MELO3C015270.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C015270.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionsingle-stranded DNA-binding protein, mitochondrial
Locationchr02 : 438090 .. 443736 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTTCTACCCTGATCGAATCGTCGCTTCCATTTCTGCTCTTTAACAATCAACATGAACTCAGTCACAGTGAGACTCCTCAACCGTTTCAGAATTCCTTCTTCAAATTCTCCCACATCTTCATTTGGTAACTCTCTTTCTCTCTGTCTCACTTTGTTAATTAACGTCTATGTTCTTTCTGTTATTACGACTTGCTTTCGGTTCAGAGCTGAAGGAATTTTGTTTACTATTTTTTTTTTGTTTTGAGTGGCCCAACCAAGAATTTGGCTGTTTTGTGTATTGGGTTTGTTTATCTCAGTGCAATATGTGTGCTGGAGTGATGGCTTGAATAATTATTCAACGTTTGGTTGTAGTGGCAAGTACGCAAACAAGCTCGAAGTTTTGGTTATCCACCGGTGCTTCTGAAAGTGACGTCGATATTGAGAAGAACGATGGAGGAGACGATGATTATGATGCATTTTCTAATGAATTACAACCCCAGGGTGTTGATCCCAGTCGAGGTTGGGGATATCGAGGCGTACATAAGGTATCTCCTCTTTGTCTAAGATGTGTTCCATTTTTTAAAGTTGCGATTTGGAATCTTGTATGCTGGGAATTTTACCCAATAAGTGATCTTTCTGTTCTTGTGATGGTACTTTGTGTATTTTTTGTGATAGTTTTACTTTTTTCAGATTCACGAACTATCCAAAATAAACGACGAAACAGCTCACTTTTTTTTTTTATTTCTTGTTCTTAGAAAATGTGCCTAATCACTTGCCTTCTCTTGTTGATAAGTTTTGAAGGAAATCTGATGTGTAAGAGAAGCCTCTTGCGTACTATGCGTATTTTAGAAATAATAAGAAGCGGGGGTAGCAATTAAGTGAGTAAGTTTTGTGAGCAATGGCAAGAACAGAAAACTTAGGTGGCTAGAGCTTGAACTTTGAAGTCTGATGTAAGAGAGTAGGAATAACGAATATATGTGTTATATATTGTAAAATTCCAGGTGAGCAAGGAGAACGAGTAGTTTCTTAGCTAGGGAAAGTCTTGTGATTGAGACTTAAGAGGAATGATAGGCAACAAGCAGACTGAGTGTAGGAGAAACTTGCCTCTGGAACTTCAATTGTTCTGGAATCTTCCCCAATAGTGAAAGAGTTATTCTCACATGATAATTGGATTCATAATCTGCTATTTCTAGACAAATTAGACTGATTATTCTGTTTTACAACGTGATCAAATGTTCACAGGCAATAATTTGTGGAAGGGTTGGGCAAGCCCCTGTGCAGAAGATCTTGAGAAATGGGCGGACGATAACAATCTTTACTGTTGGAACAGGAGGGATGTATGACCAACGAATTGTTGATGGAAGAGGTCTGCCGAAGCCTGCTCAGTGGCATCGTATTGCTGTGCATAATGAACTACTTGGTGCTTATGCAGTTCAAAAACTTTGTAAAAAGTATGATTTGAACCGCTCTTAATAACTGATTTGACTGTATAATTTCACTGACTCTCCGTGGACTTTCAGCGCGTCGGTTTATGTTGAGGGTGACATTGAGACCAGAGTCTACAATGACAGCATCAATGGCGAAGTGAAAAATATTCCAGAAATATGTGTTCGACGTGATGGTATTGCAACACATACTATTATCTTTTTATTTCCTTTTCAATTTTCTTTGGAACTAGTTGAACACTTAATTAATATGAAGTCGTCATTTGGTAACTTCTCTGTTTTCTGCATCTACTTCATTATTTCTTAAATGTCATTTTGAGCACATATTAGAGGGTGTTATTTGACCTTCATAATCATAAGGTTAAGTTATCATATTAATTCCTGTCATTTGTACTTTAGACTTTCCTTTTATTTAAAAACGAACACCATCTTTTTAATAAAGTTTAGTTTTATTGTTTAATAAAGAGAGAGAAAGAGAGATGAGATTCCGATCATCGTTGTCCTCCCCTCCCCCGGCTCCCCACAGCTTACGATATTTCCTCTCCTGATCAACAATGATGAATTCAAGACAGCTCTCAACGAAAATTGAGAATAAATTCTTTACTTGTGAGCTCAATAGAAATAGCAAAGGGAGGGTGATCCGCATATCTGAAACTTGTGGAACATTTTGAAATAGCAAAGGGAGGGCCTTTTTGATTTGGGGTGTCTTTAACTCTCAAGTCCTCTAGCTTAGATGGTATGATTGGAGAGTTTTATAAAAAATCGTGGAACATTTTGAGTAAGGGTGTTCCAACATTTTTTTTAAAATGGAATCATTAATAGAAGGTGCAATGAAACTTATGATAGTCTCATTCCCAAAAAGAAAGAGGTTGTTTGTGTTAGTGACTTCAGACCCATGAGCCTCATAACCTCCTTGTATAAAGTCATCTCTAAGGTGCTTGCGACGAGACTTAAAAAGGTCCTTCCTTCAATAATTAGCGATACTCAAATGGCTTTTGTGGAAGGGAGGCAAATTTTCTTGATGCAATTTTAATAGCTTCGGTGGCCATAGATGAATGGTTTTTAAAAGGCATAAAAGGTTTTCTTTTGAAGCTTGACCTTGAGAAAGCCTACGACAAGGTGGATTGGTCCTTTCTCGATATGGCTATGAAGCTTAAAGACTTTGGTAAGAAATGGAGGAGATGGATTTGGGCTGCTTATCAATGACTAATTTCTCGATCATTGTCAACGACAGGCCTAAGGGAAAGGTATTTGCCAAAAGGGGCATTCATTAGGAAGATCCACTTGCCCCTTTTCTTTTTACGATTGTGGTAGACACCTTTAGTTGTCTTATTCATTACTGTAACGAGAAGGACCATTAAAGGTTTCCATTTCGATAATCTTCCAGGTGATTTAACCTCCTTCAGTACGTGGACGATACCCTTATCTTTTCCTCATGGGAGGATGGAAATCTGGAGGCTTGGTGGAGGGTGATTATTATCTTTCTCTTGGGAGCTAGTTTGCTCCTTCATGGTGCCAAAACGTCATTAATACCTTGACAGTGCCGATCTGGTTCTTTGGGTTGTATGGTCGATACTCTCCCCTTTAATTACTTGAGTTTCTCTTCTGGAGGGGCCCACAATAGGAAAGAGGCTTTAATTTCTCTTGAGGAGCGGTTTAGGTATAAAATTGATAGATGAAGGAATGTCTCTCCAAAGGTGGTAGATTAACTCTTGCGTAGTTAGTATTGAATACTCTTCCTTGTTATCTGATCTCTCTCGTGCAAGCCTCAGTTGGTGTTATCAATCGAATGGAGAAGATGATCAGGGGTTTTGTCTGGACGGGGGACAACTAAATCGGTTGCCCACCTTGTCAAGTGGGATACTACCTCTCGCCCGATTTGTTATGGCGGCCTTGGGATTGGTTCTTTTAGGCAAAAGAATAATGCTCTTCTCATCAAATGGCTGTGAAGATTTAGTAAGGAAGACAATGCTTTATGGAGACGTTTAATTGTGGCCATCTACGACTTAGAAGAGAATGGTTGGTCTACTAAAGCTTCGAACAGGGGAAGGTCTTATAGGTTATGGGCTGGCATTCTGAAATACAAGGAGATGTTCTTTAATTTCTCGGCCTTTTTGTTGGGAGAGGGAACAAAAATCAGATTTTGGAACTATAGTTGGTGTGAGGCTCAACCCTTGGCAGAAGAATTTCCTGATTTGTTTTCCATTGCGCTGAACAAGGATGCTGATTGATGGTGTAATGTTAGTCACTCTTGGAATTTGGGTCTTTGAAGAAATGTGCCAGATAATGAACTTGACAACGTGGCCACCATTTTGGAAACTCTTCATTCGTGGGCCCCAAACGGATGATTGTGATAGCCTTAAATGGAATCTTATTGCGAAGTCTACCTTTCTTAAATTAACCAAAAGACCCCCCACCATCACTGCACCACTAGTTCATTACATTTGGAAGGTTAAAATTCTGAAAAATGTGAAGTTCTTCTAATGGTCGCTCGCTTATAGAAGTCTTTATTGAAAGTAGAGACAAAGAACACACAAATTTATATGGAAACCCTAGTATAGAGACAAAAACCATGGTGCTAAAGATCTTATTATTTTCTCATAATTCATAAAGGTACAAAGTGGGGAAATTTATAGGCAACACGAGCTTAATTAAAAGAATAAAAAATTAGGGCAAAGTAAATCTTAACTATCTATGGGCTTTCATCATGACCTAAGCCTATTATTTCTAACGGTCTACCACCCAAGAGAAACTTAAAAAAAATTACAGTACATTGAGCTCAGTCCCTCAATATGCTGCCTTTGCTTCAAAGATGAGGAGACCTTGGACTATTTTTTTTTTTGCATTGTATCTGTTCTAGGAAAGCTTGGAATACTCTTTATTCGGAAATTTGTTTTTCTTAGTTGGATGCTTGAAGGGCTCAATAGTAGATGGTTTAGTTCGAAGGGTAACATTTTATGTAGATGGGCTATCCGTTCCCTCTTGTGGTATATTTGGAAAGATAGGAATAGTGTAATTTTTTAAGACAACTATAATTCTTTTGATTCTTTTTGGACTGCGTTTCAACCCATTGCTTCTTGGTGGAGTACGAATTACATTAAACACTTTTGTAATTATAGTCTTTCTATGATTTTCAACAATTGGAAGTCCCTTATTCTTCAATTTTTCTCTGGGAGGGCCCTCTTGTCCCTTGCCCTTAGGCTATTCTCATTGGTTCTTTGAATATATTTGTTTCTTATTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAATCTTTTTATTTTGTTTGATTTTCCAAAATGTCTCTAGTATAACAAAAAGTTGACAGTTACTTTACATGACACATTTTTCTTGGACATTAGCACATTTTCTTTGAATGTGAATCATGTGACAGAGAAGTGATGAGTTGTAGTCTAAAGATGGTATCAAGTTAGAAAAAAACTACCAGCATGTGGTAAACTCATAGGCATTTTTGAAATACTGACCCAACGAATTGTAAAAAAAACTAGCCATAGAGACAAAAATAATAATTTATCCTCTAGCCTTAATACGGTGCAAACAGAAAATTACTTACAACCAAGCACAGATAATACTATTGTTACATGTTGGTTCAAATGTCTTCTGTAAAACATATGATTTGGGACTCCTTTTAACTGCCATGCTTCATTTTTGCAGGGATGCTTCACCTTTTAAAACCTGGAGAAAGTGCCAGCAATTTGTCTTTAGACGATTTGAGTGAGTTTTCCCGTTAACATTTTGTTTATTTGATCACTAACCATGGTAGCAATGCAGTGCATGAAAACTTTTTCATTCTCTGTCAATCTGAGGTGTTGATTTTTTTATGTTTTTGTGACTGACAGAAGAAAGGTTGTTTTCGAACGAGACATAACATATTTTCCAAAAACCTCAATCAGTTGAAGTTTGTGTAGGGGCCCGAGAGAGATGCTGTTAATCGTCATTCAAAGATTGAGCCATGGTTGAGTACTGAACCACCAATCCCTTGTAATCTCTTTCATGTAATTGTTTATTGACATTGTAGCATTTTTTTTCTTCGAGGCTTTAAGCCACTTTTGTGTTGGATTGGTGAGGGATTTTATAGTTCACTAGAGCTGTCACTGCTTCATCCCTTTAATCTTTCTTTAAATGCACTTCTAACAATGAAAGGCATCATAACTTGAAATCCACGGATTAGACATAGTTCAATAGTCATTCACAAGTTTGTTTA

