MELO3C012624.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C012624.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionLOB domain-containing 4-like protein
Locationchr01 : 21531991 .. 21534727 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTCTAGCTGACTCATTTTTTCTTAATTTTGCCTTTTAATTTTCCCCCCAATACTTAAACAAAATTCACTTCTTTCTTTGAGTTTCAGTTTAATTCTTCATGTGGGTTTTACTCGCACAATATATTAGTACAGTTAATTAGCAAGCTAAGATCAATTTCAGAAGATAGTAATATTATTATAGTACTGATCATCAAATTAAATGGCATCGTCGGAGATGATGATGAGTGGGAGCTGCAAAAAGGGGAATGGTGCAGCCGCGCCGTGCGCTGCCTGCAAGCTTTTGCGGCGGCGGTGTGCTCACGACTGTGTGTTTGCTCCTTATTTTCCGGCGGATCATCCCCACAAATTCTCCAGTGTTCACAAAGTCTTTGGTGCTAGTAATGTCAGCAAATTGTTGCAGGTTCATTCCAATGATCTCCTTTCTCTCTTTTATTCTGAGTAGGACAAAAATGATTTTTAACTATTGGAAAATCACTTAATTTAACCCATCAAGAATACGAGGATATCCTCATTAATTACCCTAAAAATGGTATTGCGATCTCTACTCATTTTCTCCTATATATTGAAAATAACTATGTTAGAAAATTAGGGAAAGTTTTTTTAGTACTGCTGCAATATCTATTTTTCCACCTCTCTTCTCATCGGATTCTATATCATTTCTAGTGGGGTGAGAATTTAATGATAGGAGTAATATGTGAATTGTTTTATTGTATTGAAATTTTTTTTTTAAAAACGAGTGAGATAATTATCTAATGTGTAGTTAATATTGAATTATGATCCAATCCAATATTTGCGTTAGAGAGTTTAAATCATTAGTCATGAATTTTGAGAATTTTTTTTTCTTTTGTCTATTTTTGTGGCTACCTAAAACTATGTAATTAATTTCATTTTGGTATCTAATCTAATAGCTGCTAAATTTAAAATTTGTAAAAACTACTTCATCATGTAGATATTATACATCTAAATTTTATGCCTAATAGAATTCAACAGTTCTAACTTTTTTTTTTTTTTGTCTAGTCCCTAATTTAGGGGCTAAAATTTGAATTTTGGAAATTGAAGGATTAAGAAAACTTATAATTTAATATAAAATATAAATTGTTTTGGCCAACCCAGTATAACGTGTCTTTTAGTAATGGAGTTCTTTCTCTACTTTTAAAAAGCAAGAGAAGGCTATCTTTTGCAAATTCTTCTACATCTCACATGTAAGAAAGAAAAGGGTTTGTTTTAGGTGTCCGGATTAGAGACGAATAATTTAAAAGGATTGCATGTTAAATTTTAATAAATGTTAAAAAAGAAAAAAAAAAAATTGATGCTCTATTATGCTTGCTTATTCAGAGTGGAATTAATAAATCTATGTTTTTAGCTAGGTACTTTATCATTTTATTTGGTTTTTTTTTTTTTAATTTTGAAATGTTTTCTTTAAAAAAGAAAAAACAAACAAAATTGGTCTCAAACTTTTGGTCGTGTGGGAATTGTTACAAGTGAGCACTCCAATAAAATGTAATTTATTTGAATTTACACTTTTTTGTTGTTGTGTGTTGTGTTGTTGGTTTTGGCGTGGGGTTAATAGAATGATAGAGATGTTTCGTCTAATAGGTGTGGCGGGAAACTTTTAACAAATCTAATATATACTTTTTAATCACTAACTATTGGCGTAATGCTGACGTTTTAATCATTTCTACAGTGAATGGAGGCTTAAACGTCATGTCGTCCATCTTTTCCATCTCCCCAGCTACACCGACAACGCCCTTTTAACCTTCTTCGTTTTTTAAGTCCAAAGTTATATATAAATATACATATATAGAAACATTTTTATACCAATCATCCATGTTCTATTTATTTGTAGTTGCTTAAATAATTAATGACACCCTTCAAAAATAAATGAAAGTTAACTCGTCAACAAGCACTTTGGGTTTTAACCTCTCTTCTAACCCTAATCAGATGGCCATCTTCATTTTCCTTTACTCCATTGCAGTATTTCGTGGGAGAAGTACAACAACGTTGTTGAAGAGGGAAGAAAACTTAAATTATGATAGATGTGGCCATCCTATTAGGGATATATAACTATTTCTGTGGCCAGAGAGAGATTAACGGATATAATGTAATATATAAATGTGGTGAGTGCGCTTTGACGTAAATATAAGGTTAGTTATCATTTATCTTTTTAGGATGGGTCATTGATCATTGATCATTTGAGGGACATTTGTACAAAAATTTCTCAAAACAACCTTGTTCTCTTTTATGTATTATATATTTAGGTGTAATGGATAAGTAAGAGTATACGAGAATTTGAACCTCTCGTGTTTAGAAAATGAGGACATGTGAAGTTCTTCGTCTCAATAATTATTTGTTTATTTTATTTTTTTACTTTTCTAGAAGCCTTGAATTATAGTTTAGAGAGTTTCCAGAATTGATATATGACAATTTTGTGATGGGCATGTTGAATAATCCAGGAGTTGCCAGAGCAGCAACGGAGCGATGCAGTAAGTTCGATGGTATATGAGGCAAATGCAAGGATTCGAGATCCGGTGTACGGATGCGTGGGAACAATATCATGTCTACAACAGCAAGTGGATGCATTGCAGCAACAACTAGCAATAACACAGGCCCAACTGGTTCAATTGAAAATGGGGCAATTTACAACAACATCACAATCATCATCTAGTACAGATGACTTCCTTTCTCCTCCGCCCAATATCAATGTGGCCGCATCCTCATCATTATGGTCCTGCTAG

