Cucsa.181900 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.181900
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionTransmembrane 93
Locationscaffold01251 : 112675 .. 116926 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATATTATTTTCTACTTCAACACTTTGGTTCTTTCTTCAACACTCTTCTTTTTGTGATTTCTCCAGTCTACCATTTAACACACCACAAATCGCGTCCTGATTTCGTTCTTCTCCCTCTCCATCACTGCCATTTTCCCTCGCCGGCTCCCCTCCATCTTCCGTTTTCCGGtCTTTTAACTTCAGATCATACGGCGGCAGAATTTATGGCGGGATACTCCTCCACTGCTTCTGACAAGAAATCGTCTGATTTGGCCGACGATATACCGATCTTCAATGCTGAAAATTTGCAAAACAACTTGAAGATCATATATTACAGGTTTTTTCGATGCTTCAATCAACTTTACTTTCTTGTTGATACCGATTGTCTTTTATTCGAATCCTATCAGTTTTCTTAGAATTGGAATCCTTCCGTGATAGACCTAGACCTAGACCTTGTCTTTTCTATTTCTATCTTCTTAATTGACAGCTTATGTAAGTATGGATTTAATTGGTTGACCTAAAATTTTACTGGGTTCTGAACAATCTCGGGATTGTTTGCATTCAAACTGAGTAGCTACTTAATAATGGACTTGATAAGATTTTTATTGATTATTATGATTTTGTTCTTGAGTTTTGTGAATTTAGATTATGAACGTCTACTATCTTTTGCAGCCGGACGTTTTTGTCTATAATTGGTGGAGTAATTGCTGGAGTTTTGGGATTCACTGGCCTGACTGGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCAGTTGCACTTGCAGCTAAGGCTGGATTTTCCTTTCATTCATATTTTGAAAGCTGTAACCAGATTCTATTCGATGGCTTTCTCAGTGGACTTATGGTATGCGTCCTCTGCCCTTATTTTTTAGATTGGACAAAGTTGCGAGACACAACAGAGCACGTGAAATAGGATAATTGAATAATTTTATGTACTTGAATGAAACTGACATCTTTTGATGTTCTATTTTATTTATAAGTGATGAATTTTTAGATCTAATTCTTCTAGGGTGTCTAAGTTACGAATCTTTCTTGTTAATTGCATACATTTGTTCTGTCTTTAGAAGAAATTAGTTACCAAAGGAGAAGACAAGTCACAGTACTATCTTCAATGTTATTGTTCTGGAGGCTAGTCGAGAAAAAGATAGTAAAATTCCATTTCTTTTAGAAGGTAGTATGACGCAAGAAGAGGAAGGCCCAATTCTAAGTTCAATGTTCTTTTTAACCCCCTTGGGATCCATTTTAGGGTGATTCTTATCCTCCTGGCTAGGTTTCGTACATTGTTGATTTTTGGGCAATTTTCACATTCGCTATTAAGGAAAATATAGGCTAATGCAATTTGAATGAGGTTTCACTGGGCATAAGAATTAATGAAGATTTTGAAGAAAATTGTAGTTGAAGGTTATTTGAAAACCTTGTCTAAATAAGATATCTTGGACCCTTGGGTATCAGGAAATCCATTTCTAAATGGATAAGAAAATGGGATAACAATTTGAGTTTGTTTGATTATACTAGTAAGGAAAGGAAATAAAAAAaGATGAGCAAGTTGATTTTAGGCAATGTTGAGGGTTTTCTTTTTTTCTTCCTCTATCACTTGCAACAGGATAGAGGTCTCTAGAGCCTTGGGGTTGGATTGGTTCCAATTCCTACAGAAACTTGGATAGACTGAAAAGCTGGGTtAGATAAATTCCAGTTTTCTTACGACCCTATGTGGTTTTTTTCAAGATTAAGAAAAATCAAAGAAAGGAAGGAGAATTGAAGAAGAAAAAGAGTCAAAGTAGAAACAAAATCATTTTTATTTCTATATCTTGCTTCAAATATTTTTTtCCTCAAGATTATTTGAGTTAATTTCATTCTAACCTTATGTATTTTTCATTTATTATTTTATTAACTGAGCTTCGCTTCAATCTGGCAATGCCTATTGTTGCCTCTTGCCTTGAGGCCATTAAAAAGTTTGTGGCTTCAGAGTGCTCCTTGGACTTTGAAAACACTGAATGGGGTGTATTAGTGCTACTCATGTTTGCTTAATGCGTAGTAAGTTTGGAGCTGTGTACTTCCAGAATTCAGAGGGTAAACCCATATGTAGTTTCAACACTAGCCTAGTCATTGGAAATATTTGTAGGGTGCTAGTTAAGAGAGGTGATGGTCTACCATTTTTTGAAGGTCCAATGTCATTCTTTCCAAGAAAAATTAAATGAGATTCTGCGAAGGTAAAGCTGTAGGGTTTTTCTTCTGTATGGAGAAGTTAGATTAGTCTTTAGTGGGCAGTTTGCATCCTTCATTTTTtCCCCATGTTTGTGTGTGAACATGGCGGTAATATTTAGGCTTCAATGGATTTGAGAGCTCAAAGTTTCGAAGGGAATTGGAGACTTTGGGGCAATGGTGCCTTCAAAAGGCTAATTTCTTTGTCTTATTATGAGAGACCAAGAGTTAAGATTAGAGCAACTAGAGACTTCTTAGGCTGAGTGTCCCTCTTTTTATGGATGTTGTTTGAAGTTTATTTCTCTACATGGATATTGATTGCAATCAAATTGAAGATTTTTAGTATAGGTGGGGTGATAAAATCTTCACTTGAGTAGTTTTCAATTTTCTGCTGCTGTTGATAAGAGTTTCTTCTTCTACTTGGAAGAAAAATGCAAAAGGGGTAACCTGTTCAATATTGCCAAAGCTTTTGAGATTATGTCAGCCCCTAGGCCGTAAGATCAGCTATAAAAAGGTAGTGTTTGGTCGACTGGAGTCCTTTGTTAGGTTTGTTTGGCTCTTTTTGAGGCCTGGATTTTTTACTGGAAAAACGAGGGTTGACCCTTGTTATCTCAAGTTTAAAACGTTAGATAAGGTTTTGAGAAAAATTTCGTCTTTGGTGACACCTTTCTGTTGCATCTTGTGTTGGAGGCCAGATGAAGGGTTGACCTTGAGGCAAGCTGTCACAAATCTTTTAGTGCTTTGGTCGAGGAATTCCTCTTCTATCCGCCGTTTTGGGGTAAGAGAGTTTATATATATATGTATGTGTATATATATATGGGAAGCAGGGATGTGTGTTTtGTTTTtGGGAGGTGGGATTGAGTCTTTTTATGGGGATTTTTTTtATTGCTTTGAATTTTTTtATTTTCTCAATTAAAGTTGGTATATTGTCTAAAAAGCTACAAATGTAGTCATATTCTAGGTTGGTGTAAACGTTTGCTTGCTTAAAGATTTTAGAGGATTTGGAATTTCTGCTGGAATCCAAAAGTGCAAGCATTTTTCTTATGGTATAAGAAGTAAATGAGGTATGGATTGCTCTGGATAGTATTTGAAAGAACTTTTAAGATGCAGCATGGAAATCAAGTGTGTATTTCAAATCCTTGGTGAAAGCGTTAGATAACTCAAAACAAAGGAATGAGAGAAAGAATGAAATTTGGGAGGATTTTCTTATTAATTTAGTGGTCAGATCTCATGGGTTGGCCTAGTGGTAAAAAGGAGTCATAGTCTCAATAACTAACTAAGAGGTCATGGATTCAATCCATGGTGGCCACCTACTTTGGAATTAATTTCCTATTAGTTACCTTGACACCTAAATGTCGTAGGGTCAAGTGAGTTATCCCGTGATATTAGTCGAGGTGCGTGTAAGCTGGTTTGAACACTTACAAATATTAAAAAaTAACAGAAAAGATGTTAGGTTTTGGAGTTTCAATTTCAAGATTCTTACGATCTCCTTTTGTTTCAAGCATATTAATATATTACTGATGTTTCTCAGGTGCTTCCAACCAAATTGCCTAGTTTTTCAGTGAATATTTCTAAAATTTGTTTTTTTTTtCTTTTCAAAATGTTATCCTTGTAACATCAATAAGAGTACAAAATATAATTTTGAACTTAAGTATCACACCCTTTGAGGGATCAATTATCTATTTATGGTCCCTCCTACTTTGGGGTCTGCGCCTTCATCTTTTGGTGGGACTTCTTGAGTTTCAGAAAGCCCAGATTGATCTCTATAATTTTTTCATAGTATAGGGGGACTTAAAATTCTTTATGACATTAGAAAATGTTTGTTTCTCAGCATCCAATAGATACTATGATTGGAAGATTATCTTACACTATATATTATTTGTCTTGTCAATGACTTCTTATTTTTATGTGTTTTGTTATCCAACAACCTATGGACACTAACCCTTTGTTCTAATTTTGCAGTCGTTCGTGCTTTTCTGGACGTATCCTTTACATAACTTTATGGTTTATACAAAGTATTTTTTGCCTTTTATTTCAAATACATAA

