MU48193 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU48193
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Imidazole glycerol phosphate synthase subunit HisH
Location	chr5 : 1488493 .. 1491292 (-)
Sequence length	822

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CCGCACTTCCTATCAGCAGTGGCAGCACTGTTTTCAGTTTCCTTCTATCTTATCCTCCTCCGTATTGCCTGCCGATCGCCGTCAACGCCCTCACCCGCACTTTCCTTTCTCCTCTTCTTGTCTCACTCTCTGCTGCAACCTCTGGCTGCCACGCCAACCACTTCTTCTGCTGCAGTCCTCCGTCAATCGTAACAAGATGCATTCCAGGGATAAAAGGGCAAAAGCGGGATCATCTAGGGACTCGACAGATATGGAAACTCAAATGAAAATGAGAAATATCAAGAAAGAAATTGAATTCCTCACCTCCTCTCATATGTCATGGAAAGACAAAAAGGGGATTGAGAGTAGAAAAATTGTTTCTCTGGGTGGAAAGCCTCAAAAGAAGCAAAGACTGCCTTTAAGTGTAGCACGACCAATCATGAAAAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGCATTCTAGTGTTAGACAATTTGGTGGGATGGCTAGTAGTAGCAACTCGAGAAAATCTTCGGGGAAGCGTAGGCCAGAGGAGCAGGTTCTTAAGTCGAGTGAAGGCTTTTTTAAACATGGTGTGCTTGATGTGAAGCATTTACTACGCCCATCTTCTTCTAGAAATAATGGCCCTTCTAGGAATAGTGATCCTTTTAGGAATACTGACTTTGGAAATGAAATGGGCGGTAAAGGTAGAAGAAAAGGAGGAAAAAAGAAGAATAACAAAAGTAAGAAAAAGGGTGGCGGTAAGAAACGCCATTGAAATCATTCCATACTTTGAACATTATAGTTTTACAATGAGAATATGGATATCTTTTCTTC

Library


Library category	ESTs
melon HS library	1
melon PSI library	1

Homology

[Close]

BLAST of MU48193 vs. TrEMBL
Match: A0A0A0KEY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G429080 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 6.8e-64
Identity = 132/162 (81.48%), Postives = 132/162 (81.48%), Query Frame = 2


Query: 197 MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKGIESRKIVSLGGKP 256
           MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKK IESRKIVSLGGKP
Sbjct: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 257 QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMAXXXXXXXXXXXXXPEEQVLKS 316
           QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMA             PEEQVLKS
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS 120

Query: 317 SEGFFKHGVLDVKHLLXXXXXXXXXXXXXXXXFRNTDFGNEM 376
           SEGFFKHGVLDVKHLL                FRNTDFGNEM
Sbjct: 121 SEGFFKHGVLDVKHLLRPSSSRNNGHSRNSDPFRNTDFGNEM 162

Query: 377  436
           
Sbjct: 181  162

Query: 437  496
           
Sbjct: 241  162

Query: 497  556
           
Sbjct: 301  162

Query: 557  616
           
Sbjct: 361  162

Query: 617  676
           
Sbjct: 421  162

Query: 677  683
           
Sbjct: 481  162

[Close]

BLAST of MU48193 vs. TrEMBL
Match: I1J561_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G027700 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.4e-31
Identity = 78/139 (56.12%), Postives = 98/139 (70.50%), Query Frame = 2


Query: 194 KMHSRDKRAKA-GSSRDSTDMETQ-MKMRNIKKEIEFLTSSHMSWKDKKGIESRKIVSLG 253
           KMH   K+A   G+ R+ TDM+ Q M +R I K++E  + SHMSWK++K IE+R +VSLG
Sbjct: 3   KMHKNRKQAGGHGTPREETDMQEQEMDIRKIMKDVENFSYSHMSWKERKKIENRNVVSLG 62

