Cucsa.086830 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.086830
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Imidazole glycerol phosphate synthase subunit HisH
Location	scaffold00873 : 213658 .. 216487 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGCTTACTCCCTCGACCAGCGGCCGCACGTCCGATCAGCTGCTCTGTTTTTAGTTTTCTTCTATCTTATCTTCCTCCGTATTGCCGTCGCCTATCACCGTCACGCCCTCACCGACTTTCCTTTCTCCTCTTCTTATCTCACTCTCTGCTGCAACCTCCGGCTGCCACGCCTACTCCTTCTTCCGCTGCAATCCTCTGTCAATCGGTAGGTTGCTTTCCGCATCTGCCTGGTTCATTGGAATAATTCTTTGATTCAACTTACTTTGATTTTAAGTAGGTTACATTGTTATCAGGTGAATTTTGATTGAAATTCCTGCCAAAACCGATCTTTTTTtAATGGAAAATTTTTGTTTATTTTTTTtCCGGCATTTGTCTTAAATTTTATCTCTTTTTTTTtCTGATTATTTTTCCCCTCTTAATGTTCTTTGCTTCGCAGTAACAAGATGCATTCCAGGGATAAAAGGGCAAAAGCAGGATCATCTAGGGACTCGACAGATATGGAAACTCAAATGAAAATGAGAAATATCAAGAAAGAAATTGAATTCCTCAGTAATTTCTTTTTTtCCCTCAGAATTCAGCTTATTTATCTGTGCATATATGATACATAAAGAATTTTACATGCGAAAAATGTACTACAAAACTTGATGCTGTATTGTATTAACAACCCACATTGCCTTTTTCTATTTTGTGTTCTCTGATGCAAAACACAGACTACTTTATTTCAATTGAAGCAACGGAGTAATTTTTCTTTTAGTTGAAAAATCTTAGCATTCTATTATAATTGTAGTGCAGTGAATCCTCTGAGCCCGTGAAAAATGAATGTCTATACTAATTATTGTAGTGTAAGAGGATTATAGTGAAGAGCTTTGGTAGTGTGATTTTAGTTAGCAATCATACATGAGATGTAAGGTCAAGCTCCAAAGAAATCGAATAGAGGTTGGAAACACCGGCAAATTTACCCTAGGCCCAGTCGTGTTCAAGCCCCCCTCAACTGTATGCTCTTTATATGATATATATGTATATAAATCCAACATAATACCAACACCATTGGCTAGACTAGTACATATGGATTCTAGCCTCTGTTAGACCCAAGTTCAAGCCTATTTCTTACATTTTTTTCAGATTATTTTTTTTtGTATTATGAAGCCCCTGTCAACAATTTTTTGGATCCGCCATTGGTTGGAACTGTATTGAACTTGCATAATCACATTTCCTTTCAGATTCTGTTTGTGTACAAACTTCTTTTAGACCATCTTCATGATCACACCTTCTCATAGGGCAGTTTACCTTGCTTTCTTAGTTCCCCCTCAGGCCTTGTTCCAATTGTTATTGACCAAAATATTTAGACCCGTTGGAGACAAGATTTGTAAAACTATTTTCTTTTAGTTTTCAAAGAACTTATTTTTTATTACATCGGCACAAAATGAATAAGAAAACAAAGAAACTTTAAGGTGTAAGCAGTGTTTGTATGCTTATTTTTCGAAAAGTCAAAGTAAACAATGAAATGGTTATCAAACGAGGTCTTAGTGATTGGTCTAACTAATGTTAGTTGGTTAATCCTCACCATTTGTTTGGAGAAAATGTCTAGTTCTATGGTATTATATACTCCTTAAATTTTGCATTGACATGTCATTACATGATGTATTATCCATTCATAGGTCCCACACCATCCATTTTTAAATGCTTCCTTTATGGAAAGCAACGAATATTGATTGTATGGAAAAAaTTGACACTACTAGCATAGACTCTAGTACTAGAAAATCTCTCTTGTGTGTTGTGTTTTTGTGTGGAGGGTTGAATAGAAGGTAATGAAGAAAAAATGTGAAAGTATAAAGCAGCTTATTTGTTTTTGTATTCTTTATTTCAGCCTCCTCTCATATGTCATGGAAAGACAAAAAGGAGATTGAGAGTAGAAAAATTGTTTCTCTGGGTGGAAAGGTACGAACTCAACTATGGATATGTCATATGCATTCTGTAGGCTCAATTGATTATGGGATCCTGAATGAATGTAATTTTAAAGTCTTACAACTATTGCTTTTAGACCATCAATCTTGTTTTACCATCTTGCAGCCTCAAAAGAAGCAAAGACTGCCTTTAAGTGTAGCACGACCAATCATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGGTAAGGAAATCCATATGATAGGTGACTTCCGTGGTTAAATGTTTGATAAATATCAGTTTATACCCTTAAACTTTTCGTTATCGGTCGTTGGCACACCATTTGGTATCTAAATTTTTGTCCAAGATTTTAAAAATTTCTGACTCCAAGAGTATTTTTGGAATGTTTATATGCAACTTTCGGAAGTATAAGAGTTTAATGGCAAAGTTCAAAGGCATTAGTTCAACCATGTTTTTTCGTTCTTCTTTTTTTCTTAACCTACATCTTCTGTTATTTGCAGCACTCTAGTGTTAGACAATTTGGTGGGATGGCTAGTAGTAGCAATTCGAGAAAATCTTCGGGGAAGCGTAGGCCGGAGGAGCAGGTTCTAAAGTCGAGTGAAGGCTTTTTTAAACATGGTGTGCTTGATGTGAAGCATTTACTACGCCCATCTTCTTCTAGAAATAATGGCCATTCCAGGAATAGTGATCCTTTTAGGAACACTGACTTTGGAAATGAAATGGGCGGTTTAGGTAGAAGAAAAGGAGGAAAAAAGAAGAATAACAAAAGTAAGAAAAAGGGTGGCGGTAAGAAACGCCATTGAAATTGAACATTATAGTTTTACAATGAGAATATGGATATCTTTTTTtGTCACATTTGTTGTAATTCAATGAAATTTTGCATTTTCATGTTTCT