mRNA sequence

CTCTCTAGCTGACTCATTTTTTCTTAATTTTGCCTTTTAATTTTCCCCCCAATACTTAAACAAAATTCACTTCTTTCTTTGAGTTTCAGTTTAATTCTTCATGTGGGTTTTACTCGCACAATATATTAGTACAGTTAATTAGCAAGCTAAGATCAATTTCAGAAGATAGTAATATTATTATAGTACTGATCATCAAATTAAATGGCATCGTCGGAGATGATGATGAGTGGGAGCTGCAAAAAGGGGAATGGTGCAGCCGCGCCGTGCGCTGCCTGCAAGCTTTTGCGGCGGCGGTGTGCTCACGACTGTGTGTTTGCTCCTTATTTTCCGGCGGATCATCCCCACAAATTCTCCAGTGTTCACAAAGTCTTTGGTGCTAGTAATGTCAGCAAATTGTTGCAGGAGTTGCCAGAGCAGCAACGGAGCGATGCAGTAAGTTCGATGGTATATGAGGCAAATGCAAGGATTCGAGATCCGGTGTACGGATGCGTGGGAACAATATCATGTCTACAACAGCAAGTGGATGCATTGCAGCAACAACTAGCAATAACACAGGCCCAACTGGTTCAATTGAAAATGGGGCAATTTACAACAACATCACAATCATCATCTAGTACAGATGACTTCCTTTCTCCTCCGCCCAATATCAATGTGGCCGCATCCTCATCATTATGGTCCTGCTAG

Coding sequence (CDS)

ATGGCATCGTCGGAGATGATGATGAGTGGGAGCTGCAAAAAGGGGAATGGTGCAGCCGCGCCGTGCGCTGCCTGCAAGCTTTTGCGGCGGCGGTGTGCTCACGACTGTGTGTTTGCTCCTTATTTTCCGGCGGATCATCCCCACAAATTCTCCAGTGTTCACAAAGTCTTTGGTGCTAGTAATGTCAGCAAATTGTTGCAGGAGTTGCCAGAGCAGCAACGGAGCGATGCAGTAAGTTCGATGGTATATGAGGCAAATGCAAGGATTCGAGATCCGGTGTACGGATGCGTGGGAACAATATCATGTCTACAACAGCAAGTGGATGCATTGCAGCAACAACTAGCAATAACACAGGCCCAACTGGTTCAATTGAAAATGGGGCAATTTACAACAACATCACAATCATCATCTAGTACAGATGACTTCCTTTCTCCTCCGCCCAATATCAATGTGGCCGCATCCTCATCATTATGGTCCTGCTAG

