MELO3C014544 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C014544
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_141
Location	chr5 : 1488386 .. 1491328 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGCTTCCCAACTTGTGCTTACTCCCTCTACCAGCAGCCGCACTTCCTATCAGCAGTGGCAGCACTGTTTTCAGTTTCCTTCTATCTTATCCTCCTCCGTATTGCCTGCCGATCGCCGTCAACGCCCTCACCCGCACTTTCCTTTCTCCTCTTCTTGTCTCACTCTCTGCTGCAACCTCTGGCTGCCACGCCAACCAGTTCTTCTGCTGCAGTCCTCCGTCAATCGGTAGGTTGCTTTCGGCATCTGCTTGGATCATTGGAATAATTCTTTGATTCAACCAACTTTGATTTTAAGTAGGTTACATTGTTATCAGGCCAATTTTGATTGAAATTCCAGCCAAAACCGACCTATTTTGAATGGAAAACTTTTGATTTTTTTTTTCTCCGGCATTTGTCTTAAATTTTATCTTGTGTTTTTTTTTTTTTCTGATTATTTTCCCTTCTCAATGTTCTTTGCTTTGCAGTAACAAGATGCATTCCAGGGATAAAAGGGCAAAAGCGGGATCATCTAGGGACTCGACAGATATGGAAACTCAAATGAAAATGAGAAATATCAAGAAAGAAATTGAATTCCTCAGTAATTTCTCTTTTTCCCTCAGAATTCAGCTTATTATCTGTGCATATATGATACACATAGAATTTTACATGCGAAAAATGTACTACAAAACTTGATGCTTTATTGTATTAACAACCCACATTGCCTTTTTCTATTTCGTGTCTCTGATGCAAAACACAAACTACTTTATTTCAATTGATGCAACGGAGTAATTTTTCTTTTAGTTGAAAAATCTTAGCATCTATTATAATTGCCGTGAATCCTCTGAGCCCGTGAAAAATGAAGGTCTATACTAATTATTGTAGTGCAAGAGGATTATAGTGAAGAGCTTTGGTAGTTTGATTTTAGTTAGCAATCATACATGAGATTTAACGTCAAGCACCAAAGAAATTGAATAGAGGTTGGAACCACCGGCAGATTTACTCTAGGCCCAATGGGGTTCAAGCCCCTCAATTGTATGCTCTTTATGTGATATATATATATATATATATATATTTATATATCTGACGTAATACCAATACTATTAGCTAGCCTAGTGGTAAATATAGCTTCTAGCCTCCTTTAGACCCAAGTTGAAGCCTGATTTCTTAGATTTTTTCAGATTATTTGTATTGTATTATGAAGCCCCGTCAACAAATTTTTTGGATCCGACATTGGTTGGAACTGTATTTAACTTGCATACTCACATTTCCTTTCAGATTCTGTTTGTGTACAAACTTCTTTTAGAACATCTGCATGATCACACCTTCCCATAAGGTAGTTTCCTTTGCTTTCTTAGATCCCCCGTCAGGTCTTGTGTCAATTGTTATTGACCAAAATATTTAGACCCGTTGGAGACAAGATTTTTATAACTATTTTCTTTTAGTTTTCAAAACTTGACTTATTTTTTATTACATCGGCACAAAATGAATAAGAAAACAAAGAAACTTTAAGGTGGTGTGTGTTTGTATGCTTATTTTTCAAAAAGTCAAAGTAAACAATGAAATGGTTGTCAAATGAGGTGTTAGTAATTGGTTTGATTAACGTTAGTTGGTTATCCCTCACCATTTGTTTGGAGAAAATGTCTAGTTCTATGGTATTATTATGATCCTTCCATTTGGCATCTGACATGTCATTACATGATGTATGATTAATTCATAGGCCCCACACCATCCATTTTTAAATGCTTCCTTTATAGAAAGCAACGAATATTGATTTTATGAAAAAAAGTTGATACTACTACCATAGATTATAGTACTAGAAAATCTCTCTTGTGTGTGGTGGTTTTTGGGTGGAGGGTTGAATAGAAGGTAATGAAGAAAAAAGGTGAAAGTATTAAGCAGCTTATTTGTTTTTGTATTCTTTATTTCAGCCTCCTCTCATATGTCATGGAAAGACAAAAAGGAGATTGAGAGTAGAAAAATTGTTTCTCTGGGTGGAAAGGTACGAACTCAACTATCGATATGTCATATGCATTCTGTAGGCTCAATTTATTATGGCATCCTGAATGAAGGTAATTTTGAAGTCTCTACTATTGCTTTTAGACCATCAATCTTGTTTTACCATCTTGCAGCCTCAAAAGAAGCAAAGACTGCCTTTAAGTGTAGCACGACCAATCATGAAAAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGGTAAGGAAATCCATTAGATGGGTGACTTCCATGATTAAATGTTTGACAAATATCAGTTTATACCCTAAAATTTTTCGTTATCGGTCATTGTCACACCATTTGGTAACTAAATTTTTGTCCAAAATTTTAAAAATTTCTAATTCCAAGAATACTTTAAACGTTTATATTGCAACTTTCGAAAATATAAGCTACAAATGGCAAAGTTTAAAGGCATCAATCAACCATGTTTTTTAATTCTTCTCTTTCTTTTCAACCTACATCTTCTTCTGTTATTTGCAGCATTCTAGTGTTAGACAATTTGGTGGGATGGCTAGTAGTAGCAACTCGAGAAAATCTTCGGGGAAGCGTAGGCCAGAGGAGCAGGTTCTTAAGTCGAGTGAAGGTTTTTTTAAACATGGTGTGCTTGATGTGAAGCATTTACTACGCCCATCTTCTTCTAGAAATAATGGCCCTTCTAGGAATAGTGATCCTTTTAGGAATACTGACTTTGGAAATGAAATGGGCGGTAAAGGTAGAAGAAAAGGAGGAAAAAAGAAGAATAACAAAAGTAAGAAAAAGGGTGGCGGTAAGAAACGCCATTGAAATCATTCCATACTTTGAACATTATAGTTTTACAATTAGAATATGGATATCTTTTCTTCTCATATTTGTTGTAATTTAACGAAATTTTGCATTTTCTTGTTTCTCATATTGCTTCCATGAGTGCATCTATGGACGAGCATTTATTAAAATATTTATAAAATATAGC