mRNA sequence

CCTTCTACCCTGATCGAATCGTCGCTTCCATTTCTGCTCTTTAACAATCAACATGAACTCAGTCACAGTGAGACTCCTCAACCGTTTCAGAATTCCTTCTTCAAATTCTCCCACATCTTCATTTGTGGCAAGTACGCAAACAAGCTCGAAGTTTTGGTTATCCACCGGTGCTTCTGAAAGTGACGTCGATATTGAGAAGAACGATGGAGGAGACGATGATTATGATGCATTTTCTAATGAATTACAACCCCAGGGTGTTGATCCCAGTCGAGGTTGGGGATATCGAGGCGTACATAAGGCAATAATTTGTGGAAGGGTTGGGCAAGCCCCTGTGCAGAAGATCTTGAGAAATGGGCGGACGATAACAATCTTTACTGTTGGAACAGGAGGGATGTATGACCAACGAATTGTTGATGGAAGAGGTCTGCCGAAGCCTGCTCAGTGGCATCGTATTGCTGTGCATAATGAACTACTTGGTGCTTATGCAGTTCAAAAACTTTGTAAAAACGCGTCGGTTTATGTTGAGGGTGACATTGAGACCAGAGTCTACAATGACAGCATCAATGGCGAAGTGAAAAATATTCCAGAAATATGTGTTCGACGTGATGGGATGCTTCACCTTTTAAAACCTGGAGAAAGTGCCAGCAATTTGTCTTTAGACGATTTGAAAGAAAGGTTGTTTTCGAACGAGACATAACATATTTTCCAAAAACCTCAATCAGTTGAAGTTTGTGTAGGGGCCCGAGAGAGATGCTGTTAATCGTCATTCAAAGATTGAGCCATGGTTGAGTACTGAACCACCAATCCCTTGTAATCTCTTTCATGTAATTGTTTATTGACATTGTAGCATTTTTTTTCTTCGAGGCTTTAAGCCACTTTTGTGTTGGATTGGTGAGGGATTTTATAGTTCACTAGAGCTGTCACTGCTTCATCCCTTTAATCTTTCTTTAAATGCACTTCTAACAATGAAAGGCATCATAACTTGAAATCCACGGATTAGACATAGTTCAATAGTCATTCACAAGTTTGTTTA

Coding sequence (CDS)

ATGAACTCAGTCACAGTGAGACTCCTCAACCGTTTCAGAATTCCTTCTTCAAATTCTCCCACATCTTCATTTGTGGCAAGTACGCAAACAAGCTCGAAGTTTTGGTTATCCACCGGTGCTTCTGAAAGTGACGTCGATATTGAGAAGAACGATGGAGGAGACGATGATTATGATGCATTTTCTAATGAATTACAACCCCAGGGTGTTGATCCCAGTCGAGGTTGGGGATATCGAGGCGTACATAAGGCAATAATTTGTGGAAGGGTTGGGCAAGCCCCTGTGCAGAAGATCTTGAGAAATGGGCGGACGATAACAATCTTTACTGTTGGAACAGGAGGGATGTATGACCAACGAATTGTTGATGGAAGAGGTCTGCCGAAGCCTGCTCAGTGGCATCGTATTGCTGTGCATAATGAACTACTTGGTGCTTATGCAGTTCAAAAACTTTGTAAAAACGCGTCGGTTTATGTTGAGGGTGACATTGAGACCAGAGTCTACAATGACAGCATCAATGGCGAAGTGAAAAATATTCCAGAAATATGTGTTCGACGTGATGGGATGCTTCACCTTTTAAAACCTGGAGAAAGTGCCAGCAATTTGTCTTTAGACGATTTGAAAGAAAGGTTGTTTTCGAACGAGACATAA

Protein sequence

MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAFSNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIVDGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEICVRRDGMLHLLKPGESASNLSLDDLKERLFSNET
Homology
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BLAST of MELO3C015270.2 vs. NCBI nr
Match: XP_008450570.1 (PREDICTED: single-stranded DNA-binding protein, mitochondrial [Cucumis melo])

HSP 1 Score: 433.3 bits (1113), Expect = 4.7e-118
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0 

Query: 1   MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF
Sbjct: 1   MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60

Query: 61  SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV 120
           SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV
Sbjct: 61  SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV 120

Query: 121 DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI 180
           DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI
Sbjct: 121 DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI 180

Query: 181 CVRRDGMLHLLKPGESASNLSLDDLKERLFSNET 215
           CVRRDGMLHLLKPGESASNLSLDDLKERLFSNET
Sbjct: 181 CVRRDGMLHLLKPGESASNLSLDDLKERLFSNET 214