mRNA sequence

aaatattattttCTACTTCAACACTTTGGTTCTTTCTTCAACACTCTTCTTTTTGTGATTTCTCCAGTCTACCATTTAACACACCACAAATCGCGTCCTGATTTCGTTCTTCTCCCTCTCCATCACTGCCATTTTCCCTCGCCGGCTCCCCTCCATCTTCCGTTTTCCGGTCTTTTAACTTCAGATCATACGGCGGCAGAATTTATGGCGGGATACTCCTCCACTGCTTCTGACAAGAAATCGTCTGATTTGGCCGACGATATACCGATCTTCAATGCTGAAAATTTGCAAAACAACTTGAAGATCATATATTACAGCCGGACGTTTTTGTCTATAATTGGTGGAGTAATTGCTGGAGTTTTGGGATTCACTGGCCTGACTGGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCAGTTGCACTTGCAGCTAAGGCTGGATTTTCCTTTCATTCATATTTTGAAAGCTGTAACCAGATTCTATTCGATGGCTTTCTCAGTGGACTTATGTCGTTCGTGCTTTTCTGGACGTATCCTTTACATAACTTTATGGTTTATACAAAGTATTTTTTGCCTTTTATTTCAAATACATAA

Coding sequence (CDS)

AAATATTATTTTCTACTTCAACACTTTGGTTCTTTCTTCAACACTCTTCTTTTTGTGATTTCTCCAGTCTACCATTTAACACACCACAAATCGCGTCCTGATTTCGTTCTTCTCCCTCTCCATCACTGCCATTTTCCCTCGCCGGCTCCCCTCCATCTTCCGTTTTCCGGtCTTTTAACTTCAGATCATACGGCGGCAGAATTTATGGCGGGATACTCCTCCACTGCTTCTGACAAGAAATCGTCTGATTTGGCCGACGATATACCGATCTTCAATGCTGAAAATTTGCAAAACAACTTGAAGATCATATATTACAGCCGGACGTTTTTGTCTATAATTGGTGGAGTAATTGCTGGAGTTTTGGGATTCACTGGCCTGACTGGATTTATATTTTATTTCCTAGTCATGGCAATTACTTCAGTTGCACTTGCAGCTAAGGCTGGATTTTCCTTTCATTCATATTTTGAAAGCTGTAACCAGATTCTATTCGATGGCTTTCTCAGTGGACTTATGTCGTTCGTGCTTTTCTGGACGTATCCTTTACATAACTTTATGGTTTATACAAAGTATTTTTTGCCTTTTATTTCAAATACATAA

