MELO3C015373.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C015373.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	40S ribosomal protein S25
Location	chr02 : 1146224 .. 1148213 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGACCTAAGTCTCAACCATCTCTGAATTCGTTCGGCGTTCCTCTCTTCTCTTCTGCATCTTCATCAGCACATCCAACTCCGGCGGTGCAACTTCGATTCCATGGTAAAACTCTTGTCTACTCTCTTCCTTTTTCGTGAATCGGAATCTTCAGTTCACTTACTTACTCTTCTCGATTTGATGATTGTGTTAGGCGCCAAAGAAGGATAAGGCTCCTCCACCGTCTTCCAAGCCTGCCAAATCTGGCGGAGGAAAGCAGAAGAAGAAGGTGACGTTCCCAACTATATTTAAATTCATAGCTGAACTTTGTTTTGAATTATGTTAAGATTTCGTTGTGTAATGCTGAGGTTACTTTTGGGAGTGTTATATCGTCTAGGCTGGAAGGGTTTTGAAAACATTTGTTATGTTGTTTGTTTTAGTTTGTCTATGATACTATGATGTCCTGTGTGAAATGGGTTTCTGCCCCTTTTACTAGAATTTGTTTGCTTTCAAGCTTTATGAGGATTAGGATGATAAATAAGAGGAAAATTTATGGACACCATGAACTACAATCGTTTGTTTTGGTTTCCTTTTCTTTTTTTATTAACTTTTAAGATAATGCAGTTTTCTTGTTTTTAATTCTGTTTGTTGTTCATACAACAGAAGTGGAGTAAGGGAAAGCAAAAGGAGAAGGTCAACAACATGGTTTTGTTCGATCAAGGAACTTATGACAAGCTTCTTGTTGAAGTTCCCAAGTACAAGCTTGTCACTCCTTCAATCTTGTCCGATAGGTTAAGGGTACGTTTTTCAGTCTCTTCTTATCCATAATGTGGAATATGATTTCTGATTTTTTCTTGCTCGTATATTTCATCACAGATTCACAATGGTTTTTTACAAGTTCACGATATGAACAATGTTCATACTTTTTCATTAAAAACTATGTTTAAAATGTTTGATTCATTCAGTACTACTCCTATCCAAACTTATGTTAGACATGGATTCTGTTGAGAAACATGAGATCCAAATTCATTTGGACAACATTAGGTTAGTATCAAATACCTAATCATCTATGATAACGAATACTGCATTCTTCCTACTCCAAATATCATTTATACAATTGTGAATATGAATTCTAGAATCAAACTCTATGAACCATCACATGAAGGATCTCCTAGTCTACTCTACTTGACACTTCTTTTTTTTTTAAAAAAAAGAAATATATGGATGTTCAACATATATCATTTTTATACCTATTGTCAGTTTCGAGTAAAGGGTCTGAGTTGTATGCCTCAGTCCCTTGGGCTTATTAGCATTGATGGGAAGAATCCCTGGATCCTAGACTCGGGGCTACAGATCACTTGACACCTACCATAAACTCAAAGTAAATGGGTCATGTGTCTTTTTAGTCTCTACTCACTATTCTATACATGTCTAACACATTTGTCTTACTAAGAAGTGTTCGATACATGTCCAATAAGTGGACCAAGTGTTGCGGCTGATAAGCATTAGACACGTTATTCAAACTCAAGTGTATGTTGTTTGGGAACATGATTTGATTGAACTGCAAGCTGTAAGTTGACAAATGATTTTATGGCATTTGAATTTTCAGATCAACGGATCTCTTGCAAGAAGAGCAATCAAGGATTTGATGGCCAGAGGTCTCATCAGAATGGTGTCTGCTCATGCCAGCCAGGAGATCTACACAAGGGCTACCAATACCTAATTTCCCTTTCATTTGTCTTTTGAGTTTGCCATGAATTAGCTTCTTTTGGTTTCAAAGTCTCAATTCACATGGATGCTATAATTTTGCAATTTTTGACGTGATATCTTTCTTGTTGATCACTATTTTTATATTTATCAAGTTTAGACTTCCGAAAATTTTGTTCAAATTCACTTCTTTAAAGGCTTAATTTTATCTTTGTTGTGCAGTTTGGCTAACACCCAATAGAAACGCTTATCTTTGTCTTGCAGTTCGGCTAGCACCCAATAGAAAGACTTACAAATATTCTAT