mRNA sequence

TGTGCTTACTCCCTCGACCAGCGGCCGCACGTCCGATCAGCTGCTCTGTTTTTAGTTTTCTTCTATCTTATCTTCCTCCGTATTGCCGTCGCCTATCACCGTCACGCCCTCACCGACTTTCCTTTCTCCTCTTCTTATCTCACTCTCTGCTGCAACCTCCGGCTGCCACGCCTACTCCTTCTTCCGCTGCAATCCTCTGTCAATCGTAACAAGATGCATTCCAGGGATAAAAGGGCAAAAGCAGGATCATCTAGGGACTCGACAGATATGGAAACTCAAATGAAAATGAGAAATATCAAGAAAGAAATTGAATTCCTCACCTCCTCTCATATGTCATGGAAAGACAAAAAGGAGATTGAGAGTAGAAAAATTGTTTCTCTGGGTGGAAAGCCTCAAAAGAAGCAAAGACTGCCTTTAAGTGTAGCACGACCAATCATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGCACTCTAGTGTTAGACAATTTGGTGGGATGGCTAGTAGTAGCAATTCGAGAAAATCTTCGGGGAAGCGTAGGCCGGAGGAGCAGGTTCTAAAGTCGAGTGAAGGCTTTTTTAAACATGGTGTGCTTGATGTGAAGCATTTACTACGCCCATCTTCTTCTAGAAATAATGGCCATTCCAGGAATAGTGATCCTTTTAGGAACACTGACTTTGGAAATGAAATGGGCGGTTTAGGTAGAAGAAAAGGAGGAAAAAAGAAGAATAACAAAAGTAAGAAAAAGGGTGGCGGTAAGAAACGCCATTGAAATTGAACATTATAGTTTTACAATGAGAATATGGATATCTTTTTTTGTCACATTTGTTGTAATTCAATGAAATTTTGCATTTTCATGTTTCT

Coding sequence (CDS)