Query: 254 GKPQKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMAXXXXXXXXXXXXXPEEQV 313
           GKPQK QRLPLSVARP+MKKQKEREQKM+QE   + QFGG               PE + 
Sbjct: 63  GKPQKNQRLPLSVARPMMKKQKEREQKMLQERLILGQFGG-KLGGSSKRSAGKHKPENRG 122

Query: 314 LKSSEGFFKHGVLDVKHLL 373
           LKSSEG F++G+L+VKHLL
Sbjct: 123 LKSSEGHFRNGILNVKHLL 140

Query: 374  433
           
Sbjct: 183  140

Query: 434  493
           
Sbjct: 243  140

Query: 494  553
           
Sbjct: 303  140

Query: 554  605
           
Sbjct: 363  140

[Close]

BLAST of MU48193 vs. TrEMBL
Match: A0A0B2PZK2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_027159 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.4e-31
Identity = 78/139 (56.12%), Postives = 98/139 (70.50%), Query Frame = 2


Query: 194 KMHSRDKRAKA-GSSRDSTDMETQ-MKMRNIKKEIEFLTSSHMSWKDKKGIESRKIVSLG 253
           KMH   K+A   G+ R+ TDM+ Q M +R I K++E  + SHMSWK++K IE+R +VSLG
Sbjct: 3   KMHKNRKQAGGHGTPREETDMQEQEMDIRKIMKDVENFSYSHMSWKERKKIENRNVVSLG 62

Query: 254 GKPQKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMAXXXXXXXXXXXXXPEEQV 313
           GKPQK QRLPLSVARP+MKKQKEREQKM+QE   + QFGG               PE + 
Sbjct: 63  GKPQKNQRLPLSVARPMMKKQKEREQKMLQERLILGQFGG-KLGGSSKRSAGKHKPENRG 122

Query: 314 LKSSEGFFKHGVLDVKHLL 373
           LKSSEG F++G+L+VKHLL
Sbjct: 123 LKSSEGHFRNGILNVKHLL 140

Query: 374  433
           
Sbjct: 183  140

Query: 434  493
           
Sbjct: 243  140

Query: 494  553
           
Sbjct: 303  140

Query: 554  605
           
Sbjct: 363  140

[Close]

BLAST of MU48193 vs. TrEMBL
Match: W9QRW5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013553 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.2e-28
Identity = 72/135 (53.33%), Postives = 93/135 (68.89%), Query Frame = 2


Query: 206 RDKRAKAGSSRDST--DMETQMKMRNIKKEIEFLTSSHMSWKDKKGIESRKIVSLGGKPQ 265
           +DK+   G S  +     + +M +  I K+IE L SSHM+WK+KK +E++K+VSLGGKPQ
Sbjct: 3   KDKQGDRGRSSRAPLKSKDERMDIMKIMKDIEVLGSSHMTWKEKKALENKKVVSLGGKPQ 62

Query: 266 KKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMAXXXXXXXXXXXXXPEEQVLKSS 325
           K+QRLPLSVA+  MKKQKEREQKM+QE   +  FGG               PE+QVLKSS
Sbjct: 63  KQQRLPLSVAKGRMKKQKEREQKMLQERMILGCFGGKYGGGGPKRSEVKRRPEDQVLKSS 122

Query: 326 EGFFKHGVLDVKHLL 385
           EG F++GVL+VKHLL
Sbjct: 123 EGHFRNGVLNVKHLL 137

Query: 386  445
           
Sbjct: 183  137

Query: 446  505
           
Sbjct: 243  137

Query: 506  565
           
Sbjct: 303  137

Query: 566  605
           
Sbjct: 363  137

[Close]

BLAST of MU48193 vs. TrEMBL
Match: A0A0B2RAR7_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_008398 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.7e-28
Identity = 75/139 (53.96%), Postives = 94/139 (67.63%), Query Frame = 2