mRNA sequence

GTGCTTCCCAACTTGTGCTTACTCCCTCTACCAGCAGCCGCACTTCCTATCAGCAGTGGCAGCACTGTTTTCAGTTTCCTTCTATCTTATCCTCCTCCGTATTGCCTGCCGATCGCCGTCAACGCCCTCACCCGCACTTTCCTTTCTCCTCTTCTTGTCTCACTCTCTGCTGCAACCTCTGGCTGCCACGCCAACCAGTTCTTCTGCTGCAGTCCTCCGTCAATCGTAACAAGATGCATTCCAGGGATAAAAGGGCAAAAGCGGGATCATCTAGGGACTCGACAGATATGGAAACTCAAATGAAAATGAGAAATATCAAGAAAGAAATTGAATTCCTCACCTCCTCTCATATGTCATGGAAAGACAAAAAGGAGATTGAGAGTAGAAAAATTGTTTCTCTGGGTGGAAAGCCTCAAAAGAAGCAAAGACTGCCTTTAAGTGTAGCACGACCAATCATGAAAAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGCATTCTAGTGTTAGACAATTTGGTGGGATGGCTAGTAGTAGCAACTCGAGAAAATCTTCGGGGAAGCGTAGGCCAGAGGAGCAGGTTCTTAAGTCGAGTGAAGGTTTTTTTAAACATGGTGTGCTTGATGTGAAGCATTTACTACGCCCATCTTCTTCTAGAAATAATGGCCCTTCTAGGAATAGTGATCCTTTTAGGAATACTGACTTTGGAAATGAAATGGGCGGTAAAGGTAGAAGAAAAGGAGGAAAAAAGAAGAATAACAAAAGTAAGAAAAAGGGTGGCGGTAAGAAACGCCATTGAAATCATTCCATACTTTGAACATTATAGTTTTACAATTAGAATATGGATATCTTTTCTTCTCATATTTGTTGTAATTTAACGAAATTTTGCATTTTCTTGTTTCTCATATTGCTTCCATGAGTGCATCTATGGACGAGCATTTATTAAAATATTTATAAAATATAGC