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BLAST of MELO3C015270.2 vs. NCBI nr
Match: XP_004135584.1 (PREDICTED: single-stranded DNA-binding protein, mitochondrial [Cucumis sativus] >KGN66025.1 hypothetical protein Csa_1G568540 [Cucumis sativus])

HSP 1 Score: 394.4 bits (1012), Expect = 2.4e-106
Identity = 193/214 (90.19%), Postives = 200/214 (93.46%), Query Frame = 0 

Query: 1   MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           MNSV +R LNRFR PSSN PTSSFVAS QTSSKFWLSTGASE D D+EKNDG +DDYD F
Sbjct: 1   MNSVAMRFLNRFRTPSSNFPTSSFVASAQTSSKFWLSTGASEGDNDVEKNDGEEDDYDTF 60

Query: 61  SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV 120
           SNELQPQGVDP+RGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRI 
Sbjct: 61  SNELQPQGVDPTRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIF 120

Query: 121 DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI 180
           DGR LPKPAQWHRIAVHNELLGAYAVQKLC+NASVYVEGDIETRVYNDSINGEVKNIPEI
Sbjct: 121 DGRDLPKPAQWHRIAVHNELLGAYAVQKLCRNASVYVEGDIETRVYNDSINGEVKNIPEI 180

Query: 181 CVRRDGMLHLLKPGESASNLSLDDLKERLFSNET 215
           CVRRDG L LLKPGESASN+SLDDLKE LFSN+T
Sbjct: 181 CVRRDGTLRLLKPGESASNISLDDLKEGLFSNKT 214

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BLAST of MELO3C015270.2 vs. NCBI nr
Match: XP_022968788.1 (single-stranded DNA-binding protein, mitochondrial [Cucurbita maxima] >XP_022968789.1 single-stranded DNA-binding protein, mitochondrial [Cucurbita maxima])

HSP 1 Score: 337.4 bits (864), Expect = 3.5e-89
Identity = 169/217 (77.88%), Postives = 187/217 (86.18%), Query Frame = 0 

Query: 1   MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           MN+V +R L  FRI      +SSFVAS QTSSK WLSTGAS S +D+EKN+G +++YD F
Sbjct: 1   MNAVAMRFLKHFRI------SSSFVASRQTSSKLWLSTGASGSGIDVEKNNGEEEEYDDF 60

Query: 61  SN---ELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQ 120
            N   ELQPQGVDP RGWG+RGVHKAIICGR+GQAPVQKILRNGRTITIFTVGTGGM+DQ
Sbjct: 61  FNDKIELQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQ 120

Query: 121 RIVDGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNI 180
           RIV+ + LPKPAQWHRIAVHNE LGAYAVQ+L KNASVYVEGDIETRVYNDSINGEVKN+
Sbjct: 121 RIVEAKDLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNV 180

Query: 181 PEICVRRDGMLHLLKPGESASNLSLDDLKERLFSNET 215
           PEICVRRDG + LLK GESASN+SLDDLKE LF NET
Sbjct: 181 PEICVRRDGKIRLLKAGESASNISLDDLKEGLFQNET 211

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BLAST of MELO3C015270.2 vs. NCBI nr
Match: XP_022135640.1 (single-stranded DNA-binding protein, mitochondrial [Momordica charantia])

HSP 1 Score: 335.9 bits (860), Expect = 1.0e-88
Identity = 167/213 (78.40%), Postives = 183/213 (85.92%), Query Frame = 0 

Query: 1   MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           MNSV +R    FRIPSS  P SSFVAS QTSSK W STG SESD D+EKN+  +++YD  
Sbjct: 1   MNSVALRFAKHFRIPSSTFPASSFVASRQTSSKLWFSTGVSESDNDVEKNNREEEEYDDM 60

Query: 61  SN---ELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQ 120
            +   ELQPQGVDP RGWG+RGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGM+DQ
Sbjct: 61  FDDKVELQPQGVDPRRGWGFRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMFDQ 120

Query: 121 RIVDGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNI 180
           RIV+ + LPKPAQWHRIAVHNE LGAYAVQ+L K+ASVYVEGDIETRVYNDSINGEVKN+
Sbjct: 121 RIVEAKDLPKPAQWHRIAVHNEPLGAYAVQQLVKDASVYVEGDIETRVYNDSINGEVKNV 180

Query: 181 PEICVRRDGMLHLLKPGESASNLSLDDLKERLF 211
           PEICVRRDG + LLKP ESASN+SLDDLKE LF
Sbjct: 181 PEICVRRDGKIRLLKPAESASNISLDDLKEGLF 213

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BLAST of MELO3C015270.2 vs. NCBI nr
Match: XP_023516115.1 (single-stranded DNA-binding protein, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.8 bits (852), Expect = 8.6e-88
Identity = 167/217 (76.96%), Postives = 185/217 (85.25%), Query Frame = 0 

Query: 1   MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           MN+V +R L  FRI      +SSFVAS QTSSK WLST AS S +D+EKN+G +++YD F
Sbjct: 1   MNAVAMRFLKDFRI------SSSFVASRQTSSKLWLSTSASGSGIDVEKNNGDEEEYDDF 60

Query: 61  SN---ELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQ 120
            N   ELQPQGVDP RGWG+RGVHKAIICGR+GQAPVQKILRNGRTITIFTVGTGGM+DQ
Sbjct: 61  FNDKIELQPQGVDPRRGWGFRGVHKAIICGRIGQAPVQKILRNGRTITIFTVGTGGMFDQ 120

Query: 121 RIVDGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNI 180
           RIV+ + LPKPAQWHRIAVHNE LGAYAVQ+L KNASVYVEGDIETRVYNDSINGEVKN+
Sbjct: 121 RIVEAKDLPKPAQWHRIAVHNEPLGAYAVQQLVKNASVYVEGDIETRVYNDSINGEVKNV 180

