MELO3C015305 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C015305
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionER membrane protein complex subunit 6
Locationchr2 : 668138 .. 673101 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTAGTCTATATTACTCTTTCTTTTATACATTTTTTTACATATGCTATCAAGAACATAAAGATCAAATATTCATATTACTCTCAATAATCTTTTCTACCATTAGATATATAAATATTATTTTTTACTTAGAACACTTTGGTTCTTTCTTCAACACTCTTCTTTTTCGTAGTTTCTCTAATCTACCATTTACCATACAACAAATCGCGTCCTGATTTCTTTCTTCTCCCTCTCCATCGCTGCCATTATCGGTCGCCGGCTCCCTTCCATCTTCCGTTTTCCGGTCTTTTAACTTCAGATCATACGGCGCCAGAATTTATGGCGGGATACTCCTCCACTGCTTCTGACAAGAAATCGTCTGATTCGGCCGACGATATACCGATCTTTAATGCTGAAAATTTGCAAAACAACTTGAAGATAATATATTACAGGTTTTTTCGATGCTTCAATCAACTTTACTTTCTTGTTGATACCGATTTGTCTTTTATTCTCTCCTGCATCAAAAGTAGTTGAATCCTATCATTTTTCTTAGAATTGGAATCCTTCCGTGATAGACCTAGATCCTGTCTTTTCTATTTCTATTTTCTTAATTAGCAGCTTATGTAACTGTAGATTTAATTGGTTGACCTAAAATTTTACTGGGTTTTGAGCAATCTCGGGAATGTTTGCATTCAAAATGAGTAGCTACTAAAGGGACCCGATGTGATTGTTGTTGATTATTATGATATTGTTCTTGAGTTTCGTGAATTTAGATCATAAGCGTCTACTATCTTTTGCAGCCGGACGTTTTTGTCTATAATTGGTGGAGTCATTGCTGGAATTTTGGGATTCACTGGCCTGACTGGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCAGTTGCACTTGCAGCTAAGGCTGGGTTTTCCTTTCATTCATATTTTGAAAGCTGTAACCAGATTCTACTCGATGGCTTTCTGGGAGGACTTATGGTATGCGTCCTCTGCCCTTATTTTTTAGATTGGACAAAGTTGCAAGACACAATAGAGAACGTGGAATAGGATAATTGAATAATTTTATGTACTTGAATGAAACTGGTTTCTTTTGATGTTCTATTTTTATTTATAAGTAATATAAATTTTTACATCTAATGCCTCTAGGGTTTCTAAGTTACGAATCTTTCTTGTTAATTGCCTACATTTGTTCTGTATTTAGAAGAAATTAGTTACAATTGGTATTTTCAACCGCTTTACTCTCCTGCTTTCTACTATTGGAATGTGTAAGTTTGGAATCAAAGGAGAAGATAGGTCACAGTACTATCTTCAATGTTATTGTGCTGGAGGCTAGTTGAGAAAACACAATAAAACTCCATTTCTTTTAGAAGGTAGTATAACGCAAGAAGAGGAAGGCCCAATTCTAAGTTGAATGTTCTTTTAAACCCCCTTGGGATCCCTTTTAGGGTGATTTCTTATCCTCCTTTGGACAATTTTCACATTTCCTATTAAGGAAAAATATAGTTTGTTTGATCATACTAATAAGGAAAGGAAATAAAAAGAGGTGGTCAAGTTGATTTTAGGAAATGTTGAGGGTTTTCTTTTTTCCTTCCTCTCACTTGCAACAGGATAGAGGTCTCTAGAGCATTGGGATTGGACTCATTCCAATTCCTACAGAAACTTGGATAGACTGAAAAGTTGAGTTAGATAAATTCCTATGGGGTTTTTTTCAAGATTATGCTAATGAACAGTGATTTAAGAATGTTTTCATGGTATTCTATGATAGAGGTTGTTAATGGGGCAATGTTATTAAGGTGCATCCGGTTGCTCGCCTGAGTAGAGGCGGGGTCTTAACACCTTGCAAGTACCCAAGCTAAGCGCCTTTCAGTTGCCTTGAACGTGCTCACCTTGTTCAATTGCTCAACTTTTTTTTAGCAAAAAGTAAAAAAAAAAGAAAATCTTATCCAATAGGATTAAAAGGAAGTATCAAAGTTTGTAAAGGTAGAATTAAAGAAAAATCAAAGAAAGGAAGGAGAATTGAACAAGAAAAAGAGTCAAAGTAGAAACAAAATCATTTTTATTTCTATATCTTGCTTCAAATATTTTTTTCCTCGAGATTATTTGAGTTAATTTCCTCCTAATCTTATGTATATTTTATTTATATTGTTTTTGTTTATTTTTTTATTAACTGTGTGTCGCTTCAATCAGGCAACACCTATTTGTTGCCTCTCACCTTGAGGCCATTAAAAAGTTTGTGGCCTTAGAGTGCGCCTTGCACTTTGAAAACACTGAATGGGGTGTATTAGTGCTACTCATATTTGCTTAATGCCTAGCAAGTTTGGGGCTATGTACTTCCAGAATTTAGAGTGTAAACCTGTATGTAGTTTCAACACTAGCCTAGTCATTGAAAATATTTTTAGGGTGCTAGTTAAGAGAGGTGATGGTCTACCTTTTTTGAAGGTCCAATGTCATTCCTTCCAAGAAAAATTAAATGAGATTCTGCAAAGGTAAAAGCTGTAGGGTTTTTCTTCTGTATGGAGAAGTTAGGTTAGCCTTTAGTGGGCAATTTGCATCCTTCATTTTTTCCCATGTTTCGTGTGTCAGTGTGTGAACATGGAGGTAAGATTTAGGCTTCAATGGATCTGAGAGCTCAGGGTTTTGAAAGGAATTGGAGACTTCGGGGCAAGGGTGCCTTCAAAAGGCTAATTTCTTTGTTCTTTTTATGAGAGACCAAGAGTTAGATTAGAGTGACTAGGGACTTCTTAGGCTGAGTGTCTCTCTTTTTATGGATGTTGTTTTAAGTCTATTTCTCTACATGGATATTGATTGCAATCGAATCGAAGATTTTTAGTATAGGTGGGGTGATAAAATCTTCACTTGAGTAGTTTTCAATTTTCTGCTGCTGTTGATAAGAGTTTCTTCTTCTACTTGGAAGAAAAGTGCAAAAGCGATAACCTGTTCAATATTGTCAAAGCTTGTGAGGTCATGTCAGCCCCTAGGCCATAAGGTCAGCTGTAAAAGGGTAGTGTTTGGTCGATTGGAGTCCCTTGTTAGGTCCGTTTGGCTCTTTTTGAGGGCTGGATTTTTTGTTGCTTTGTATTTTTATAATAATTTTTTTTCTCAATTAAAGTTGGTATATTTGTCTAAAAGGCTACAAATGTAGTCATATTCTAAGTTGGTGTAAACGTTTGCTTGCTTAAAGATTATAGAGGATTAGGACTTGGCAAACGAGGATTTGGAGTATCTGCTGACTGCTGGAAAATCGAAAGTGGAAGCATTTTTTTTATGGTATAAGAAGTAAATGTGGTATGGATTGCTCTGGATAGTATTTGAAGGAACTCATAAGATGCAGCATGGAAATCAGCTGTGTATTTCAAATCCTTGGTGGAAGCGTTAGACAACTCAAAACAAAGGAATGAGAGGAGAATGAAATTTGGGAGGATTTTCTTATTAATTTAGTGGTCAGACCTAATAACAGGGAAGATGTTAATCATCATGGGTTGGCCTAGTGGTAAAAAAGAGACATAATTTCAATAACTAACTAAGATGGCATGAGTTCAATTTATGGTGGCCACCTACCTAGGAATTAGTTTCCTACTAGTTATCTTGACACCCAAATGTCATATAGGGTCAGGTGGGTTGTCTAGTAAGATTAGTCGAGGTGCGCGTAAGCTGGCTCGAACACTCACGGAAATAAAAAAAATAACAAGAGGAGTTGTTAGGTTTTGGAGTTTCAATTTCAAGGTGTTCTTACTATTTTCTTTTTGTTTCAAGCATATTAATATATTATTGATGTTTCTCAGGTGCTTCCAACCAAATTGCCTAGTTTTTCGGTGAATGTTTCTAAAGTTTGAATATTTTTTTTTTTATTCTCTTTTCAAAATTTCATCCTCGTAACATCAGTAAGAGTACAAAAGAAATTCTGAACTTAAGTATCACACCTTTTGAGGATCAATTATCTATTTATGGTCCCTCCTACTTTGGGGTCTGTGGGTTCATCTTTTGGTGGGACTTCTCTCAATGGTCTTGAATGAACTCCAGAATTCTTGAGTTTCAGAAAAGCCCAGATTGATCTCTACAATTTCTTTATGACATTAGAAAATGTTTGTTTCTCAACATCCAGTAGATACTATGATTGGAAGATGTATTATTTGTCTTGTGACGACTTCTTATTTTTATGTGTTTGGTTATCCAACAACCTATTGACACTAACCCTTCGTTCTAATTTTGCAGTCGTTCGTGCTTTTCTGGACGTATCCTTTTATATAACTTTATGGTTTATACAAAGTACTTTTTGCCATTACTTCAAAAAATTTCCAACATTACACTATCGGAACATTCTGAAGATATACTTTTTTTCTTTCTGTAAGAGGTAGTTCTCATTTACATAGCCAAAGGGTATATTGCTCAGTTCATTATATGAAGTATATTACTTCCCTTGCGTATTTCTGTTTCAATTTGTATATTGAATTTGTTTTTCTTGACATGAAAAAGTTTTGCGTACGATATCGTTCATATATTTTGAGGCCAAATGCTGGCAGGAATTGGAAATTCTAGAGGTAGCTGCAGCTCTGTACACTTCGACTCGAGACTGGGAGTTCCAAAGGAGTAAATGAACTTTTGTCCTTCAGAAATGATAACTAGATTGAGTTTTATCTTTTGACCCCTTTCACCTTAATGATAATTGTGTTAAGTTTCTTTATAATCCTTTCATTACTATGTTTAGAATCTGAGTAGAGCGGGGCATTTTCTAGTGACGGGCAGAGATTTTATTTATTCTTTCTAGTTTTACAAGTTCTTGAGCTTTTGTTCTGAACTGATATATTTTAGTTCATCTGTTTTCTTATAAATAGTTCACGAGGCAATTCAGAACTCACAATGGTAGCTTTCTTGATCGAAGTGATCGTTAATAAGTTAGACTCTCGTGGGCATCAAAAAGTTCATTGATCTTTTAGTAAATAAATACAATCATTGGAGTTGTGCAACTCAA