Protein sequence

MASSEMMMSGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQLVQLKMGQFTTTSQSSSSTDDFLSPPPNINVAASSSLWSC
Homology
[Close]
BLAST of MELO3C012624.2 vs. NCBI nr
Match: XP_008447124.1 (PREDICTED: LOB domain-containing protein 4-like [Cucumis melo])

HSP 1 Score: 275.4 bits (703), Expect = 1.2e-70
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0 

Query: 1   MASSEMMMSGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGAS 60
           MASSEMMMSGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGAS
Sbjct: 1   MASSEMMMSGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGAS 60

Query: 61  NVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQ 120
           NVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQ
Sbjct: 61  NVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQ 120

Query: 121 LVQLKMGQFTXXXXXXXXXXXXXXXXXXINVAASSSLWSC 161
           LVQLKMGQFTXXXXXXXXXXXXXXXXXXINVAASSSLWSC
Sbjct: 121 LVQLKMGQFTXXXXXXXXXXXXXXXXXXINVAASSSLWSC 160

[Close]
BLAST of MELO3C012624.2 vs. NCBI nr
Match: XP_004139827.1 (PREDICTED: LOB domain-containing protein 4-like [Cucumis sativus] >KGN44269.1 hypothetical protein Csa_7G237840 [Cucumis sativus])

HSP 1 Score: 225.7 bits (574), Expect = 1.1e-55
Identity = 140/162 (86.42%), Postives = 141/162 (87.04%), Query Frame = 0 

Query: 1   MASSEM--MMSGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG 60
           MASSEM             AAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG
Sbjct: 1   MASSEMXXXXXXXXXXXXXAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG 60

Query: 61  ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQ 120
           ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVG ISCLQQQVDALQQQLAITQ
Sbjct: 61  ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQ 120

Query: 121 AQLVQLKMGQFTXXXXXXXXXXXXXXXXXXINVAASSSLWSC 161
           AQLVQ+KMGQFTXXXXXXXXXXXXXXXXXX       SLWSC
Sbjct: 121 AQLVQMKMGQFTXXXXXXXXXXXXXXXXXXXXXXXXXSLWSC 162

[Close]
BLAST of MELO3C012624.2 vs. NCBI nr
Match: XP_022930643.1 (LOB domain-containing protein 4-like [Cucurbita moschata])

HSP 1 Score: 212.6 bits (540), Expect = 9.7e-52
Identity = 106/124 (85.48%), Postives = 113/124 (91.13%), Query Frame = 0 

Query: 7   MMSGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLL 66
           MM GSCKK  GA +PCAACKLLRRRC  DCVFAPYFPAD PHKFSSVHKVFGASNV+KLL
Sbjct: 5   MMKGSCKK--GAPSPCAACKLLRRRCTQDCVFAPYFPADQPHKFSSVHKVFGASNVTKLL 64

Query: 67  QELPEQQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQLVQLKM 126
           QELPEQ RSDAVSSMVYEANARIRDP+YGCVGTISCLQ+QVDALQQQLA+TQAQL+  KM
Sbjct: 65  QELPEQHRSDAVSSMVYEANARIRDPIYGCVGTISCLQRQVDALQQQLAMTQAQLLHFKM 124

Query: 127 GQFT 131
            QF+
Sbjct: 125 AQFS 126

[Close]
BLAST of MELO3C012624.2 vs. NCBI nr
Match: XP_023531527.1 (LOB domain-containing protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 211.5 bits (537), Expect = 2.2e-51
Identity = 105/124 (84.68%), Postives = 113/124 (91.13%), Query Frame = 0 