Protein sequence

KYYFLLQHFGSFFNTLLFVISPVYHLTHHKSRPDFVLLPLHHCHFPSPAPLHLPFSGLLTSDHTAAEFMAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTYPLHNFMVYTKYFLPFISNT*
Homology
[Close]
BLAST of Cucsa.181900 vs. Swiss-Prot
Match: EMC6_HUMAN (ER membrane protein complex subunit 6 OS=Homo sapiens GN=EMC6 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.7e-14
Identity = 36/91 (39.56%), Postives = 54/91 (59.34%), Query Frame = 1 

Query: 89  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAG 148
           P  +   ++ N  ++ Y RT +S + G  AG+LG TGL GFIFY L   + S+ L  KAG
Sbjct: 12  PFISEAAVRGNAAVLDYCRTSVSALSGATAGILGLTGLYGFIFYLLASVLLSLLLILKAG 71

Query: 149 FSFHSYFESCNQILFDGFLSGLMSFVLFWTY 180
             ++ YF+S   +   G + GL ++VLFWT+
Sbjct: 72  RRWNKYFKSRRPLFTGGLIGGLFTYVLFWTF 102

[Close]
BLAST of Cucsa.181900 vs. Swiss-Prot
Match: EMC6_MOUSE (ER membrane protein complex subunit 6 OS=Mus musculus GN=Emc6 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.7e-14
Identity = 36/91 (39.56%), Postives = 54/91 (59.34%), Query Frame = 1 

Query: 89  PIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAG 148
           P  +   ++ N  ++ Y RT +S + G  AG+LG TGL GFIFY L   + S+ L  KAG
Sbjct: 12  PFISEAAVRGNAAVLDYCRTSVSALSGATAGILGLTGLYGFIFYLLASVLLSLLLILKAG 71

Query: 149 FSFHSYFESCNQILFDGFLSGLMSFVLFWTY 180
             ++ YF+S   +   G + GL ++VLFWT+
Sbjct: 72  RRWNKYFKSRRPLFTGGLIGGLFTYVLFWTF 102

[Close]
BLAST of Cucsa.181900 vs. Swiss-Prot
Match: EMC6_DICDI (ER membrane protein complex subunit 6 OS=Dictyostelium discoideum GN=emc6 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.3e-13
Identity = 35/97 (36.08%), Postives = 55/97 (56.70%), Query Frame = 1 

Query: 91  FNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFS 150
           +  E +Q N K + + +  +SI+GG IAGV+GF+G+ GF+FYF +          K   +
Sbjct: 27  YEMEYIQRNNKTVSFCQIPISILGGAIAGVIGFSGVYGFLFYFFIYITFCSLFTLKENKN 86

Query: 151 FHSYFESCNQILFDGFLSGLMSFVLFWTYPLHNFMVY 188
            H YF +   I FD   +GLM ++LFWT+  +   +Y
Sbjct: 87  LHLYFPNPRSIWFDSIGAGLMPYILFWTFLYNIIHIY 123

[Close]
BLAST of Cucsa.181900 vs. Swiss-Prot
Match: EMC6_XENTR (ER membrane protein complex subunit 6 OS=Xenopus tropicalis GN=emc6 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.3e-13
Identity = 34/84 (40.48%), Postives = 52/84 (61.90%), Query Frame = 1 

Query: 96  LQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYF 155
           ++ N  ++ Y RT +S + G  AG+LG T L GFIFYFL   + S+ L  K+G  ++ YF
Sbjct: 19  VRGNAAVLDYCRTSVSALSGATAGILGLTALYGFIFYFLASFLLSLLLVLKSGRKWNKYF 78

Query: 156 ESCNQILFDGFLSGLMSFVLFWTY 180
           +S   +   G + GL ++VLFWT+
Sbjct: 79  KSRKPLFTGGLIGGLFTYVLFWTF 102

[Close]
BLAST of Cucsa.181900 vs. Swiss-Prot
Match: EMC6_XENLA (ER membrane protein complex subunit 6 OS=Xenopus laevis GN=emc6 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.7e-13
Identity = 34/84 (40.48%), Postives = 52/84 (61.90%), Query Frame = 1 