mRNA sequence

AGTAGTCTATATTACTCTTTCTTTTATACATTTTTTTACATATGCTATCAAGAACATAAAGATCAAATATTCATATTACTCTCAATAATCTTTTCTACCATTAGATATATAAATATTATTTTTTACTTAGAACACTTTGGTTCTTTCTTCAACACTCTTCTTTTTCGTAGTTTCTCTAATCTACCATTTACCATACAACAAATCGCGTCCTGATTTCTTTCTTCTCCCTCTCCATCGCTGCCATTATCGGTCGCCGGCTCCCTTCCATCTTCCGTTTTCCGGTCTTTTAACTTCAGATCATACGGCGCCAGAATTTATGGCGGGATACTCCTCCACTGCTTCTGACAAGAAATCGTCTGATTCGGCCGACGATATACCGATCTTTAATGCTGAAAATTTGCAAAACAACTTGAAGATAATATATTACAGCCGGACGTTTTTGTCTATAATTGGTGGAGTCATTGCTGGAATTTTGGGATTCACTGGCCTGACTGGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCAGTTGCACTTGCAGCTAAGGCTGGGTTTTCCTTTCATTCATATTTTGAAAGCTGTAACCAGATTCTACTCGATGGCTTTCTGGGAGGACTTATGTCGTTCGTGCTTTTCTGGACGTATCCTTTTATATAACTTTATGGTTTATACAAAGTACTTTTTGCCATTACTTCAAAAAATTTCCAACATTACACTATCGGAACATTCTGAAGATATACTTTTTTTCTTTCTGTAAGAGGTAGTTCTCATTTACATAGCCAAAGGGTATATTGCTCAGTTCATTATATGAAGTATATTACTTCCCTTGCGTATTTCTGTTTCAATTTGTATATTGAATTTGTTTTTCTTGACATGAAAAAGTTTTGCGTACGATATCGTTCATATATTTTGAGGCCAAATGCTGGCAGGAATTGGAAATTCTAGAGGTAGCTGCAGCTCTGTACACTTCGACTCGAGACTGGGAGTTCCAAAGGAGTAAATGAACTTTTGTCCTTCAGAAATGATAACTAGATTGAGTTTTATCTTTTGACCCCTTTCACCTTAATGATAATTGTGTTAAGTTTCTTTATAATCCTTTCATTACTATGTTTAGAATCTGAGTAGAGCGGGGCATTTTCTAGTGACGGGCAGAGATTTTATTTATTCTTTCTAGTTTTACAAGTTCTTGAGCTTTTGTTCTGAACTGATATATTTTAGTTCATCTGTTTTCTTATAAATAGTTCACGAGGCAATTCAGAACTCACAATGGTAGCTTTCTTGATCGAAGTGATCGTTAATAAGTTAGACTCTCGTGGGCATCAAAAAGTTCATTGATCTTTTAGTAAATAAATACAATCATTGGAGTTGTGCAACTCAA