Query: 194 KMHSRDKRAKA-GSSRDSTD-METQMKMRNIKKEIEFLTSSHMSWKDKKGIESRKIVSLG 253
           KM    K+A   G  R+ TD  E +M +R I K++E  + SHMSWK++K IE+R +VSLG
Sbjct: 3   KMCKNKKQAGGHGPPREQTDTQEQEMDIRKIMKDVENFSYSHMSWKERKKIENRNVVSLG 62

Query: 254 GKPQKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMAXXXXXXXXXXXXXPEEQV 313
           GKPQK QRLPLSVARP+MKKQKEREQKM+QE   + QFGG               P  + 
Sbjct: 63  GKPQKNQRLPLSVARPMMKKQKEREQKMLQERLILGQFGG-KLGGSSKRSAGKHKPGNRG 122

Query: 314 LKSSEGFFKHGVLDVKHLL 373
           LKSSEG F++G+L+VKHLL
Sbjct: 123 LKSSEGHFRNGILNVKHLL 140

Query: 374  433
           
Sbjct: 183  140

Query: 434  493
           
Sbjct: 243  140

Query: 494  553
           
Sbjct: 303  140

Query: 554  605
           
Sbjct: 363  140

[Close]

BLAST of MU48193 vs. TAIR10
Match: AT2G44820.2 (AT2G44820.2 unknown protein)

HSP 1 Score: 118.2 bits (295), Expect = 7.7e-27
Identity = 63/136 (46.32%), Postives = 84/136 (61.76%), Query Frame = 2


Query: 197 MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKGIESRKIVSLGGKP 256
           ++ R    K      ST ++  +  +NI K++    SSHM+WKDKK +E +K+ +LGGK 
Sbjct: 2   VYKRKSMEKKKEGMGST-IDQNLSFKNIMKDVALFGSSHMTWKDKKALEDKKVTALGGKA 61

Query: 257 QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMAXXXXXXXXXXXXXPEEQVLKS 316
           QK  RLPLSVAR  MKKQK+RE+KM++++  + +FGG               PEE+VLKS
Sbjct: 62  QKMHRLPLSVARVQMKKQKDREEKMLEQNVILGRFGG-GGSSSRKPAERKRTPEERVLKS 121

Query: 317 SEGFFKHGVLDVKHLL 376
           + G FK GVLDVKHLL
Sbjct: 122 TGGIFKGGVLDVKHLL 135

Query: 377  436
           
Sbjct: 182  135

Query: 437  496
           
Sbjct: 242  135

Query: 497  556
           
Sbjct: 302  135

Query: 557  605
           
Sbjct: 362  135

[Close]

BLAST of MU48193 vs. NCBI nr
Match: gi|449444843|ref|XP_004140183.1| (PREDICTED: uncharacterized protein LOC101203308 [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 5.9e-61
Identity = 132/162 (81.48%), Postives = 132/162 (81.48%), Query Frame = 2


Query: 197 MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKGIESRKIVSLGGKP 256
           MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKK IESRKIVSLGGKP
Sbjct: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 257 QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMAXXXXXXXXXXXXXPEEQVLKS 316
           QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMA             PEEQVLKS
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS 120

Query: 317 SEGFFKHGVLDVKHLLXXXXXXXXXXXXXXXXFRNTDFGNEM 376
           SEGFFKHGVLDVKHLL                FRNTDFGNEM
Sbjct: 121 SEGFFKHGVLDVKHLLRPSSSRNNGHSRNSDPFRNTDFGNEM 162

Query: 377  436
           
Sbjct: 181  162

Query: 437  496
           
Sbjct: 241  162

Query: 497  556
           
Sbjct: 301  162

Query: 557  616
           
Sbjct: 361  162

Query: 617  676
           
Sbjct: 421  162

Query: 677  683
           
Sbjct: 481  162

[Close]

BLAST of MU48193 vs. NCBI nr
Match: gi|659097445|ref|XP_008449630.1| (PREDICTED: serine/arginine-rich splicing factor 4 [Cucumis melo])