ATGCATTCCAGGGATAAAAGGGCAAAAGCAGGATCATCTAGGGACTCGACAGATATGGAAACTCAAATGAAAATGAGAAATATCAAGAAAGAAATTGAATTCCTCACCTCCTCTCATATGTCATGGAAAGACAAAAAGGAGATTGAGAGTAGAAAAATTGTTTCTCTGGGTGGAAAGCCTCAAAAGAAGCAAAGACTGCCTTTAAGTGTAGCACGACCAATCATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGCACTCTAGTGTTAGACAATTTGGTGGGATGGCTAGTAGTAGCAATTCGAGAAAATCTTCGGGGAAGCGTAGGCCGGAGGAGCAGGTTCTAAAGTCGAGTGAAGGCTTTTTTAAACATGGTGTGCTTGATGTGAAGCATTTACTACGCCCATCTTCTTCTAGAAATAATGGCCATTCCAGGAATAGTGATCCTTTTAGGAACACTGACTTTGGAAATGAAATGGGCGGTTTAGGTAGAAGAAAAGGAGGAAAAAAGAAGAATAACAAAAGTAAGAAAAAGGGTGGCGGTAAGAAACGCCATTGA

Protein sequence

MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKSSEGFFKHGVLDVKHLLRPSSSRNNGHSRNSDPFRNTDFGNEMGGLGRRKGGKKKNNKSKKKGGGKKRH*

Homology

[Close]

BLAST of Cucsa.086830 vs. TrEMBL
Match: A0A0A0KEY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G429080 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 9.7e-102
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1


Query: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60
           MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP
Sbjct: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS 120
           QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS 120

Query: 121 SEGFFKHGVLDVKHLLRPSSSRNNGHSRNSDPFRNTDFGNEMGGLGRRKGGKKKNNKSKK 180
           SEGFFKHGVLDVKHLLRPSSSRNNGHSRNSDPFRNTDFGNEMGGLGRRKGGKKKNNKSKK
Sbjct: 121 SEGFFKHGVLDVKHLLRPSSSRNNGHSRNSDPFRNTDFGNEMGGLGRRKGGKKKNNKSKK 180

Query: 181 KGGGKKRH 189
           KGGGKKRH
Sbjct: 181 KGGGKKRH 188

[Close]

BLAST of Cucsa.086830 vs. TrEMBL
Match: I1J561_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G027700 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.0e-43
Identity = 101/188 (53.72%), Postives = 130/188 (69.15%), Query Frame = 1


Query: 1   MHSRDKRAKA-GSSRDSTDMETQ-MKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGG 60
           MH   K+A   G+ R+ TDM+ Q M +R I K++E  + SHMSWK++K+IE+R +VSLGG
Sbjct: 4   MHKNRKQAGGHGTPREETDMQEQEMDIRKIMKDVENFSYSHMSWKERKKIENRNVVSLGG 63

Query: 61  KPQKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVL 120
           KPQK QRLPLSVARP+MKKQKEREQKM+QE   + QFGG    S S++S+GK +PE + L
Sbjct: 64  KPQKNQRLPLSVARPMMKKQKEREQKMLQERLILGQFGGKLGGS-SKRSAGKHKPENRGL 123

Query: 121 KSSEGFFKHGVLDVKHLLRPSSSRNNGHSRNSDPFRNTDFGNEMGGLGRRKGGKKKNNKS 180
           KSSEG F++G+L+VKHLL            NS P R+ + G  M    + KGGKKKN+  
Sbjct: 124 KSSEGHFRNGILNVKHLL------------NSAPSRDRETGTNMSNAWKGKGGKKKNS-- 175

Query: 181 KKKGGGKK 187
             KGGGKK
Sbjct: 184 -NKGGGKK 175

[Close]

BLAST of Cucsa.086830 vs. TrEMBL
Match: A0A0B2PZK2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_027159 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.0e-43
Identity = 101/188 (53.72%), Postives = 130/188 (69.15%), Query Frame = 1