Coding sequence (CDS)

ATGGCGGGATACTCCTCCACTGCTTCTGACAAGAAATCGTCTGATTCGGCCGACGATATACCGATCTTTAATGCTGAAAATTTGCAAAACAACTTGAAGATAATATATTACAGCCGGACGTTTTTGTCTATAATTGGTGGAGTCATTGCTGGAATTTTGGGATTCACTGGCCTGACTGGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCAGTTGCACTTGCAGCTAAGGCTGGGTTTTCCTTTCATTCATATTTTGAAAGCTGTAACCAGATTCTACTCGATGGCTTTCTGGGAGGACTTATGTCGTTCGTGCTTTTCTGGACGTATCCTTTTATATAA

Protein sequence

MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTYPFI*
Homology
[Close]
BLAST of MELO3C015305 vs. Swiss-Prot
Match: EMC6_HUMAN (ER membrane protein complex subunit 6 OS=Homo sapiens GN=EMC6 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.6e-15
Identity = 38/91 (41.76%), Postives = 53/91 (58.24%), Query Frame = 1 

Query: 21  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSVALAAKAG 80
           P  +   ++ N  ++ Y RT +S + G  AGILG TGL GFIFY L   + S+ L  KAG
Sbjct: 12  PFISEAAVRGNAAVLDYCRTSVSALSGATAGILGLTGLYGFIFYLLASVLLSLLLILKAG 71

Query: 81  FSFHSYFESCNQILLDGFLGGLMSFVLFWTY 112
             ++ YF+S   +   G +GGL ++VLFWT+
Sbjct: 72  RRWNKYFKSRRPLFTGGLIGGLFTYVLFWTF 102

[Close]
BLAST of MELO3C015305 vs. Swiss-Prot
Match: EMC6_MOUSE (ER membrane protein complex subunit 6 OS=Mus musculus GN=Emc6 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.6e-15
Identity = 38/91 (41.76%), Postives = 53/91 (58.24%), Query Frame = 1 

Query: 21  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSVALAAKAG 80
           P  +   ++ N  ++ Y RT +S + G  AGILG TGL GFIFY L   + S+ L  KAG
Sbjct: 12  PFISEAAVRGNAAVLDYCRTSVSALSGATAGILGLTGLYGFIFYLLASVLLSLLLILKAG 71

Query: 81  FSFHSYFESCNQILLDGFLGGLMSFVLFWTY 112
             ++ YF+S   +   G +GGL ++VLFWT+
Sbjct: 72  RRWNKYFKSRRPLFTGGLIGGLFTYVLFWTF 102

[Close]
BLAST of MELO3C015305 vs. Swiss-Prot
Match: EMC6_XENTR (ER membrane protein complex subunit 6 OS=Xenopus tropicalis GN=emc6 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.0e-14
Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 1 

Query: 28  LQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYF 87
           ++ N  ++ Y RT +S + G  AGILG T L GFIFYFL   + S+ L  K+G  ++ YF
Sbjct: 19  VRGNAAVLDYCRTSVSALSGATAGILGLTALYGFIFYFLASFLLSLLLVLKSGRKWNKYF 78