mRNA sequence

ATTGACCTAAGTCTCAACCATCTCTGAATTCGTTCGGCGTTCCTCTCTTCTCTTCTGCATCTTCATCAGCACATCCAACTCCGGCGGTGCAACTTCGATTCCATGGCGCCAAAGAAGGATAAGGCTCCTCCACCGTCTTCCAAGCCTGCCAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAGTGGAGTAAGGGAAAGCAAAAGGAGAAGGTCAACAACATGGTTTTGTTCGATCAAGGAACTTATGACAAGCTTCTTGTTGAAGTTCCCAAGTACAAGCTTGTCACTCCTTCAATCTTGTCCGATAGGTTAAGGATCAACGGATCTCTTGCAAGAAGAGCAATCAAGGATTTGATGGCCAGAGGTCTCATCAGAATGGTGTCTGCTCATGCCAGCCAGGAGATCTACACAAGGGCTACCAATACCTAATTTCCCTTTCATTTGTCTTTTGAGTTTGCCATGAATTAGCTTCTTTTGGTTTCAAAGTCTCAATTCACATGGATGCTATAATTTTGCAATTTTTGACGTGATATCTTTCTTGTTGATCACTATTTTTATATTTATCAAGTTTAGACTTCCGAAAATTTTGTTCAAATTCACTTCTTTAAAGGCTTAATTTTATCTTTGTTGTGCAGTTTGGCTAACACCCAATAGAAACGCTTATCTTTGTCTTGCAGTTCGGCTAGCACCCAATAGAAAGACTTACAAATATTCTAT

Coding sequence (CDS)

ATGGCGCCAAAGAAGGATAAGGCTCCTCCACCGTCTTCCAAGCCTGCCAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAGTGGAGTAAGGGAAAGCAAAAGGAGAAGGTCAACAACATGGTTTTGTTCGATCAAGGAACTTATGACAAGCTTCTTGTTGAAGTTCCCAAGTACAAGCTTGTCACTCCTTCAATCTTGTCCGATAGGTTAAGGATCAACGGATCTCTTGCAAGAAGAGCAATCAAGGATTTGATGGCCAGAGGTCTCATCAGAATGGTGTCTGCTCATGCCAGCCAGGAGATCTACACAAGGGCTACCAATACCTAA

Protein sequence

MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT

Homology

[Close]

BLAST of MELO3C015373.2 vs. NCBI nr
Match: XP_016900931.1 (PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo])

HSP 1 Score: 160.6 bits (405), Expect = 3.0e-36
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 108

[Close]

BLAST of MELO3C015373.2 vs. NCBI nr
Match: XP_022150617.1 (40S ribosomal protein S25-2-like [Momordica charantia])

HSP 1 Score: 160.6 bits (405), Expect = 3.0e-36
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDK XXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 108

[Close]

BLAST of MELO3C015373.2 vs. NCBI nr
Match: XP_022961406.1 (40S ribosomal protein S25-2-like [Cucurbita moschata] >XP_022968822.1 40S ribosomal protein S25-2-like [Cucurbita maxima] >XP_023545343.1 40S ribosomal protein S25-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159.1 bits (401), Expect = 8.6e-36
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAH SQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHGSQEIYTRATNT 108

[Close]

BLAST of MELO3C015373.2 vs. NCBI nr
Match: XP_022945101.1 (40S ribosomal protein S25-2-like [Cucurbita moschata] >XP_022968354.1 40S ribosomal protein S25-2 [Cucurbita maxima] >XP_023541368.1 40S ribosomal protein S25-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 158.3 bits (399), Expect = 1.5e-35
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVS+H+SQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSSHSSQEIYTRATNT 108

[Close]