Coding sequence (CDS)

ATGCATTCCAGGGATAAAAGGGCAAAAGCGGGATCATCTAGGGACTCGACAGATATGGAAACTCAAATGAAAATGAGAAATATCAAGAAAGAAATTGAATTCCTCACCTCCTCTCATATGTCATGGAAAGACAAAAAGGAGATTGAGAGTAGAAAAATTGTTTCTCTGGGTGGAAAGCCTCAAAAGAAGCAAAGACTGCCTTTAAGTGTAGCACGACCAATCATGAAAAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGCATTCTAGTGTTAGACAATTTGGTGGGATGGCTAGTAGTAGCAACTCGAGAAAATCTTCGGGGAAGCGTAGGCCAGAGGAGCAGGTTCTTAAGTCGAGTGAAGGTTTTTTTAAACATGGTGTGCTTGATGTGAAGCATTTACTACGCCCATCTTCTTCTAGAAATAATGGCCCTTCTAGGAATAGTGATCCTTTTAGGAATACTGACTTTGGAAATGAAATGGGCGGTAAAGGTAGAAGAAAAGGAGGAAAAAAGAAGAATAACAAAAGTAAGAAAAAGGGTGGCGGTAAGAAACGCCATTGA

Protein sequence

MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKSSEGFFKHGVLDVKHLLRPSSSRNNGPSRNSDPFRNTDFGNEMGGKGRRKGGKKKNNKSKKKGGGKKRH*

Homology

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BLAST of MELO3C014544 vs. TrEMBL
Match: A0A0A0KEY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G429080 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 6.9e-100
Identity = 186/188 (98.94%), Postives = 186/188 (98.94%), Query Frame = 1


Query: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60
           MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP
Sbjct: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS 120
           QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS 120

Query: 121 SEGFFKHGVLDVKHLLRPSSSRNNGPSRNSDPFRNTDFGNEMGGKGRRKGGKKKNNKSKK 180
           SEGFFKHGVLDVKHLLRPSSSRNNG SRNSDPFRNTDFGNEMGG GRRKGGKKKNNKSKK
Sbjct: 121 SEGFFKHGVLDVKHLLRPSSSRNNGHSRNSDPFRNTDFGNEMGGLGRRKGGKKKNNKSKK 180

Query: 181 KGGGKKRH 189
           KGGGKKRH
Sbjct: 181 KGGGKKRH 188

[Close]

BLAST of MELO3C014544 vs. TrEMBL
Match: A0A0B2PZK2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_027159 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.0e-43
Identity = 101/188 (53.72%), Postives = 130/188 (69.15%), Query Frame = 1


Query: 1   MHSRDKRAKA-GSSRDSTDMETQ-MKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGG 60
           MH   K+A   G+ R+ TDM+ Q M +R I K++E  + SHMSWK++K+IE+R +VSLGG
Sbjct: 4   MHKNRKQAGGHGTPREETDMQEQEMDIRKIMKDVENFSYSHMSWKERKKIENRNVVSLGG 63

Query: 61  KPQKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVL 120
           KPQK QRLPLSVARP+MKKQKEREQKM+QE   + QFGG    S S++S+GK +PE + L
Sbjct: 64  KPQKNQRLPLSVARPMMKKQKEREQKMLQERLILGQFGGKLGGS-SKRSAGKHKPENRGL 123

Query: 121 KSSEGFFKHGVLDVKHLLRPSSSRNNGPSRNSDPFRNTDFGNEMGGKGRRKGGKKKNNKS 180
           KSSEG F++G+L+VKHLL            NS P R+ + G  M    + KGGKKKN+  
Sbjct: 124 KSSEGHFRNGILNVKHLL------------NSAPSRDRETGTNMSNAWKGKGGKKKNS-- 175