Query: 88  ESCNQILLDGFLGGLMSFVLFWTY 112
           +S   +   G +GGL ++VLFWT+
Sbjct: 79  KSRKPLFTGGLIGGLFTYVLFWTF 102

[Close]
BLAST of MELO3C015305 vs. Swiss-Prot
Match: EMC6_XENLA (ER membrane protein complex subunit 6 OS=Xenopus laevis GN=emc6 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.9e-14
Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 1 

Query: 28  LQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYF 87
           ++ N  ++ Y RT +S + G  AGILG T L GFIFYFL   + S+ L  K+G  ++ YF
Sbjct: 19  VRGNAAVLDYCRTSVSALSGATAGILGLTSLYGFIFYFLASFLLSLLLVLKSGRKWNKYF 78

Query: 88  ESCNQILLDGFLGGLMSFVLFWTY 112
           +S   +   G +GGL ++VLFWT+
Sbjct: 79  KSRKPLFTGGLVGGLFTYVLFWTF 102

[Close]
BLAST of MELO3C015305 vs. Swiss-Prot
Match: EMC6_BOVIN (ER membrane protein complex subunit 6 OS=Bos taurus GN=EMC6 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.1e-14
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 1 

Query: 21  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLVMAITSVALAAKAG 80
           P  +   ++ N  ++ Y RT +S + G  AGILG TGL GFIFY L   + S+ L  KA 
Sbjct: 12  PFISEAAVRGNAAVLDYCRTSVSALSGATAGILGLTGLYGFIFYLLASILLSLLLILKAR 71

Query: 81  FSFHSYFESCNQILLDGFLGGLMSFVLFWTY 112
             ++ YF+S   +   G +GGL ++VLFWT+
Sbjct: 72  RRWNKYFKSRRPLFTGGLIGGLFTYVLFWTF 102

[Close]
BLAST of MELO3C015305 vs. TrEMBL
Match: A0A0A0LZ06_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569390 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.9e-52
Identity = 106/110 (96.36%), Postives = 107/110 (97.27%), Query Frame = 1 

Query: 1   MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSSTASDKKSSD ADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFTGLTG
Sbjct: 1   MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTG 60

Query: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWT 111
           FIFYFLVMAITSVALAAKAGFSFHSYFESCNQIL DGFL GLMSFVLFWT
Sbjct: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWT 110

[Close]
BLAST of MELO3C015305 vs. TrEMBL
Match: V4RXU7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006078mg PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 4.0e-42
Identity = 86/112 (76.79%), Postives = 100/112 (89.29%), Query Frame = 1 

Query: 1   MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MA +S + + KKS+D ++D+ IFNAENLQ+N+K+IYYSRTFLSIIGGVIAGILGFTGL G
Sbjct: 44  MATHSDSVAGKKSNDVSNDLQIFNAENLQSNMKVIYYSRTFLSIIGGVIAGILGFTGLMG 103

Query: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTYP 113
           F+FYFL+MAITSV L AKA FS HSYF+S N+ILLDGFLGGLMSFVLFWTYP
Sbjct: 104 FVFYFLIMAITSVCLMAKAKFSVHSYFDSWNRILLDGFLGGLMSFVLFWTYP 155

[Close]
BLAST of MELO3C015305 vs. TrEMBL
Match: A0A0D2PNT3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G068700 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.2e-41
Identity = 84/114 (73.68%), Postives = 102/114 (89.47%), Query Frame = 1 

Query: 1   MAGYS-STASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLT 60
           MAG+S S++S+KKSS++ +D+P F+ EN+QNN+K+IYYSRTF+SIIGGVIAGILGFTG  
Sbjct: 1   MAGHSDSSSSEKKSSEAMNDVPTFSTENMQNNMKVIYYSRTFMSIIGGVIAGILGFTGFM 60

Query: 61  GFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTYPF 114
           GFIFYFLVMAITS+ L AKA FS H YF+S N+I+LDGF+GGLMSFVLFWTYPF
Sbjct: 61  GFIFYFLVMAITSIGLIAKAKFSVHLYFDSWNRIILDGFMGGLMSFVLFWTYPF 114

[Close]
BLAST of MELO3C015305 vs. TrEMBL
Match: A0A0B0PFK3_GOSAR (Transmembrane 93 OS=Gossypium arboreum GN=F383_07192 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.2e-41
Identity = 84/114 (73.68%), Postives = 102/114 (89.47%), Query Frame = 1 