Query: 1   MHSRDKRAKA-GSSRDSTDMETQ-MKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGG 60
           MH   K+A   G+ R+ TDM+ Q M +R I K++E  + SHMSWK++K+IE+R +VSLGG
Sbjct: 4   MHKNRKQAGGHGTPREETDMQEQEMDIRKIMKDVENFSYSHMSWKERKKIENRNVVSLGG 63

Query: 61  KPQKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVL 120
           KPQK QRLPLSVARP+MKKQKEREQKM+QE   + QFGG    S S++S+GK +PE + L
Sbjct: 64  KPQKNQRLPLSVARPMMKKQKEREQKMLQERLILGQFGGKLGGS-SKRSAGKHKPENRGL 123

Query: 121 KSSEGFFKHGVLDVKHLLRPSSSRNNGHSRNSDPFRNTDFGNEMGGLGRRKGGKKKNNKS 180
           KSSEG F++G+L+VKHLL            NS P R+ + G  M    + KGGKKKN+  
Sbjct: 124 KSSEGHFRNGILNVKHLL------------NSAPSRDRETGTNMSNAWKGKGGKKKNS-- 175

Query: 181 KKKGGGKK 187
             KGGGKK
Sbjct: 184 -NKGGGKK 175

[Close]

BLAST of Cucsa.086830 vs. TrEMBL
Match: V4S1Z0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006059mg PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.5e-41
Identity = 97/190 (51.05%), Postives = 127/190 (66.84%), Query Frame = 1


Query: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60
           MH   +R      RD    + +M  R I K+IEFL SSHMSWK++KE+E++++VSLGGK 
Sbjct: 1   MHKNKQR------RDMETKDEEMDFRKIMKDIEFLGSSHMSWKERKELENKRVVSLGGKA 60

Query: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS 120
            KKQRLPLSVAR  MK+QKEREQKM +E + + +FG  A  +  ++++ +R+PE++VLKS
Sbjct: 61  SKKQRLPLSVARVPMKRQKEREQKMQEERAILGRFG--AKFAGPKRATERRKPEDRVLKS 120

Query: 121 SEGFFKHGVLDVKHLLRPSSSRNNGHSRNSDPFRNTDFGNEMGGLGRRKGGK--KKNNKS 180
           SEG F++GVLDVKHLLRP             P R+T+    MGG G  KGGK  K+ N  
Sbjct: 121 SEGHFRNGVLDVKHLLRPG------------PSRDTESSKHMGGKGGNKGGKKGKQKNHG 170

Query: 181 KKKGGGKKRH 189
           K KGG KKRH
Sbjct: 181 KNKGGKKKRH 170

[Close]

BLAST of Cucsa.086830 vs. TrEMBL
Match: A0A0V0HDB3_SOLCH (Putative axoneme-associated protein-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 7.3e-41
Identity = 94/170 (55.29%), Postives = 128/170 (75.29%), Query Frame = 1


Query: 20  ETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQK 79
           E +M  ++I KE EFL S+HM+WK+KKE+E+RK+V+LGGKPQKKQRLPLSVAR +MKKQK
Sbjct: 5   EQRMDFKSIMKEAEFLGSAHMTWKEKKELENRKVVALGGKPQKKQRLPLSVARVMMKKQK 64

Query: 80  EREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKSSEGFFKHGVLDVKHLLRPS 139
           ERE+KM +E+  + +FGG   +S+SRK++G+RRPE++VLKS+EG F++GVLDVK LL+PS
Sbjct: 65  EREEKMQEENLVLGRFGG---ASSSRKAAGRRRPEDRVLKSTEGNFRNGVLDVKQLLKPS 124

Query: 140 SSRNNGHSRNSDPFRNTDFGNEMGGLGRRKGGKKKNNKSKKKGG-GKKRH 189
           + +    +   D  ++   G    G  ++KGGKK   K  K GG GKKRH
Sbjct: 125 APK----ASFDDGKKSFSSGK---GKKKKKGGKKNKGKKNKGGGRGKKRH 164

[Close]

BLAST of Cucsa.086830 vs. TAIR10
Match: AT2G44820.2 (AT2G44820.2 unknown protein)