BLAST of MELO3C015373.2 vs. NCBI nr
Match: XP_004135650.1 (PREDICTED: 40S ribosomal protein S25-2-like [Cucumis sativus] >KGN66140.1 40S ribosomal protein S25 [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 4.3e-35
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           VT SILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
Sbjct: 61  VTLSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 108

[Close]

BLAST of MELO3C015373.2 vs. TAIR10
Match: AT2G21580.1 (Ribosomal protein S25 family protein)

HSP 1 Score: 148.7 bits (374), Expect = 2.1e-36
Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDK XXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLL E PK+KL
Sbjct: 1   MAPKKDKVXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+GLIRMVSAH+SQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]

BLAST of MELO3C015373.2 vs. TAIR10
Match: AT4G39200.1 (Ribosomal protein S25 family protein)

HSP 1 Score: 144.1 bits (362), Expect = 5.2e-35
Identity = 94/108 (87.04%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDK XXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+G+IRMV+AH+SQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]

BLAST of MELO3C015373.2 vs. TAIR10
Match: AT4G34555.1 (Ribosomal protein S25 family protein)

HSP 1 Score: 141.0 bits (354), Expect = 4.4e-34
Identity = 94/107 (87.85%), Postives = 102/107 (95.33%), Query Frame = 0


Query: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDK XXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATN 108
           +TPSILSDRLRINGSLARRAI++LMA+G IRMVSAH+SQ+IYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]

BLAST of MELO3C015373.2 vs. TAIR10
Match: AT2G16360.1 (Ribosomal protein S25 family protein)

HSP 1 Score: 127.1 bits (318), Expect = 6.6e-30
Identity = 63/78 (80.77%), Postives = 71/78 (91.03%), Query Frame = 0


Query: 29  SKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARRAIKDLMARG 88
           SKGKQKEKVNNMVLFDQ TYDKL+ E PK+KL+TPSILSDRLRINGSLAR+AI+DLM +G
Sbjct: 45  SKGKQKEKVNNMVLFDQATYDKLMSEAPKFKLITPSILSDRLRINGSLARKAIRDLMVKG 104

Query: 89  LIRMVSAHASQEIYTRAT 107
            IRMVS H+SQ+I TRAT
Sbjct: 105 TIRMVSTHSSQQINTRAT 122

[Close]

BLAST of MELO3C015373.2 vs. Swiss-Prot
Match: sp|Q9SIK2|RS252_ARATH (40S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.8e-35
Identity = 97/108 (89.81%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDK XXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLL E PK+KL
Sbjct: 1   MAPKKDKVXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+GLIRMVSAH+SQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]

BLAST of MELO3C015373.2 vs. Swiss-Prot
Match: sp|Q9T029|RS254_ARATH (40S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 9.4e-34
Identity = 94/108 (87.04%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDK XXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           +TPSILSDR+RINGSLARRAI++LMA+G+IRMV+AH+SQ+IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]

BLAST of MELO3C015373.2 vs. Swiss-Prot
Match: sp|Q8GYL5|RS253_ARATH (40S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2)

HSP 1 Score: 141.0 bits (354), Expect = 7.9e-33
Identity = 94/107 (87.85%), Postives = 102/107 (95.33%), Query Frame = 0


Query: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDK XXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATN 108
           +TPSILSDRLRINGSLARRAI++LMA+G IRMVSAH+SQ+IYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]

BLAST of MELO3C015373.2 vs. Swiss-Prot
Match: sp|P46301|RS25_SOLLC (40S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.8e-32
Identity = 95/108 (87.96%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKK +XXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFD+ TYDKLL E PKYKL
Sbjct: 1   MAPKKAQXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDKSTYDKLLSEAPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           +TPS+LSDRLRI+GSLAR+AI+DLMARG IRMVSAHASQ+IYTRATNT
Sbjct: 61  ITPSVLSDRLRISGSLARKAIRDLMARGSIRMVSAHASQQIYTRATNT 108

[Close]

BLAST of MELO3C015373.2 vs. Swiss-Prot
Match: sp|Q9SIW5|RS251_ARATH (40S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3)