Query: 181 PEICVRRDGMLHLLKPGESASNLSLDDLKERLFSNET 215
           PEICVRRDG + LLK GESASN+ LDDLKE LF NET
Sbjct: 181 PEICVRRDGKIRLLKAGESASNICLDDLKEGLFQNET 211

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BLAST of MELO3C015270.2 vs. TAIR10
Match: AT4G11060.1 (mitochondrially targeted single-stranded DNA binding protein)

HSP 1 Score: 255.8 bits (652), Expect = 2.4e-68
Identity = 128/209 (61.24%), Postives = 156/209 (74.64%), Query Frame = 0 

Query: 1   MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           MNS+ +R+    R    +S  S    S +  SK W STG  +  V+ +  +   +     
Sbjct: 1   MNSLAIRVSKVLR----SSSISPLAISAERGSKSWFSTGPIDEGVEEDFEENVTE----- 60

Query: 61  SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV 120
             ELQP GVDP +GWG+RGVH+AIICG+VGQAP+QKILRNGRT+TIFTVGTGGM+DQR+V
Sbjct: 61  RPELQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLV 120

Query: 121 DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI 180
                PKPAQWHRIAVHNE+LG+YAVQKL KN+SVYVEGDIETRVYNDSI+ EVK+IPEI
Sbjct: 121 GATNQPKPAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEI 180

Query: 181 CVRRDGMLHLLKPGESASNLSLDDLKERL 210
           CVRRDG + ++K GES S +S D+LKE L
Sbjct: 181 CVRRDGKIRMIKYGESISKISFDELKEGL 200

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BLAST of MELO3C015270.2 vs. TAIR10
Match: AT3G18580.1 (Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 101.3 bits (251), Expect = 7.7e-22
Identity = 54/159 (33.96%), Postives = 90/159 (56.60%), Query Frame = 0 

Query: 54  DDDYDAFSNELQPQGVDP-SRGWGYR--------------GVHKAIICGRVGQAPVQKIL 113
           D D+D   + ++P+  DP SR  G                G+ KAI+ G+VGQ P+QK L
Sbjct: 39  DSDFDELESPIEPKASDPVSRFSGEERVMEERPLENGLDSGIFKAILVGQVGQLPLQKKL 98

Query: 114 RNGRTITIFTVGTGGMYDQRIVDGRGLPK------PAQWHRIAVHNELLGAYAVQKLCKN 173
           ++GRT+T+F+VGTGG+ + R       P+        QWHR++V+ E L    ++ +   
Sbjct: 99  KSGRTVTLFSVGTGGIRNNRRPLINEDPREYASRSAVQWHRVSVYPERLADLVLKNVEPG 158

Query: 174 ASVYVEGDIETRVYNDSINGEVKNIPEICVRRDGMLHLL 192
             +Y+EG++ET+++ D + G V+ I E+ +RR+G +  L
Sbjct: 159 TVIYLEGNLETKIFTDPVTGLVRRIREVAIRRNGRVVFL 197

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BLAST of MELO3C015270.2 vs. Swiss-Prot
Match: sp|Q84J78|SSBP_ARATH (Single-stranded DNA-binding protein, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g11060 PE=2 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 4.4e-67
Identity = 128/209 (61.24%), Postives = 156/209 (74.64%), Query Frame = 0 

Query: 1   MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           MNS+ +R+    R    +S  S    S +  SK W STG  +  V+ +  +   +     
Sbjct: 1   MNSLAIRVSKVLR----SSSISPLAISAERGSKSWFSTGPIDEGVEEDFEENVTE----- 60

Query: 61  SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV 120
             ELQP GVDP +GWG+RGVH+AIICG+VGQAP+QKILRNGRT+TIFTVGTGGM+DQR+V
Sbjct: 61  RPELQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLV 120

Query: 121 DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI 180
                PKPAQWHRIAVHNE+LG+YAVQKL KN+SVYVEGDIETRVYNDSI+ EVK+IPEI
Sbjct: 121 GATNQPKPAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEI 180

Query: 181 CVRRDGMLHLLKPGESASNLSLDDLKERL 210
           CVRRDG + ++K GES S +S D+LKE L
Sbjct: 181 CVRRDGKIRMIKYGESISKISFDELKEGL 200

[Close]
BLAST of MELO3C015270.2 vs. Swiss-Prot
Match: sp|Q89A53|SSB_BUCBP (Single-stranded DNA-binding protein OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) OX=224915 GN=ssb PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.4e-11
Identity = 43/143 (30.07%), Postives = 75/143 (52.45%), Query Frame = 0 

Query: 78  RGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIVDGRGLPKPAQWHRIAVH 137
           RG++K I+ G +GQ P  + ++NG  +T  T+ T   +  +  +   + +  +WHRI   
Sbjct: 4   RGINKVILIGYLGQDPDVRYMQNGSAVTNITLATSETWKDK--NNGEIKEKTEWHRIVFF 63

Query: 138 NELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEICVRRDGMLHLLKPGESA 197
           N+ L   A + L K + VY+EG ++TR + D  NG  + I EI V   G + +L    S+
Sbjct: 64  NK-LAEIAGEYLKKGSQVYIEGSLQTRKWKDQ-NGIERYITEIIVSVGGTMQMLGSRNSS 123

Query: 198 S-------NLSLDDLKERLFSNE 214
           S       + + D+L ++L S +
Sbjct: 124 SLTASSGLSKNNDNLSKQLLSEK 142

[Close]
BLAST of MELO3C015270.2 vs. Swiss-Prot
Match: sp|Q93GP7|SSB2_SALTY (Single-stranded DNA-binding protein 2 OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=ssb2 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.4e-10
Identity = 36/114 (31.58%), Postives = 59/114 (51.75%), Query Frame = 0 