HSP 1 Score: 162.9 bits (411), Expect = 1.9e-40
Identity = 96/194 (49.48%), Postives = 128/194 (65.98%), Query Frame = 1


Query: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60
           ++ R    K      ST ++  +  +NI K++    SSHM+WKDKK +E +K+ +LGGK 
Sbjct: 2   VYKRKSMEKKKEGMGST-IDQNLSFKNIMKDVALFGSSHMTWKDKKALEDKKVTALGGKA 61

Query: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS 120
           QK  RLPLSVAR  MKKQK+RE+KM++++  + +FGG  SSS  + +  KR PEE+VLKS
Sbjct: 62  QKMHRLPLSVARVQMKKQKDREEKMLEQNVILGRFGGGGSSSR-KPAERKRTPEERVLKS 121

Query: 121 SEGFFKHGVLDVKHLLR--PSSS--RNNGHSRNSDPFRNTDFGNEMGGL---GRRKGGKK 180
           + G FK GVLDVKHLLR  PSSS  R+    + S   +N   G + GG+   G++KGGK 
Sbjct: 122 TGGIFKGGVLDVKHLLRSGPSSSSDRDFKTKKPSRVEKNLGGGGDGGGIKSKGKKKGGKN 181

Query: 181 KNNKSKKKGGGKKR 188
           K NK KKKGGGKKR
Sbjct: 182 K-NKGKKKGGGKKR 192

[Close]

BLAST of Cucsa.086830 vs. NCBI nr
Match: gi|449444843|ref|XP_004140183.1| (PREDICTED: uncharacterized protein LOC101203308 [Cucumis sativus])

HSP 1 Score: 377.5 bits (968), Expect = 1.4e-101
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1


Query: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60
           MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP
Sbjct: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS 120
           QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS 120

Query: 121 SEGFFKHGVLDVKHLLRPSSSRNNGHSRNSDPFRNTDFGNEMGGLGRRKGGKKKNNKSKK 180
           SEGFFKHGVLDVKHLLRPSSSRNNGHSRNSDPFRNTDFGNEMGGLGRRKGGKKKNNKSKK
Sbjct: 121 SEGFFKHGVLDVKHLLRPSSSRNNGHSRNSDPFRNTDFGNEMGGLGRRKGGKKKNNKSKK 180

Query: 181 KGGGKKRH 189
           KGGGKKRH
Sbjct: 181 KGGGKKRH 188

[Close]

BLAST of Cucsa.086830 vs. NCBI nr
Match: gi|659097445|ref|XP_008449630.1| (PREDICTED: serine/arginine-rich splicing factor 4 [Cucumis melo])

HSP 1 Score: 371.3 bits (952), Expect = 9.9e-100
Identity = 186/188 (98.94%), Postives = 186/188 (98.94%), Query Frame = 1


Query: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60
           MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP
Sbjct: 1   MHSRDKRAKAGSSRDSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKP 60

Query: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS 120
           QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS
Sbjct: 61  QKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKS 120

Query: 121 SEGFFKHGVLDVKHLLRPSSSRNNGHSRNSDPFRNTDFGNEMGGLGRRKGGKKKNNKSKK 180
           SEGFFKHGVLDVKHLLRPSSSRNNG SRNSDPFRNTDFGNEMGG GRRKGGKKKNNKSKK
Sbjct: 121 SEGFFKHGVLDVKHLLRPSSSRNNGPSRNSDPFRNTDFGNEMGGKGRRKGGKKKNNKSKK 180

Query: 181 KGGGKKRH 189
           KGGGKKRH
Sbjct: 181 KGGGKKRH 188

[Close]

BLAST of Cucsa.086830 vs. NCBI nr
Match: gi|470110655|ref|XP_004291589.1| (PREDICTED: uncharacterized protein LOC101305037 [Fragaria vesca subsp. vesca])

HSP 1 Score: 184.9 bits (468), Expect = 1.3e-43
Identity = 97/174 (55.75%), Postives = 128/174 (73.56%), Query Frame = 1