Query: 96  LQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLVMAITSVALAAKAGFSFHSYF 155
           ++ N  ++ Y RT +S + G  AG+LG T L GFIFYFL   + S+ L  K+G  ++ YF
Sbjct: 19  VRGNAAVLDYCRTSVSALSGATAGILGLTSLYGFIFYFLASFLLSLLLVLKSGRKWNKYF 78

Query: 156 ESCNQILFDGFLSGLMSFVLFWTY 180
           +S   +   G + GL ++VLFWT+
Sbjct: 79  KSRKPLFTGGLVGGLFTYVLFWTF 102

[Close]
BLAST of Cucsa.181900 vs. TrEMBL
Match: A0A0A0LZ06_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569390 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.7e-54
Identity = 112/114 (98.25%), Postives = 112/114 (98.25%), Query Frame = 1 

Query: 69  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTG 128
           MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTG
Sbjct: 1   MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTG 60

Query: 129 FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTYPLH 183
           FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWT P H
Sbjct: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWT-PRH 113

[Close]
BLAST of Cucsa.181900 vs. TrEMBL
Match: V4RXU7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006078mg PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.5e-41
Identity = 85/117 (72.65%), Postives = 101/117 (86.32%), Query Frame = 1 

Query: 67  EFMAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGL 126
           E MA +S + + KKS+D+++D+ IFNAENLQ+N+K+IYYSRTFLSIIGGVIAG+LGFTGL
Sbjct: 42  EDMATHSDSVAGKKSNDVSNDLQIFNAENLQSNMKVIYYSRTFLSIIGGVIAGILGFTGL 101

Query: 127 TGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTYPLHN 184
            GF+FYFL+MAITSV L AKA FS HSYF+S N+IL DGFL GLMSFVLFWTYP  N
Sbjct: 102 MGFVFYFLIMAITSVCLMAKAKFSVHSYFDSWNRILLDGFLGGLMSFVLFWTYPSKN 158

[Close]
BLAST of Cucsa.181900 vs. TrEMBL
Match: V4TZX7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006078mg PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 6.5e-40
Identity = 82/113 (72.57%), Postives = 99/113 (87.61%), Query Frame = 1 

Query: 67  EFMAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGL 126
           E MA +S + + KKS+D+++D+ IFNAENLQ+N+K+IYYSRTFLSIIGGVIAG+LGFTGL
Sbjct: 42  EDMATHSDSVAGKKSNDVSNDLQIFNAENLQSNMKVIYYSRTFLSIIGGVIAGILGFTGL 101

Query: 127 TGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY 180
            GF+FYFL+MAITSV L AKA FS HSYF+S N+IL DGFL GLMSFVLFWT+
Sbjct: 102 MGFVFYFLIMAITSVCLMAKAKFSVHSYFDSWNRILLDGFLGGLMSFVLFWTF 154

[Close]
BLAST of Cucsa.181900 vs. TrEMBL
Match: V4S1H0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006078mg PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-39
Identity = 81/111 (72.97%), Postives = 98/111 (88.29%), Query Frame = 1 

Query: 69  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTG 128
           MA +S + + KKS+D+++D+ IFNAENLQ+N+K+IYYSRTFLSIIGGVIAG+LGFTGL G
Sbjct: 1   MATHSDSVAGKKSNDVSNDLQIFNAENLQSNMKVIYYSRTFLSIIGGVIAGILGFTGLMG 60

Query: 129 FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY 180
           F+FYFL+MAITSV L AKA FS HSYF+S N+IL DGFL GLMSFVLFWT+
Sbjct: 61  FVFYFLIMAITSVCLMAKAKFSVHSYFDSWNRILLDGFLGGLMSFVLFWTF 111

[Close]
BLAST of Cucsa.181900 vs. TrEMBL
Match: B9HIL0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s10180g PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-39
Identity = 82/111 (73.87%), Postives = 98/111 (88.29%), Query Frame = 1 

Query: 69  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTG 128
           MAG++   S+KKSSD  DD+  F AENLQ+N+K+IYYSRTFLSIIGGV+AG+LGFTGLTG
Sbjct: 1   MAGHNE--SEKKSSDALDDLQTFRAENLQSNMKVIYYSRTFLSIIGGVVAGILGFTGLTG 60