Query: 78  RGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIVDGRGLPKPAQWHRIAVH 137
           RGV+K I+ G +GQ P  + + NG  +   T+ T   +  R+     + +  +WHR+ V 
Sbjct: 4   RGVNKVILVGHIGQDPEVRYMPNGGAVANLTLATSETW--RVRQDGEMREHTEWHRVVVF 63

Query: 138 NELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEICVRRDGMLHLL 192
            + L   A + L K A VY+EG + TR + D  +G+ K   E+ V   G + +L
Sbjct: 64  GK-LAEIASEYLRKGAQVYIEGQLRTRKWTDQ-SGQDKYTTEVIVNVGGTMQML 113

[Close]
BLAST of MELO3C015270.2 vs. Swiss-Prot
Match: sp|Q8D254|SSB_WIGBR (Single-stranded DNA-binding protein OS=Wigglesworthia glossinidia brevipalpis OX=36870 GN=ssb PE=3 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 1.4e-09
Identity = 36/115 (31.30%), Postives = 65/115 (56.52%), Query Frame = 0 

Query: 78  RGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMY-DQRIVDGRGLPKPAQWHRIAV 137
           RG++K I+ G +GQ P  + + NG  IT  ++ T   + D+   + +   +  +WHR+ +
Sbjct: 4   RGINKVILIGNLGQDPEVRYIPNGNAITNLSLATSENWRDKNTGESK---EKTEWHRVIL 63

Query: 138 HNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEICVRRDGMLHLL 192
             + L   A + L K + VY+EG+++TR + D  NG+ + I EI V  +G + +L
Sbjct: 64  FGK-LAEVAGEYLKKGSQVYIEGNLQTRKWQDQ-NGQDRYITEIVVGINGCMQML 113

[Close]
BLAST of MELO3C015270.2 vs. Swiss-Prot
Match: sp|P18022|SSBP_ECOLX (Plasmid-derived single-stranded DNA-binding protein OS=Escherichia coli OX=562 GN=ssb PE=3 SV=3)

HSP 1 Score: 63.9 bits (154), Expect = 2.4e-09
Identity = 37/115 (32.17%), Postives = 62/115 (53.91%), Query Frame = 0 

Query: 78  RGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMY-DQRIVDGRGLPKPAQWHRIAV 137
           RG++K I+ GR+G  P  + + NG  +    V T   + D++  + R   +  +WHR+ +
Sbjct: 4   RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMR---EQTEWHRVVL 63

Query: 138 HNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEICVRRDGMLHLL 192
             + L   A + L K A VY+EG + TR ++D  NG  + I EI V+  G + +L
Sbjct: 64  FGK-LAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGTMQML 112

[Close]
BLAST of MELO3C015270.2 vs. TrEMBL
Match: tr|A0A1S3BQI7|A0A1S3BQI7_CUCME (single-stranded DNA-binding protein, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103492127 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 3.1e-118
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0 

Query: 1   MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF
Sbjct: 1   MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60

Query: 61  SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV 120
           SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV
Sbjct: 61  SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV 120

Query: 121 DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI 180
           DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI
Sbjct: 121 DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI 180

Query: 181 CVRRDGMLHLLKPGESASNLSLDDLKERLFSNET 215
           CVRRDGMLHLLKPGESASNLSLDDLKERLFSNET
Sbjct: 181 CVRRDGMLHLLKPGESASNLSLDDLKERLFSNET 214

[Close]
BLAST of MELO3C015270.2 vs. TrEMBL
Match: tr|A0A0A0LVY2|A0A0A0LVY2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G568540 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.6e-106
Identity = 193/214 (90.19%), Postives = 200/214 (93.46%), Query Frame = 0 

Query: 1   MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           MNSV +R LNRFR PSSN PTSSFVAS QTSSKFWLSTGASE D D+EKNDG +DDYD F
Sbjct: 1   MNSVAMRFLNRFRTPSSNFPTSSFVASAQTSSKFWLSTGASEGDNDVEKNDGEEDDYDTF 60

Query: 61  SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIV 120
           SNELQPQGVDP+RGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRI 
Sbjct: 61  SNELQPQGVDPTRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIF 120

Query: 121 DGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNIPEI 180
           DGR LPKPAQWHRIAVHNELLGAYAVQKLC+NASVYVEGDIETRVYNDSINGEVKNIPEI
Sbjct: 121 DGRDLPKPAQWHRIAVHNELLGAYAVQKLCRNASVYVEGDIETRVYNDSINGEVKNIPEI 180

Query: 181 CVRRDGMLHLLKPGESASNLSLDDLKERLFSNET 215
           CVRRDG L LLKPGESASN+SLDDLKE LFSN+T
Sbjct: 181 CVRRDGTLRLLKPGESASNISLDDLKEGLFSNKT 214

[Close]
BLAST of MELO3C015270.2 vs. TrEMBL
Match: tr|A0A1Q3C262|A0A1Q3C262_CEPFO (SSB domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_17721 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.3e-76
Identity = 144/213 (67.61%), Postives = 173/213 (81.22%), Query Frame = 0 

Query: 1   MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDA- 60
           M+++  R  N  R+P+    +S+ V   QTSSK W ST +S+SD D  KND  + ++DA 
Sbjct: 1   MSTLAARFANLLRVPAPTKHSSALVVGVQTSSKMWFSTKSSDSDNDDGKNDEVEQEFDAD 60

Query: 61  -FSN--ELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYD 120
            F +  ELQPQGVDP RGWG+RGVHKAIICG+VGQAPVQKILRNGRT+TIFTVGTGGM+D
Sbjct: 61  FFGDKPELQPQGVDPRRGWGFRGVHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMFD 120