Query: 15  DSTDMETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPI 74
           DS D+ T M  R I K IE L SSHM+WK++KE+E++K+V+LGGKP KKQRLPLS+AR +
Sbjct: 33  DSNDLRTDM--REIYKRIELLGSSHMTWKERKELENKKVVALGGKPPKKQRLPLSIARVV 92

Query: 75  MKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKSSEGFFKHGVLDVKH 134
           MKKQK+REQK +QE+  + +FGG  S   S++S  KRRPE++VL++SEG+FK+GVLDVKH
Sbjct: 93  MKKQKDREQKQLQENVILGRFGG-KSRGGSKRSVEKRRPEDRVLRASEGYFKNGVLDVKH 152

Query: 135 LLRPSSSRNNGHSRNSDPFRNTDFGNEMGGLGRRKGGKKKNNKSKKKGGGKKRH 189
           LLRP+SSR+       D   + +F     G G++ GGKK   K+K K GGKKRH
Sbjct: 153 LLRPTSSRDR------DGGAHVNFTGPKKGGGKKGGGKKGGGKNKGKKGGKKRH 197

[Close]

BLAST of Cucsa.086830 vs. NCBI nr
Match: gi|356497496|ref|XP_003517596.1| (PREDICTED: uncharacterized protein LOC100819044 [Glycine max])

HSP 1 Score: 182.2 bits (461), Expect = 8.5e-43
Identity = 101/188 (53.72%), Postives = 130/188 (69.15%), Query Frame = 1


Query: 1   MHSRDKRAKA-GSSRDSTDMETQ-MKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGG 60
           MH   K+A   G+ R+ TDM+ Q M +R I K++E  + SHMSWK++K+IE+R +VSLGG
Sbjct: 4   MHKNRKQAGGHGTPREETDMQEQEMDIRKIMKDVENFSYSHMSWKERKKIENRNVVSLGG 63

Query: 61  KPQKKQRLPLSVARPIMKKQKEREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVL 120
           KPQK QRLPLSVARP+MKKQKEREQKM+QE   + QFGG    S S++S+GK +PE + L
Sbjct: 64  KPQKNQRLPLSVARPMMKKQKEREQKMLQERLILGQFGGKLGGS-SKRSAGKHKPENRGL 123

Query: 121 KSSEGFFKHGVLDVKHLLRPSSSRNNGHSRNSDPFRNTDFGNEMGGLGRRKGGKKKNNKS 180
           KSSEG F++G+L+VKHLL            NS P R+ + G  M    + KGGKKKN+  
Sbjct: 124 KSSEGHFRNGILNVKHLL------------NSAPSRDRETGTNMSNAWKGKGGKKKNS-- 175

Query: 181 KKKGGGKK 187
             KGGGKK
Sbjct: 184 -NKGGGKK 175

[Close]

BLAST of Cucsa.086830 vs. NCBI nr
Match: gi|697099033|ref|XP_009629745.1| (PREDICTED: axoneme-associated protein mst101(2) [Nicotiana tomentosiformis])

HSP 1 Score: 181.4 bits (459), Expect = 1.5e-42
Identity = 94/169 (55.62%), Postives = 127/169 (75.15%), Query Frame = 1


Query: 20  ETQMKMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQK 79
           ET+M  ++I KE+E+L S+HM+WK+KKE+E++KIVSLGGKPQKKQRLPLSVAR +MKKQK
Sbjct: 5   ETKMDFKSILKEVEYLGSAHMTWKEKKELENKKIVSLGGKPQKKQRLPLSVARVMMKKQK 64

Query: 80  EREQKMVQEHSSVRQFGGMASSSNSRKSSGKRRPEEQVLKSSEGFFKHGVLDVKHLLRPS 139
           ERE+K+ +E+  + +FGG  S S+SRK++G+RRPE++VLKS+EG F++GVLDVK LL+PS
Sbjct: 65  EREEKIQEENLILGRFGG-NSGSSSRKAAGRRRPEDRVLKSTEGHFRNGVLDVKDLLKPS 124