Query: 129 FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY 180
           F+FYFLVMAITSVAL AKA FS H+YF+S N+++FDGFL GLMSFVLFWT+
Sbjct: 61  FVFYFLVMAITSVALIAKAKFSIHTYFDSWNRVVFDGFLGGLMSFVLFWTF 109

[Close]
BLAST of Cucsa.181900 vs. TAIR10
Match: AT5G49540.1 (AT5G49540.1 Rab5-interacting family protein)

HSP 1 Score: 152.9 bits (385), Expect = 2.1e-37
Identity = 72/104 (69.23%), Postives = 87/104 (83.65%), Query Frame = 1 

Query: 76  ASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGFIFYFLV 135
           +S+K+S D+  DIP F+AENLQNNLK+I  SRTFLSII GV+AG++GF GL GF+FYF+V
Sbjct: 3   SSEKRSKDIMSDIPTFSAENLQNNLKVIQNSRTFLSIIAGVLAGIIGFNGLIGFVFYFVV 62

Query: 136 MAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY 180
           M ITSV L AKAGFS   YF+S N++LFDGFL GLMSFVLFWT+
Sbjct: 63  MLITSVGLMAKAGFSADLYFDSWNRVLFDGFLGGLMSFVLFWTF 106

[Close]
BLAST of Cucsa.181900 vs. NCBI nr
Match: gi|449435645|ref|XP_004135605.1| (PREDICTED: ER membrane protein complex subunit 6 [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 2.3e-54
Identity = 110/111 (99.10%), Postives = 111/111 (100.00%), Query Frame = 1 

Query: 69  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTG 128
           MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTG
Sbjct: 1   MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTG 60

Query: 129 FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY 180
           FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWT+
Sbjct: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTF 111

[Close]
BLAST of Cucsa.181900 vs. NCBI nr
Match: gi|700210966|gb|KGN66062.1| (hypothetical protein Csa_1G569390 [Cucumis sativus])

HSP 1 Score: 219.9 bits (559), Expect = 3.9e-54
Identity = 112/114 (98.25%), Postives = 112/114 (98.25%), Query Frame = 1 

Query: 69  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTG 128
           MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTG
Sbjct: 1   MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTG 60

Query: 129 FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTYPLH 183
           FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWT P H
Sbjct: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWT-PRH 113

[Close]
BLAST of Cucsa.181900 vs. NCBI nr
Match: gi|659099503|ref|XP_008450632.1| (PREDICTED: ER membrane protein complex subunit 6 [Cucumis melo])

HSP 1 Score: 214.2 bits (544), Expect = 2.1e-52
Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 1 

Query: 69  MAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTG 128
           MAGYSSTASDKKSSD ADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAG+LGFTGLTG
Sbjct: 1   MAGYSSTASDKKSSDSADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGILGFTGLTG 60

Query: 129 FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTY 180
           FIFYFLVMAITSVALAAKAGFSFHSYFESCNQIL DGFL GLMSFVLFWT+
Sbjct: 61  FIFYFLVMAITSVALAAKAGFSFHSYFESCNQILLDGFLGGLMSFVLFWTF 111

[Close]
BLAST of Cucsa.181900 vs. NCBI nr
Match: gi|567852337|ref|XP_006419332.1| (hypothetical protein CICLE_v10006078mg [Citrus clementina])

HSP 1 Score: 177.6 bits (449), Expect = 2.2e-41
Identity = 85/117 (72.65%), Postives = 101/117 (86.32%), Query Frame = 1 

Query: 67  EFMAGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGL 126
           E MA +S + + KKS+D+++D+ IFNAENLQ+N+K+IYYSRTFLSIIGGVIAG+LGFTGL
Sbjct: 42  EDMATHSDSVAGKKSNDVSNDLQIFNAENLQSNMKVIYYSRTFLSIIGGVIAGILGFTGL 101

