1005
CsGy4G005150Carg14167Silver-seed gourdcarcgybB0931
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy4G005150Wild cucumber (PI 183967)cgybcpiB190
CsGy4G005150Silver-seed gourdcarcgybB0416
CsGy4G005150Cucumber (Chinese Long) v3cgybcucB190
CsGy4G005150Watermelon (97103) v2cgybwmbB257
CsGy4G005150Cucumber (Gy14) v2cgybcgybB132
CsGy4G005150Cucurbita maxima (Rimu)cgybcmaB498
CsGy4G005150Cucurbita maxima (Rimu)cgybcmaB532
CsGy4G005150Cucurbita moschata (Rifu)cgybcmoB505
CsGy4G005150Cucurbita moschata (Rifu)cgybcmoB521
CsGy4G005150Cucurbita pepo (Zucchini)cgybcpeB476
CsGy4G005150Cucurbita pepo (Zucchini)cgybcpeB479
CsGy4G005150Cucumber (Chinese Long) v2cgybcuB187
CsGy4G005150Bottle gourd (USVL1VR-Ls)cgyblsiB240
CsGy4G005150Melon (DHL92) v3.5.1cgybmeB292
CsGy4G005150Melon (DHL92) v3.6.1cgybmedB290
CsGy4G005150Watermelon (Charleston Gray)cgybwcgB269
CsGy4G005150Watermelon (97103) v1cgybwmB305