Query: 7   MMSGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLL 66
           MM GSCKK  GA +PCAACKLLRRRC  DCVFAPYFPAD PHKFSSVHKVFGASNV+KLL
Sbjct: 5   MMKGSCKK--GAPSPCAACKLLRRRCTQDCVFAPYFPADQPHKFSSVHKVFGASNVTKLL 64

Query: 67  QELPEQQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQLVQLKM 126
           QELPEQ RSDAVSS+VYEANARIRDP+YGCVGTISCLQ+QVDALQQQLA+TQAQL+  KM
Sbjct: 65  QELPEQHRSDAVSSLVYEANARIRDPIYGCVGTISCLQRQVDALQQQLAMTQAQLLHFKM 124

Query: 127 GQFT 131
            QF+
Sbjct: 125 AQFS 126

[Close]
BLAST of MELO3C012624.2 vs. NCBI nr
Match: XP_022969400.1 (LOB domain-containing protein 4-like [Cucurbita maxima])

HSP 1 Score: 199.1 bits (505), Expect = 1.1e-47
Identity = 107/145 (73.79%), Postives = 113/145 (77.93%), Query Frame = 0 

Query: 17  GAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSD 76
           GAA PCAACKLLRRRCA  CVFAPYFPA HPHK SSVH+VFGASNVSKLLQEL E QRSD
Sbjct: 2   GAATPCAACKLLRRRCAQHCVFAPYFPAHHPHKCSSVHEVFGASNVSKLLQELGEHQRSD 61

Query: 77  AVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQLVQLKMGQF-TXXXXX 136
           AVS MVYEANARIRD V GCVGTI+CLQ+QVDALQQ+LAITQAQL+QLKM QF +     
Sbjct: 62  AVSWMVYEANARIRDQVNGCVGTIACLQRQVDALQQKLAITQAQLLQLKMAQFSSAKSSS 121

Query: 137 XXXXXXXXXXXXXINVAASSSLWSC 161
                        INV AS SLWSC
Sbjct: 122 VGNLLLPPLPNININVGASPSLWSC 146

[Close]
BLAST of MELO3C012624.2 vs. TAIR10
Match: AT1G31320.1 (LOB domain-containing protein 4)

HSP 1 Score: 178.7 bits (452), Expect = 2.8e-45
Identity = 89/123 (72.36%), Postives = 104/123 (84.55%), Query Frame = 0 

Query: 8   MSGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQ 67
           M  S +K  GAA+PCAACKLLRRRCA DCVF+PYFPAD P KF++VH+VFGASNV+K+LQ
Sbjct: 1   MKESSRK-QGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQ 60

Query: 68  ELPEQQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQLVQLKMG 127
           ELP  QR DAVSSMVYEANAR+RDPVYGCVG IS LQQQ+D LQ QLA+ QA++V L++ 
Sbjct: 61  ELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVR 120

Query: 128 QFT 131
           Q T
Sbjct: 121 QST 122

[Close]
BLAST of MELO3C012624.2 vs. TAIR10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 166.4 bits (420), Expect = 1.4e-41
Identity = 78/112 (69.64%), Postives = 95/112 (84.82%), Query Frame = 0 

Query: 15  GNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQR 74
           G   ++PCA+CKLLRRRCA DC+FAPYFP D PHKF+ VHKVFGASNVSK+LQELP  QR
Sbjct: 2   GGPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQR 61

Query: 75  SDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQLVQLKM 127
           +DAV+S+V+EANAR+RDPVYGCVG IS LQ QV  LQ QLA+ QA+++ ++M
Sbjct: 62  ADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQM 113

[Close]
BLAST of MELO3C012624.2 vs. TAIR10
Match: AT1G16530.1 (ASYMMETRIC LEAVES 2-like 9)

HSP 1 Score: 154.1 bits (388), Expect = 7.4e-38
Identity = 74/107 (69.16%), Postives = 89/107 (83.18%), Query Frame = 0 