Query: 181 KKKGGGKK 187
             KGGGKK
Sbjct: 184 -NKGGGKK 175

[Close]

BLAST of MELO3C014544 vs. TrEMBL
Match: I1J561_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G027700 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.0e-43
Identity = 101/188 (53.72%), Postives = 130/188 (69.15%), Query Frame = 1


Query: 1   MHSRDKRAKA-GSSRDSTDMETQ-MKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGG 60
           MH   K+A   G+ R+ TDM+ Q M +R I K++E  + SHMSWK++K+IE+R +VSLGG
Sbjct: 4   MHKNRKQAGGHGTPREETDMQEQEMDIRKIMKDVENFSYSHMSWKERKKIENRNVVSLGG 63

Query: 61  KPQKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVL 120
           KPQK QRLPLSVARP+MKKQKEREQKM+QE   + QFGG    S S++S+GK +PE + L
Sbjct: 64  KPQKNQRLPLSVARPMMKKQKEREQKMLQERLILGQFGGKLGGS-SKRSAGKHKPENRGL 123

Query: 121 KSSEGFFKHGVLDVKHLLRPSSSRNNGPSRNSDPFRNTDFGNEMGGKGRRKGGKKKNNKS 180
           KSSEG F++G+L+VKHLL            NS P R+ + G  M    + KGGKKKN+  
Sbjct: 124 KSSEGHFRNGILNVKHLL------------NSAPSRDRETGTNMSNAWKGKGGKKKNS-- 175

Query: 181 KKKGGGKK 187
             KGGGKK
Sbjct: 184 -NKGGGKK 175

[Close]

BLAST of MELO3C014544 vs. TrEMBL
Match: V4S1Z0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006059mg PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.7e-42
Identity = 100/190 (52.63%), Postives = 130/190 (68.42%), Query Frame = 1


Query: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60
           MH   +R      RD    + +M  R I K+IEFL SSHMSWK++KE+E++++VSLGGK 
Sbjct: 1   MHKNKQR------RDMETKDEEMDFRKIMKDIEFLGSSHMSWKERKELENKRVVSLGGKA 60

Query: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS 120
            KKQRLPLSVAR  MK+QKEREQKM +E + + +FG  A  +  ++++ +R+PE++VLKS
Sbjct: 61  SKKQRLPLSVARVPMKRQKEREQKMQEERAILGRFG--AKFAGPKRATERRKPEDRVLKS 120

Query: 121 SEGFFKHGVLDVKHLLRPSSSRNNGPSRNSDPFRNTDFGNEMGGKGRRKGGK--KKNNKS 180
           SEG F++GVLDVKHLLRP      GPS      R+T+    MGGKG  KGGK  K+ N  
Sbjct: 121 SEGHFRNGVLDVKHLLRP------GPS------RDTESSKHMGGKGGNKGGKKGKQKNHG 170

Query: 181 KKKGGGKKRH 189
           K KGG KKRH
Sbjct: 181 KNKGGKKKRH 170

[Close]

BLAST of MELO3C014544 vs. TrEMBL
Match: A0A0V0HDB3_SOLCH (Putative axoneme-associated protein-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 6.6e-42
Identity = 95/170 (55.88%), Postives = 129/170 (75.88%), Query Frame = 1


Query: 20  ETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQK 79
           E +M  ++I KE EFL S+HM+WK+KKE+E+RK+V+LGGKPQKKQRLPLSVAR +MKKQK
Sbjct: 5   EQRMDFKSIMKEAEFLGSAHMTWKEKKELENRKVVALGGKPQKKQRLPLSVARVMMKKQK 64

Query: 80  EREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKSSEGFFKHGVLDVKHLLRPS 139
           ERE+KM +E+  + +FGG   +S+SRK++G+RRPE++VLKS+EG F++GVLDVK LL+PS
Sbjct: 65  EREEKMQEENLVLGRFGG---ASSSRKAAGRRRPEDRVLKSTEGNFRNGVLDVKQLLKPS 124