Query: 127 TGFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTYPLHN 184
            GF+FYFL+MAITSV L AKA FS HSYF+S N+IL DGFL GLMSFVLFWTYP  N
Sbjct: 102 MGFVFYFLIMAITSVCLMAKAKFSVHSYFDSWNRILLDGFLGGLMSFVLFWTYPSKN 158

[Close]
BLAST of Cucsa.181900 vs. NCBI nr
Match: gi|720019103|ref|XP_010262003.1| (PREDICTED: ER membrane protein complex subunit 6-like isoform X3 [Nelumbo nucifera])

HSP 1 Score: 177.6 bits (449), Expect = 2.2e-41
Identity = 85/116 (73.28%), Postives = 100/116 (86.21%), Query Frame = 1 

Query: 69  MAGYS-STASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLT 128
           M G+  S AS KKS+D ++D+P FNAENLQNN KIIYYSRTFLSIIGGVIAG+LG+TGLT
Sbjct: 1   MVGHEDSGASKKKSTDSSNDLPTFNAENLQNNTKIIYYSRTFLSIIGGVIAGILGYTGLT 60

Query: 129 GFIFYFLVMAITSVALAAKAGFSFHSYFESCNQILFDGFLSGLMSFVLFWTYPLHN 184
           GF+FYFL+MAITS+ LAAKA FS HSYF+  N++L DGFL GL+S+VLFWTYP HN
Sbjct: 61  GFVFYFLIMAITSLGLAAKAKFSIHSYFDCWNRLLLDGFLGGLLSYVLFWTYPYHN 116

The following BLAST results are available for this feature:
BLAST of Cucsa.181900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EMC6_HUMAN6.7e-1439.56ER membrane protein complex subunit 6 OS=Homo sapiens GN=EMC6 PE=1 SV=1[more]
EMC6_MOUSE6.7e-1439.56ER membrane protein complex subunit 6 OS=Mus musculus GN=Emc6 PE=1 SV=1[more]
EMC6_DICDI4.3e-1336.08ER membrane protein complex subunit 6 OS=Dictyostelium discoideum GN=emc6 PE=3 S... [more]
EMC6_XENTR4.3e-1340.48ER membrane protein complex subunit 6 OS=Xenopus tropicalis GN=emc6 PE=3 SV=1[more]
EMC6_XENLA5.7e-1340.48ER membrane protein complex subunit 6 OS=Xenopus laevis GN=emc6 PE=3 SV=1[more]
BLAST of Cucsa.181900 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LZ06_CUCSA2.7e-5498.25Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569390 PE=4 SV=1[more]
V4RXU7_9ROSI1.5e-4172.65Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006078mg PE=4 SV=1[more]
V4TZX7_9ROSI6.5e-4072.57Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006078mg PE=4 SV=1[more]
V4S1H0_9ROSI1.1e-3972.97Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006078mg PE=4 SV=1[more]
B9HIL0_POPTR1.1e-3973.87Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s10180g PE=4 SV=1[more]
BLAST of Cucsa.181900 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G49540.12.1e-3769.23 Rab5-interacting family protein[more]
BLAST of Cucsa.181900 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435645|ref|XP_004135605.1|2.3e-5499.10PREDICTED: ER membrane protein complex subunit 6 [Cucumis sativus][more]
gi|700210966|gb|KGN66062.1|3.9e-5498.25hypothetical protein Csa_1G569390 [Cucumis sativus][more]
gi|659099503|ref|XP_008450632.1|2.1e-5295.50PREDICTED: ER membrane protein complex subunit 6 [Cucumis melo][more]
gi|567852337|ref|XP_006419332.1|2.2e-4172.65hypothetical protein CICLE_v10006078mg [Citrus clementina][more]
gi|720019103|ref|XP_010262003.1|2.2e-4173.28PREDICTED: ER membrane protein complex subunit 6-like isoform X3 [Nelumbo nucife... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008504Emc6
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO:0016021integral component of membrane
GO:0072546ER membrane protein complex
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0072546 ER membrane protein complex
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.181900.1Cucsa.181900.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008504ER membrane protein complex subunit 6PANTHERPTHR20994UNCHARACTERIZEDcoord: 76..178
score: 1.9