Query: 20  APCAACKLLRRRCAHD-CVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSDAV 79
           +PCA CKLLRR+C  D CVFAPYFPA  P+KF+ VHK+FGASNV+K+LQEL E  RSDAV
Sbjct: 13  SPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAV 72

Query: 80  SSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQLVQLK 126
            SMVYEANARI+DPVYGCVGTIS L +Q++ LQ QLA  QA+L+ ++
Sbjct: 73  DSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIR 119

[Close]
BLAST of MELO3C012624.2 vs. TAIR10
Match: AT2G40470.1 (LOB domain-containing protein 15)

HSP 1 Score: 146.0 bits (367), Expect = 2.0e-35
Identity = 74/125 (59.20%), Postives = 91/125 (72.80%), Query Frame = 0 

Query: 1   MASSEMMMSGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGAS 60
           MA     MSG     N    PCAACKLLRRRCA +C F+PYF    PHKF+SVHKVFGAS
Sbjct: 26  MAGIRRPMSGPPGTLN-TITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGAS 85

Query: 61  NVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQ 120
           NVSK+L E+PE QR+DA +S+VYEAN R+RDPVYGC+G IS LQQQV A   +L   +++
Sbjct: 86  NVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQAXXXELTAVRSE 145

Query: 121 LVQLK 126
           +++ K
Sbjct: 146 ILKYK 149

[Close]
BLAST of MELO3C012624.2 vs. TAIR10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 141.4 bits (355), Expect = 5.0e-34
Identity = 67/106 (63.21%), Postives = 81/106 (76.42%), Query Frame = 0 

Query: 16  NGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRS 75
           N   +PCAACK LRR+C   C+FAPYFP + PHKF++VHK+FGASNV+KLL EL   QR 
Sbjct: 6   NSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQRE 65

Query: 76  DAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQL 122
           DAV+S+ YEA AR+RDPVYGCVG IS LQ+QV  LQ++L    A L
Sbjct: 66  DAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADL 111

[Close]
BLAST of MELO3C012624.2 vs. Swiss-Prot
Match: sp|Q9SHE9|LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 5.1e-44
Identity = 89/123 (72.36%), Postives = 104/123 (84.55%), Query Frame = 0 

Query: 8   MSGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQ 67
           M  S +K  GAA+PCAACKLLRRRCA DCVF+PYFPAD P KF++VH+VFGASNV+K+LQ
Sbjct: 1   MKESSRK-QGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQ 60

Query: 68  ELPEQQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQLVQLKMG 127
           ELP  QR DAVSSMVYEANAR+RDPVYGCVG IS LQQQ+D LQ QLA+ QA++V L++ 
Sbjct: 61  ELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVR 120

Query: 128 QFT 131
           Q T
Sbjct: 121 QST 122

[Close]
BLAST of MELO3C012624.2 vs. Swiss-Prot
Match: sp|Q8LBW3|LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 166.4 bits (420), Expect = 2.6e-40
Identity = 78/112 (69.64%), Postives = 95/112 (84.82%), Query Frame = 0 

Query: 15  GNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQR 74
           G   ++PCA+CKLLRRRCA DC+FAPYFP D PHKF+ VHKVFGASNVSK+LQELP  QR
Sbjct: 2   GGPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQR 61

Query: 75  SDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQLVQLKM 127
           +DAV+S+V+EANAR+RDPVYGCVG IS LQ QV  LQ QLA+ QA+++ ++M
Sbjct: 62  ADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQM 113

[Close]
BLAST of MELO3C012624.2 vs. Swiss-Prot
Match: sp|Q9SA51|LBD3_ARATH (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-36
Identity = 74/107 (69.16%), Postives = 89/107 (83.18%), Query Frame = 0 

Query: 20  APCAACKLLRRRCAHD-CVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSDAV 79
           +PCA CKLLRR+C  D CVFAPYFPA  P+KF+ VHK+FGASNV+K+LQEL E  RSDAV
Sbjct: 13  SPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDAV 72

Query: 80  SSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQLVQLK 126
            SMVYEANARI+DPVYGCVGTIS L +Q++ LQ QLA  QA+L+ ++
Sbjct: 73  DSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIR 119