Query: 121 QRIVDGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKN 180
           QRIV  + LPKPAQWHRIAVHNE LGAYAVQ+L KN+SVYVEGDIETRVYNDSINGEVKN
Sbjct: 121 QRIVGAKDLPKPAQWHRIAVHNEPLGAYAVQQLTKNSSVYVEGDIETRVYNDSINGEVKN 180

Query: 181 IPEICVRRDGMLHLLKPGESASNLSLDDLKERL 210
           +PEIC+RRDG + L+K GE+ +++S DDL+E L
Sbjct: 181 VPEICIRRDGKIRLIKSGEAVNSISFDDLREGL 213

[Close]
BLAST of MELO3C015270.2 vs. TrEMBL
Match: tr|A0A2P4LXA0|A0A2P4LXA0_QUESU (Single-stranded dna-binding protein, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_15741 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 3.2e-75
Identity = 147/212 (69.34%), Postives = 169/212 (79.72%), Query Frame = 0 

Query: 1   MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           M+S+  R     R  +S +PTSS V S Q SSK W ST + + D D  K DG ++D+D  
Sbjct: 1   MSSLAGRFSKLLRPFNSTTPTSSLVVSMQESSKSWYSTMSFDGDNDGGKKDGLEEDFDDL 60

Query: 61  ---SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQ 120
                ELQPQGVDP RGWG+RGVHKAIICG+VGQAPVQKILRNGR +TIFTVGTGGM+DQ
Sbjct: 61  LGDKTELQPQGVDPRRGWGFRGVHKAIICGKVGQAPVQKILRNGRMVTIFTVGTGGMFDQ 120

Query: 121 RIVDGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKNI 180
           RIV  + LPKPAQWHRIAVHNE LGAYAVQ+L KN+SVYVEGDIETRVYNDSINGEVKNI
Sbjct: 121 RIVGTKDLPKPAQWHRIAVHNEPLGAYAVQQLVKNSSVYVEGDIETRVYNDSINGEVKNI 180

Query: 181 PEICVRRDGMLHLLKPGESASNLSLDDLKERL 210
           PEIC+RRDG + L+K GES S++SLDDL+E L
Sbjct: 181 PEICIRRDGKIRLIKTGESLSSISLDDLREGL 212

[Close]
BLAST of MELO3C015270.2 vs. TrEMBL
Match: tr|A0A2I4G6W1|A0A2I4G6W1_9ROSI (single-stranded DNA-binding protein, mitochondrial OS=Juglans regia OX=51240 GN=LOC109005262 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 9.4e-75
Identity = 145/213 (68.08%), Postives = 170/213 (79.81%), Query Frame = 0 

Query: 1   MNSVTVRLLNRFRIPSSNSPTSSFVASTQTSSKFWLSTGASESDVDIEKNDGGDDDYDAF 60
           M+S+ +R     R+ +S + TSS V   Q SSK W ST +  S+    KND  ++D+D F
Sbjct: 1   MSSLALRFAKILRLSNSTTLTSSLVVCVQRSSKPWYSTMSFNSNNGDGKNDDVEEDFDTF 60

Query: 61  ----SNELQPQGVDPSRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYD 120
               + ELQPQGVDP RGWG+RGVHKAIICG+VGQAPVQKILRNGR +TIFTVGTGGM+D
Sbjct: 61  LGDKAVELQPQGVDPRRGWGFRGVHKAIICGKVGQAPVQKILRNGRMVTIFTVGTGGMFD 120

Query: 121 QRIVDGRGLPKPAQWHRIAVHNELLGAYAVQKLCKNASVYVEGDIETRVYNDSINGEVKN 180
           QR +  + LPKPAQWHRIAVHNELLGAYAVQ+L KN+SVYVEGDIETRVYNDSINGEVKN
Sbjct: 121 QRNLGAKDLPKPAQWHRIAVHNELLGAYAVQQLIKNSSVYVEGDIETRVYNDSINGEVKN 180

Query: 181 IPEICVRRDGMLHLLKPGESASNLSLDDLKERL 210
           IPEICVRRDG +HL+K GES S++S DDL+E L
Sbjct: 181 IPEICVRRDGKIHLIKTGESISSISFDDLREGL 213