Query: 140 SSRNNGPSRNSDPFRNTDFGNEMGGKGRRKGGKKKNNKSKKKGG-GKKRH 189
           +     P  + D  + +    +  GK ++KGGKK   K  K GG GKKRH
Sbjct: 125 A-----PKASFDDGKKSFSSGK--GKKKKKGGKKNKGKKNKGGGRGKKRH 164

[Close]

BLAST of MELO3C014544 vs. TAIR10
Match: AT2G44820.2 (AT2G44820.2 unknown protein)

HSP 1 Score: 164.5 bits (415), Expect = 6.5e-41
Identity = 97/194 (50.00%), Postives = 126/194 (64.95%), Query Frame = 1


Query: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60
           ++ R    K      ST ++  +  +NI K++    SSHM+WKDKK +E +K+ +LGGK 
Sbjct: 2   VYKRKSMEKKKEGMGST-IDQNLSFKNIMKDVALFGSSHMTWKDKKALEDKKVTALGGKA 61

Query: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS 120
           QK  RLPLSVAR  MKKQK+RE+KM++++  + +FGG  SSS  + +  KR PEE+VLKS
Sbjct: 62  QKMHRLPLSVARVQMKKQKDREEKMLEQNVILGRFGGGGSSSR-KPAERKRTPEERVLKS 121

Query: 121 SEGFFKHGVLDVKHLLR--PSSS--RNNGPSRNSDPFRNTDFGNEMGG---KGRRKGGKK 180
           + G FK GVLDVKHLLR  PSSS  R+    + S   +N   G + GG   KG++KGGK 
Sbjct: 122 TGGIFKGGVLDVKHLLRSGPSSSSDRDFKTKKPSRVEKNLGGGGDGGGIKSKGKKKGGKN 181

Query: 181 KNNKSKKKGGGKKR 188
           K NK KKKGGGKKR
Sbjct: 182 K-NKGKKKGGGKKR 192

[Close]

BLAST of MELO3C014544 vs. NCBI nr
Match: gi|659097445|ref|XP_008449630.1| (PREDICTED: serine/arginine-rich splicing factor 4 [Cucumis melo])

HSP 1 Score: 377.5 bits (968), Expect = 1.4e-101
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1


Query: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60
           MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP
Sbjct: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS 120
           QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS 120

Query: 121 SEGFFKHGVLDVKHLLRPSSSRNNGPSRNSDPFRNTDFGNEMGGKGRRKGGKKKNNKSKK 180
           SEGFFKHGVLDVKHLLRPSSSRNNGPSRNSDPFRNTDFGNEMGGKGRRKGGKKKNNKSKK
Sbjct: 121 SEGFFKHGVLDVKHLLRPSSSRNNGPSRNSDPFRNTDFGNEMGGKGRRKGGKKKNNKSKK 180

Query: 181 KGGGKKRH 189
           KGGGKKRH
Sbjct: 181 KGGGKKRH 188

[Close]

BLAST of MELO3C014544 vs. NCBI nr
Match: gi|449444843|ref|XP_004140183.1| (PREDICTED: uncharacterized protein LOC101203308 [Cucumis sativus])

HSP 1 Score: 371.3 bits (952), Expect = 9.9e-100
Identity = 186/188 (98.94%), Postives = 186/188 (98.94%), Query Frame = 1


Query: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60
           MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP
Sbjct: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS 120
           QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS 120

Query: 121 SEGFFKHGVLDVKHLLRPSSSRNNGPSRNSDPFRNTDFGNEMGGKGRRKGGKKKNNKSKK 180
           SEGFFKHGVLDVKHLLRPSSSRNNG SRNSDPFRNTDFGNEMGG GRRKGGKKKNNKSKK
Sbjct: 121 SEGFFKHGVLDVKHLLRPSSSRNNGHSRNSDPFRNTDFGNEMGGLGRRKGGKKKNNKSKK 180

Query: 181 KGGGKKRH 189
           KGGGKKRH
Sbjct: 181 KGGGKKRH 188

[Close]

BLAST of MELO3C014544 vs. NCBI nr
Match: gi|470110655|ref|XP_004291589.1| (PREDICTED: uncharacterized protein LOC101305037 [Fragaria vesca subsp. vesca])