HSP 1 Score: 243.0 bits (619), Expect = 5.9e-61
Identity = 132/162 (81.48%), Postives = 132/162 (81.48%), Query Frame = 2


Query: 197 MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKGIESRKIVSLGGKP 256
           MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKK IESRKIVSLGGKP
Sbjct: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 257 QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMAXXXXXXXXXXXXXPEEQVLKS 316
           QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMA             PEEQVLKS
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS 120

Query: 317 SEGFFKHGVLDVKHLLXXXXXXXXXXXXXXXXFRNTDFGNEM 376
           SEGFFKHGVLDVKHLL                FRNTDFGNEM
Sbjct: 121 SEGFFKHGVLDVKHLLRPSSSRNNGPSRNSDPFRNTDFGNEM 162

Query: 377  436
           
Sbjct: 181  162

Query: 437  496
           
Sbjct: 241  162

Query: 497  556
           
Sbjct: 301  162

Query: 557  616
           
Sbjct: 361  162

Query: 617  676
           
Sbjct: 421  162

Query: 677  683
           
Sbjct: 481  162

[Close]

BLAST of MU48193 vs. NCBI nr
Match: gi|356497496|ref|XP_003517596.1| (PREDICTED: uncharacterized protein LOC100819044 [Glycine max])

HSP 1 Score: 133.7 bits (335), Expect = 5.0e-28
Identity = 78/139 (56.12%), Postives = 98/139 (70.50%), Query Frame = 2


Query: 194 KMHSRDKRAKA-GSSRDSTDMETQ-MKMRNIKKEIEFLTSSHMSWKDKKGIESRKIVSLG 253
           KMH   K+A   G+ R+ TDM+ Q M +R I K++E  + SHMSWK++K IE+R +VSLG
Sbjct: 3   KMHKNRKQAGGHGTPREETDMQEQEMDIRKIMKDVENFSYSHMSWKERKKIENRNVVSLG 62

Query: 254 GKPQKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMAXXXXXXXXXXXXXPEEQV 313
           GKPQK QRLPLSVARP+MKKQKEREQKM+QE   + QFGG               PE + 
Sbjct: 63  GKPQKNQRLPLSVARPMMKKQKEREQKMLQERLILGQFGG-KLGGSSKRSAGKHKPENRG 122

Query: 314 LKSSEGFFKHGVLDVKHLL 373
           LKSSEG F++G+L+VKHLL
Sbjct: 123 LKSSEGHFRNGILNVKHLL 140

Query: 374  433
           
Sbjct: 183  140

Query: 434  493
           
Sbjct: 243  140

Query: 494  553
           
Sbjct: 303  140

Query: 554  605
           
Sbjct: 363  140

[Close]

BLAST of MU48193 vs. NCBI nr
Match: gi|747040299|ref|XP_011074585.1| (PREDICTED: uncharacterized protein LOC105159245 [Sesamum indicum])

HSP 1 Score: 128.3 bits (321), Expect = 2.1e-26
Identity = 73/137 (53.28%), Postives = 99/137 (72.26%), Query Frame = 2


Query: 197 MHSRDKRAKAGSSR-DSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKGIESRKIVSLGGK 256
           M  + K AK GSS  D    E +M +++I K+IEFL SSHM+WK+KK +E+RK+VSLGGK
Sbjct: 1   MPMKKKEAKGGSSAPDVAPEEPKMDIKSILKDIEFLGSSHMTWKEKKDLENRKVVSLGGK 60

Query: 257 PQKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMAXXXXXXXXXXXXXPEEQVLK 316
           P KKQRLPLSVAR  MKKQKER++K++QE + + +FG  +             PE++VL+
Sbjct: 61  PPKKQRLPLSVARVTMKKQKERDEKLLQERAILGRFGAYS-SSGAKKVAQRRRPEDRVLR 120