[Close]
BLAST of MELO3C012624.2 vs. Swiss-Prot
Match: sp|Q8L5T5|LBD15_ARATH (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 146.0 bits (367), Expect = 3.7e-34
Identity = 74/125 (59.20%), Postives = 91/125 (72.80%), Query Frame = 0 

Query: 1   MASSEMMMSGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGAS 60
           MA     MSG     N    PCAACKLLRRRCA +C F+PYF    PHKF+SVHKVFGAS
Sbjct: 26  MAGIRRPMSGPPGTLN-TITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGAS 85

Query: 61  NVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQ 120
           NVSK+L E+PE QR+DA +S+VYEAN R+RDPVYGC+G IS LQQQV A   +L   +++
Sbjct: 86  NVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQAXXXELTAVRSE 145

Query: 121 LVQLK 126
           +++ K
Sbjct: 146 ILKYK 149

[Close]
BLAST of MELO3C012624.2 vs. Swiss-Prot
Match: sp|Q9FML4|LOB_ARATH (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 9.0e-33
Identity = 67/106 (63.21%), Postives = 81/106 (76.42%), Query Frame = 0 

Query: 16  NGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRS 75
           N   +PCAACK LRR+C   C+FAPYFP + PHKF++VHK+FGASNV+KLL EL   QR 
Sbjct: 6   NSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQRE 65

Query: 76  DAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQL 122
           DAV+S+ YEA AR+RDPVYGCVG IS LQ+QV  LQ++L    A L
Sbjct: 66  DAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADL 111

[Close]
BLAST of MELO3C012624.2 vs. TrEMBL
Match: tr|A0A1S3BGP4|A0A1S3BGP4_CUCME (LOB domain-containing protein 4-like OS=Cucumis melo OX=3656 GN=LOC103489649 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 8.1e-71
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0 

Query: 1   MASSEMMMSGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGAS 60
           MASSEMMMSGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGAS
Sbjct: 1   MASSEMMMSGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGAS 60

Query: 61  NVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQ 120
           NVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQ
Sbjct: 61  NVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQ 120

Query: 121 LVQLKMGQFTXXXXXXXXXXXXXXXXXXINVAASSSLWSC 161
           LVQLKMGQFTXXXXXXXXXXXXXXXXXXINVAASSSLWSC
Sbjct: 121 LVQLKMGQFTXXXXXXXXXXXXXXXXXXINVAASSSLWSC 160

[Close]
BLAST of MELO3C012624.2 vs. TrEMBL
Match: tr|A0A0A0K5P4|A0A0A0K5P4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G237840 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 7.3e-56
Identity = 140/162 (86.42%), Postives = 141/162 (87.04%), Query Frame = 0 

Query: 1   MASSEM--MMSGSCKKGNGAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG 60
           MASSEM             AAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG
Sbjct: 1   MASSEMXXXXXXXXXXXXXAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFG 60

Query: 61  ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQ 120
           ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVG ISCLQQQVDALQQQLAITQ
Sbjct: 61  ASNVSKLLQELPEQQRSDAVSSMVYEANARIRDPVYGCVGAISCLQQQVDALQQQLAITQ 120

Query: 121 AQLVQLKMGQFTXXXXXXXXXXXXXXXXXXINVAASSSLWSC 161
           AQLVQ+KMGQFTXXXXXXXXXXXXXXXXXX       SLWSC
Sbjct: 121 AQLVQMKMGQFTXXXXXXXXXXXXXXXXXXXXXXXXXSLWSC 162

[Close]
BLAST of MELO3C012624.2 vs. TrEMBL
Match: tr|A5BKW9|A5BKW9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_19s0027g01120 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.8e-47
Identity = 94/114 (82.46%), Postives = 105/114 (92.11%), Query Frame = 0 

Query: 17  GAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSD 76
           GA +PCAACKLLRRRCA DCVFAPYFPAD PHKF+SVHKVFGASNV+K+LQELPE QRSD
Sbjct: 9   GAVSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEHQRSD 68