Query: 1   MAGYS-STASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLT 60
           MAG+S S++S+KKSS++ +D+P F+ EN+QNN+K+IYYSRTF+SIIGGVIAGILGFTG  
Sbjct: 1   MAGHSDSSSSEKKSSEAMNDVPTFSTENMQNNMKVIYYSRTFMSIIGGVIAGILGFTGFM 60

Query: 61  GFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTYPF 114
           GFIFYFLVMAITS+ L AKA FS H YF+S N+I+LDGF+GGLMSFVLFWTYPF
Sbjct: 61  GFIFYFLVMAITSIGLIAKAKFSVHLYFDSWNRIILDGFMGGLMSFVLFWTYPF 114

[Close]
BLAST of MELO3C015305 vs. TrEMBL
Match: M5XSX3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013479mg PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 4.4e-41
Identity = 84/114 (73.68%), Postives = 103/114 (90.35%), Query Frame = 1 

Query: 1   MAGYS-STASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLT 60
           M G++ S+AS+KK S++A+ +P  NAENLQ+N+K+IYYSRTF+SIIGGVIAGILGFTGLT
Sbjct: 1   MGGHNDSSASEKKLSEAANVVPTLNAENLQSNMKVIYYSRTFMSIIGGVIAGILGFTGLT 60

Query: 61  GFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTYPF 114
           GFIFYFLVMA+TSV L AKAGF+ HSYF+S NQI+LDGFLGGL+SFVLFWT+ +
Sbjct: 61  GFIFYFLVMAVTSVGLIAKAGFTVHSYFDSWNQIILDGFLGGLLSFVLFWTFAY 114

[Close]
BLAST of MELO3C015305 vs. TAIR10
Match: AT5G49540.1 (AT5G49540.1 Rab5-interacting family protein)

HSP 1 Score: 152.5 bits (384), Expect = 1.6e-37
Identity = 73/106 (68.87%), Postives = 85/106 (80.19%), Query Frame = 1 

Query: 8   ASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTGFIFYFLV 67
           +S+K+S D   DIP F+AENLQNNLK+I  SRTFLSII GV+AGI+GF GL GF+FYF+V
Sbjct: 3   SSEKRSKDIMSDIPTFSAENLQNNLKVIQNSRTFLSIIAGVLAGIIGFNGLIGFVFYFVV 62

Query: 68  MAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTYPF 114
           M ITSV L AKAGFS   YF+S N++L DGFLGGLMSFVLFWT+ +
Sbjct: 63  MLITSVGLMAKAGFSADLYFDSWNRVLFDGFLGGLMSFVLFWTFAY 108

[Close]
BLAST of MELO3C015305 vs. NCBI nr
Match: gi|659099503|ref|XP_008450632.1| (PREDICTED: ER membrane protein complex subunit 6 [Cucumis melo])

HSP 1 Score: 221.5 bits (563), Expect = 7.7e-55
Identity = 110/113 (97.35%), Postives = 112/113 (99.12%), Query Frame = 1 

Query: 1   MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG
Sbjct: 1   MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60

Query: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTYPF 114
           FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWT+ +
Sbjct: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTFAY 113

[Close]
BLAST of MELO3C015305 vs. NCBI nr
Match: gi|449435645|ref|XP_004135605.1| (PREDICTED: ER membrane protein complex subunit 6 [Cucumis sativus])

HSP 1 Score: 214.9 bits (546), Expect = 7.2e-53
Identity = 106/113 (93.81%), Postives = 109/113 (96.46%), Query Frame = 1 

Query: 1   MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSSTASDKKSSD ADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFTGLTG
Sbjct: 1   MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTG 60

Query: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTYPF 114
           FIFYFLVMAITSVALAAKAGFSFHSYFESCNQIL DGFL GLMSFVLFWT+ +
Sbjct: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTFAY 113

[Close]
BLAST of MELO3C015305 vs. NCBI nr
Match: gi|700210966|gb|KGN66062.1| (hypothetical protein Csa_1G569390 [Cucumis sativus])

HSP 1 Score: 213.0 bits (541), Expect = 2.7e-52
Identity = 106/110 (96.36%), Postives = 107/110 (97.27%), Query Frame = 1 