The following BLAST results are available for this feature:
BLAST of MELO3C015270.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008450570.14.7e-118100.00PREDICTED: single-stranded DNA-binding protein, mitochondrial [Cucumis melo][more]
XP_004135584.12.4e-10690.19PREDICTED: single-stranded DNA-binding protein, mitochondrial [Cucumis sativus] ... [more]
XP_022968788.13.5e-8977.88single-stranded DNA-binding protein, mitochondrial [Cucurbita maxima] >XP_022968... [more]
XP_022135640.11.0e-8878.40single-stranded DNA-binding protein, mitochondrial [Momordica charantia][more]
XP_023516115.18.6e-8876.96single-stranded DNA-binding protein, mitochondrial [Cucurbita pepo subsp. pepo][more]
BLAST of MELO3C015270.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G11060.12.4e-6861.24mitochondrially targeted single-stranded DNA binding protein[more]
AT3G18580.17.7e-2233.96Nucleic acid-binding, OB-fold-like protein[more]
BLAST of MELO3C015270.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q84J78|SSBP_ARATH4.4e-6761.24Single-stranded DNA-binding protein, mitochondrial OS=Arabidopsis thaliana OX=37... [more]
sp|Q89A53|SSB_BUCBP4.4e-1130.07Single-stranded DNA-binding protein OS=Buchnera aphidicola subsp. Baizongia pist... [more]
sp|Q93GP7|SSB2_SALTY8.4e-1031.58Single-stranded DNA-binding protein 2 OS=Salmonella typhimurium (strain LT2 / SG... [more]
sp|Q8D254|SSB_WIGBR1.4e-0931.30Single-stranded DNA-binding protein OS=Wigglesworthia glossinidia brevipalpis OX... [more]
sp|P18022|SSBP_ECOLX2.4e-0932.17Plasmid-derived single-stranded DNA-binding protein OS=Escherichia coli OX=562 G... [more]
BLAST of MELO3C015270.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BQI7|A0A1S3BQI7_CUCME3.1e-118100.00single-stranded DNA-binding protein, mitochondrial OS=Cucumis melo OX=3656 GN=LO... [more]
tr|A0A0A0LVY2|A0A0A0LVY2_CUCSA1.6e-10690.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G568540 PE=4 SV=1[more]
tr|A0A1Q3C262|A0A1Q3C262_CEPFO1.3e-7667.61SSB domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_1772... [more]
tr|A0A2P4LXA0|A0A2P4LXA0_QUESU3.2e-7569.34Single-stranded dna-binding protein, mitochondrial OS=Quercus suber OX=58331 GN=... [more]
tr|A0A2I4G6W1|A0A2I4G6W1_9ROSI9.4e-7568.08single-stranded DNA-binding protein, mitochondrial OS=Juglans regia OX=51240 GN=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003697single-stranded DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR000424Primosome_PriB/ssb
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006260 DNA replication
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0044237 cellular metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003697 single-stranded DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C015270.2.1MELO3C015270.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:2.40.50.140coord: 77..196
e-value: 4.5E-24
score: 86.4
NoneNo IPR availablePANTHERPTHR10302:SF6SINGLE-STRANDED DNA-BINDING PROTEIN, MITOCHONDRIALcoord: 1..208
IPR000424Primosome PriB/single-strand DNA-bindingPFAMPF00436SSBcoord: 80..184
e-value: 1.1E-21
score: 76.7
IPR000424Primosome PriB/single-strand DNA-bindingPANTHERPTHR10302SINGLE-STRANDED DNA-BINDING PROTEINcoord: 1..208
IPR000424Primosome PriB/single-strand DNA-bindingPROSITEPS50935SSBcoord: 80..189
score: 11.806
IPR000424Primosome PriB/single-strand DNA-bindingCDDcd04496SSB_OBFcoord: 84..188
e-value: 1.94668E-17
score: 73.4153
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILYSSF50249Nucleic acid-binding proteinscoord: 78..195

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C015270.2Csa1G568540Cucumber (Chinese Long) v2cumedB033
MELO3C015270.2CSPI01G26030Wild cucumber (PI 183967)cpimedB036
MELO3C015270.2Cucsa.051260Cucumber (Gy14) v1cgymedB029
MELO3C015270.2CmaCh10G011460Cucurbita maxima (Rimu)cmamedB071
MELO3C015270.2CmoCh10G012300Cucurbita moschata (Rifu)cmomedB063
MELO3C015270.2Lsi06G000700Bottle gourd (USVL1VR-Ls)lsimedB418
MELO3C015270.2Cp4.1LG18g00290Cucurbita pepo (Zucchini)cpemedB389
MELO3C015270.2CsGy1G025310Cucumber (Gy14) v2cgybmedB032
MELO3C015270.2Cla005174Watermelon (97103) v1medwmB263
MELO3C015270.2ClCG03G017590Watermelon (Charleston Gray)medwcgB237
MELO3C015270.2Cla97C03G067970Watermelon (97103) v2medwmbB236
MELO3C015270.2Bhi02G001799Wax gourdmedwgoB307
MELO3C015270.2Carg27007Silver-seed gourdcarmedB0600
MELO3C015270.2CsaV3_1G038450Cucumber (Chinese Long) v3cucmedB039
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C015270.2Watermelon (97103) v2medwmbB228
MELO3C015270.2Wax gourdmedwgoB274
MELO3C015270.2Cucumber (Gy14) v2cgybmedB095
MELO3C015270.2Cucumber (Gy14) v1cgymedB100
MELO3C015270.2Cucumber (Gy14) v1cgymedB427
MELO3C015270.2Cucurbita maxima (Rimu)cmamedB116
MELO3C015270.2Cucurbita maxima (Rimu)cmamedB132
MELO3C015270.2Cucurbita maxima (Rimu)cmamedB166
MELO3C015270.2Cucurbita maxima (Rimu)cmamedB815
MELO3C015270.2Cucurbita moschata (Rifu)cmomedB111
MELO3C015270.2Cucurbita moschata (Rifu)cmomedB122
MELO3C015270.2Cucurbita moschata (Rifu)cmomedB157
MELO3C015270.2Cucurbita moschata (Rifu)cmomedB808
MELO3C015270.2Cucurbita pepo (Zucchini)cpemedB108
MELO3C015270.2Cucurbita pepo (Zucchini)cpemedB730
MELO3C015270.2Cucurbita pepo (Zucchini)cpemedB745
MELO3C015270.2Cucurbita pepo (Zucchini)cpemedB885
MELO3C015270.2Wild cucumber (PI 183967)cpimedB109
MELO3C015270.2Cucumber (Chinese Long) v2cumedB107
MELO3C015270.2Melon (DHL92) v3.6.1medmedB108
MELO3C015270.2Bottle gourd (USVL1VR-Ls)lsimedB112
MELO3C015270.2Watermelon (Charleston Gray)medwcgB228
MELO3C015270.2Watermelon (Charleston Gray)medwcgB231
MELO3C015270.2Watermelon (97103) v1medwmB255
MELO3C015270.2Watermelon (97103) v1medwmB275
MELO3C015270.2Silver-seed gourdcarmedB0574
MELO3C015270.2Cucumber (Chinese Long) v3cucmedB113