Query: 77  AVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQLVQLKMGQFT 131
           AVSSMVYEANAR+RDPVYGCVG IS LQQQ+DALQ QLA+ QA++VQ++M QFT
Sbjct: 69  AVSSMVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALVQAEVVQMRMNQFT 122

[Close]
BLAST of MELO3C012624.2 vs. TrEMBL
Match: tr|M5WHZ5|M5WHZ5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G138200 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.0e-46
Identity = 93/114 (81.58%), Postives = 104/114 (91.23%), Query Frame = 0 

Query: 17  GAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSD 76
           GA +PCAACKLLRRRCA DCVFAPYFPAD P KF+SVHKVFGASNV+K+LQELPE QRSD
Sbjct: 9   GAMSPCAACKLLRRRCAQDCVFAPYFPADEPQKFASVHKVFGASNVNKMLQELPEHQRSD 68

Query: 77  AVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQLVQLKMGQFT 131
           AVSSMVYEANAR+RDPVYGCVG IS LQQQ+DALQ QLAI QA++V ++MGQF+
Sbjct: 69  AVSSMVYEANARVRDPVYGCVGAISSLQQQIDALQTQLAIAQAEVVHMRMGQFS 122

[Close]
BLAST of MELO3C012624.2 vs. TrEMBL
Match: tr|M1AGH3|M1AGH3_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102583601 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.2e-45
Identity = 92/114 (80.70%), Postives = 103/114 (90.35%), Query Frame = 0 

Query: 17  GAAAPCAACKLLRRRCAHDCVFAPYFPADHPHKFSSVHKVFGASNVSKLLQELPEQQRSD 76
           GAA+PCAACKLLRRRCA DCVFAPYFPAD PHKF+SVHKVFGASNV+K+LQELPE QR D
Sbjct: 9   GAASPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEHQRGD 68

Query: 77  AVSSMVYEANARIRDPVYGCVGTISCLQQQVDALQQQLAITQAQLVQLKMGQFT 131
           AVSSMVYEANAR+RDPVYGCVG IS LQQQ+D LQ QLAI QA++V ++M QF+
Sbjct: 69  AVSSMVYEANARVRDPVYGCVGAISSLQQQIDNLQSQLAIAQAEVVHMRMRQFS 122

The following BLAST results are available for this feature:
BLAST of MELO3C012624.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008447124.11.2e-70100.00PREDICTED: LOB domain-containing protein 4-like [Cucumis melo][more]
XP_004139827.11.1e-5586.42PREDICTED: LOB domain-containing protein 4-like [Cucumis sativus] >KGN44269.1 hy... [more]
XP_022930643.19.7e-5285.48LOB domain-containing protein 4-like [Cucurbita moschata][more]
XP_023531527.12.2e-5184.68LOB domain-containing protein 4-like [Cucurbita pepo subsp. pepo][more]
XP_022969400.11.1e-4773.79LOB domain-containing protein 4-like [Cucurbita maxima][more]
BLAST of MELO3C012624.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G31320.12.8e-4572.36LOB domain-containing protein 4[more]
AT2G30130.11.4e-4169.64Lateral organ boundaries (LOB) domain family protein[more]
AT1G16530.17.4e-3869.16ASYMMETRIC LEAVES 2-like 9[more]
AT2G40470.12.0e-3559.20LOB domain-containing protein 15[more]
AT5G63090.25.0e-3463.21Lateral organ boundaries (LOB) domain family protein[more]
BLAST of MELO3C012624.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SHE9|LBD4_ARATH5.1e-4472.36LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=... [more]
sp|Q8LBW3|LBD12_ARATH2.6e-4069.64LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S... [more]
sp|Q9SA51|LBD3_ARATH1.3e-3669.16LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=... [more]
sp|Q8L5T5|LBD15_ARATH3.7e-3459.20LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S... [more]
sp|Q9FML4|LOB_ARATH9.0e-3363.21Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=... [more]
BLAST of MELO3C012624.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BGP4|A0A1S3BGP4_CUCME8.1e-71100.00LOB domain-containing protein 4-like OS=Cucumis melo OX=3656 GN=LOC103489649 PE=... [more]
tr|A0A0A0K5P4|A0A0A0K5P4_CUCSA7.3e-5686.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G237840 PE=4 SV=1[more]
tr|A5BKW9|A5BKW9_VITVI2.8e-4782.46Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_19s0027g01120 PE=4 SV=... [more]
tr|M5WHZ5|M5WHZ5_PRUPE4.0e-4681.58Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G138200 PE=4 SV=1[more]
tr|M1AGH3|M1AGH3_SOLTU1.2e-4580.70Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102583601 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0044036 cell wall macromolecule metabolic process
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0010014 meristem initiation
biological_process GO:0009944 polarity specification of adaxial/abaxial axis
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0010089 xylem development
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C012624.2.1MELO3C012624.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 100..120
NoneNo IPR availablePANTHERPTHR31301FAMILY NOT NAMEDcoord: 14..141
NoneNo IPR availablePANTHERPTHR31301:SF7LOB DOMAIN-CONTAINING PROTEIN 3-RELATEDcoord: 14..141
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 21..118
e-value: 2.6E-43
score: 146.5
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 20..121
score: 26.917