HSP 1 Score: 185.7 bits (470), Expect = 7.7e-44
Identity = 97/174 (55.75%), Postives = 128/174 (73.56%), Query Frame = 1


Query: 15  DSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPI 74
           DS D+ T M  R I K IE L SSHM+WK++KE+E++K+V+LGGKP KKQRLPLS+AR +
Sbjct: 33  DSNDLRTDM--REIYKRIELLGSSHMTWKERKELENKKVVALGGKPPKKQRLPLSIARVV 92

Query: 75  MKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKSSEGFFKHGVLDVKH 134
           MKKQK+REQK +QE+  + +FGG  S   S++S  KRRPE++VL++SEG+FK+GVLDVKH
Sbjct: 93  MKKQKDREQKQLQENVILGRFGG-KSRGGSKRSVEKRRPEDRVLRASEGYFKNGVLDVKH 152

Query: 135 LLRPSSSRNNGPSRNSDPFRNTDFGNEMGGKGRRKGGKKKNNKSKKKGGGKKRH 189
           LLRP+SSR+       D   + +F     G G++ GGKK   K+K K GGKKRH
Sbjct: 153 LLRPTSSRDR------DGGAHVNFTGPKKGGGKKGGGKKGGGKNKGKKGGKKRH 197

[Close]

BLAST of MELO3C014544 vs. NCBI nr
Match: gi|697099033|ref|XP_009629745.1| (PREDICTED: axoneme-associated protein mst101(2) [Nicotiana tomentosiformis])

HSP 1 Score: 184.1 bits (466), Expect = 2.2e-43
Identity = 96/169 (56.80%), Postives = 129/169 (76.33%), Query Frame = 1


Query: 20  ETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQK 79
           ET+M  ++I KE+E+L S+HM+WK+KKE+E++KIVSLGGKPQKKQRLPLSVAR +MKKQK
Sbjct: 5   ETKMDFKSILKEVEYLGSAHMTWKEKKELENKKIVSLGGKPQKKQRLPLSVARVMMKKQK 64

Query: 80  EREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKSSEGFFKHGVLDVKHLLRPS 139
           ERE+K+ +E+  + +FGG  S S+SRK++G+RRPE++VLKS+EG F++GVLDVK LL+PS
Sbjct: 65  EREEKIQEENLILGRFGG-NSGSSSRKAAGRRRPEDRVLKSTEGHFRNGVLDVKDLLKPS 124

Query: 140 SSRNNGPSRNSDPFRNTDFGNEMGGKGRRKGGKKKNNKSKKKGGGKKRH 189
           + +   P       +  D       KG++K G KKN   KKKG GKKRH
Sbjct: 125 APK--AP-------KAFDAKQSFASKGKKKKGGKKNKGKKKKGPGKKRH 163

[Close]

BLAST of MELO3C014544 vs. NCBI nr
Match: gi|356497496|ref|XP_003517596.1| (PREDICTED: uncharacterized protein LOC100819044 [Glycine max])

HSP 1 Score: 182.2 bits (461), Expect = 8.5e-43
Identity = 101/188 (53.72%), Postives = 130/188 (69.15%), Query Frame = 1


Query: 1   MHSRDKRAKA-GSSRDSTDMETQ-MKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGG 60
           MH   K+A   G+ R+ TDM+ Q M +R I K++E  + SHMSWK++K+IE+R +VSLGG
Sbjct: 4   MHKNRKQAGGHGTPREETDMQEQEMDIRKIMKDVENFSYSHMSWKERKKIENRNVVSLGG 63

Query: 61  KPQKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVL 120
           KPQK QRLPLSVARP+MKKQKEREQKM+QE   + QFGG    S S++S+GK +PE + L
Sbjct: 64  KPQKNQRLPLSVARPMMKKQKEREQKMLQERLILGQFGGKLGGS-SKRSAGKHKPENRGL 123