Query: 140 SSRNNGHSRNSDPFRNTDFGNEMGGLGRRKGGKKKNNKSKKKGGGKKRH 189
           + +           +  D        G++K G KKN   KKKG GKKRH
Sbjct: 125 APKAP---------KAFDAKQSFASKGKKKKGGKKNKGKKKKGPGKKRH 163

The following BLAST results are available for this feature:

BLAST of Cucsa.086830 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEY3_CUCSA	9.7e-102	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G429080 PE=4 SV=1	[more]
I1J561_SOYBN	6.0e-43	53.72	Uncharacterized protein OS=Glycine max GN=GLYMA_01G027700 PE=4 SV=1	[more]
A0A0B2PZK2_GLYSO	6.0e-43	53.72	Uncharacterized protein OS=Glycine soja GN=glysoja_027159 PE=4 SV=1	[more]
V4S1Z0_9ROSI	1.5e-41	51.05	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006059mg PE=4 SV=1	[more]
A0A0V0HDB3_SOLCH	7.3e-41	55.29	Putative axoneme-associated protein-like OS=Solanum chacoense PE=4 SV=1	[more]

BLAST of Cucsa.086830 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44820.2	1.9e-40	49.48	unknown protein	[more]

BLAST of Cucsa.086830 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444843\|ref\|XP_004140183.1\|	1.4e-101	100.00	PREDICTED: uncharacterized protein LOC101203308 [Cucumis sativus]	[more]
gi\|659097445\|ref\|XP_008449630.1\|	9.9e-100	98.94	PREDICTED: serine/arginine-rich splicing factor 4 [Cucumis melo]	[more]
gi\|470110655\|ref\|XP_004291589.1\|	1.3e-43	55.75	PREDICTED: uncharacterized protein LOC101305037 [Fragaria vesca subsp. vesca]	[more]
gi\|356497496\|ref\|XP_003517596.1\|	8.5e-43	53.72	PREDICTED: uncharacterized protein LOC100819044 [Glycine max]	[more]
gi\|697099033\|ref\|XP_009629745.1\|	1.5e-42	55.62	PREDICTED: axoneme-associated protein mst101(2) [Nicotiana tomentosiformis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027973	DUF4602

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.086830.1	Cucsa.086830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027973	Protein of unknown function DUF4602	PFAM	PF15375	DUF4602	coord: 6..111 score: 1.2
None	No IPR available	PANTHER	PTHR28096	FAMILY NOT NAMED	coord: 3..177 score: 4.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.086830	Cla008592	Watermelon (97103) v1	cgywmB099
Cucsa.086830	Csa6G429080	Cucumber (Chinese Long) v2	cgycuB089
Cucsa.086830	MELO3C014544	Melon (DHL92) v3.5.1	cgymeB098
Cucsa.086830	ClCG02G022680	Watermelon (Charleston Gray)	cgywcgB096
Cucsa.086830	CSPI06G23670	Wild cucumber (PI 183967)	cgycpiB092
Cucsa.086830	CmaCh20G001240	Cucurbita maxima (Rimu)	cgycmaB0166
Cucsa.086830	CmoCh20G001330	Cucurbita moschata (Rifu)	cgycmoB0161
Cucsa.086830	Lsi10G011090	Bottle gourd (USVL1VR-Ls)	cgylsiB095
Cucsa.086830	Cp4.1LG16g08370	Cucurbita pepo (Zucchini)	cgycpeB0160
Cucsa.086830	MELO3C014544.2	Melon (DHL92) v3.6.1	cgymedB097
Cucsa.086830	CsaV3_6G038800	Cucumber (Chinese Long) v3	cgycucB091
Cucsa.086830	Cla97C02G048770	Watermelon (97103) v2	cgywmbB093
Cucsa.086830	Bhi10G000178	Wax gourd	cgywgoB110
Cucsa.086830	Carg06865	Silver-seed gourd	carcgyB0595

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.086830	Cucurbita pepo (Zucchini)	cgycpeB0161
Cucsa.086830	Silver-seed gourd	carcgyB1036
Cucsa.086830	Cucurbita maxima (Rimu)	cgycmaB0167
Cucsa.086830	Cucurbita moschata (Rifu)	cgycmoB0162