HSP 1 Score: 133.3 bits (334), Expect = 1.7e-30
Identity = 90/106 (84.91%), Postives = 98/106 (92.45%), Query Frame = 0


Query: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDK XXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQ TYDKL+ E PK+KL
Sbjct: 1   MAPKKDKVXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRAT 107
           +TPSILSDRLRINGSLAR+AI+DLM +G IRMVS H+SQ+I TRAT
Sbjct: 61  ITPSILSDRLRINGSLARKAIRDLMVKGTIRMVSTHSSQQINTRAT 106

[Close]

BLAST of MELO3C015373.2 vs. TrEMBL
Match: tr|A0A1S4DY71|A0A1S4DY71_CUCME (40S ribosomal protein S25-2-like OS=Cucumis melo OX=3656 GN=LOC103492227 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.0e-36
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 108

[Close]

BLAST of MELO3C015373.2 vs. TrEMBL
Match: tr|A0A0A0LW64|A0A0A0LW64_CUCSA (40S ribosomal protein S25 OS=Cucumis sativus OX=3659 GN=Csa_1G573590 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.8e-35
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           VT SILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT
Sbjct: 61  VTLSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 108

[Close]

BLAST of MELO3C015373.2 vs. TrEMBL
Match: tr|A0A1S3C4W3|A0A1S3C4W3_CUCME (40S ribosomal protein S25-2-like OS=Cucumis melo OX=3656 GN=LOC103496510 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.1e-34
Identity = 103/108 (95.37%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLL EVPKYKL
Sbjct: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARG IRM+SAH+SQ+IYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]

BLAST of MELO3C015373.2 vs. TrEMBL
Match: tr|A0A2C9VYF6|A0A2C9VYF6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G003200 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.3e-34
Identity = 103/108 (95.37%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQ TYDKLL EVPKYKL
Sbjct: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQATYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           VTPSILSDRLRINGSLARRAIKDLMARG IRM+SAHASQ+IYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGAIRMISAHASQQIYTRATNT 108

[Close]

BLAST of MELO3C015373.2 vs. TrEMBL
Match: tr|A0A1R3K668|A0A1R3K668_COCAP (Ribosomal protein S25 OS=Corchorus capsularis OX=210143 GN=CCACVL1_02790 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 7.0e-34
Identity = 101/108 (93.52%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 1   MAPKKDKXXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60
           MAPKKDK XXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQ TYDKLL EVPKYKL
Sbjct: 1   MAPKKDKAXXXXXXXXXXXXXXXXXXXXSKGKQKEKVNNMVLFDQATYDKLLSEVPKYKL 60

Query: 61  VTPSILSDRLRINGSLARRAIKDLMARGLIRMVSAHASQEIYTRATNT 109
           +TPSILSDRLRINGSLARRAIKDLMARG IRM+SAHASQ+IYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGAIRMISAHASQQIYTRATNT 108

The following BLAST results are available for this feature:

BLAST of MELO3C015373.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900931.1	3.0e-36	100.00	PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo]	[more]
XP_022150617.1	3.0e-36	99.07	40S ribosomal protein S25-2-like [Momordica charantia]	[more]
XP_022961406.1	8.6e-36	99.07	40S ribosomal protein S25-2-like [Cucurbita moschata] >XP_022968822.1 40S riboso...	[more]
XP_022945101.1	1.5e-35	98.15	40S ribosomal protein S25-2-like [Cucurbita moschata] >XP_022968354.1 40S riboso...	[more]
XP_004135650.1	4.3e-35	99.07	PREDICTED: 40S ribosomal protein S25-2-like [Cucumis sativus] >KGN66140.1 40S ri...	[more]

BLAST of MELO3C015373.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21580.1	2.1e-36	89.81	Ribosomal protein S25 family protein	[more]
AT4G39200.1	5.2e-35	87.04	Ribosomal protein S25 family protein	[more]
AT4G34555.1	4.4e-34	87.85	Ribosomal protein S25 family protein	[more]
AT2G16360.1	6.6e-30	80.77	Ribosomal protein S25 family protein	[more]