Query: 1   MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60
           MAGYSSTASDKKSSD ADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFTGLTG
Sbjct: 1   MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTG 60

Query: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWT 111
           FIFYFLVMAITSVALAAKAGFSFHSYFESCNQIL DGFL GLMSFVLFWT
Sbjct: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWT 110

[Close]
BLAST of MELO3C015305 vs. NCBI nr
Match: gi|1009172447|ref|XP_015867276.1| (PREDICTED: ER membrane protein complex subunit 6-like [Ziziphus jujuba])

HSP 1 Score: 181.0 bits (458), Expect = 1.2e-42
Identity = 88/114 (77.19%), Postives = 103/114 (90.35%), Query Frame = 1 

Query: 1   MAGYS-STASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLT 60
           MAG++ S AS+KKS+++ +D+P FNAEN+Q+N+KIIYYSRTF+SIIGGVIAGILGFT LT
Sbjct: 1   MAGHNDSNASEKKSNEATNDLPTFNAENMQSNMKIIYYSRTFMSIIGGVIAGILGFTSLT 60

Query: 61  GFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTYPF 114
           GFIFYFLVMAITSV L AKAGFS HSYF S NQI+LDGFLGGLMSFVLFWT+ +
Sbjct: 61  GFIFYFLVMAITSVGLTAKAGFSIHSYFSSWNQIVLDGFLGGLMSFVLFWTFAY 114

[Close]
BLAST of MELO3C015305 vs. NCBI nr
Match: gi|720019103|ref|XP_010262003.1| (PREDICTED: ER membrane protein complex subunit 6-like isoform X3 [Nelumbo nucifera])

HSP 1 Score: 180.3 bits (456), Expect = 2.0e-42
Identity = 87/114 (76.32%), Postives = 102/114 (89.47%), Query Frame = 1 

Query: 1   MAGYS-STASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLT 60
           M G+  S AS KKS+DS++D+P FNAENLQNN KIIYYSRTFLSIIGGVIAGILG+TGLT
Sbjct: 1   MVGHEDSGASKKKSTDSSNDLPTFNAENLQNNTKIIYYSRTFLSIIGGVIAGILGYTGLT 60

Query: 61  GFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTYPF 114
           GF+FYFL+MAITS+ LAAKA FS HSYF+  N++LLDGFLGGL+S+VLFWTYP+
Sbjct: 61  GFVFYFLIMAITSLGLAAKAKFSIHSYFDCWNRLLLDGFLGGLLSYVLFWTYPY 114