Query: 317 SSEGFFKHGVLDVKHLL 376
           ++EG F++GVLDVKHLL
Sbjct: 121 ATEGNFRNGVLDVKHLL 136

Query: 377  436
           
Sbjct: 181  136

Query: 437  496
           
Sbjct: 241  136

Query: 497  556
           
Sbjct: 301  136

Query: 557  605
           
Sbjct: 361  136

[Close]

BLAST of MU48193 vs. NCBI nr
Match: gi|470110655|ref|XP_004291589.1| (PREDICTED: uncharacterized protein LOC101305037 [Fragaria vesca subsp. vesca])

HSP 1 Score: 126.3 bits (316), Expect = 8.0e-26
Identity = 71/140 (50.71%), Postives = 97/140 (69.29%), Query Frame = 2


Query: 185 NRNKMHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKGIESRKIVSL 244
           N    H++D+        DS D+ T M  R I K IE L SSHM+WK++K +E++K+V+L
Sbjct: 21  NNQNPHTKDQEL------DSNDLRTDM--REIYKRIELLGSSHMTWKERKELENKKVVAL 80

Query: 245 GGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMAXXXXXXXXXXXXXPEEQ 304
           GGKP KKQRLPLS+AR +MKKQK+REQK +QE+  + +FGG +             PE++
Sbjct: 81  GGKPPKKQRLPLSIARVVMKKQKDREQKQLQENVILGRFGGKS-RGGSKRSVEKRRPEDR 140

Query: 305 VLKSSEGFFKHGVLDVKHLL 364
           VL++SEG+FK+GVLDVKHLL
Sbjct: 141 VLRASEGYFKNGVLDVKHLL 151

Query: 365  424
           
Sbjct: 201  151

Query: 425  484
           
Sbjct: 261  151

Query: 485  544
           
Sbjct: 321  151

Query: 545  604
           
Sbjct: 381  151

The following BLAST results are available for this feature:

BLAST of MU48193 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEY3_CUCSA	6.8e-64	81.48	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G429080 PE=4 SV=1	[more]
I1J561_SOYBN	4.4e-31	56.12	Uncharacterized protein OS=Glycine max GN=GLYMA_01G027700 PE=4 SV=1	[more]
A0A0B2PZK2_GLYSO	4.4e-31	56.12	Uncharacterized protein OS=Glycine soja GN=glysoja_027159 PE=4 SV=1	[more]
W9QRW5_9ROSA	1.2e-28	53.33	Uncharacterized protein OS=Morus notabilis GN=L484_013553 PE=4 SV=1	[more]
A0A0B2RAR7_GLYSO	2.7e-28	53.96	Uncharacterized protein OS=Glycine soja GN=glysoja_008398 PE=4 SV=1	[more]

BLAST of MU48193 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44820.2	7.7e-27	46.32	unknown protein	[more]

BLAST of MU48193 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444843\|ref\|XP_004140183.1\|	5.9e-61	81.48	PREDICTED: uncharacterized protein LOC101203308 [Cucumis sativus]	[more]
gi\|659097445\|ref\|XP_008449630.1\|	5.9e-61	81.48	PREDICTED: serine/arginine-rich splicing factor 4 [Cucumis melo]	[more]
gi\|356497496\|ref\|XP_003517596.1\|	5.0e-28	56.12	PREDICTED: uncharacterized protein LOC100819044 [Glycine max]	[more]
gi\|747040299\|ref\|XP_011074585.1\|	2.1e-26	53.28	PREDICTED: uncharacterized protein LOC105159245 [Sesamum indicum]	[more]
gi\|470110655\|ref\|XP_004291589.1\|	8.0e-26	50.71	PREDICTED: uncharacterized protein LOC101305037 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR027973	DUF4602

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C014544	MELO3C014544	gene
MELO3C014545	MELO3C014545	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
HS30H08	HS30H08	EST
PSI40E07	PSI40E07	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027973	Protein of unknown function DUF4602	PFAM	PF15375	DUF4602	coord: 67..177 score: 1.9
None	No IPR available	PANTHER	PTHR28096	FAMILY NOT NAMED	coord: 69..243 score: 2.5