BLAST of MELO3C015373.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SIK2\|RS252_ARATH	3.8e-35	89.81	40S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1	[more]
sp\|Q9T029\|RS254_ARATH	9.4e-34	87.04	40S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1	[more]
sp\|Q8GYL5\|RS253_ARATH	7.9e-33	87.85	40S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2	[more]
sp\|P46301\|RS25_SOLLC	1.8e-32	87.96	40S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1	[more]
sp\|Q9SIW5\|RS251_ARATH	1.7e-30	84.91	40S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3	[more]

BLAST of MELO3C015373.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DY71\|A0A1S4DY71_CUCME	2.0e-36	100.00	40S ribosomal protein S25-2-like OS=Cucumis melo OX=3656 GN=LOC103492227 PE=4 SV...	[more]
tr\|A0A0A0LW64\|A0A0A0LW64_CUCSA	2.8e-35	99.07	40S ribosomal protein S25 OS=Cucumis sativus OX=3659 GN=Csa_1G573590 PE=4 SV=1	[more]
tr\|A0A1S3C4W3\|A0A1S3C4W3_CUCME	3.1e-34	95.37	40S ribosomal protein S25-2-like OS=Cucumis melo OX=3656 GN=LOC103496510 PE=4 SV...	[more]
tr\|A0A2C9VYF6\|A0A2C9VYF6_MANES	5.3e-34	95.37	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G003200 PE=4 SV=...	[more]
tr\|A0A1R3K668\|A0A1R3K668_COCAP	7.0e-34	93.52	Ribosomal protein S25 OS=Corchorus capsularis OX=210143 GN=CCACVL1_02790 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004977	Ribosomal_S25

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C015373.2.1	MELO3C015373.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.10.2780		coord: 21..108 e-value: 1.4E-38 score: 132.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	PANTHER	PTHR12850:SF13	SUBFAMILY NOT NAMED	coord: 1..108
IPR004977	Ribosomal protein S25	PFAM	PF03297	Ribosomal_S25	coord: 8..105 e-value: 6.9E-42 score: 141.7
IPR004977	Ribosomal protein S25	PANTHER	PTHR12850	FAMILY NOT NAMED	coord: 1..108
IPR004977	Ribosomal protein S25	PRODOM	PD012268		coord: 40..107 e-value: 8.0E-30 score: 319.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C015373.2	Csa1G573590	Cucumber (Chinese Long) v2	cumedB033
MELO3C015373.2	CSPI01G27190	Wild cucumber (PI 183967)	cpimedB036
MELO3C015373.2	Cucsa.289170	Cucumber (Gy14) v1	cgymedB480
MELO3C015373.2	CmaCh10G010950	Cucurbita maxima (Rimu)	cmamedB073
MELO3C015373.2	CmoCh10G011720	Cucurbita moschata (Rifu)	cmomedB066
MELO3C015373.2	Lsi06G001830	Bottle gourd (USVL1VR-Ls)	lsimedB418
MELO3C015373.2	Cp4.1LG11g09220	Cucurbita pepo (Zucchini)	cpemedB106
MELO3C015373.2	CsGy1G026390	Cucumber (Gy14) v2	cgybmedB032
MELO3C015373.2	Cla011300	Watermelon (97103) v1	medwmB262
MELO3C015373.2	ClCG03G016480	Watermelon (Charleston Gray)	medwcgB237
MELO3C015373.2	Cla97C03G066790	Watermelon (97103) v2	medwmbB235
MELO3C015373.2	Bhi02G001761	Wax gourd	medwgoB312
MELO3C015373.2	Carg27089	Silver-seed gourd	carmedB0774
MELO3C015373.2	CsaV3_1G039500	Cucumber (Chinese Long) v3	cucmedB039

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C015373.2	Cucurbita moschata (Rifu)	cmomedB069
MELO3C015373.2	Cucurbita pepo (Zucchini)	cpemedB391
MELO3C015373.2	Bottle gourd (USVL1VR-Ls)	lsimedB114
MELO3C015373.2	Watermelon (Charleston Gray)	medwcgB229
MELO3C015373.2	Watermelon (97103) v1	medwmB276