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C012624.2Csa6G139130Cucumber (Chinese Long) v2cumedB441
MELO3C012624.2Csa7G237840Cucumber (Chinese Long) v2cumedB512
MELO3C012624.2CSPI06G11240Wild cucumber (PI 183967)cpimedB449
MELO3C012624.2CSPI07G10760Wild cucumber (PI 183967)cpimedB526
MELO3C012624.2Cucsa.239660Cucumber (Gy14) v1cgymedB403
MELO3C012624.2Cucsa.118370Cucumber (Gy14) v1cgymedB179
MELO3C012624.2CmaCh19G010890Cucurbita maxima (Rimu)cmamedB537
MELO3C012624.2CmoCh11G020550Cucurbita moschata (Rifu)cmomedB098
MELO3C012624.2Lsi10G015250Bottle gourd (USVL1VR-Ls)lsimedB066
MELO3C012624.2Lsi11G016180Bottle gourd (USVL1VR-Ls)lsimedB097
MELO3C012624.2Cp4.1LG04g02270Cucurbita pepo (Zucchini)cpemedB723
MELO3C012624.2Cp4.1LG15g08800Cucurbita pepo (Zucchini)cpemedB264
MELO3C012624.2CsGy6G011360Cucumber (Gy14) v2cgybmedB399
MELO3C012624.2CsGy7G010110Cucumber (Gy14) v2cgybmedB468
MELO3C012624.2Cla005507Watermelon (97103) v1medwmB199
MELO3C012624.2Cla013469Watermelon (97103) v1medwmB241
MELO3C012624.2ClCG02G018540Watermelon (Charleston Gray)medwcgB198
MELO3C012624.2ClCG09G022590Watermelon (Charleston Gray)medwcgB174
MELO3C012624.2Cla97C02G044430Watermelon (97103) v2medwmbB172
MELO3C012624.2Cla97C09G184130Watermelon (97103) v2medwmbB213
MELO3C012624.2Bhi10G000748Wax gourdmedwgoB234
MELO3C012624.2Bhi05G001748Wax gourdmedwgoB214
MELO3C012624.2Carg15667Silver-seed gourdcarmedB0542
MELO3C012624.2Carg04675Silver-seed gourdcarmedB0398
MELO3C012624.2CsaV3_6G013670Cucumber (Chinese Long) v3cucmedB457
MELO3C012624.2CsaV3_7G022740Cucumber (Chinese Long) v3cucmedB539
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
MELO3C012624.2MELO3C035136.2Melon (DHL92) v3.6.1medmedB042
The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C012624.2Cucurbita maxima (Rimu)cmamedB109
MELO3C012624.2Cucurbita maxima (Rimu)cmamedB592
MELO3C012624.2Cucurbita moschata (Rifu)cmomedB524
MELO3C012624.2Cucurbita moschata (Rifu)cmomedB581
MELO3C012624.2Cucurbita pepo (Zucchini)cpemedB316
MELO3C012624.2Silver-seed gourdcarmedB0350