Query: 121 KSSEGFFKHGVLDVKHLLRPSSSRNNGPSRNSDPFRNTDFGNEMGGKGRRKGGKKKNNKS 180
           KSSEG F++G+L+VKHLL            NS P R+ + G  M    + KGGKKKN+  
Sbjct: 124 KSSEGHFRNGILNVKHLL------------NSAPSRDRETGTNMSNAWKGKGGKKKNS-- 175

Query: 181 KKKGGGKK 187
             KGGGKK
Sbjct: 184 -NKGGGKK 175

The following BLAST results are available for this feature:

BLAST of MELO3C014544 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEY3_CUCSA	6.9e-100	98.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G429080 PE=4 SV=1	[more]
A0A0B2PZK2_GLYSO	6.0e-43	53.72	Uncharacterized protein OS=Glycine soja GN=glysoja_027159 PE=4 SV=1	[more]
I1J561_SOYBN	6.0e-43	53.72	Uncharacterized protein OS=Glycine max GN=GLYMA_01G027700 PE=4 SV=1	[more]
V4S1Z0_9ROSI	1.7e-42	52.63	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006059mg PE=4 SV=1	[more]
A0A0V0HDB3_SOLCH	6.6e-42	55.88	Putative axoneme-associated protein-like OS=Solanum chacoense PE=4 SV=1	[more]

BLAST of MELO3C014544 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44820.2	6.5e-41	50.00	unknown protein	[more]

BLAST of MELO3C014544 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659097445\|ref\|XP_008449630.1\|	1.4e-101	100.00	PREDICTED: serine/arginine-rich splicing factor 4 [Cucumis melo]	[more]
gi\|449444843\|ref\|XP_004140183.1\|	9.9e-100	98.94	PREDICTED: uncharacterized protein LOC101203308 [Cucumis sativus]	[more]
gi\|470110655\|ref\|XP_004291589.1\|	7.7e-44	55.75	PREDICTED: uncharacterized protein LOC101305037 [Fragaria vesca subsp. vesca]	[more]
gi\|697099033\|ref\|XP_009629745.1\|	2.2e-43	56.80	PREDICTED: axoneme-associated protein mst101(2) [Nicotiana tomentosiformis]	[more]
gi\|356497496\|ref\|XP_003517596.1\|	8.5e-43	53.72	PREDICTED: uncharacterized protein LOC100819044 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027973	DUF4602

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU48193	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C014544T1	MELO3C014544T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU48193	MU48193	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027973	Protein of unknown function DUF4602	PFAM	PF15375	DUF4602	coord: 6..111 score: 1.2
None	No IPR available	PANTHER	PTHR28096	FAMILY NOT NAMED	coord: 3..177 score: 4.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C014544	Csa6G429080	Cucumber (Chinese Long) v2	cumeB491
MELO3C014544	Cla008592	Watermelon (97103) v1	mewmB419
MELO3C014544	ClCG02G022680	Watermelon (Charleston Gray)	mewcgB376
MELO3C014544	Cla97C02G048770	Watermelon (97103) v2	mewmbB377
MELO3C014544	Bhi10G000178	Wax gourd	mewgoB484
MELO3C014544	CSPI06G23670	Wild cucumber (PI 183967)	cpimeB493
MELO3C014544	Cucsa.086830	Cucumber (Gy14) v1	cgymeB098
MELO3C014544	Lsi10G011090	Bottle gourd (USVL1VR-Ls)	lsimeB072
MELO3C014544	Cp4.1LG16g08370	Cucurbita pepo (Zucchini)	cpemeB278
MELO3C014544	CsGy6G023010	Cucumber (Gy14) v2	cgybmeB432
MELO3C014544	Carg06865	Silver-seed gourd	carmeB0528
MELO3C014544	CsaV3_6G038800	Cucumber (Chinese Long) v3	cucmeB503

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C014544	Cucurbita moschata (Rifu)	cmomeB509
MELO3C014544	Cucurbita moschata (Rifu)	cmomeB561
MELO3C014544	Cucurbita pepo (Zucchini)	cpemeB696
MELO3C014544	Silver-seed gourd	carmeB0910
MELO3C014544	Cucurbita maxima (Rimu)	cmameB521
MELO3C014544	Cucurbita maxima (Rimu)	cmameB572