The following BLAST results are available for this feature:
BLAST of MELO3C015305 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EMC6_HUMAN4.6e-1541.76ER membrane protein complex subunit 6 OS=Homo sapiens GN=EMC6 PE=1 SV=1[more]
EMC6_MOUSE4.6e-1541.76ER membrane protein complex subunit 6 OS=Mus musculus GN=Emc6 PE=1 SV=1[more]
EMC6_XENTR3.0e-1442.86ER membrane protein complex subunit 6 OS=Xenopus tropicalis GN=emc6 PE=3 SV=1[more]
EMC6_XENLA3.9e-1442.86ER membrane protein complex subunit 6 OS=Xenopus laevis GN=emc6 PE=3 SV=1[more]
EMC6_BOVIN5.1e-1440.66ER membrane protein complex subunit 6 OS=Bos taurus GN=EMC6 PE=3 SV=1[more]
BLAST of MELO3C015305 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LZ06_CUCSA1.9e-5296.36Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569390 PE=4 SV=1[more]
V4RXU7_9ROSI4.0e-4276.79Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006078mg PE=4 SV=1[more]
A0A0D2PNT3_GOSRA1.2e-4173.68Uncharacterized protein OS=Gossypium raimondii GN=B456_005G068700 PE=4 SV=1[more]
A0A0B0PFK3_GOSAR1.2e-4173.68Transmembrane 93 OS=Gossypium arboreum GN=F383_07192 PE=4 SV=1[more]
M5XSX3_PRUPE4.4e-4173.68Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013479mg PE=4 SV=1[more]
BLAST of MELO3C015305 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G49540.11.6e-3768.87 Rab5-interacting family protein[more]
BLAST of MELO3C015305 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659099503|ref|XP_008450632.1|7.7e-5597.35PREDICTED: ER membrane protein complex subunit 6 [Cucumis melo][more]
gi|449435645|ref|XP_004135605.1|7.2e-5393.81PREDICTED: ER membrane protein complex subunit 6 [Cucumis sativus][more]
gi|700210966|gb|KGN66062.1|2.7e-5296.36hypothetical protein Csa_1G569390 [Cucumis sativus][more]
gi|1009172447|ref|XP_015867276.1|1.2e-4277.19PREDICTED: ER membrane protein complex subunit 6-like [Ziziphus jujuba][more]
gi|720019103|ref|XP_010262003.1|2.0e-4276.32PREDICTED: ER membrane protein complex subunit 6-like isoform X3 [Nelumbo nucife... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008504Emc6
IPR008504Emc6
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO:0016021integral component of membrane
GO:0072546ER membrane protein complex
GO:0005783endoplasmic reticulum
GO:0016021integral component of membrane
GO:0072546ER membrane protein complex
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0072546 ER membrane protein complex
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU54396melon EST collection version 4.0transcribed_cluster
MU57741melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C015305T1MELO3C015305T1mRNA
MELO3C015305T2MELO3C015305T2mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU54396MU54396transcribed_cluster
MU57741MU57741transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008504ER membrane protein complex subunit 6PANTHERPTHR20994UNCHARACTERIZEDcoord: 8..119
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C015305Csa1G569390Cucumber (Chinese Long) v2cumeB041
MELO3C015305Cla005190Watermelon (97103) v1mewmB264
MELO3C015305ClCG03G017390Watermelon (Charleston Gray)mewcgB240
MELO3C015305Cla97C03G067770Watermelon (97103) v2mewmbB245
MELO3C015305Bhi02G001760Wax gourdmewgoB308
MELO3C015305CSPI01G26450Wild cucumber (PI 183967)cpimeB042
MELO3C015305Cucsa.181900Cucumber (Gy14) v1cgymeB328
MELO3C015305Lsi06G001110Bottle gourd (USVL1VR-Ls)lsimeB396
MELO3C015305CsGy1G025700Cucumber (Gy14) v2cgybmeB038
MELO3C015305CsaV3_1G038810Cucumber (Chinese Long) v3cucmeB042
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C015305Cucurbita pepo (Zucchini)cpemeB084
MELO3C015305Cucurbita pepo (Zucchini)cpemeB331
MELO3C015305Cucurbita pepo (Zucchini)cpemeB622
MELO3C015305Cucurbita pepo (Zucchini)cpemeB748
MELO3C015305Bottle gourd (USVL1VR-Ls)lsimeB105
MELO3C015305Silver-seed gourdcarmeB0249
MELO3C015305Cucumber (Chinese Long) v3cucmeB119
MELO3C015305Cucumber (Chinese Long) v3cucmeB198
MELO3C015305Watermelon (97103) v2mewmbB242
MELO3C015305Watermelon (97103) v2mewmbB260
MELO3C015305Wax gourdmewgoB274
MELO3C015305Wax gourdmewgoB294
MELO3C015305Melon (DHL92) v3.5.1memeB107
MELO3C015305Melon (DHL92) v3.5.1memeB113
MELO3C015305Cucumber (Gy14) v1cgymeB102
MELO3C015305Cucurbita maxima (Rimu)cmameB068
MELO3C015305Cucurbita maxima (Rimu)cmameB122
MELO3C015305Cucurbita maxima (Rimu)cmameB151
MELO3C015305Cucurbita maxima (Rimu)cmameB722
MELO3C015305Cucurbita moschata (Rifu)cmomeB060
MELO3C015305Cucurbita moschata (Rifu)cmomeB110
MELO3C015305Cucurbita moschata (Rifu)cmomeB143
MELO3C015305Cucurbita moschata (Rifu)cmomeB712
MELO3C015305Wild cucumber (PI 183967)cpimeB113
MELO3C015305Cucumber (Chinese Long) v2cumeB112
MELO3C015305Cucumber (Chinese Long) v2cumeB200
MELO3C015305Watermelon (Charleston Gray)mewcgB245
MELO3C015305Watermelon (Charleston Gray)mewcgB237
MELO3C015305Watermelon (97103) v1mewmB282